AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1258820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1258820 MtrunA17_Chr4g0058011 95.026 583 18 4 1 582 1 573 0.0 1043
Msa1258820 MtrunA17_Chr3g0116431 53.553 577 187 19 14 578 4 511 0.0 547
Msa1258820 MtrunA17_Chr7g0249221 37.097 372 190 10 240 581 27 384 4.43e-69 229
Msa1258820 MtrunA17_Chr5g0438891 37.888 322 167 12 240 546 36 339 1.25e-62 212
Msa1258820 MtrunA17_Chr2g0286151 34.006 347 181 10 240 546 44 382 7.61e-51 182
Msa1258820 MtrunA17_Chr1g0195891 33.022 321 169 12 233 520 39 346 1.92e-47 169
Msa1258820 MtrunA17_Chr1g0195891 41.880 117 65 1 467 580 91 207 7.31e-22 97.4
Msa1258820 MtrunA17_Chr8g0356241 30.641 359 151 9 224 542 174 474 3.00e-44 164
Msa1258820 MtrunA17_Chr8g0356241 34.946 186 75 5 240 379 309 494 9.34e-25 108
Msa1258820 MtrunA17_Chr8g0356241 48.780 82 37 1 462 543 185 261 1.40e-17 85.9
Msa1258820 MtrunA17_Chr4g0066941 32.335 334 180 11 240 542 43 361 9.11e-40 152
Msa1258820 MtrunA17_Chr4g0066941 56.579 76 31 1 467 542 332 405 2.94e-21 97.4
Msa1258820 MtrunA17_Chr4g0066941 40.777 103 53 1 467 569 88 182 6.60e-19 90.1
Msa1258820 MtrunA17_Chr4g0066941 45.833 72 39 0 291 362 334 405 9.36e-16 80.1
Msa1258820 MtrunA17_Chr4g0066941 39.506 81 48 1 465 545 41 120 9.68e-14 73.9
Msa1258820 MtrunA17_Chr4g0066941 37.363 91 46 2 233 320 325 407 6.34e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1258820 AT3G48440.1 58.308 331 125 8 221 541 90 417 4.43e-133 396
Msa1258820 AT3G48440.1 47.561 82 36 3 239 318 342 418 1.36e-14 76.6
Msa1258820 AT3G48440.1 29.268 164 62 5 466 581 106 263 2.82e-12 69.7
Msa1258820 AT5G63260.1 54.121 364 148 8 223 576 79 433 1.27e-124 374
Msa1258820 AT5G63260.2 52.116 378 150 8 223 576 79 449 3.99e-123 370
Msa1258820 AT3G02830.1 41.667 336 143 11 237 542 34 346 8.58e-72 236
Msa1258820 AT3G02830.1 44.118 102 56 1 467 567 82 183 1.66e-21 97.4
Msa1258820 AT3G02830.2 41.667 336 143 11 237 542 14 326 1.08e-71 235
Msa1258820 AT3G02830.2 44.118 102 56 1 467 567 62 163 1.47e-21 97.4
Msa1258820 AT5G16540.3 41.042 307 147 9 240 542 18 294 2.24e-66 220
Msa1258820 AT5G16540.3 39.474 114 56 1 467 567 63 176 4.03e-19 89.7
Msa1258820 AT5G16540.3 41.250 80 42 2 239 317 62 137 5.24e-12 68.2
Msa1258820 AT5G16540.1 41.042 307 147 9 240 542 39 315 2.65e-66 221
Msa1258820 AT5G16540.1 39.474 114 56 1 467 567 84 197 4.11e-19 90.1
Msa1258820 AT5G16540.1 41.250 80 42 2 239 317 83 158 5.02e-12 68.2
Msa1258820 AT3G06410.1 38.209 335 167 9 240 541 51 378 4.93e-65 220
Msa1258820 AT3G06410.1 49.367 79 38 1 466 542 96 174 2.44e-17 85.5
Msa1258820 AT3G06410.1 41.772 79 46 0 465 543 49 127 4.44e-15 78.2
Msa1258820 AT3G06410.1 33.333 93 58 2 226 317 289 378 1.75e-11 67.0
Msa1258820 AT2G47850.1 39.053 338 169 12 236 546 38 365 3.02e-63 215
Msa1258820 AT2G47850.3 39.053 338 169 12 236 546 38 365 3.02e-63 215
Msa1258820 AT5G18550.1 37.764 331 169 10 240 541 48 370 1.58e-62 213
Msa1258820 AT5G18550.1 40.179 112 50 2 467 561 94 205 6.66e-18 87.0
Msa1258820 AT5G18550.1 44.872 78 43 0 465 542 46 123 7.37e-17 84.0
Msa1258820 AT5G18550.4 37.764 331 169 10 240 541 48 370 2.46e-62 213
Msa1258820 AT5G18550.4 40.179 112 50 2 467 561 94 205 8.03e-18 86.7
Msa1258820 AT5G18550.4 44.304 79 44 0 465 543 46 124 9.08e-17 83.6
Msa1258820 AT5G18550.3 37.764 331 169 10 240 541 16 338 3.33e-62 212
Msa1258820 AT5G18550.3 40.179 112 50 2 467 561 62 173 1.22e-17 86.3
Msa1258820 AT5G18550.3 44.304 79 44 0 465 543 14 92 1.34e-16 82.8
Msa1258820 AT1G04990.1 36.420 324 169 11 240 553 44 340 8.56e-60 204
Msa1258820 AT1G04990.6 36.420 324 169 11 240 553 44 340 8.56e-60 204
Msa1258820 AT1G04990.2 36.420 324 169 11 240 553 44 340 8.56e-60 204
Msa1258820 AT5G16540.2 40.065 307 143 11 240 542 39 308 2.45e-59 202
Msa1258820 AT5G16540.2 39.474 114 56 1 467 567 84 197 3.06e-19 90.1
Msa1258820 AT5G16540.2 41.250 80 42 2 239 317 83 158 5.00e-12 68.2
Msa1258820 AT5G18550.2 35.542 332 162 11 240 541 48 357 3.60e-56 196
Msa1258820 AT5G18550.2 40.179 112 50 2 467 561 94 205 5.67e-18 87.4
Msa1258820 AT5G18550.2 44.872 78 43 0 465 542 46 123 6.60e-17 84.0
Msa1258820 AT2G32930.2 35.435 333 179 11 240 557 41 352 6.40e-54 190
Msa1258820 AT2G32930.3 35.962 317 167 11 240 541 14 309 7.30e-54 189
Msa1258820 AT5G16540.4 38.652 282 139 9 240 517 18 269 3.54e-51 177
Msa1258820 AT5G16540.4 39.474 114 56 1 467 567 63 176 1.65e-19 89.4
Msa1258820 AT5G16540.4 41.250 80 42 2 239 317 62 137 3.69e-12 67.4
Msa1258820 AT1G04990.5 34.259 324 156 12 240 553 44 320 4.20e-51 181
Msa1258820 AT2G32930.1 35.135 333 176 12 240 557 41 348 1.79e-50 181
Msa1258820 AT2G47850.2 35.562 329 167 12 236 546 38 339 8.18e-47 170
Msa1258820 AT1G04990.3 36.431 269 140 10 295 553 12 259 6.11e-45 162
Msa1258820 AT1G04990.3 41.333 75 42 1 290 362 178 252 2.95e-11 65.5
Msa1258820 AT3G12680.1 30.678 339 140 8 239 542 221 499 5.44e-43 161
Msa1258820 AT3G12680.1 33.333 174 76 3 240 373 337 510 6.32e-24 106
Msa1258820 AT3G12680.1 30.508 236 98 5 334 543 172 367 9.41e-23 102
Msa1258820 AT3G12680.1 28.879 232 104 6 219 389 242 473 3.66e-22 100
Msa1258820 AT2G47850.4 40.164 244 115 10 328 546 6 243 9.02e-40 149
Msa1258820 AT2G47850.4 41.463 82 46 1 283 362 158 239 2.16e-16 81.3
Msa1258820 AT2G47850.4 40.244 82 44 2 240 320 164 241 2.54e-12 68.9
Msa1258820 AT1G04990.4 33.829 269 127 11 295 553 12 239 2.89e-36 137
Msa1258820 AT1G48195.1 64.935 77 27 0 465 541 4 80 1.17e-32 120
Msa1258820 AT1G48195.1 43.836 73 39 1 291 361 8 80 7.54e-14 67.4

Find 218 sgRNAs with CRISPR-Local

Find 346 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTATGGAATTTGCAAATT+TGG 0.102331 8_2:-60093884 Msa1258820:CDS
TCAGGTTCACCAGGCCTTTC+TGG 0.111248 8_2:+60094272 None:intergenic
GATTGATTATCTGTTATTTC+TGG 0.157583 8_2:-60093512 Msa1258820:three_prime_UTR
TATGGTTATGGTGCTGGATA+TGG 0.203377 8_2:-60096742 Msa1258820:CDS
TGAAAATGAAGAACCTATTA+AGG 0.216671 8_2:-60096929 Msa1258820:CDS
TGCAGTTTCTTCATTAAAAC+TGG 0.219867 8_2:-60094248 Msa1258820:CDS
ATCTCTTATGTATTTATTAC+AGG 0.225819 8_2:-60093552 Msa1258820:three_prime_UTR
ATTAGGGGAAGTGCGCTTTC+TGG 0.242070 8_2:+60093839 None:intergenic
GTCTGGCCTGCGTTCTCTTC+TGG 0.244151 8_2:+60095714 None:intergenic
AGTTAAATGCTTCTGCCATT+TGG 0.251143 8_2:-60093289 Msa1258820:three_prime_UTR
GAAAATAAATAACCTGGTTT+TGG 0.252801 8_2:+60096545 None:intergenic
GATGGTGGTGGTGCTGGTTA+TGG 0.256446 8_2:-60096760 Msa1258820:CDS
ATCCATTCCAATCAGAAGTT+TGG 0.261285 8_2:+60094617 None:intergenic
AGAGCCAGTGCGCATGTAAT+AGG 0.276877 8_2:+60094843 None:intergenic
AACTTTGCAACCCGATTCTT+TGG 0.276880 8_2:+60094188 None:intergenic
AAATAAAATGTATCATGTTT+AGG 0.287634 8_2:+60093647 None:intergenic
CGCACTGGCTCTTGTAAGTT+TGG 0.291837 8_2:-60094832 Msa1258820:CDS
TAAACATTTGTTTCAATAGT+TGG 0.292535 8_2:+60094332 None:intergenic
TCTGTTATTTCTGGTTCCTT+TGG 0.294201 8_2:-60093503 Msa1258820:three_prime_UTR
AGAAAGTTAAGTTCTGAAAT+TGG 0.306141 8_2:+60094997 None:intergenic
GGTGGTGATGGTGGTGGTGC+TGG 0.307134 8_2:-60096766 Msa1258820:CDS
GAGCCAGTGCGCATGTAATA+GGG 0.307860 8_2:+60094844 None:intergenic
TCCATTCCAATCAGAAGTTT+GGG 0.314436 8_2:+60094618 None:intergenic
GTTAAATGCTTCTGCCATTT+GGG 0.327957 8_2:-60093288 Msa1258820:three_prime_UTR
GGTGGTGCTGGTTATGGTTA+TGG 0.330911 8_2:-60096754 Msa1258820:CDS
AAGACTGGGAGTTGCAAGTT+TGG 0.332151 8_2:-60096607 Msa1258820:CDS
GTTATGGAATTTGCAAATTT+GGG 0.333323 8_2:-60093883 Msa1258820:CDS
GCTGGATATGGGGATGGTTA+TGG 0.336846 8_2:-60096730 Msa1258820:CDS
CTGAAATTGATGATAAAGTT+TGG 0.348600 8_2:-60097095 Msa1258820:CDS
GCAAATTTAATCACCCCATT+AGG 0.348706 8_2:-60096576 Msa1258820:CDS
TGGGGTTATGGTGGTGGTGA+TGG 0.352887 8_2:-60096778 Msa1258820:CDS
AAAATCAATTTCTGCTACTA+GGG 0.354485 8_2:-60097408 Msa1258820:five_prime_UTR
GACTACAAATGCAGGCTGTT+AGG 0.359180 8_2:-60095761 Msa1258820:intron
AGGTCTGGAGGTTGTAAGTT+TGG 0.359978 8_2:-60095060 Msa1258820:CDS
GGTTATGGTGGTGGTGATGG+TGG 0.363462 8_2:-60096775 Msa1258820:CDS
TTCTGATTGGAATGGATATC+AGG 0.365728 8_2:-60094611 Msa1258820:intron
AATGAACAATCTTCAGCTTC+AGG 0.368842 8_2:+60096637 None:intergenic
ATTTCAGAACTTAACTTTCT+CGG 0.371138 8_2:-60094994 Msa1258820:CDS
TTAATGAAGAAACTGCATTC+AGG 0.373181 8_2:+60094254 None:intergenic
ATGGTTATGGTGCTGGATAT+GGG 0.374104 8_2:-60096741 Msa1258820:CDS
GTCCGAGTCCAGGCATCATT+AGG 0.374587 8_2:+60093822 None:intergenic
TCCTTTGGATTAAAGTTAAC+CGG 0.374927 8_2:-60093488 Msa1258820:three_prime_UTR
GATGGTTATGGTGACGGTTA+TGG 0.377832 8_2:-60096718 Msa1258820:CDS
TGGTAGAGATGCTGATGATT+GGG 0.379055 8_2:-60096797 Msa1258820:CDS
TGGATTAAAGTTAACCGGTT+TGG 0.379816 8_2:-60093483 Msa1258820:three_prime_UTR
TCCGAGTCCAGGCATCATTA+GGG 0.386170 8_2:+60093823 None:intergenic
GTGGTAGAGATGCTGATGAT+TGG 0.386802 8_2:-60096798 Msa1258820:CDS
TTAGGGGAAGTGCGCTTTCT+GGG 0.387787 8_2:+60093840 None:intergenic
TGCTCACACTATAGTCGTTA+TGG 0.390378 8_2:-60093899 Msa1258820:CDS
TTGCACTATGCACCGGCTAT+TGG 0.391636 8_2:+60093365 None:intergenic
GATGCTGATGATTGGGGTTA+TGG 0.395182 8_2:-60096790 Msa1258820:CDS
ACTACAAATGCAGGCTGTTA+GGG 0.405099 8_2:-60095760 Msa1258820:intron
AAACATTTGTTTCAATAGTT+GGG 0.406762 8_2:+60094333 None:intergenic
TTGCTCCCCAAACTTCTGAT+TGG 0.407376 8_2:-60094624 Msa1258820:CDS
TGAAAATGAAGAATTTGTTA+AGG 0.408488 8_2:-60096905 Msa1258820:CDS
TCAGATCCTCCGACAGTTGT+AGG 0.410518 8_2:+60094781 None:intergenic
AGAACCCAGTTGGGGTTCTT+CGG 0.410763 8_2:+60097320 None:intergenic
TCAGCTAATGCTCAGGTGGC+TGG 0.413776 8_2:-60093782 Msa1258820:CDS
TATGGTGGTGGTGATGGTGG+TGG 0.414901 8_2:-60096772 Msa1258820:CDS
AATGCTCAGGTGGCTGGGAT+GGG 0.415592 8_2:-60093776 Msa1258820:CDS
AATTTCACCATCCAAAGAAT+CGG 0.420180 8_2:-60094199 Msa1258820:CDS
CAACGCCGAAGAACCCCAAC+TGG 0.420728 8_2:-60097325 Msa1258820:CDS
GGAAAGAGTAGCAGCTAAAT+CGG 0.425286 8_2:+60097347 None:intergenic
GAACTCATCAATTCCCTTTG+AGG 0.425644 8_2:-60096660 Msa1258820:CDS
TCATGAGAAGTTGGATTTGA+AGG 0.428949 8_2:-60097199 Msa1258820:CDS
TAATGCTCAGGTGGCTGGGA+TGG 0.429440 8_2:-60093777 Msa1258820:CDS
TTTAACCTCAGAACCCAGTT+GGG 0.437728 8_2:+60097311 None:intergenic
GTCGGAGGATCTGATCAATC+AGG 0.439856 8_2:-60094772 Msa1258820:CDS
CCGGCTATTGGTGGTAGTAC+TGG 0.442998 8_2:+60093377 None:intergenic
ATAAGTTGTACCAGACGAAT+AGG 0.451170 8_2:+60094967 None:intergenic
GATGATTGGGGTTATGGTGG+TGG 0.453539 8_2:-60096784 Msa1258820:CDS
TTTGAAATGTGGAGGGAGAA+TGG 0.455545 8_2:-60097385 Msa1258820:exon
GAAAATGAAGAATTTGTTAA+GGG 0.456582 8_2:-60096904 Msa1258820:CDS
CGTTTGAAGTGTTTCCAGAA+AGG 0.459964 8_2:-60094286 Msa1258820:CDS
TGGCAGTATTATCAAAGGTC+TGG 0.460554 8_2:-60095075 Msa1258820:intron
CATTTCACACACACTGCCCC+TGG 0.460590 8_2:-60097544 Msa1258820:five_prime_UTR
CTGCAGGGAAACGAGTGAAT+GGG 0.466298 8_2:+60093310 None:intergenic
GCTGGTTATGGTTATGGTGC+TGG 0.466326 8_2:-60096748 Msa1258820:CDS
TCTCGGCTTACCTATTCGTC+TGG 0.469076 8_2:-60094977 Msa1258820:intron
TTTAAACTTCAAAACTCCAT+TGG 0.471019 8_2:+60093425 None:intergenic
TCTTCAGCTTCAGGCCTCAA+AGG 0.471838 8_2:+60096646 None:intergenic
GAAGAAAGGGTTGATGTTGA+TGG 0.473079 8_2:-60096880 Msa1258820:CDS
CCTCCGACAGTTGTAGGATC+AGG 0.473817 8_2:+60094787 None:intergenic
TGAGTAGGCGTAGGCATCAA+TGG 0.474024 8_2:+60094652 None:intergenic
ATTTCACCATCCAAAGAATC+GGG 0.474319 8_2:-60094198 Msa1258820:CDS
CTTTCTGGAAACACTTCAAA+CGG 0.476293 8_2:+60094287 None:intergenic
TGCTACTAGGGTTTGAAATG+TGG 0.477590 8_2:-60097396 Msa1258820:five_prime_UTR
GCTCAGGTGGCTGGGATGGG+TGG 0.478265 8_2:-60093773 Msa1258820:CDS
TCATATGCATATTCTTCAGC+AGG 0.479908 8_2:-60093259 Msa1258820:three_prime_UTR
ACTGCAGGGAAACGAGTGAA+TGG 0.486829 8_2:+60093309 None:intergenic
GCTGATGATTGGGGTTATGG+TGG 0.488921 8_2:-60096787 Msa1258820:CDS
GATCAATCAGGGTATGGTAA+TGG 0.497131 8_2:-60094760 Msa1258820:CDS
CAATAACCTTGCATTCTGTC+TGG 0.497455 8_2:+60095697 None:intergenic
GTGGAGTAGTTTCTGATGAA+AGG 0.500681 8_2:-60097122 Msa1258820:CDS
ATTTGTTAAGGGTGAAGAAA+GGG 0.502299 8_2:-60096893 Msa1258820:CDS
GAAAATGAAGAACCTATTAA+GGG 0.504187 8_2:-60096928 Msa1258820:CDS
CATGATCCTCTCTGATAAGT+AGG 0.504294 8_2:+60094385 None:intergenic
GCATATGAATATGACCCAAA+TGG 0.509009 8_2:+60093274 None:intergenic
AGAATCTCTGAAGGGTGAAA+AGG 0.509352 8_2:-60096977 Msa1258820:CDS
TGGCAGAAGCATTTAACTGC+AGG 0.509551 8_2:+60093294 None:intergenic
CTTCAGCTTCAGGCCTCAAA+GGG 0.509655 8_2:+60096647 None:intergenic
CACTATGCACCGGCTATTGG+TGG 0.510349 8_2:+60093368 None:intergenic
AAGGTTGGGATACTAATAGT+TGG 0.510691 8_2:-60096849 Msa1258820:CDS
AAGGCAGGCCCTTGTCACTA+AGG 0.511305 8_2:+60094153 None:intergenic
CAGCTAATGCTCAGGTGGCT+GGG 0.512237 8_2:-60093781 Msa1258820:CDS
AATTTGTTAAGGGTGAAGAA+AGG 0.513417 8_2:-60096894 Msa1258820:CDS
CCCCTAATGATGCCTGGACT+CGG 0.513603 8_2:-60093824 Msa1258820:CDS
TTGCAACCCGATTCTTTGGA+TGG 0.514387 8_2:+60094192 None:intergenic
TATGGTGACGGTTATGGCTA+TGG 0.516935 8_2:-60096712 Msa1258820:CDS
TGTAAGTACAACCACTCAAG+AGG 0.517355 8_2:-60095030 Msa1258820:CDS
TGAACGAGTTGGAGATGAAA+GGG 0.517944 8_2:-60097058 Msa1258820:CDS
AACTTACAGGTCTCAAAGGC+AGG 0.518963 8_2:+60094138 None:intergenic
GATTTGAAGGTTGAAGATGA+AGG 0.520640 8_2:-60097186 Msa1258820:CDS
TGATGGAGACAGCAAAGGTT+GGG 0.522384 8_2:-60096863 Msa1258820:CDS
GTTTCGAACTTTAACGATGG+TGG 0.522618 8_2:-60097141 Msa1258820:CDS
TGGTTATGGTGCTGGATATG+GGG 0.523147 8_2:-60096740 Msa1258820:CDS
GTAGGCATCAATGGAGCAAA+AGG 0.524117 8_2:+60094661 None:intergenic
TGCAAACTCAGCTAATGCTC+AGG 0.524400 8_2:-60093789 Msa1258820:CDS
ATTTGAAGGTTGAAGATGAA+GGG 0.526983 8_2:-60097185 Msa1258820:CDS
TAGGATTGTTGTCCGAGTCC+AGG 0.528151 8_2:+60093812 None:intergenic
TTCATGACATAAGTAGAAGA+TGG 0.528240 8_2:+60094359 None:intergenic
CCCCAAACTTCTGATTGGAA+TGG 0.532005 8_2:-60094619 Msa1258820:CDS
AATTTAATCACCCCATTAGG+AGG 0.533115 8_2:-60096573 Msa1258820:CDS
GAAGAAGACCATGAGGCGAC+AGG 0.533137 8_2:+60094703 None:intergenic
TTGATGGAGACAGCAAAGGT+TGG 0.534457 8_2:-60096864 Msa1258820:CDS
TGGAGTAGTTTCTGATGAAA+GGG 0.537907 8_2:-60097121 Msa1258820:CDS
ACCGTCAGATCTCAATCAAA+CGG 0.540872 8_2:-60097256 Msa1258820:CDS
ACCGGTTAACTTTAATCCAA+AGG 0.541994 8_2:+60093487 None:intergenic
GGTGGAGAATGATGATCAAC+TGG 0.542231 8_2:+60097276 None:intergenic
ACATTCACAACCATCCAAAC+CGG 0.544256 8_2:+60093469 None:intergenic
TGATACACCTCGTAGTGAAA+CGG 0.547266 8_2:+60094732 None:intergenic
TTATATGGGGAATCAGCAAA+GGG 0.549637 8_2:+60097511 None:intergenic
TTTATATGGGGAATCAGCAA+AGG 0.550047 8_2:+60097510 None:intergenic
AAAATCATTGCACTATGCAC+CGG 0.550723 8_2:+60093358 None:intergenic
CACAACAACCTGTCGCCTCA+TGG 0.551262 8_2:-60094711 Msa1258820:CDS
TCTTGTTCAACAGTTGCCAA+TGG 0.551816 8_2:-60093441 Msa1258820:three_prime_UTR
GTTTAACCTCAGAACCCAGT+TGG 0.552636 8_2:+60097310 None:intergenic
TTTAACGATGGTGAACGAGT+TGG 0.552952 8_2:-60097069 Msa1258820:CDS
GTGAACGAGTTGGAGATGAA+AGG 0.554304 8_2:-60097059 Msa1258820:CDS
GCACTTCCCCTAATGATGCC+TGG 0.554943 8_2:-60093830 Msa1258820:CDS
CAATCAGGGTATGGTAATGG+AGG 0.554965 8_2:-60094757 Msa1258820:CDS
GGATCTGATCAATCAGGGTA+TGG 0.555471 8_2:-60094766 Msa1258820:CDS
TGTGGAGCTTCATGAGAAGT+TGG 0.556036 8_2:-60097208 Msa1258820:CDS
TTAAAGTTAACCGGTTTGGA+TGG 0.556394 8_2:-60093479 Msa1258820:three_prime_UTR
ATCCTCTCTGATAAGTAGGC+AGG 0.557199 8_2:+60094389 None:intergenic
TGGTATGGCAGTATTATCAA+AGG 0.558128 8_2:-60095080 Msa1258820:intron
TATGGTGCTGGATATGGGGA+TGG 0.558685 8_2:-60096736 Msa1258820:CDS
GTAAGTTTGGATCGAACTGT+AGG 0.559636 8_2:-60094819 Msa1258820:CDS
GCAAAGGGAGTGAAGAAACC+AGG 0.560231 8_2:+60097526 None:intergenic
AAAGTTTGGAACTTTAACGA+TGG 0.565585 8_2:-60097081 Msa1258820:CDS
AAAGTTTCGAACTTTAACGA+TGG 0.565585 8_2:-60097144 Msa1258820:CDS
CATCCTGATCCTACAACTGT+CGG 0.566670 8_2:-60094790 Msa1258820:CDS
AAGGAAGAGAAAAGCAGCGA+TGG 0.568512 8_2:-60096682 Msa1258820:CDS
GAGAATGTGAATGAAGAGCT+TGG 0.570679 8_2:-60096823 Msa1258820:CDS
TACTAGGGTTTGAAATGTGG+AGG 0.571004 8_2:-60097393 Msa1258820:five_prime_UTR
GTGCTGTGAACCCTCTTGAG+TGG 0.572535 8_2:+60095019 None:intergenic
GCAGTTTCTTCATTAAAACT+GGG 0.573129 8_2:-60094247 Msa1258820:CDS
TGCCCCTATTACATGCGCAC+TGG 0.574720 8_2:-60094847 Msa1258820:CDS
GGGTGGTCAAATCTACAAGC+TGG 0.574834 8_2:+60093860 None:intergenic
CGCAGGCCAGACAGAATGCA+AGG 0.576542 8_2:-60095703 Msa1258820:intron
GAAGAACCAGAAGAGAACGC+AGG 0.577511 8_2:-60095720 Msa1258820:CDS
GTGAATGAAGAGCTTGGTGG+TGG 0.580195 8_2:-60096817 Msa1258820:CDS
CCCTTGTCACTAAGGTTGCA+AGG 0.581869 8_2:+60094161 None:intergenic
AAACTGCATTCAGGTTCACC+AGG 0.584269 8_2:+60094263 None:intergenic
GGTAGAGATGCTGATGATTG+GGG 0.586505 8_2:-60096796 Msa1258820:CDS
GATGAAGAAGAATCTGTTGT+GGG 0.587703 8_2:-60096952 Msa1258820:CDS
ACCGTTTGATTGAGATCTGA+CGG 0.592753 8_2:+60097255 None:intergenic
AATGCAGGCTGTTAGGGAGA+AGG 0.594662 8_2:-60095754 Msa1258820:intron
GAATGATGATGAACTTGCTG+TGG 0.596550 8_2:-60097226 Msa1258820:CDS
GGCAGAAGCATTTAACTGCA+GGG 0.596593 8_2:+60093295 None:intergenic
AGCATTAGCTGAGTTTGCAT+AGG 0.596874 8_2:+60093793 None:intergenic
AGCCAGTGCGCATGTAATAG+GGG 0.597843 8_2:+60094845 None:intergenic
TCCTTGCAACCTTAGTGACA+AGG 0.599462 8_2:-60094162 Msa1258820:CDS
TATAGTGTGAGCAGACACTC+TGG 0.600374 8_2:+60093909 None:intergenic
AGAAAGTGCTTAAATTTGTG+TGG 0.600900 8_2:-60093229 Msa1258820:three_prime_UTR
CAGTTTCTTCATTAAAACTG+GGG 0.603026 8_2:-60094246 Msa1258820:CDS
TTTGATGATGGCGAACGAGT+TGG 0.603613 8_2:-60097006 Msa1258820:CDS
TATGGGGATGGTTATGGTGA+CGG 0.605000 8_2:-60096724 Msa1258820:CDS
GCATAACTTACAGGTCTCAA+AGG 0.605332 8_2:+60094134 None:intergenic
GAAGTGTTTCCAGAAAGGCC+TGG 0.609811 8_2:-60094281 Msa1258820:CDS
TGGGGAGCAAGTCCTTGAGT+AGG 0.610371 8_2:+60094637 None:intergenic
AGAACCCCAACTGGGTTCTG+AGG 0.610891 8_2:-60097316 Msa1258820:CDS
CAGTATTATCAAAGGTCTGG+AGG 0.612968 8_2:-60095072 Msa1258820:CDS
TGGTGATGAAGAATCTCTGA+AGG 0.613878 8_2:-60096986 Msa1258820:CDS
CTGTCTAAAAGCCTTTGTCA+AGG 0.619448 8_2:-60093721 Msa1258820:exon
TTATGGCTATGGTGATGAGA+AGG 0.619525 8_2:-60096701 Msa1258820:CDS
TCGGAGGATCTGATCAATCA+GGG 0.622808 8_2:-60094771 Msa1258820:CDS
CCAGTACTACCACCAATAGC+CGG 0.624712 8_2:-60093377 Msa1258820:three_prime_UTR
GCAAGTCCTTGAGTAGGCGT+AGG 0.625756 8_2:+60094643 None:intergenic
AAACTCAGCTAATGCTCAGG+TGG 0.626361 8_2:-60093786 Msa1258820:CDS
TGCAGGGAAACGAGTGAATG+GGG 0.626400 8_2:+60093311 None:intergenic
TTGATGCCTACGCCTACTCA+AGG 0.631915 8_2:-60094649 Msa1258820:CDS
TTAACCTCAGAACCCAGTTG+GGG 0.635369 8_2:+60097312 None:intergenic
TTTGAAGGTTGAAGATGAAG+GGG 0.641813 8_2:-60097184 Msa1258820:CDS
CAAAGGGAGTGAAGAAACCA+GGG 0.641898 8_2:+60097527 None:intergenic
CCGAGTCCAGGCATCATTAG+GGG 0.648980 8_2:+60093824 None:intergenic
ACTAGGGTTTGAAATGTGGA+GGG 0.650876 8_2:-60097392 Msa1258820:five_prime_UTR
AGATAGAAGATCCTTGACAA+AGG 0.653962 8_2:+60093710 None:intergenic
CCTTGCAACCTTAGTGACAA+GGG 0.655446 8_2:-60094161 Msa1258820:CDS
AATCAGGGTATGGTAATGGA+GGG 0.663608 8_2:-60094756 Msa1258820:CDS
AGATGAAGAAGAATCTGTTG+TGG 0.664765 8_2:-60096953 Msa1258820:CDS
AACGCCGAAGAACCCCAACT+GGG 0.666568 8_2:-60097324 Msa1258820:CDS
AAAGGGAGTGAAGAAACCAG+GGG 0.669089 8_2:+60097528 None:intergenic
GTAAGTACAACCACTCAAGA+GGG 0.671707 8_2:-60095029 Msa1258820:CDS
CTTTCTTGAAGAAGACCATG+AGG 0.682349 8_2:+60094696 None:intergenic
GGAGGGTCCGTTTCACTACG+AGG 0.682956 8_2:-60094739 Msa1258820:CDS
AGAAAGATCACACACTCACG+CGG 0.685340 8_2:+60097451 None:intergenic
GATGTTGATGGAGACAGCAA+AGG 0.687704 8_2:-60096868 Msa1258820:CDS
CCATTCCAATCAGAAGTTTG+GGG 0.688247 8_2:+60094619 None:intergenic
CACCTGCCTACTTATCAGAG+AGG 0.690749 8_2:-60094391 Msa1258820:CDS
GTGGTAGTACTGGTTAGACA+CGG 0.703362 8_2:+60093387 None:intergenic
CCTGATCCTACAACTGTCGG+AGG 0.708304 8_2:-60094787 Msa1258820:CDS
GGAGTAGTTTCTGATGAAAG+GGG 0.714886 8_2:-60097120 Msa1258820:CDS
GAACGAGTTGGAGATGAAAG+GGG 0.725208 8_2:-60097057 Msa1258820:CDS
AATGTGAATGAAGAGCTTGG+TGG 0.733698 8_2:-60096820 Msa1258820:CDS
GTTTGATTGAGATCTGACGG+TGG 0.735022 8_2:+60097258 None:intergenic
GGTGATGAAGAATCTCTGAA+GGG 0.735452 8_2:-60096985 Msa1258820:CDS
TTGTCACTAAGGTTGCAAGG+AGG 0.772375 8_2:+60094164 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTGATTTTTATCTTT+TGG - chr8_2:60095619-60095638 Msa1258820:intron 10.0%
!!! TACATTTTATTTTAACTTTA+TGG - chr8_2:60097083-60097102 Msa1258820:CDS 10.0%
!!! AAATATTCTTTTCTTTGTTT+TGG - chr8_2:60094929-60094948 Msa1258820:intron 15.0%
!! AAATAAAATGTATCATGTTT+AGG + chr8_2:60097075-60097094 None:intergenic 15.0%
!!! AGAAAAAAGGTTTTTATATG+GGG + chr8_2:60093224-60093243 None:intergenic 20.0%
!!! GAGAAAAAAGGTTTTTATAT+GGG + chr8_2:60093225-60093244 None:intergenic 20.0%
!!! TGAGAAAAAAGGTTTTTATA+TGG + chr8_2:60093226-60093245 None:intergenic 20.0%
!! TAACAAAAAAGTGAGAAAAA+AGG + chr8_2:60093237-60093256 None:intergenic 20.0%
!!! TGAAAATGAAGAATTTGTTA+AGG - chr8_2:60093814-60093833 Msa1258820:CDS 20.0%
!!! GAAAATGAAGAATTTGTTAA+GGG - chr8_2:60093815-60093834 Msa1258820:CDS 20.0%
!! TATGACATTGTTGAAATTTA+AGG - chr8_2:60094276-60094295 Msa1258820:CDS 20.0%
!! AAAAATCACAATTCAACATT+AGG + chr8_2:60094429-60094448 None:intergenic 20.0%
!!! TAATGTTGAATTGTGATTTT+TGG - chr8_2:60094428-60094447 Msa1258820:intron 20.0%
!!! CCATTTTTTCAAATTATTAC+GGG + chr8_2:60094533-60094552 None:intergenic 20.0%
!!! GCCATTTTTTCAAATTATTA+CGG + chr8_2:60094534-60094553 None:intergenic 20.0%
!! ATTCCTTGATTAATAATTAC+TGG - chr8_2:60095361-60095380 Msa1258820:intron 20.0%
!!! TTGATTTTTATCTTTTGGTA+TGG - chr8_2:60095624-60095643 Msa1258820:intron 20.0%
!! GATATTATATATCTTCTCAA+TGG + chr8_2:60095780-60095799 None:intergenic 20.0%
!!! TTTAAAATGTTTTGTGTTAC+AGG - chr8_2:60095838-60095857 Msa1258820:intron 20.0%
!!! TTAAAATGTTTTGTGTTACA+GGG - chr8_2:60095839-60095858 Msa1258820:intron 20.0%
!! AAACATTTGTTTCAATAGTT+GGG + chr8_2:60096389-60096408 None:intergenic 20.0%
!! TAAACATTTGTTTCAATAGT+TGG + chr8_2:60096390-60096409 None:intergenic 20.0%
!!! ATCTTTAAAAGATAATTGAC+AGG - chr8_2:60096629-60096648 Msa1258820:CDS 20.0%
!!! TCTTTAAAAGATAATTGACA+GGG - chr8_2:60096630-60096649 Msa1258820:CDS 20.0%
!!! AGTTTTTTTTTGAAGTAGAT+TGG - chr8_2:60096743-60096762 Msa1258820:CDS 20.0%
!!! TTTTATTTGTCTTTAAATCC+AGG - chr8_2:60096786-60096805 Msa1258820:CDS 20.0%
!! ATCTCTTATGTATTTATTAC+AGG - chr8_2:60097167-60097186 Msa1258820:CDS 20.0%
! AAAAATCAATTTCTGCTACT+AGG - chr8_2:60093310-60093329 Msa1258820:three_prime_UTR 25.0%
! AAAATCAATTTCTGCTACTA+GGG - chr8_2:60093311-60093330 Msa1258820:three_prime_UTR 25.0%
!! CTGAAATTGATGATAAAGTT+TGG - chr8_2:60093624-60093643 Msa1258820:three_prime_UTR 25.0%
!!! AAAGTTTTGAACTTTGATGA+TGG - chr8_2:60093701-60093720 Msa1258820:three_prime_UTR 25.0%
! TGAAAATGAAGAACCTATTA+AGG - chr8_2:60093790-60093809 Msa1258820:CDS 25.0%
! GAAAATGAAGAACCTATTAA+GGG - chr8_2:60093791-60093810 Msa1258820:CDS 25.0%
!! TGTTCATTTTATATGAAGAC+TGG - chr8_2:60094097-60094116 Msa1258820:intron 25.0%
!! GTTCATTTTATATGAAGACT+GGG - chr8_2:60094098-60094117 Msa1258820:intron 25.0%
!! GAAAATAAATAACCTGGTTT+TGG + chr8_2:60094177-60094196 None:intergenic 25.0%
! GAAAGAGAAAATAAATAACC+TGG + chr8_2:60094183-60094202 None:intergenic 25.0%
! TCAACAATGTCATATCTAAA+GGG + chr8_2:60094270-60094289 None:intergenic 25.0%
! TTCAACAATGTCATATCTAA+AGG + chr8_2:60094271-60094290 None:intergenic 25.0%
!!! CTGAATGTAGTATTTTTGAT+TGG - chr8_2:60094364-60094383 Msa1258820:CDS 25.0%
! CCCGTAATAATTTGAAAAAA+TGG - chr8_2:60094530-60094549 Msa1258820:intron 25.0%
!! AGAGAAAGTTTTACTTTAGA+AGG - chr8_2:60094814-60094833 Msa1258820:CDS 25.0%
!!! GAGAAAGTTTTACTTTAGAA+GGG - chr8_2:60094815-60094834 Msa1258820:CDS 25.0%
! GGAAATGAAAAAAACATGTT+AGG + chr8_2:60095197-60095216 None:intergenic 25.0%
! GATCATTTATGTTCAATCTT+AGG - chr8_2:60095238-60095257 Msa1258820:intron 25.0%
! TTATCAATATTATCCTTGCT+AGG + chr8_2:60095555-60095574 None:intergenic 25.0%
! AGCAAGGATAATATTGATAA+TGG - chr8_2:60095555-60095574 Msa1258820:intron 25.0%
!!! AGAAAGTTAAGTTCTGAAAT+TGG + chr8_2:60095725-60095744 None:intergenic 25.0%
! ATTTCAGAACTTAACTTTCT+CGG - chr8_2:60095725-60095744 Msa1258820:CDS 25.0%
! TAAGATCGCATAATAGAAAA+TGG + chr8_2:60096216-60096235 None:intergenic 25.0%
! AATATGTAACTCATGGAAAA+GGG + chr8_2:60096244-60096263 None:intergenic 25.0%
! AATAAACTCTAGTAACTACT+AGG + chr8_2:60096664-60096683 None:intergenic 25.0%
! GTTATGGAATTTGCAAATTT+GGG - chr8_2:60096836-60096855 Msa1258820:CDS 25.0%
! AAAAAAAAACTAGAGGTTCT+GGG + chr8_2:60097052-60097071 None:intergenic 25.0%
! GTTTAGGAAAAAAAAACTAG+AGG + chr8_2:60097059-60097078 None:intergenic 25.0%
!!! GATTGATTATCTGTTATTTC+TGG - chr8_2:60097207-60097226 Msa1258820:CDS 25.0%
! TTTAAACTTCAAAACTCCAT+TGG + chr8_2:60097297-60097316 None:intergenic 25.0%
!!! AGTTTTGAAGTTTAAAAGTC+AGG - chr8_2:60097301-60097320 Msa1258820:CDS 25.0%
!!! GTTTTGAAGTTTAAAAGTCA+GGG - chr8_2:60097302-60097321 Msa1258820:CDS 25.0%
ATTTGAAGGTTGAAGATGAA+GGG - chr8_2:60093534-60093553 Msa1258820:three_prime_UTR 30.0%
AAAGTTTCGAACTTTAACGA+TGG - chr8_2:60093575-60093594 Msa1258820:three_prime_UTR 30.0%
! AAAGTTTGGAACTTTAACGA+TGG - chr8_2:60093638-60093657 Msa1258820:three_prime_UTR 30.0%
! TCTTCATTTTCACCCTTAAT+AGG + chr8_2:60093806-60093825 None:intergenic 30.0%
!! AATTTGTTAAGGGTGAAGAA+AGG - chr8_2:60093825-60093844 Msa1258820:CDS 30.0%
! ATTTGTTAAGGGTGAAGAAA+GGG - chr8_2:60093826-60093845 Msa1258820:CDS 30.0%
!!! TTTTGGTTTTTCCTCCTAAT+GGG + chr8_2:60094160-60094179 None:intergenic 30.0%
!! GTATTTTTGATTGGAAGAAC+TGG - chr8_2:60094373-60094392 Msa1258820:CDS 30.0%
AATAACTGTTGCATCTTTGT+TGG - chr8_2:60094397-60094416 Msa1258820:intron 30.0%
TGATATTGTTAGTGTCATGT+CGG - chr8_2:60094575-60094594 Msa1258820:intron 30.0%
!!! TGCCTTTAAAATGTCTGTTT+TGG - chr8_2:60094676-60094695 Msa1258820:CDS 30.0%
AGAACTAACTAATCAAGCAA+TGG + chr8_2:60094719-60094738 None:intergenic 30.0%
! ACTAGGAGTATAACTAAAGT+CGG + chr8_2:60094743-60094762 None:intergenic 30.0%
ATATAGTAGAAGATCTCACT+AGG + chr8_2:60094760-60094779 None:intergenic 30.0%
TAGTGAGATCTTCTACTATA+TGG - chr8_2:60094759-60094778 Msa1258820:CDS 30.0%
ACATAGCAAACATGTTCTAT+TGG - chr8_2:60094865-60094884 Msa1258820:intron 30.0%
!!! TTCTATTGGCTTTTATGACT+GGG - chr8_2:60094879-60094898 Msa1258820:intron 30.0%
! ACTTTTACTTGTAGTACCAA+GGG - chr8_2:60095290-60095309 Msa1258820:intron 30.0%
CAGCCAGTAATTATTAATCA+AGG + chr8_2:60095367-60095386 None:intergenic 30.0%
! TTAATAATTACTGGCTGCTT+AGG - chr8_2:60095370-60095389 Msa1258820:intron 30.0%
! GGATTAATAGATGTCACTTA+TGG - chr8_2:60095391-60095410 Msa1258820:intron 30.0%
!!! TGGTTGTTTGGTTTTTACAA+TGG - chr8_2:60095485-60095504 Msa1258820:intron 30.0%
TTTATTATGCTTTCCTAGCA+AGG - chr8_2:60095539-60095558 Msa1258820:intron 30.0%
AAAAAATAATCCTTGCCAGA+TGG + chr8_2:60096160-60096179 None:intergenic 30.0%
ATATGTAACTCATGGAAAAG+GGG + chr8_2:60096243-60096262 None:intergenic 30.0%
GAATATGTAACTCATGGAAA+AGG + chr8_2:60096245-60096264 None:intergenic 30.0%
TTGGTAGAATATGTAACTCA+TGG + chr8_2:60096251-60096270 None:intergenic 30.0%
ACAGACAAGTCAAATTGATT+AGG + chr8_2:60096296-60096315 None:intergenic 30.0%
!! TAATCAATTTGACTTGTCTG+TGG - chr8_2:60096295-60096314 Msa1258820:intron 30.0%
TTCATGACATAAGTAGAAGA+TGG + chr8_2:60096363-60096382 None:intergenic 30.0%
TTAATGAAGAAACTGCATTC+AGG + chr8_2:60096468-60096487 None:intergenic 30.0%
TGCAGTTTCTTCATTAAAAC+TGG - chr8_2:60096471-60096490 Msa1258820:intron 30.0%
GCAGTTTCTTCATTAAAACT+GGG - chr8_2:60096472-60096491 Msa1258820:intron 30.0%
CAGTTTCTTCATTAAAACTG+GGG - chr8_2:60096473-60096492 Msa1258820:intron 30.0%
AATTTCACCATCCAAAGAAT+CGG - chr8_2:60096520-60096539 Msa1258820:intron 30.0%
! TTAGTATGATTAGTCGTATG+AGG - chr8_2:60096702-60096721 Msa1258820:CDS 30.0%
CGTTATGGAATTTGCAAATT+TGG - chr8_2:60096835-60096854 Msa1258820:CDS 30.0%
! TCAAGGATCTTCTATCTTTT+TGG - chr8_2:60097015-60097034 Msa1258820:CDS 30.0%
GAAAAAAAAACTAGAGGTTC+TGG + chr8_2:60097053-60097072 None:intergenic 30.0%
TCCTTTGGATTAAAGTTAAC+CGG - chr8_2:60097231-60097250 Msa1258820:CDS 30.0%
!! AGAAAGTGCTTAAATTTGTG+TGG - chr8_2:60097490-60097509 Msa1258820:five_prime_UTR 30.0%
TTATATGGGGAATCAGCAAA+GGG + chr8_2:60093211-60093230 None:intergenic 35.0%
TTTATATGGGGAATCAGCAA+AGG + chr8_2:60093212-60093231 None:intergenic 35.0%
TCATGAGAAGTTGGATTTGA+AGG - chr8_2:60093520-60093539 Msa1258820:three_prime_UTR 35.0%
GATTTGAAGGTTGAAGATGA+AGG - chr8_2:60093533-60093552 Msa1258820:three_prime_UTR 35.0%
TTTGAAGGTTGAAGATGAAG+GGG - chr8_2:60093535-60093554 Msa1258820:three_prime_UTR 35.0%
TGGAGTAGTTTCTGATGAAA+GGG - chr8_2:60093598-60093617 Msa1258820:three_prime_UTR 35.0%
AGATGAAGAAGAATCTGTTG+TGG - chr8_2:60093766-60093785 Msa1258820:CDS 35.0%
GATGAAGAAGAATCTGTTGT+GGG - chr8_2:60093767-60093786 Msa1258820:CDS 35.0%
AAGGTTGGGATACTAATAGT+TGG - chr8_2:60093870-60093889 Msa1258820:CDS 35.0%
AATGAACAATCTTCAGCTTC+AGG + chr8_2:60094085-60094104 None:intergenic 35.0%
GCAAATTTAATCACCCCATT+AGG - chr8_2:60094143-60094162 Msa1258820:intron 35.0%
AATTTAATCACCCCATTAGG+AGG - chr8_2:60094146-60094165 Msa1258820:CDS 35.0%
!!! TTTGGTTTTTCCTCCTAATG+GGG + chr8_2:60094159-60094178 None:intergenic 35.0%
!!! GTTTTGGTTTTTCCTCCTAA+TGG + chr8_2:60094161-60094180 None:intergenic 35.0%
!! ACAAAGACAAAGGGTATTTG+GGG + chr8_2:60094325-60094344 None:intergenic 35.0%
!! CACAAAGACAAAGGGTATTT+GGG + chr8_2:60094326-60094345 None:intergenic 35.0%
ATATCCACCACAAAGACAAA+GGG + chr8_2:60094334-60094353 None:intergenic 35.0%
AATATCCACCACAAAGACAA+AGG + chr8_2:60094335-60094354 None:intergenic 35.0%
TATGTGCTTCAAAGATTGCA+AGG + chr8_2:60094468-60094487 None:intergenic 35.0%
!! CAATCTTTGAAGCACATACA+CGG - chr8_2:60094470-60094489 Msa1258820:intron 35.0%
! ACGACTTCTATTAGAAGTGT+CGG - chr8_2:60094629-60094648 Msa1258820:CDS 35.0%
! GGCCAAAACAGACATTTTAA+AGG + chr8_2:60094681-60094700 None:intergenic 35.0%
ATCTTCTACTATATGGCGTA+AGG - chr8_2:60094766-60094785 Msa1258820:CDS 35.0%
CTTCGCTAGGGTTATAAAAA+TGG - chr8_2:60094790-60094809 Msa1258820:CDS 35.0%
! TTTACTTTAGAAGGGACAGT+AGG - chr8_2:60094823-60094842 Msa1258820:CDS 35.0%
!!! GTTCTATTGGCTTTTATGAC+TGG - chr8_2:60094878-60094897 Msa1258820:intron 35.0%
TTACTATCACACTATCACTC+TGG - chr8_2:60095089-60095108 Msa1258820:intron 35.0%
ATAAATGATCTACGACCTCA+AGG + chr8_2:60095228-60095247 None:intergenic 35.0%
! CACTTTTACTTGTAGTACCA+AGG - chr8_2:60095289-60095308 Msa1258820:intron 35.0%
! CTTTTACTTGTAGTACCAAG+GGG - chr8_2:60095291-60095310 Msa1258820:intron 35.0%
TGGTATGGCAGTATTATCAA+AGG - chr8_2:60095639-60095658 Msa1258820:intron 35.0%
ATAAGTTGTACCAGACGAAT+AGG + chr8_2:60095755-60095774 None:intergenic 35.0%
TCCATTCCAATCAGAAGTTT+GGG + chr8_2:60096104-60096123 None:intergenic 35.0%
ATCCATTCCAATCAGAAGTT+TGG + chr8_2:60096105-60096124 None:intergenic 35.0%
TTCTGATTGGAATGGATATC+AGG - chr8_2:60096108-60096127 Msa1258820:intron 35.0%
ATTCAATACCAAAAGCCATC+TGG - chr8_2:60096142-60096161 Msa1258820:intron 35.0%
ACAACTTGTAAGAGTTCAGT+TGG + chr8_2:60096270-60096289 None:intergenic 35.0%
! CTTTCTGGAAACACTTCAAA+CGG + chr8_2:60096435-60096454 None:intergenic 35.0%
ATTTCACCATCCAAAGAATC+GGG - chr8_2:60096521-60096540 Msa1258820:intron 35.0%
AAAACAGCAGCATAACTTAC+AGG + chr8_2:60096597-60096616 None:intergenic 35.0%
TATGAGGCTACTAAGTAGAT+TGG - chr8_2:60096718-60096737 Msa1258820:CDS 35.0%
AGATAGAAGATCCTTGACAA+AGG + chr8_2:60097012-60097031 None:intergenic 35.0%
!! TCTGTTATTTCTGGTTCCTT+TGG - chr8_2:60097216-60097235 Msa1258820:CDS 35.0%
ACCGGTTAACTTTAATCCAA+AGG + chr8_2:60097235-60097254 None:intergenic 35.0%
TGGATTAAAGTTAACCGGTT+TGG - chr8_2:60097236-60097255 Msa1258820:CDS 35.0%
!! TTAAAGTTAACCGGTTTGGA+TGG - chr8_2:60097240-60097259 Msa1258820:CDS 35.0%
AAAATCATTGCACTATGCAC+CGG + chr8_2:60097364-60097383 None:intergenic 35.0%
AGTTAAATGCTTCTGCCATT+TGG - chr8_2:60097430-60097449 Msa1258820:five_prime_UTR 35.0%
! GTTAAATGCTTCTGCCATTT+GGG - chr8_2:60097431-60097450 Msa1258820:five_prime_UTR 35.0%
GCATATGAATATGACCCAAA+TGG + chr8_2:60097448-60097467 None:intergenic 35.0%
TCATATGCATATTCTTCAGC+AGG - chr8_2:60097460-60097479 Msa1258820:five_prime_UTR 35.0%
! TGCTACTAGGGTTTGAAATG+TGG - chr8_2:60093323-60093342 Msa1258820:three_prime_UTR 40.0%
! TACTAGGGTTTGAAATGTGG+AGG - chr8_2:60093326-60093345 Msa1258820:three_prime_UTR 40.0%
! ACTAGGGTTTGAAATGTGGA+GGG - chr8_2:60093327-60093346 Msa1258820:three_prime_UTR 40.0%
! TTTGAAATGTGGAGGGAGAA+TGG - chr8_2:60093334-60093353 Msa1258820:three_prime_UTR 40.0%
GGAAAGAGTAGCAGCTAAAT+CGG + chr8_2:60093375-60093394 None:intergenic 40.0%
TTTAACCTCAGAACCCAGTT+GGG + chr8_2:60093411-60093430 None:intergenic 40.0%
ACCGTCAGATCTCAATCAAA+CGG - chr8_2:60093463-60093482 Msa1258820:three_prime_UTR 40.0%
ACCGTTTGATTGAGATCTGA+CGG + chr8_2:60093467-60093486 None:intergenic 40.0%
!! GAATGATGATGAACTTGCTG+TGG - chr8_2:60093493-60093512 Msa1258820:three_prime_UTR 40.0%
GTTTCGAACTTTAACGATGG+TGG - chr8_2:60093578-60093597 Msa1258820:three_prime_UTR 40.0%
GTGGAGTAGTTTCTGATGAA+AGG - chr8_2:60093597-60093616 Msa1258820:three_prime_UTR 40.0%
GGAGTAGTTTCTGATGAAAG+GGG - chr8_2:60093599-60093618 Msa1258820:three_prime_UTR 40.0%
TTTAACGATGGTGAACGAGT+TGG - chr8_2:60093650-60093669 Msa1258820:three_prime_UTR 40.0%
! TGAACGAGTTGGAGATGAAA+GGG - chr8_2:60093661-60093680 Msa1258820:three_prime_UTR 40.0%
! TGGTGATGAAGAATCTCTGA+AGG - chr8_2:60093733-60093752 Msa1258820:exon 40.0%
GGTGATGAAGAATCTCTGAA+GGG - chr8_2:60093734-60093753 Msa1258820:exon 40.0%
! AGAATCTCTGAAGGGTGAAA+AGG - chr8_2:60093742-60093761 Msa1258820:CDS 40.0%
!! GAAGAAAGGGTTGATGTTGA+TGG - chr8_2:60093839-60093858 Msa1258820:CDS 40.0%
GAGAATGTGAATGAAGAGCT+TGG - chr8_2:60093896-60093915 Msa1258820:CDS 40.0%
AATGTGAATGAAGAGCTTGG+TGG - chr8_2:60093899-60093918 Msa1258820:CDS 40.0%
TGGTAGAGATGCTGATGATT+GGG - chr8_2:60093922-60093941 Msa1258820:intron 40.0%
! TATGGTTATGGTGCTGGATA+TGG - chr8_2:60093977-60093996 Msa1258820:intron 40.0%
! ATGGTTATGGTGCTGGATAT+GGG - chr8_2:60093978-60093997 Msa1258820:intron 40.0%
! TTATGGCTATGGTGATGAGA+AGG - chr8_2:60094018-60094037 Msa1258820:intron 40.0%
GAACTCATCAATTCCCTTTG+AGG - chr8_2:60094059-60094078 Msa1258820:intron 40.0%
TAGGAGGAAAAACCAAAACC+AGG - chr8_2:60094162-60094181 Msa1258820:CDS 40.0%
!! CCACAAAGACAAAGGGTATT+TGG + chr8_2:60094327-60094346 None:intergenic 40.0%
CCAAATACCCTTTGTCTTTG+TGG - chr8_2:60094324-60094343 Msa1258820:CDS 40.0%
AATACCCTTTGTCTTTGTGG+TGG - chr8_2:60094327-60094346 Msa1258820:CDS 40.0%
GTGTCAGACACTAACATTGT+CGG - chr8_2:60094597-60094616 Msa1258820:intron 40.0%
CAATGGCACAGACAAAAAAG+AGG + chr8_2:60094702-60094721 None:intergenic 40.0%
!!! GGTGTTTTGACTACAAATGC+AGG - chr8_2:60094950-60094969 Msa1258820:intron 40.0%
ACTACAAATGCAGGCTGTTA+GGG - chr8_2:60094959-60094978 Msa1258820:intron 40.0%
CAATAACCTTGCATTCTGTC+TGG + chr8_2:60095025-60095044 None:intergenic 40.0%
ATAAACCTTGCACACAGTCA+CGG + chr8_2:60095160-60095179 None:intergenic 40.0%
! GTAAAAGTGCAGAACAACGT+CGG + chr8_2:60095278-60095297 None:intergenic 40.0%
TATGTCCTACTCTTTAACCC+AGG + chr8_2:60095318-60095337 None:intergenic 40.0%
TTATGGACACTCTGATTCTC+AGG - chr8_2:60095408-60095427 Msa1258820:intron 40.0%
AGGAAGCAAACATGGTTGTT+TGG - chr8_2:60095473-60095492 Msa1258820:intron 40.0%
TGGCAGTATTATCAAAGGTC+TGG - chr8_2:60095644-60095663 Msa1258820:intron 40.0%
CAGTATTATCAAAGGTCTGG+AGG - chr8_2:60095647-60095666 Msa1258820:intron 40.0%
TGTAAGTACAACCACTCAAG+AGG - chr8_2:60095689-60095708 Msa1258820:intron 40.0%
GTAAGTACAACCACTCAAGA+GGG - chr8_2:60095690-60095709 Msa1258820:intron 40.0%
GTAAGTTTGGATCGAACTGT+AGG - chr8_2:60095900-60095919 Msa1258820:intron 40.0%
GATCAATCAGGGTATGGTAA+TGG - chr8_2:60095959-60095978 Msa1258820:intron 40.0%
!! AATCAGGGTATGGTAATGGA+GGG - chr8_2:60095963-60095982 Msa1258820:intron 40.0%
TGATACACCTCGTAGTGAAA+CGG + chr8_2:60095990-60096009 None:intergenic 40.0%
CTTTCTTGAAGAAGACCATG+AGG + chr8_2:60096026-60096045 None:intergenic 40.0%
CCATTCCAATCAGAAGTTTG+GGG + chr8_2:60096103-60096122 None:intergenic 40.0%
! GACTTGTCTGTGGTTTGTAA+AGG - chr8_2:60096305-60096324 Msa1258820:intron 40.0%
CATGATCCTCTCTGATAAGT+AGG + chr8_2:60096337-60096356 None:intergenic 40.0%
! CGTTTGAAGTGTTTCCAGAA+AGG - chr8_2:60096433-60096452 Msa1258820:intron 40.0%
AACTTTGCAACCCGATTCTT+TGG + chr8_2:60096534-60096553 None:intergenic 40.0%
GCATAACTTACAGGTCTCAA+AGG + chr8_2:60096588-60096607 None:intergenic 40.0%
!!! TGCTGCTGTTTTTGCTTCTA+TGG - chr8_2:60096605-60096624 Msa1258820:CDS 40.0%
TGCTCACACTATAGTCGTTA+TGG - chr8_2:60096820-60096839 Msa1258820:CDS 40.0%
AGCATTAGCTGAGTTTGCAT+AGG + chr8_2:60096929-60096948 None:intergenic 40.0%
CTGTCTAAAAGCCTTTGTCA+AGG - chr8_2:60096998-60097017 Msa1258820:CDS 40.0%
ACATTCACAACCATCCAAAC+CGG + chr8_2:60097253-60097272 None:intergenic 40.0%
TCTTGTTCAACAGTTGCCAA+TGG - chr8_2:60097278-60097297 Msa1258820:CDS 40.0%
AAAGGGAGTGAAGAAACCAG+GGG + chr8_2:60093194-60093213 None:intergenic 45.0%
CAAAGGGAGTGAAGAAACCA+GGG + chr8_2:60093195-60093214 None:intergenic 45.0%
AGAAAGATCACACACTCACG+CGG + chr8_2:60093271-60093290 None:intergenic 45.0%
TTAACCTCAGAACCCAGTTG+GGG + chr8_2:60093410-60093429 None:intergenic 45.0%
GTTTAACCTCAGAACCCAGT+TGG + chr8_2:60093412-60093431 None:intergenic 45.0%
GGTGGAGAATGATGATCAAC+TGG + chr8_2:60093446-60093465 None:intergenic 45.0%
GTTTGATTGAGATCTGACGG+TGG + chr8_2:60093464-60093483 None:intergenic 45.0%
TGTGGAGCTTCATGAGAAGT+TGG - chr8_2:60093511-60093530 Msa1258820:three_prime_UTR 45.0%
! GTGAACGAGTTGGAGATGAA+AGG - chr8_2:60093660-60093679 Msa1258820:three_prime_UTR 45.0%
! GAACGAGTTGGAGATGAAAG+GGG - chr8_2:60093662-60093681 Msa1258820:three_prime_UTR 45.0%
!! TTTGATGATGGCGAACGAGT+TGG - chr8_2:60093713-60093732 Msa1258820:three_prime_UTR 45.0%
! GATGTTGATGGAGACAGCAA+AGG - chr8_2:60093851-60093870 Msa1258820:CDS 45.0%
TTGATGGAGACAGCAAAGGT+TGG - chr8_2:60093855-60093874 Msa1258820:CDS 45.0%
TGATGGAGACAGCAAAGGTT+GGG - chr8_2:60093856-60093875 Msa1258820:CDS 45.0%
GTGGTAGAGATGCTGATGAT+TGG - chr8_2:60093921-60093940 Msa1258820:intron 45.0%
GGTAGAGATGCTGATGATTG+GGG - chr8_2:60093923-60093942 Msa1258820:intron 45.0%
GATGCTGATGATTGGGGTTA+TGG - chr8_2:60093929-60093948 Msa1258820:intron 45.0%
! TGGTTATGGTGCTGGATATG+GGG - chr8_2:60093979-60093998 Msa1258820:intron 45.0%
TATGGGGATGGTTATGGTGA+CGG - chr8_2:60093995-60094014 Msa1258820:intron 45.0%
!! GATGGTTATGGTGACGGTTA+TGG - chr8_2:60094001-60094020 Msa1258820:intron 45.0%
!! TATGGTGACGGTTATGGCTA+TGG - chr8_2:60094007-60094026 Msa1258820:intron 45.0%
AAGGAAGAGAAAAGCAGCGA+TGG - chr8_2:60094037-60094056 Msa1258820:intron 45.0%
AAGACTGGGAGTTGCAAGTT+TGG - chr8_2:60094112-60094131 Msa1258820:intron 45.0%
!! CAAAGGGTATTTGGGGCAAA+AGG + chr8_2:60094318-60094337 None:intergenic 45.0%
GACTACAAATGCAGGCTGTT+AGG - chr8_2:60094958-60094977 Msa1258820:intron 45.0%
TAAACCTTGCACACAGTCAC+GGG + chr8_2:60095159-60095178 None:intergenic 45.0%
CATTTCCTTGTGTCACCTTG+AGG - chr8_2:60095210-60095229 Msa1258820:intron 45.0%
TGTACATTAGCCACGAACAG+AGG - chr8_2:60095453-60095472 Msa1258820:intron 45.0%
ATGTTTGCTTCCTCTGTTCG+TGG + chr8_2:60095466-60095485 None:intergenic 45.0%
ACGAACAGAGGAAGCAAACA+TGG - chr8_2:60095465-60095484 Msa1258820:intron 45.0%
AGGTCTGGAGGTTGTAAGTT+TGG - chr8_2:60095659-60095678 Msa1258820:intron 45.0%
CATCCTGATCCTACAACTGT+CGG - chr8_2:60095929-60095948 Msa1258820:intron 45.0%
TCGGAGGATCTGATCAATCA+GGG - chr8_2:60095948-60095967 Msa1258820:intron 45.0%
GGATCTGATCAATCAGGGTA+TGG - chr8_2:60095953-60095972 Msa1258820:intron 45.0%
!! CAATCAGGGTATGGTAATGG+AGG - chr8_2:60095962-60095981 Msa1258820:intron 45.0%
GTAGGCATCAATGGAGCAAA+AGG + chr8_2:60096061-60096080 None:intergenic 45.0%
TTGCTCCCCAAACTTCTGAT+TGG - chr8_2:60096095-60096114 Msa1258820:intron 45.0%
CCCCAAACTTCTGATTGGAA+TGG - chr8_2:60096100-60096119 Msa1258820:intron 45.0%
ATACCAAAAGCCATCTGGCA+AGG - chr8_2:60096147-60096166 Msa1258820:intron 45.0%
! AATCCTTGCCAGATGGCTTT+TGG + chr8_2:60096153-60096172 None:intergenic 45.0%
ATCCTCTCTGATAAGTAGGC+AGG + chr8_2:60096333-60096352 None:intergenic 45.0%
!! CAAACGGCATCTGCTTTTGA+TGG + chr8_2:60096419-60096438 None:intergenic 45.0%
! AAACTGCATTCAGGTTCACC+AGG + chr8_2:60096459-60096478 None:intergenic 45.0%
TTGCAACCCGATTCTTTGGA+TGG + chr8_2:60096530-60096549 None:intergenic 45.0%
TTGTCACTAAGGTTGCAAGG+AGG + chr8_2:60096558-60096577 None:intergenic 45.0%
TCCTTGCAACCTTAGTGACA+AGG - chr8_2:60096557-60096576 Msa1258820:intron 45.0%
CCTTGCAACCTTAGTGACAA+GGG - chr8_2:60096558-60096577 Msa1258820:CDS 45.0%
AACTTACAGGTCTCAAAGGC+AGG + chr8_2:60096584-60096603 None:intergenic 45.0%
TATAGTGTGAGCAGACACTC+TGG + chr8_2:60096813-60096832 None:intergenic 45.0%
TGCAAACTCAGCTAATGCTC+AGG - chr8_2:60096930-60096949 Msa1258820:CDS 45.0%
AAACTCAGCTAATGCTCAGG+TGG - chr8_2:60096933-60096952 Msa1258820:CDS 45.0%
!! GTGGTAGTACTGGTTAGACA+CGG + chr8_2:60097335-60097354 None:intergenic 45.0%
!! GGCAGAAGCATTTAACTGCA+GGG + chr8_2:60097427-60097446 None:intergenic 45.0%
!! TGGCAGAAGCATTTAACTGC+AGG + chr8_2:60097428-60097447 None:intergenic 45.0%
GCAAAGGGAGTGAAGAAACC+AGG + chr8_2:60093196-60093215 None:intergenic 50.0%
AGAACCCAGTTGGGGTTCTT+CGG + chr8_2:60093402-60093421 None:intergenic 50.0%
! GTGAATGAAGAGCTTGGTGG+TGG - chr8_2:60093902-60093921 Msa1258820:CDS 50.0%
GCTGATGATTGGGGTTATGG+TGG - chr8_2:60093932-60093951 Msa1258820:intron 50.0%
GATGATTGGGGTTATGGTGG+TGG - chr8_2:60093935-60093954 Msa1258820:intron 50.0%
!! GGTGGTGCTGGTTATGGTTA+TGG - chr8_2:60093965-60093984 Msa1258820:intron 50.0%
GCTGGTTATGGTTATGGTGC+TGG - chr8_2:60093971-60093990 Msa1258820:intron 50.0%
! TATGGTGCTGGATATGGGGA+TGG - chr8_2:60093983-60094002 Msa1258820:intron 50.0%
GCTGGATATGGGGATGGTTA+TGG - chr8_2:60093989-60094008 Msa1258820:intron 50.0%
CTTCAGCTTCAGGCCTCAAA+GGG + chr8_2:60094075-60094094 None:intergenic 50.0%
TCTTCAGCTTCAGGCCTCAA+AGG + chr8_2:60094076-60094095 None:intergenic 50.0%
GGCATTGCGATTTGCAAGCT+TGG + chr8_2:60094660-60094679 None:intergenic 50.0%
TATGGCGTAAGGACTTCGCT+AGG - chr8_2:60094777-60094796 Msa1258820:CDS 50.0%
ATGGCGTAAGGACTTCGCTA+GGG - chr8_2:60094778-60094797 Msa1258820:CDS 50.0%
AATGCAGGCTGTTAGGGAGA+AGG - chr8_2:60094965-60094984 Msa1258820:intron 50.0%
GAAGAACCAGAAGAGAACGC+AGG - chr8_2:60094999-60095018 Msa1258820:CDS 50.0%
AAACCTTGCACACAGTCACG+GGG + chr8_2:60095158-60095177 None:intergenic 50.0%
TACGACCTCAAGGTGACACA+AGG + chr8_2:60095218-60095237 None:intergenic 50.0%
TTGTAGTACCAAGGGGACCT+GGG - chr8_2:60095298-60095317 Msa1258820:intron 50.0%
TCTCGGCTTACCTATTCGTC+TGG - chr8_2:60095742-60095761 Msa1258820:CDS 50.0%
AGCCAGTGCGCATGTAATAG+GGG + chr8_2:60095877-60095896 None:intergenic 50.0%
GAGCCAGTGCGCATGTAATA+GGG + chr8_2:60095878-60095897 None:intergenic 50.0%
AGAGCCAGTGCGCATGTAAT+AGG + chr8_2:60095879-60095898 None:intergenic 50.0%
!! CGCACTGGCTCTTGTAAGTT+TGG - chr8_2:60095887-60095906 Msa1258820:intron 50.0%
TCAGATCCTCCGACAGTTGT+AGG + chr8_2:60095941-60095960 None:intergenic 50.0%
GTCGGAGGATCTGATCAATC+AGG - chr8_2:60095947-60095966 Msa1258820:intron 50.0%
TGAGTAGGCGTAGGCATCAA+TGG + chr8_2:60096070-60096089 None:intergenic 50.0%
TTGATGCCTACGCCTACTCA+AGG - chr8_2:60096070-60096089 Msa1258820:intron 50.0%
CACCTGCCTACTTATCAGAG+AGG - chr8_2:60096328-60096347 Msa1258820:intron 50.0%
! GAAGTGTTTCCAGAAAGGCC+TGG - chr8_2:60096438-60096457 Msa1258820:intron 50.0%
CCCTTGTCACTAAGGTTGCA+AGG + chr8_2:60096561-60096580 None:intergenic 50.0%
GGGTGGTCAAATCTACAAGC+TGG + chr8_2:60096862-60096881 None:intergenic 50.0%
! TTAGGGGAAGTGCGCTTTCT+GGG + chr8_2:60096882-60096901 None:intergenic 50.0%
! ATTAGGGGAAGTGCGCTTTC+TGG + chr8_2:60096883-60096902 None:intergenic 50.0%
TCCGAGTCCAGGCATCATTA+GGG + chr8_2:60096899-60096918 None:intergenic 50.0%
TAGGATTGTTGTCCGAGTCC+AGG + chr8_2:60096910-60096929 None:intergenic 50.0%
CCAGTACTACCACCAATAGC+CGG - chr8_2:60097342-60097361 Msa1258820:CDS 50.0%
!! TTGCACTATGCACCGGCTAT+TGG + chr8_2:60097357-60097376 None:intergenic 50.0%
TGCAGGGAAACGAGTGAATG+GGG + chr8_2:60097411-60097430 None:intergenic 50.0%
CTGCAGGGAAACGAGTGAAT+GGG + chr8_2:60097412-60097431 None:intergenic 50.0%
ACTGCAGGGAAACGAGTGAA+TGG + chr8_2:60097413-60097432 None:intergenic 50.0%
CATTTCACACACACTGCCCC+TGG - chr8_2:60093175-60093194 Msa1258820:three_prime_UTR 55.0%
AACGCCGAAGAACCCCAACT+GGG - chr8_2:60093395-60093414 Msa1258820:three_prime_UTR 55.0%
AGAACCCCAACTGGGTTCTG+AGG - chr8_2:60093403-60093422 Msa1258820:three_prime_UTR 55.0%
!! TGGGGTTATGGTGGTGGTGA+TGG - chr8_2:60093941-60093960 Msa1258820:intron 55.0%
!! GGTTATGGTGGTGGTGATGG+TGG - chr8_2:60093944-60093963 Msa1258820:intron 55.0%
!! TATGGTGGTGGTGATGGTGG+TGG - chr8_2:60093947-60093966 Msa1258820:intron 55.0%
!! GATGGTGGTGGTGCTGGTTA+TGG - chr8_2:60093959-60093978 Msa1258820:intron 55.0%
CTTGTAGTACCAAGGGGACC+TGG - chr8_2:60095297-60095316 Msa1258820:intron 55.0%
CTCTTTAACCCAGGTCCCCT+TGG + chr8_2:60095309-60095328 None:intergenic 55.0%
GGGGACCTGGGTTAAAGAGT+AGG - chr8_2:60095310-60095329 Msa1258820:intron 55.0%
GTGCTGTGAACCCTCTTGAG+TGG + chr8_2:60095703-60095722 None:intergenic 55.0%
TGCCCCTATTACATGCGCAC+TGG - chr8_2:60095872-60095891 Msa1258820:intron 55.0%
CCTCCGACAGTTGTAGGATC+AGG + chr8_2:60095935-60095954 None:intergenic 55.0%
CCTGATCCTACAACTGTCGG+AGG - chr8_2:60095932-60095951 Msa1258820:intron 55.0%
CACAACAACCTGTCGCCTCA+TGG - chr8_2:60096008-60096027 Msa1258820:intron 55.0%
GAAGAAGACCATGAGGCGAC+AGG + chr8_2:60096019-60096038 None:intergenic 55.0%
GCAAGTCCTTGAGTAGGCGT+AGG + chr8_2:60096079-60096098 None:intergenic 55.0%
TGGGGAGCAAGTCCTTGAGT+AGG + chr8_2:60096085-60096104 None:intergenic 55.0%
TCAGGTTCACCAGGCCTTTC+TGG + chr8_2:60096450-60096469 None:intergenic 55.0%
AAGGCAGGCCCTTGTCACTA+AGG + chr8_2:60096569-60096588 None:intergenic 55.0%
GCACTTCCCCTAATGATGCC+TGG - chr8_2:60096889-60096908 Msa1258820:CDS 55.0%
CCGAGTCCAGGCATCATTAG+GGG + chr8_2:60096898-60096917 None:intergenic 55.0%
CCCCTAATGATGCCTGGACT+CGG - chr8_2:60096895-60096914 Msa1258820:CDS 55.0%
GTCCGAGTCCAGGCATCATT+AGG + chr8_2:60096900-60096919 None:intergenic 55.0%
TCAGCTAATGCTCAGGTGGC+TGG - chr8_2:60096937-60096956 Msa1258820:CDS 55.0%
CAGCTAATGCTCAGGTGGCT+GGG - chr8_2:60096938-60096957 Msa1258820:CDS 55.0%
TAATGCTCAGGTGGCTGGGA+TGG - chr8_2:60096942-60096961 Msa1258820:CDS 55.0%
AATGCTCAGGTGGCTGGGAT+GGG - chr8_2:60096943-60096962 Msa1258820:CDS 55.0%
! CCGGCTATTGGTGGTAGTAC+TGG + chr8_2:60097345-60097364 None:intergenic 55.0%
!! CACTATGCACCGGCTATTGG+TGG + chr8_2:60097354-60097373 None:intergenic 55.0%
CAGTTGGGGTTCTTCGGCGT+TGG + chr8_2:60093396-60093415 None:intergenic 60.0%
CAACGCCGAAGAACCCCAAC+TGG - chr8_2:60093394-60093413 Msa1258820:three_prime_UTR 60.0%
GTCTGGCCTGCGTTCTCTTC+TGG + chr8_2:60095008-60095027 None:intergenic 60.0%
CGCAGGCCAGACAGAATGCA+AGG - chr8_2:60095016-60095035 Msa1258820:CDS 60.0%
GTTCCCCGTGACTGTGTGCA+AGG - chr8_2:60095152-60095171 Msa1258820:intron 60.0%
GGAGGGTCCGTTTCACTACG+AGG - chr8_2:60095980-60095999 Msa1258820:intron 60.0%
GTGAGCAGACACTCTGGTCC+TGG + chr8_2:60096807-60096826 None:intergenic 60.0%
!! GGTGGTGATGGTGGTGGTGC+TGG - chr8_2:60093953-60093972 Msa1258820:intron 65.0%
! GGGGAAGTGCGCTTTCTGGG+TGG + chr8_2:60096879-60096898 None:intergenic 65.0%
GCTCAGGTGGCTGGGATGGG+TGG - chr8_2:60096946-60096965 Msa1258820:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 60093166 60097575 60093166 ID=Msa1258820;Name=Msa1258820
chr8_2 mRNA 60093166 60097575 60093166 ID=Msa1258820-mRNA-1;Parent=Msa1258820;Name=Msa1258820-mRNA-1;_AED=0.06;_eAED=0.06;_QI=187|1|1|1|1|1|6|570|582
chr8_2 exon 60093166 60093933 60093166 ID=Msa1258820-mRNA-1:exon:18875;Parent=Msa1258820-mRNA-1
chr8_2 exon 60094145 60094414 60094145 ID=Msa1258820-mRNA-1:exon:18874;Parent=Msa1258820-mRNA-1
chr8_2 exon 60094612 60094881 60094612 ID=Msa1258820-mRNA-1:exon:18873;Parent=Msa1258820-mRNA-1
chr8_2 exon 60094978 60095091 60094978 ID=Msa1258820-mRNA-1:exon:18872;Parent=Msa1258820-mRNA-1
chr8_2 exon 60095704 60095769 60095704 ID=Msa1258820-mRNA-1:exon:18871;Parent=Msa1258820-mRNA-1
chr8_2 exon 60096558 60097575 60096558 ID=Msa1258820-mRNA-1:exon:18870;Parent=Msa1258820-mRNA-1
chr8_2 five_prime_UTR 60097389 60097575 60097389 ID=Msa1258820-mRNA-1:five_prime_utr;Parent=Msa1258820-mRNA-1
chr8_2 CDS 60096558 60097388 60096558 ID=Msa1258820-mRNA-1:cds;Parent=Msa1258820-mRNA-1
chr8_2 CDS 60095704 60095769 60095704 ID=Msa1258820-mRNA-1:cds;Parent=Msa1258820-mRNA-1
chr8_2 CDS 60094978 60095091 60094978 ID=Msa1258820-mRNA-1:cds;Parent=Msa1258820-mRNA-1
chr8_2 CDS 60094612 60094881 60094612 ID=Msa1258820-mRNA-1:cds;Parent=Msa1258820-mRNA-1
chr8_2 CDS 60094145 60094414 60094145 ID=Msa1258820-mRNA-1:cds;Parent=Msa1258820-mRNA-1
chr8_2 CDS 60093736 60093933 60093736 ID=Msa1258820-mRNA-1:cds;Parent=Msa1258820-mRNA-1
chr8_2 three_prime_UTR 60093166 60093735 60093166 ID=Msa1258820-mRNA-1:three_prime_utr;Parent=Msa1258820-mRNA-1
Gene Sequence

>Msa1258820

ATGGAACACTCTGAAGAAACCGATTTAGCTGCTACTCTTTCCAACGCCGAAGAACCCCAACTGGGTTCTGAGGTTAAACAATCTTCTTCACCAGTTGATCATCATTCTCCACCGTCAGATCTCAATCAAACGGTTCAAAAGAATGATGATGAACTTGCTGTGGAGCTTCATGAGAAGTTGGATTTGAAGGTTGAAGATGAAGGGGTTGTTGAAACTGATGATAAAGTTTCGAACTTTAACGATGGTGGAGTAGTTTCTGATGAAAGGGGTGCTGAAATTGATGATAAAGTTTGGAACTTTAACGATGGTGAACGAGTTGGAGATGAAAGGGGTGCTGAAACTGATGATAAAGTTTTGAACTTTGATGATGGCGAACGAGTTGGTGATGAAGAATCTCTGAAGGGTGAAAAGGAAGATGAAGAAGAATCTGTTGTGGGTGAAAATGAAGAACCTATTAAGGGTGAAAATGAAGAATTTGTTAAGGGTGAAGAAAGGGTTGATGTTGATGGAGACAGCAAAGGTTGGGATACTAATAGTTGGAATGAGAATGTGAATGAAGAGCTTGGTGGTGGTAGAGATGCTGATGATTGGGGTTATGGTGGTGGTGATGGTGGTGGTGCTGGTTATGGTTATGGTGCTGGATATGGGGATGGTTATGGTGACGGTTATGGCTATGGTGATGAGAAGGAAGAGAAAAGCAGCGATGGAACTCATCAATTCCCTTTGAGGCCTGAAGCTGAAGATTGTTCATTTTATATGAAGACTGGGAGTTGCAAGTTTGGATTCAACTGCAAATTTAATCACCCCATTAGGAGGAAAAACCAAAACCAGGCTGTTAGGGAGAAGGTGCGAGAAAGAGAAGAACCAGAAGAGAACGCAGGCCAGACAGAATGCAAGTATTATCAAAGGTCTGGAGGTTGTAAGTTTGGAAAAGCTTGTAAGTACAACCACTCAAGAGGGTTCACAGCACCAATTTCAGAACTTAACTTTCTCGGCTTACCTATTCGTCTGGGAGAGAGAGAGTGCCCCTATTACATGCGCACTGGCTCTTGTAAGTTTGGATCGAACTGTAGGTTTAATCATCCTGATCCTACAACTGTCGGAGGATCTGATCAATCAGGGTATGGTAATGGAGGGTCCGTTTCACTACGAGGTGTATCACAACAACCTGTCGCCTCATGGTCTTCTTCAAGAAAGTTAAATGAAACACCTTTTGCTCCATTGATGCCTACGCCTACTCAAGGACTTGCTCCCCAAACTTCTGATTGGAATGGATATCAGGCACCTGCCTACTTATCAGAGAGGATCATGCATCCATCTTCTACTTATGTCATGAACAACCCAACTATTGAAACAAATGTTTACATGCACCATCAAAAGCAGATGCCGTTTGAAGTGTTTCCAGAAAGGCCTGGTGAACCTGAATGCAGTTTCTTCATTAAAACTGGGGATTGCAAGTTCAAATCTAATTGTAAATTTCACCATCCAAAGAATCGGGTTGCAAAGTTGCCTCCTTGCAACCTTAGTGACAAGGGCCTGCCTTTGAGACCTGACCAGAGTGTCTGCTCACACTATAGTCGTTATGGAATTTGCAAATTTGGGCCAGCTTGTAGATTTGACCACCCAGAAAGCGCACTTCCCCTAATGATGCCTGGACTCGGACAACAATCCTATGCAAACTCAGCTAATGCTCAGGTGGCTGGGATGGGTGGAAGTGCAAGTGATGCAACAATTCAACAATCTGTCTAA
Protein sequence

>Msa1258820

MEHSEETDLAATLSNAEEPQLGSEVKQSSSPVDHHSPPSDLNQTVQKNDDELAVELHEKLDLKVEDEGVVETDDKVSNFNDGGVVSDERGAEIDDKVWNFNDGERVGDERGAETDDKVLNFDDGERVGDEESLKGEKEDEEESVVGENEEPIKGENEEFVKGEERVDVDGDSKGWDTNSWNENVNEELGGGRDADDWGYGGGDGGGAGYGYGAGYGDGYGDGYGYGDEKEEKSSDGTHQFPLRPEAEDCSFYMKTGSCKFGFNCKFNHPIRRKNQNQAVREKVREREEPEENAGQTECKYYQRSGGCKFGKACKYNHSRGFTAPISELNFLGLPIRLGERECPYYMRTGSCKFGSNCRFNHPDPTTVGGSDQSGYGNGGSVSLRGVSQQPVASWSSSRKLNETPFAPLMPTPTQGLAPQTSDWNGYQAPAYLSERIMHPSSTYVMNNPTIETNVYMHHQKQMPFEVFPERPGEPECSFFIKTGDCKFKSNCKFHHPKNRVAKLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACRFDHPESALPLMMPGLGQQSYANSANAQVAGMGGSASDATIQQSV*