AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1330230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1330230 MtrunA17_Chr4g0058011 94.683 583 20 4 1 582 1 573 0.0 1041
Msa1330230 MtrunA17_Chr3g0116431 53.553 577 187 19 14 578 4 511 0.0 548
Msa1330230 MtrunA17_Chr7g0249221 37.097 372 190 10 240 581 27 384 4.57e-69 229
Msa1330230 MtrunA17_Chr5g0438891 37.888 322 167 12 240 546 36 339 1.15e-62 212
Msa1330230 MtrunA17_Chr2g0286151 34.006 347 181 10 240 546 44 382 8.18e-51 182
Msa1330230 MtrunA17_Chr1g0195891 33.022 321 169 12 233 520 39 346 1.93e-47 169
Msa1330230 MtrunA17_Chr1g0195891 41.880 117 65 1 467 580 91 207 6.91e-22 97.4
Msa1330230 MtrunA17_Chr8g0356241 30.641 359 151 9 224 542 174 474 3.51e-44 164
Msa1330230 MtrunA17_Chr8g0356241 34.946 186 75 5 240 379 309 494 1.00e-24 108
Msa1330230 MtrunA17_Chr8g0356241 48.780 82 37 1 462 543 185 261 1.40e-17 85.9
Msa1330230 MtrunA17_Chr4g0066941 32.335 334 180 11 240 542 43 361 1.15e-39 152
Msa1330230 MtrunA17_Chr4g0066941 56.579 76 31 1 467 542 332 405 3.27e-21 97.4
Msa1330230 MtrunA17_Chr4g0066941 40.777 103 53 1 467 569 88 182 7.15e-19 90.1
Msa1330230 MtrunA17_Chr4g0066941 45.833 72 39 0 291 362 334 405 9.44e-16 80.1
Msa1330230 MtrunA17_Chr4g0066941 39.506 81 48 1 465 545 41 120 1.00e-13 73.9
Msa1330230 MtrunA17_Chr4g0066941 37.363 91 46 2 233 320 325 407 6.50e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1330230 AT3G48440.1 58.308 331 125 8 221 541 90 417 3.00e-133 396
Msa1330230 AT3G48440.1 47.561 82 36 3 239 318 342 418 1.38e-14 76.6
Msa1330230 AT3G48440.1 29.268 164 62 5 466 581 106 263 2.85e-12 69.3
Msa1330230 AT5G63260.1 54.121 364 148 8 223 576 79 433 1.10e-124 374
Msa1330230 AT5G63260.2 52.116 378 150 8 223 576 79 449 3.78e-123 371
Msa1330230 AT3G02830.1 41.667 336 143 11 237 542 34 346 8.05e-72 236
Msa1330230 AT3G02830.1 44.118 102 56 1 467 567 82 183 1.66e-21 97.4
Msa1330230 AT3G02830.2 41.667 336 143 11 237 542 14 326 8.36e-72 235
Msa1330230 AT3G02830.2 44.118 102 56 1 467 567 62 163 1.35e-21 97.4
Msa1330230 AT5G16540.3 41.042 307 147 9 240 542 18 294 2.36e-66 220
Msa1330230 AT5G16540.3 39.474 114 56 1 467 567 63 176 3.89e-19 89.7
Msa1330230 AT5G16540.3 41.250 80 42 2 239 317 62 137 5.29e-12 68.2
Msa1330230 AT5G16540.1 41.042 307 147 9 240 542 39 315 2.51e-66 221
Msa1330230 AT5G16540.1 39.474 114 56 1 467 567 84 197 3.92e-19 90.1
Msa1330230 AT5G16540.1 41.250 80 42 2 239 317 83 158 4.89e-12 68.2
Msa1330230 AT3G06410.1 38.209 335 167 9 240 541 51 378 5.36e-65 220
Msa1330230 AT3G06410.1 49.367 79 38 1 466 542 96 174 2.49e-17 85.5
Msa1330230 AT3G06410.1 41.772 79 46 0 465 543 49 127 4.72e-15 78.2
Msa1330230 AT3G06410.1 33.333 93 58 2 226 317 289 378 1.81e-11 67.0
Msa1330230 AT2G47850.1 39.053 338 169 12 236 546 38 365 3.49e-63 215
Msa1330230 AT2G47850.3 39.053 338 169 12 236 546 38 365 3.49e-63 215
Msa1330230 AT5G18550.1 37.764 331 169 10 240 541 48 370 1.53e-62 213
Msa1330230 AT5G18550.1 40.179 112 50 2 467 561 94 205 7.03e-18 87.0
Msa1330230 AT5G18550.1 44.872 78 43 0 465 542 46 123 7.30e-17 84.0
Msa1330230 AT5G18550.4 37.764 331 169 10 240 541 48 370 2.52e-62 213
Msa1330230 AT5G18550.4 40.179 112 50 2 467 561 94 205 8.32e-18 86.7
Msa1330230 AT5G18550.4 44.304 79 44 0 465 543 46 124 8.92e-17 83.6
Msa1330230 AT5G18550.3 37.764 331 169 10 240 541 16 338 4.70e-62 211
Msa1330230 AT5G18550.3 40.179 112 50 2 467 561 62 173 1.37e-17 85.9
Msa1330230 AT5G18550.3 44.304 79 44 0 465 543 14 92 1.48e-16 82.8
Msa1330230 AT1G04990.1 36.420 324 169 11 240 553 44 340 7.10e-60 204
Msa1330230 AT1G04990.6 36.420 324 169 11 240 553 44 340 7.10e-60 204
Msa1330230 AT1G04990.2 36.420 324 169 11 240 553 44 340 7.10e-60 204
Msa1330230 AT5G16540.2 40.065 307 143 11 240 542 39 308 2.61e-59 202
Msa1330230 AT5G16540.2 39.474 114 56 1 467 567 84 197 2.98e-19 90.1
Msa1330230 AT5G16540.2 41.250 80 42 2 239 317 83 158 5.32e-12 68.2
Msa1330230 AT5G18550.2 35.542 332 162 11 240 541 48 357 3.91e-56 196
Msa1330230 AT5G18550.2 40.179 112 50 2 467 561 94 205 5.93e-18 87.0
Msa1330230 AT5G18550.2 44.872 78 43 0 465 542 46 123 6.84e-17 84.0
Msa1330230 AT2G32930.3 35.962 317 167 11 240 541 14 309 6.66e-54 189
Msa1330230 AT2G32930.2 35.435 333 179 11 240 557 41 352 6.81e-54 190
Msa1330230 AT5G16540.4 38.652 282 139 9 240 517 18 269 3.43e-51 177
Msa1330230 AT5G16540.4 39.474 114 56 1 467 567 63 176 1.62e-19 89.4
Msa1330230 AT5G16540.4 41.250 80 42 2 239 317 62 137 3.65e-12 67.4
Msa1330230 AT1G04990.5 34.259 324 156 12 240 553 44 320 4.25e-51 181
Msa1330230 AT2G32930.1 35.647 317 164 12 240 541 41 332 2.24e-50 180
Msa1330230 AT2G47850.2 35.562 329 167 12 236 546 38 339 6.23e-47 171
Msa1330230 AT1G04990.3 36.431 269 140 10 295 553 12 259 6.63e-45 162
Msa1330230 AT1G04990.3 41.333 75 42 1 290 362 178 252 3.01e-11 65.5
Msa1330230 AT3G12680.1 30.383 339 141 9 239 542 221 499 6.46e-42 159
Msa1330230 AT3G12680.1 33.333 174 76 3 240 373 337 510 6.86e-24 105
Msa1330230 AT3G12680.1 30.508 236 98 5 334 543 172 367 8.91e-23 102
Msa1330230 AT3G12680.1 28.879 232 104 6 219 389 242 473 3.90e-22 100
Msa1330230 AT2G47850.4 40.164 244 115 10 328 546 6 243 7.53e-40 149
Msa1330230 AT2G47850.4 41.463 82 46 1 283 362 158 239 2.04e-16 81.3
Msa1330230 AT2G47850.4 40.244 82 44 2 240 320 164 241 2.45e-12 68.9
Msa1330230 AT1G04990.4 33.829 269 127 11 295 553 12 239 3.04e-36 137
Msa1330230 AT1G48195.1 64.935 77 27 0 465 541 4 80 1.17e-32 120
Msa1330230 AT1G48195.1 43.836 73 39 1 291 361 8 80 7.54e-14 67.4

Find 218 sgRNAs with CRISPR-Local

Find 346 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTATGGAATTTGCAAATT+TGG 0.102331 8_4:+49388882 Msa1330230:CDS
TCAGGTTCACCAGGCCTTTC+TGG 0.111248 8_4:-49388494 None:intergenic
GATTGATTATCTGTTATTTC+TGG 0.157583 8_4:+49389254 Msa1330230:three_prime_UTR
TATGGTTATGGTGCTGGATA+TGG 0.203377 8_4:+49386024 Msa1330230:CDS
TGAAAATGAAGAACCTATTA+AGG 0.216671 8_4:+49385837 Msa1330230:CDS
TGCAGTTTCTTCATTAAAAC+TGG 0.219867 8_4:+49388518 Msa1330230:CDS
ATCTCTTATGTATTTATTAC+AGG 0.225819 8_4:+49389214 Msa1330230:three_prime_UTR
ATTAGGGGAAGTGCGCTTTC+TGG 0.242070 8_4:-49388927 None:intergenic
GTCTGGCCTGCGTTCTCTTC+TGG 0.244151 8_4:-49387052 None:intergenic
AGTTAAATGCTTCTGCCATT+TGG 0.251143 8_4:+49389477 Msa1330230:three_prime_UTR
GAAAATAAATAACCTGGTTT+TGG 0.252801 8_4:-49386221 None:intergenic
GATGGTGGTGGTGCTGGTTA+TGG 0.256446 8_4:+49386006 Msa1330230:CDS
ATCCATTCCAATCAGAAGTT+TGG 0.261285 8_4:-49388149 None:intergenic
AGAGCCAGTGCGCATGTAAT+AGG 0.276877 8_4:-49387923 None:intergenic
AACTTTGCAACCCGATTCTT+TGG 0.276880 8_4:-49388578 None:intergenic
AAATAAAATGTATCATGTTT+AGG 0.287634 8_4:-49389119 None:intergenic
CGCACTGGCTCTTGTAAGTT+TGG 0.291837 8_4:+49387934 Msa1330230:CDS
TAAACATTTGTTTCAATAGT+TGG 0.292535 8_4:-49388434 None:intergenic
TCTGTTATTTCTGGTTCCTT+TGG 0.294201 8_4:+49389263 Msa1330230:three_prime_UTR
AGAAAGTTAAGTTCTGAAAT+TGG 0.306141 8_4:-49387769 None:intergenic
GGTGGTGATGGTGGTGGTGC+TGG 0.307134 8_4:+49386000 Msa1330230:CDS
GAGCCAGTGCGCATGTAATA+GGG 0.307860 8_4:-49387922 None:intergenic
TCCATTCCAATCAGAAGTTT+GGG 0.314436 8_4:-49388148 None:intergenic
GTTAAATGCTTCTGCCATTT+GGG 0.327957 8_4:+49389478 Msa1330230:three_prime_UTR
GGTGGTGCTGGTTATGGTTA+TGG 0.330911 8_4:+49386012 Msa1330230:CDS
AAGACTGGGAGTTGCAAGTT+TGG 0.332151 8_4:+49386159 Msa1330230:CDS
GTTATGGAATTTGCAAATTT+GGG 0.333323 8_4:+49388883 Msa1330230:CDS
GCTGGATATGGGGATGGTTA+TGG 0.336846 8_4:+49386036 Msa1330230:CDS
GCAAATTTAATCACCCCATT+AGG 0.348706 8_4:+49386190 Msa1330230:CDS
TGGGGTTATGGTGGTGGTGA+TGG 0.352887 8_4:+49385988 Msa1330230:CDS
AAAATCAATTTCTGCTACTA+GGG 0.354485 8_4:+49385358 Msa1330230:five_prime_UTR
GACTACAAATGCAGGCTGTT+AGG 0.359180 8_4:+49387005 Msa1330230:intron
AGGTCTGGAGGTTGTAAGTT+TGG 0.359978 8_4:+49387706 Msa1330230:CDS
GGTTATGGTGGTGGTGATGG+TGG 0.363462 8_4:+49385991 Msa1330230:CDS
TTCTGATTGGAATGGATATC+AGG 0.365728 8_4:+49388155 Msa1330230:CDS
AATGAACAATCTTCAGCTTC+AGG 0.368842 8_4:-49386129 None:intergenic
ATTTCAGAACTTAACTTTCT+CGG 0.371138 8_4:+49387772 Msa1330230:CDS
TTAATGAAGAAACTGCATTC+AGG 0.373181 8_4:-49388512 None:intergenic
ATGGTTATGGTGCTGGATAT+GGG 0.374104 8_4:+49386025 Msa1330230:CDS
GTCCGAGTCCAGGCATCATT+AGG 0.374587 8_4:-49388944 None:intergenic
TCCTTTGGATTAAAGTTAAC+CGG 0.374927 8_4:+49389278 Msa1330230:three_prime_UTR
GATGGTTATGGTGACGGTTA+TGG 0.377832 8_4:+49386048 Msa1330230:CDS
TGGTAGAGATGCTGATGATT+GGG 0.379055 8_4:+49385969 Msa1330230:CDS
TGGATTAAAGTTAACCGGTT+TGG 0.379816 8_4:+49389283 Msa1330230:three_prime_UTR
TCCGAGTCCAGGCATCATTA+GGG 0.386170 8_4:-49388943 None:intergenic
GTGGTAGAGATGCTGATGAT+TGG 0.386802 8_4:+49385968 Msa1330230:CDS
TTAGGGGAAGTGCGCTTTCT+GGG 0.387787 8_4:-49388926 None:intergenic
TGCTCACACTATAGTCGTTA+TGG 0.390378 8_4:+49388867 Msa1330230:CDS
TTGCACTATGCACCGGCTAT+TGG 0.391636 8_4:-49389401 None:intergenic
GATGCTGATGATTGGGGTTA+TGG 0.395182 8_4:+49385976 Msa1330230:CDS
ACTACAAATGCAGGCTGTTA+GGG 0.405099 8_4:+49387006 Msa1330230:intron
AAACATTTGTTTCAATAGTT+GGG 0.406762 8_4:-49388433 None:intergenic
TTGCTCCCCAAACTTCTGAT+TGG 0.407376 8_4:+49388142 Msa1330230:CDS
TGAAAATGAAGAATTTGTTA+AGG 0.408488 8_4:+49385861 Msa1330230:CDS
TCAGATCCTCCGACAGTTGT+AGG 0.410518 8_4:-49387985 None:intergenic
AGAACCCAGTTGGGGTTCTT+CGG 0.410763 8_4:-49385446 None:intergenic
TCAGCTAATGCTCAGGTGGC+TGG 0.413776 8_4:+49388984 Msa1330230:CDS
TATGGTGGTGGTGATGGTGG+TGG 0.414901 8_4:+49385994 Msa1330230:CDS
AATGCTCAGGTGGCTGGGAT+GGG 0.415592 8_4:+49388990 Msa1330230:CDS
AATTTCACCATCCAAAGAAT+CGG 0.420180 8_4:+49388567 Msa1330230:CDS
CAACGCCGAAGAACCCCAAC+TGG 0.420728 8_4:+49385441 Msa1330230:CDS
GGAAAGAGTAGCAGCTAAAT+CGG 0.425286 8_4:-49385419 None:intergenic
GAACTCATCAATTCCCTTTG+AGG 0.425644 8_4:+49386106 Msa1330230:CDS
TCATGAGAAGTTGGATTTGA+AGG 0.428949 8_4:+49385567 Msa1330230:CDS
TAATGCTCAGGTGGCTGGGA+TGG 0.429440 8_4:+49388989 Msa1330230:CDS
TTTAACCTCAGAACCCAGTT+GGG 0.437728 8_4:-49385455 None:intergenic
GTCGGAGGATCTGATCAATC+AGG 0.439856 8_4:+49387994 Msa1330230:CDS
CCGGCTATTGGTGGTAGTAC+TGG 0.442998 8_4:-49389389 None:intergenic
ATAAGTTGTACCAGACGAAT+AGG 0.451170 8_4:-49387799 None:intergenic
GATGATTGGGGTTATGGTGG+TGG 0.453539 8_4:+49385982 Msa1330230:CDS
TTTGAAATGTGGAGGGAGAA+TGG 0.455545 8_4:+49385381 Msa1330230:exon
GAAAATGAAGAATTTGTTAA+GGG 0.456582 8_4:+49385862 Msa1330230:CDS
CGTTTGAAGTGTTTCCAGAA+AGG 0.459964 8_4:+49388480 Msa1330230:CDS
TGGCAGTATTATCAAAGGTC+TGG 0.460554 8_4:+49387691 Msa1330230:intron
CATTTCACACACACTGCCCC+TGG 0.460590 8_4:+49385222 Msa1330230:five_prime_UTR
CTGCAGGGAAACGAGTGAAT+GGG 0.466298 8_4:-49389456 None:intergenic
GCTGGTTATGGTTATGGTGC+TGG 0.466326 8_4:+49386018 Msa1330230:CDS
TCTCGGCTTACCTATTCGTC+TGG 0.469076 8_4:+49387789 Msa1330230:CDS
TTTAAACTTCAAAACTCCAT+TGG 0.471019 8_4:-49389341 None:intergenic
TCTTCAGCTTCAGGCCTCAA+AGG 0.471838 8_4:-49386120 None:intergenic
GAAGAAAGGGTTGATGTTGA+TGG 0.473079 8_4:+49385886 Msa1330230:CDS
CCTCCGACAGTTGTAGGATC+AGG 0.473817 8_4:-49387979 None:intergenic
TGAGTAGGCGTAGGCATCAA+TGG 0.474024 8_4:-49388114 None:intergenic
ATTTCACCATCCAAAGAATC+GGG 0.474319 8_4:+49388568 Msa1330230:CDS
CTTTCTGGAAACACTTCAAA+CGG 0.476293 8_4:-49388479 None:intergenic
TGCTACTAGGGTTTGAAATG+TGG 0.477590 8_4:+49385370 Msa1330230:five_prime_UTR
GCTCAGGTGGCTGGGATGGG+TGG 0.478265 8_4:+49388993 Msa1330230:CDS
TCATATGCATATTCTTCAGC+AGG 0.479908 8_4:+49389507 Msa1330230:three_prime_UTR
ACTGCAGGGAAACGAGTGAA+TGG 0.486829 8_4:-49389457 None:intergenic
GCTGATGATTGGGGTTATGG+TGG 0.488921 8_4:+49385979 Msa1330230:CDS
GATCAATCAGGGTATGGTAA+TGG 0.497131 8_4:+49388006 Msa1330230:CDS
CAATAACCTTGCATTCTGTC+TGG 0.497455 8_4:-49387069 None:intergenic
GTGGAGTAGTTTCTGATGAA+AGG 0.500681 8_4:+49385644 Msa1330230:CDS
ATTTGTTAAGGGTGAAGAAA+GGG 0.502299 8_4:+49385873 Msa1330230:CDS
GAAAATGAAGAACCTATTAA+GGG 0.504187 8_4:+49385838 Msa1330230:CDS
CATGATCCTCTCTGATAAGT+AGG 0.504294 8_4:-49388381 None:intergenic
GCATATGAATATGACCCAAA+TGG 0.509009 8_4:-49389492 None:intergenic
AGAATCTCTGAAGGGTGAAA+AGG 0.509352 8_4:+49385789 Msa1330230:CDS
TGGCAGAAGCATTTAACTGC+AGG 0.509551 8_4:-49389472 None:intergenic
CTTCAGCTTCAGGCCTCAAA+GGG 0.509655 8_4:-49386119 None:intergenic
CACTATGCACCGGCTATTGG+TGG 0.510349 8_4:-49389398 None:intergenic
AAGGTTGGGATACTAATAGT+TGG 0.510691 8_4:+49385917 Msa1330230:CDS
AAGGCAGGCCCTTGTCACTA+AGG 0.511305 8_4:-49388613 None:intergenic
CAGCTAATGCTCAGGTGGCT+GGG 0.512237 8_4:+49388985 Msa1330230:CDS
AATTTGTTAAGGGTGAAGAA+AGG 0.513417 8_4:+49385872 Msa1330230:CDS
CCCCTAATGATGCCTGGACT+CGG 0.513603 8_4:+49388942 Msa1330230:CDS
TTGCAACCCGATTCTTTGGA+TGG 0.514387 8_4:-49388574 None:intergenic
TATGGTGACGGTTATGGCTA+TGG 0.516935 8_4:+49386054 Msa1330230:CDS
TGTAAGTACAACCACTCAAG+AGG 0.517355 8_4:+49387736 Msa1330230:CDS
TGAACGAGTTGGAGATGAAA+GGG 0.517944 8_4:+49385708 Msa1330230:CDS
AACTTACAGGTCTCAAAGGC+AGG 0.518963 8_4:-49388628 None:intergenic
GATTTGAAGGTTGAAGATGA+AGG 0.520640 8_4:+49385580 Msa1330230:CDS
TGATGGAGACAGCAAAGGTT+GGG 0.522384 8_4:+49385903 Msa1330230:CDS
GTTTCGAACTTTAACGATGG+TGG 0.522618 8_4:+49385625 Msa1330230:CDS
TGGTTATGGTGCTGGATATG+GGG 0.523147 8_4:+49386026 Msa1330230:CDS
GTAGGCATCAATGGAGCAAA+AGG 0.524117 8_4:-49388105 None:intergenic
TGCAAACTCAGCTAATGCTC+AGG 0.524400 8_4:+49388977 Msa1330230:CDS
ATTTGAAGGTTGAAGATGAA+GGG 0.526983 8_4:+49385581 Msa1330230:CDS
TAGGATTGTTGTCCGAGTCC+AGG 0.528151 8_4:-49388954 None:intergenic
TTCATGACATAAGTAGAAGA+TGG 0.528240 8_4:-49388407 None:intergenic
CCCCAAACTTCTGATTGGAA+TGG 0.532005 8_4:+49388147 Msa1330230:CDS
AATTTAATCACCCCATTAGG+AGG 0.533115 8_4:+49386193 Msa1330230:CDS
GAAGAAGACCATGAGGCGAC+AGG 0.533137 8_4:-49388063 None:intergenic
TTGATGGAGACAGCAAAGGT+TGG 0.534457 8_4:+49385902 Msa1330230:CDS
TGGAGTAGTTTCTGATGAAA+GGG 0.537907 8_4:+49385645 Msa1330230:CDS
ACCGTCAGATCTCAATCAAA+CGG 0.540872 8_4:+49385510 Msa1330230:CDS
ACCGGTTAACTTTAATCCAA+AGG 0.541994 8_4:-49389279 None:intergenic
GGTGGAGAATGATGATCAAC+TGG 0.542231 8_4:-49385490 None:intergenic
ACATTCACAACCATCCAAAC+CGG 0.544256 8_4:-49389297 None:intergenic
TGATACACCTCGTAGTGAAA+CGG 0.547266 8_4:-49388034 None:intergenic
TTATATGGGGAATCAGCAAA+GGG 0.549637 8_4:-49385255 None:intergenic
TTTATATGGGGAATCAGCAA+AGG 0.550047 8_4:-49385256 None:intergenic
AAAATCATTGCACTATGCAC+CGG 0.550723 8_4:-49389408 None:intergenic
CACAACAACCTGTCGCCTCA+TGG 0.551262 8_4:+49388055 Msa1330230:CDS
GGTGAAAAGGAAGATGAAGA+AGG 0.551272 8_4:+49385802 Msa1330230:CDS
TCTTGTTCAACAGTTGCCAA+TGG 0.551816 8_4:+49389325 Msa1330230:three_prime_UTR
GTTTAACCTCAGAACCCAGT+TGG 0.552636 8_4:-49385456 None:intergenic
TTTAACGATGGTGAACGAGT+TGG 0.552952 8_4:+49385697 Msa1330230:CDS
GTGAACGAGTTGGAGATGAA+AGG 0.554304 8_4:+49385707 Msa1330230:CDS
GCACTTCCCCTAATGATGCC+TGG 0.554943 8_4:+49388936 Msa1330230:CDS
CAATCAGGGTATGGTAATGG+AGG 0.554965 8_4:+49388009 Msa1330230:CDS
GGATCTGATCAATCAGGGTA+TGG 0.555471 8_4:+49388000 Msa1330230:CDS
TGTGGAGCTTCATGAGAAGT+TGG 0.556036 8_4:+49385558 Msa1330230:CDS
TTAAAGTTAACCGGTTTGGA+TGG 0.556394 8_4:+49389287 Msa1330230:three_prime_UTR
ATCCTCTCTGATAAGTAGGC+AGG 0.557199 8_4:-49388377 None:intergenic
TGGTATGGCAGTATTATCAA+AGG 0.558128 8_4:+49387686 Msa1330230:intron
TATGGTGCTGGATATGGGGA+TGG 0.558685 8_4:+49386030 Msa1330230:CDS
GTAAGTTTGGATCGAACTGT+AGG 0.559636 8_4:+49387947 Msa1330230:CDS
GCAAAGGGAGTGAAGAAACC+AGG 0.560231 8_4:-49385240 None:intergenic
AAAGTTTCGAACTTTAACGA+TGG 0.565585 8_4:+49385622 Msa1330230:CDS
AAAGTTTCGAACTTTAACGA+TGG 0.565585 8_4:+49385685 Msa1330230:CDS
CATCCTGATCCTACAACTGT+CGG 0.566670 8_4:+49387976 Msa1330230:CDS
AAGGAAGAGAAAAGCAGCGA+TGG 0.568512 8_4:+49386084 Msa1330230:CDS
GAGAATGTGAATGAAGAGCT+TGG 0.570679 8_4:+49385943 Msa1330230:CDS
TACTAGGGTTTGAAATGTGG+AGG 0.571004 8_4:+49385373 Msa1330230:five_prime_UTR
GTGCTGTGAACCCTCTTGAG+TGG 0.572535 8_4:-49387747 None:intergenic
GATGAAGAAGGATCTGTTGT+GGG 0.573128 8_4:+49385814 Msa1330230:CDS
GCAGTTTCTTCATTAAAACT+GGG 0.573129 8_4:+49388519 Msa1330230:CDS
TGCCCCTATTACATGCGCAC+TGG 0.574720 8_4:+49387919 Msa1330230:CDS
GGGTGGTCAAATCTACAAGC+TGG 0.574834 8_4:-49388906 None:intergenic
CGCAGGCCAGACAGAATGCA+AGG 0.576542 8_4:+49387063 Msa1330230:CDS
GAAGAACCAGAAGAGAACGC+AGG 0.577511 8_4:+49387046 Msa1330230:CDS
GTGAATGAAGAGCTTGGTGG+TGG 0.580195 8_4:+49385949 Msa1330230:CDS
CCCTTGTCACTAAGGTTGCA+AGG 0.581869 8_4:-49388605 None:intergenic
AAACTGCATTCAGGTTCACC+AGG 0.584269 8_4:-49388503 None:intergenic
GGTAGAGATGCTGATGATTG+GGG 0.586505 8_4:+49385970 Msa1330230:CDS
ACCGTTTGATTGAGATCTGA+CGG 0.592753 8_4:-49385511 None:intergenic
AATGCAGGCTGTTAGGGAGA+AGG 0.594662 8_4:+49387012 Msa1330230:intron
GAATGATGATGAACTTGCTG+TGG 0.596550 8_4:+49385540 Msa1330230:CDS
GGCAGAAGCATTTAACTGCA+GGG 0.596593 8_4:-49389471 None:intergenic
AGCATTAGCTGAGTTTGCAT+AGG 0.596874 8_4:-49388973 None:intergenic
AGCCAGTGCGCATGTAATAG+GGG 0.597843 8_4:-49387921 None:intergenic
TCCTTGCAACCTTAGTGACA+AGG 0.599462 8_4:+49388604 Msa1330230:CDS
TATAGTGTGAGCAGACACTC+TGG 0.600374 8_4:-49388857 None:intergenic
AGAAAGTGCTTAAATTTGTG+TGG 0.600900 8_4:+49389537 Msa1330230:three_prime_UTR
CAGTTTCTTCATTAAAACTG+GGG 0.603026 8_4:+49388520 Msa1330230:CDS
TTTGATGATGGCGAACGAGT+TGG 0.603613 8_4:+49385760 Msa1330230:CDS
TATGGGGATGGTTATGGTGA+CGG 0.605000 8_4:+49386042 Msa1330230:CDS
GCATAACTTACAGGTCTCAA+AGG 0.605332 8_4:-49388632 None:intergenic
GAAGTGTTTCCAGAAAGGCC+TGG 0.609811 8_4:+49388485 Msa1330230:CDS
TGGGGAGCAAGTCCTTGAGT+AGG 0.610371 8_4:-49388129 None:intergenic
AGAACCCCAACTGGGTTCTG+AGG 0.610891 8_4:+49385450 Msa1330230:CDS
CAGTATTATCAAAGGTCTGG+AGG 0.612968 8_4:+49387694 Msa1330230:intron
TGGTGATGAAGAATCTCTGA+AGG 0.613878 8_4:+49385780 Msa1330230:CDS
CTGTCTAAAAGCCTTTGTCA+AGG 0.619448 8_4:+49389045 Msa1330230:exon
TTATGGCTATGGTGATGAGA+AGG 0.619525 8_4:+49386065 Msa1330230:CDS
TCGGAGGATCTGATCAATCA+GGG 0.622808 8_4:+49387995 Msa1330230:CDS
CCAGTACTACCACCAATAGC+CGG 0.624712 8_4:+49389389 Msa1330230:three_prime_UTR
GCAAGTCCTTGAGTAGGCGT+AGG 0.625756 8_4:-49388123 None:intergenic
AAACTCAGCTAATGCTCAGG+TGG 0.626361 8_4:+49388980 Msa1330230:CDS
TGCAGGGAAACGAGTGAATG+GGG 0.626400 8_4:-49389455 None:intergenic
TTGATGCCTACGCCTACTCA+AGG 0.631915 8_4:+49388117 Msa1330230:CDS
TTAACCTCAGAACCCAGTTG+GGG 0.635369 8_4:-49385454 None:intergenic
TTTGAAGGTTGAAGATGAAG+GGG 0.641813 8_4:+49385582 Msa1330230:CDS
CAAAGGGAGTGAAGAAACCA+GGG 0.641898 8_4:-49385239 None:intergenic
CCGAGTCCAGGCATCATTAG+GGG 0.648980 8_4:-49388942 None:intergenic
ACTAGGGTTTGAAATGTGGA+GGG 0.650876 8_4:+49385374 Msa1330230:five_prime_UTR
AGATAGAAGATCCTTGACAA+AGG 0.653962 8_4:-49389056 None:intergenic
AGATGAAGAAGGATCTGTTG+TGG 0.654639 8_4:+49385813 Msa1330230:CDS
CCTTGCAACCTTAGTGACAA+GGG 0.655446 8_4:+49388605 Msa1330230:CDS
AATCAGGGTATGGTAATGGA+GGG 0.663608 8_4:+49388010 Msa1330230:CDS
AACGCCGAAGAACCCCAACT+GGG 0.666568 8_4:+49385442 Msa1330230:CDS
AAAGGGAGTGAAGAAACCAG+GGG 0.669089 8_4:-49385238 None:intergenic
GTAAGTACAACCACTCAAGA+GGG 0.671707 8_4:+49387737 Msa1330230:CDS
CTTTCTTGAAGAAGACCATG+AGG 0.682349 8_4:-49388070 None:intergenic
GGAGGGTCCGTTTCACTACG+AGG 0.682956 8_4:+49388027 Msa1330230:CDS
AGAAAGATCACACACTCACG+CGG 0.685340 8_4:-49385315 None:intergenic
GATGTTGATGGAGACAGCAA+AGG 0.687704 8_4:+49385898 Msa1330230:CDS
CCATTCCAATCAGAAGTTTG+GGG 0.688247 8_4:-49388147 None:intergenic
CACCTGCCTACTTATCAGAG+AGG 0.690749 8_4:+49388375 Msa1330230:CDS
GTGGTAGTACTGGTTAGACA+CGG 0.703362 8_4:-49389379 None:intergenic
CCTGATCCTACAACTGTCGG+AGG 0.708304 8_4:+49387979 Msa1330230:CDS
GGAGTAGTTTCTGATGAAAG+GGG 0.714886 8_4:+49385646 Msa1330230:CDS
GAACGAGTTGGAGATGAAAG+GGG 0.725208 8_4:+49385709 Msa1330230:CDS
AATGTGAATGAAGAGCTTGG+TGG 0.733698 8_4:+49385946 Msa1330230:CDS
GTTTGATTGAGATCTGACGG+TGG 0.735022 8_4:-49385508 None:intergenic
GGTGATGAAGAATCTCTGAA+GGG 0.735452 8_4:+49385781 Msa1330230:CDS
TTGTCACTAAGGTTGCAAGG+AGG 0.772375 8_4:-49388602 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTGATTTTTATCTTT+TGG + chr8_4:49387666-49387685 Msa1330230:intron 10.0%
!!! TACATTTTATTTTAACTTTA+TGG + chr8_4:49389130-49389149 Msa1330230:three_prime_UTR 10.0%
!!! AAATATTCTTTTCTTTGTTT+TGG + chr8_4:49386976-49386995 Msa1330230:intron 15.0%
!! AAATAAAATGTATCATGTTT+AGG - chr8_4:49389122-49389141 None:intergenic 15.0%
!!! AGAAAAAAGGTTTTTATATG+GGG - chr8_4:49385271-49385290 None:intergenic 20.0%
!!! GAGAAAAAAGGTTTTTATAT+GGG - chr8_4:49385272-49385291 None:intergenic 20.0%
!!! TGAGAAAAAAGGTTTTTATA+TGG - chr8_4:49385273-49385292 None:intergenic 20.0%
!! TAACAAAAAAGTGAGAAAAA+AGG - chr8_4:49385284-49385303 None:intergenic 20.0%
!!! TGAAAATGAAGAATTTGTTA+AGG + chr8_4:49385861-49385880 Msa1330230:CDS 20.0%
!!! GAAAATGAAGAATTTGTTAA+GGG + chr8_4:49385862-49385881 Msa1330230:CDS 20.0%
!! TATGACATTGTTGAAATTTA+AGG + chr8_4:49386323-49386342 Msa1330230:intron 20.0%
!! AAAAATCACAATTCAACATT+AGG - chr8_4:49386476-49386495 None:intergenic 20.0%
!!! TAATGTTGAATTGTGATTTT+TGG + chr8_4:49386475-49386494 Msa1330230:intron 20.0%
!!! CCATTTTTTCAAATTATTAC+GGG - chr8_4:49386580-49386599 None:intergenic 20.0%
!!! GCCATTTTTTCAAATTATTA+CGG - chr8_4:49386581-49386600 None:intergenic 20.0%
!! ATTCCTTGATTAATAATTAC+TGG + chr8_4:49387408-49387427 Msa1330230:intron 20.0%
!!! TTGATTTTTATCTTTTGGTA+TGG + chr8_4:49387671-49387690 Msa1330230:intron 20.0%
!! GATATTATATATCTTCTCAA+TGG - chr8_4:49387827-49387846 None:intergenic 20.0%
!!! TTTAAAATGTTTTGTGTTAC+AGG + chr8_4:49387885-49387904 Msa1330230:intron 20.0%
!!! TTAAAATGTTTTGTGTTACA+GGG + chr8_4:49387886-49387905 Msa1330230:intron 20.0%
!! AAACATTTGTTTCAATAGTT+GGG - chr8_4:49388436-49388455 None:intergenic 20.0%
!! TAAACATTTGTTTCAATAGT+TGG - chr8_4:49388437-49388456 None:intergenic 20.0%
!!! ATCTTTAAAAGATAATTGAC+AGG + chr8_4:49388676-49388695 Msa1330230:intron 20.0%
!!! TCTTTAAAAGATAATTGACA+GGG + chr8_4:49388677-49388696 Msa1330230:intron 20.0%
!!! AGTTTTTTTTTGAAGTAGAT+TGG + chr8_4:49388790-49388809 Msa1330230:intron 20.0%
!!! TTTTATTTGTCTTTAAATCC+AGG + chr8_4:49388833-49388852 Msa1330230:intron 20.0%
!! ATCTCTTATGTATTTATTAC+AGG + chr8_4:49389214-49389233 Msa1330230:three_prime_UTR 20.0%
! AAAAATCAATTTCTGCTACT+AGG + chr8_4:49385357-49385376 Msa1330230:five_prime_UTR 25.0%
! AAAATCAATTTCTGCTACTA+GGG + chr8_4:49385358-49385377 Msa1330230:five_prime_UTR 25.0%
!!! AAAGTTTTGAACTTTGATGA+TGG + chr8_4:49385748-49385767 Msa1330230:CDS 25.0%
! TGAAAATGAAGAACCTATTA+AGG + chr8_4:49385837-49385856 Msa1330230:CDS 25.0%
! GAAAATGAAGAACCTATTAA+GGG + chr8_4:49385838-49385857 Msa1330230:CDS 25.0%
!! TGTTCATTTTATATGAAGAC+TGG + chr8_4:49386144-49386163 Msa1330230:CDS 25.0%
!! GTTCATTTTATATGAAGACT+GGG + chr8_4:49386145-49386164 Msa1330230:CDS 25.0%
!! GAAAATAAATAACCTGGTTT+TGG - chr8_4:49386224-49386243 None:intergenic 25.0%
! GAAAGAGAAAATAAATAACC+TGG - chr8_4:49386230-49386249 None:intergenic 25.0%
! TCAACAATGTCATATCTAAA+GGG - chr8_4:49386317-49386336 None:intergenic 25.0%
! TTCAACAATGTCATATCTAA+AGG - chr8_4:49386318-49386337 None:intergenic 25.0%
!!! CTGAATGTAGTATTTTTGAT+TGG + chr8_4:49386411-49386430 Msa1330230:intron 25.0%
! CCCGTAATAATTTGAAAAAA+TGG + chr8_4:49386577-49386596 Msa1330230:intron 25.0%
!! AGAGAAAGTTTTACTTTAGA+AGG + chr8_4:49386861-49386880 Msa1330230:intron 25.0%
!!! GAGAAAGTTTTACTTTAGAA+GGG + chr8_4:49386862-49386881 Msa1330230:intron 25.0%
! GGAAATGAAAAAAACATGTT+AGG - chr8_4:49387244-49387263 None:intergenic 25.0%
! GATCATTTATGTTCAATCTT+AGG + chr8_4:49387285-49387304 Msa1330230:intron 25.0%
! TTATCAATATTATCCTTGCT+AGG - chr8_4:49387602-49387621 None:intergenic 25.0%
! AGCAAGGATAATATTGATAA+TGG + chr8_4:49387602-49387621 Msa1330230:intron 25.0%
!!! AGAAAGTTAAGTTCTGAAAT+TGG - chr8_4:49387772-49387791 None:intergenic 25.0%
! ATTTCAGAACTTAACTTTCT+CGG + chr8_4:49387772-49387791 Msa1330230:CDS 25.0%
! TAAGATCGCATAATAGAAAA+TGG - chr8_4:49388263-49388282 None:intergenic 25.0%
! AATATGTAACTCATGGAAAA+GGG - chr8_4:49388291-49388310 None:intergenic 25.0%
! AATAAACTCTAGTAACTACT+AGG - chr8_4:49388711-49388730 None:intergenic 25.0%
! GTTATGGAATTTGCAAATTT+GGG + chr8_4:49388883-49388902 Msa1330230:CDS 25.0%
! AAAAAAAAACTAGAGGTTCT+GGG - chr8_4:49389099-49389118 None:intergenic 25.0%
! GTTTAGGAAAAAAAAACTAG+AGG - chr8_4:49389106-49389125 None:intergenic 25.0%
!!! GATTGATTATCTGTTATTTC+TGG + chr8_4:49389254-49389273 Msa1330230:three_prime_UTR 25.0%
! TTTAAACTTCAAAACTCCAT+TGG - chr8_4:49389344-49389363 None:intergenic 25.0%
!!! AGTTTTGAAGTTTAAAAGTC+AGG + chr8_4:49389348-49389367 Msa1330230:three_prime_UTR 25.0%
!!! GTTTTGAAGTTTAAAAGTCA+GGG + chr8_4:49389349-49389368 Msa1330230:three_prime_UTR 25.0%
ATTTGAAGGTTGAAGATGAA+GGG + chr8_4:49385581-49385600 Msa1330230:CDS 30.0%
AAAGTTTCGAACTTTAACGA+TGG + chr8_4:49385622-49385641 Msa1330230:CDS 30.0%
AAAGTTTCGAACTTTAACGA+TGG + chr8_4:49385622-49385641 Msa1330230:CDS 30.0%
! TCTTCATTTTCACCCTTAAT+AGG - chr8_4:49385853-49385872 None:intergenic 30.0%
!! AATTTGTTAAGGGTGAAGAA+AGG + chr8_4:49385872-49385891 Msa1330230:CDS 30.0%
! ATTTGTTAAGGGTGAAGAAA+GGG + chr8_4:49385873-49385892 Msa1330230:CDS 30.0%
!!! TTTTGGTTTTTCCTCCTAAT+GGG - chr8_4:49386207-49386226 None:intergenic 30.0%
!! GTATTTTTGATTGGAAGAAC+TGG + chr8_4:49386420-49386439 Msa1330230:intron 30.0%
AATAACTGTTGCATCTTTGT+TGG + chr8_4:49386444-49386463 Msa1330230:intron 30.0%
TGATATTGTTAGTGTCATGT+CGG + chr8_4:49386622-49386641 Msa1330230:intron 30.0%
!!! TGCCTTTAAAATGTCTGTTT+TGG + chr8_4:49386723-49386742 Msa1330230:intron 30.0%
AGAACTAACTAATCAAGCAA+TGG - chr8_4:49386766-49386785 None:intergenic 30.0%
! ACTAGGAGTATAACTAAAGT+CGG - chr8_4:49386790-49386809 None:intergenic 30.0%
ATATAGTAGAAGATCTCACT+AGG - chr8_4:49386807-49386826 None:intergenic 30.0%
TAGTGAGATCTTCTACTATA+TGG + chr8_4:49386806-49386825 Msa1330230:intron 30.0%
ACATAGCAAACATGTTCTAT+TGG + chr8_4:49386912-49386931 Msa1330230:intron 30.0%
!!! TTCTATTGGCTTTTATGACT+GGG + chr8_4:49386926-49386945 Msa1330230:intron 30.0%
! ACTTTTACTTGTAGTACCAA+GGG + chr8_4:49387337-49387356 Msa1330230:intron 30.0%
CAGCCAGTAATTATTAATCA+AGG - chr8_4:49387414-49387433 None:intergenic 30.0%
! TTAATAATTACTGGCTGCTT+AGG + chr8_4:49387417-49387436 Msa1330230:intron 30.0%
! GGATTAATAGATGTCACTTA+TGG + chr8_4:49387438-49387457 Msa1330230:intron 30.0%
!!! TGGTTGTTTGGTTTTTACAA+TGG + chr8_4:49387532-49387551 Msa1330230:intron 30.0%
TTTATTATGCTTTCCTAGCA+AGG + chr8_4:49387586-49387605 Msa1330230:intron 30.0%
AAAAAATAATCCTTGCCAGA+TGG - chr8_4:49388207-49388226 None:intergenic 30.0%
ATATGTAACTCATGGAAAAG+GGG - chr8_4:49388290-49388309 None:intergenic 30.0%
GAATATGTAACTCATGGAAA+AGG - chr8_4:49388292-49388311 None:intergenic 30.0%
TTGGTAGAATATGTAACTCA+TGG - chr8_4:49388298-49388317 None:intergenic 30.0%
ACAGACAAGTCAAATTGATT+AGG - chr8_4:49388343-49388362 None:intergenic 30.0%
!! TAATCAATTTGACTTGTCTG+TGG + chr8_4:49388342-49388361 Msa1330230:intron 30.0%
TTCATGACATAAGTAGAAGA+TGG - chr8_4:49388410-49388429 None:intergenic 30.0%
TTAATGAAGAAACTGCATTC+AGG - chr8_4:49388515-49388534 None:intergenic 30.0%
TGCAGTTTCTTCATTAAAAC+TGG + chr8_4:49388518-49388537 Msa1330230:CDS 30.0%
GCAGTTTCTTCATTAAAACT+GGG + chr8_4:49388519-49388538 Msa1330230:CDS 30.0%
CAGTTTCTTCATTAAAACTG+GGG + chr8_4:49388520-49388539 Msa1330230:CDS 30.0%
AATTTCACCATCCAAAGAAT+CGG + chr8_4:49388567-49388586 Msa1330230:CDS 30.0%
! TTAGTATGATTAGTCGTATG+AGG + chr8_4:49388749-49388768 Msa1330230:intron 30.0%
CGTTATGGAATTTGCAAATT+TGG + chr8_4:49388882-49388901 Msa1330230:CDS 30.0%
! TCAAGGATCTTCTATCTTTT+TGG + chr8_4:49389062-49389081 Msa1330230:three_prime_UTR 30.0%
GAAAAAAAAACTAGAGGTTC+TGG - chr8_4:49389100-49389119 None:intergenic 30.0%
TCCTTTGGATTAAAGTTAAC+CGG + chr8_4:49389278-49389297 Msa1330230:three_prime_UTR 30.0%
!! AGAAAGTGCTTAAATTTGTG+TGG + chr8_4:49389537-49389556 Msa1330230:three_prime_UTR 30.0%
TTATATGGGGAATCAGCAAA+GGG - chr8_4:49385258-49385277 None:intergenic 35.0%
TTTATATGGGGAATCAGCAA+AGG - chr8_4:49385259-49385278 None:intergenic 35.0%
TCATGAGAAGTTGGATTTGA+AGG + chr8_4:49385567-49385586 Msa1330230:CDS 35.0%
GATTTGAAGGTTGAAGATGA+AGG + chr8_4:49385580-49385599 Msa1330230:CDS 35.0%
TTTGAAGGTTGAAGATGAAG+GGG + chr8_4:49385582-49385601 Msa1330230:CDS 35.0%
TGGAGTAGTTTCTGATGAAA+GGG + chr8_4:49385645-49385664 Msa1330230:CDS 35.0%
AAGGTTGGGATACTAATAGT+TGG + chr8_4:49385917-49385936 Msa1330230:CDS 35.0%
AATGAACAATCTTCAGCTTC+AGG - chr8_4:49386132-49386151 None:intergenic 35.0%
GCAAATTTAATCACCCCATT+AGG + chr8_4:49386190-49386209 Msa1330230:CDS 35.0%
AATTTAATCACCCCATTAGG+AGG + chr8_4:49386193-49386212 Msa1330230:CDS 35.0%
!!! TTTGGTTTTTCCTCCTAATG+GGG - chr8_4:49386206-49386225 None:intergenic 35.0%
!!! GTTTTGGTTTTTCCTCCTAA+TGG - chr8_4:49386208-49386227 None:intergenic 35.0%
!! ACAAAGACAAAGGGTATTTG+GGG - chr8_4:49386372-49386391 None:intergenic 35.0%
!! CACAAAGACAAAGGGTATTT+GGG - chr8_4:49386373-49386392 None:intergenic 35.0%
ATATCCACCACAAAGACAAA+GGG - chr8_4:49386381-49386400 None:intergenic 35.0%
AATATCCACCACAAAGACAA+AGG - chr8_4:49386382-49386401 None:intergenic 35.0%
TATGTGCTTCAAAGATTGCA+AGG - chr8_4:49386515-49386534 None:intergenic 35.0%
!! CAATCTTTGAAGCACATACA+CGG + chr8_4:49386517-49386536 Msa1330230:intron 35.0%
! ACGACTTCTATTAGAAGTGT+CGG + chr8_4:49386676-49386695 Msa1330230:intron 35.0%
! GGCCAAAACAGACATTTTAA+AGG - chr8_4:49386728-49386747 None:intergenic 35.0%
ATCTTCTACTATATGGCGTA+AGG + chr8_4:49386813-49386832 Msa1330230:intron 35.0%
CTTCGCTAGGGTTATAAAAA+TGG + chr8_4:49386837-49386856 Msa1330230:intron 35.0%
! TTTACTTTAGAAGGGACAGT+AGG + chr8_4:49386870-49386889 Msa1330230:intron 35.0%
!!! GTTCTATTGGCTTTTATGAC+TGG + chr8_4:49386925-49386944 Msa1330230:intron 35.0%
TTACTATCACACTATCACTC+TGG + chr8_4:49387136-49387155 Msa1330230:intron 35.0%
ATAAATGATCTACGACCTCA+AGG - chr8_4:49387275-49387294 None:intergenic 35.0%
! CACTTTTACTTGTAGTACCA+AGG + chr8_4:49387336-49387355 Msa1330230:intron 35.0%
! CTTTTACTTGTAGTACCAAG+GGG + chr8_4:49387338-49387357 Msa1330230:intron 35.0%
TGGTATGGCAGTATTATCAA+AGG + chr8_4:49387686-49387705 Msa1330230:intron 35.0%
ATAAGTTGTACCAGACGAAT+AGG - chr8_4:49387802-49387821 None:intergenic 35.0%
TCCATTCCAATCAGAAGTTT+GGG - chr8_4:49388151-49388170 None:intergenic 35.0%
ATCCATTCCAATCAGAAGTT+TGG - chr8_4:49388152-49388171 None:intergenic 35.0%
TTCTGATTGGAATGGATATC+AGG + chr8_4:49388155-49388174 Msa1330230:CDS 35.0%
ATTCAATACCAAAAGCCATC+TGG + chr8_4:49388189-49388208 Msa1330230:intron 35.0%
ACAACTTGTAAGAGTTCAGT+TGG - chr8_4:49388317-49388336 None:intergenic 35.0%
! CTTTCTGGAAACACTTCAAA+CGG - chr8_4:49388482-49388501 None:intergenic 35.0%
ATTTCACCATCCAAAGAATC+GGG + chr8_4:49388568-49388587 Msa1330230:CDS 35.0%
AAAACAGCAGCATAACTTAC+AGG - chr8_4:49388644-49388663 None:intergenic 35.0%
TATGAGGCTACTAAGTAGAT+TGG + chr8_4:49388765-49388784 Msa1330230:intron 35.0%
AGATAGAAGATCCTTGACAA+AGG - chr8_4:49389059-49389078 None:intergenic 35.0%
!! TCTGTTATTTCTGGTTCCTT+TGG + chr8_4:49389263-49389282 Msa1330230:three_prime_UTR 35.0%
ACCGGTTAACTTTAATCCAA+AGG - chr8_4:49389282-49389301 None:intergenic 35.0%
TGGATTAAAGTTAACCGGTT+TGG + chr8_4:49389283-49389302 Msa1330230:three_prime_UTR 35.0%
!! TTAAAGTTAACCGGTTTGGA+TGG + chr8_4:49389287-49389306 Msa1330230:three_prime_UTR 35.0%
AAAATCATTGCACTATGCAC+CGG - chr8_4:49389411-49389430 None:intergenic 35.0%
AGTTAAATGCTTCTGCCATT+TGG + chr8_4:49389477-49389496 Msa1330230:three_prime_UTR 35.0%
! GTTAAATGCTTCTGCCATTT+GGG + chr8_4:49389478-49389497 Msa1330230:three_prime_UTR 35.0%
GCATATGAATATGACCCAAA+TGG - chr8_4:49389495-49389514 None:intergenic 35.0%
TCATATGCATATTCTTCAGC+AGG + chr8_4:49389507-49389526 Msa1330230:three_prime_UTR 35.0%
! TGCTACTAGGGTTTGAAATG+TGG + chr8_4:49385370-49385389 Msa1330230:five_prime_UTR 40.0%
! TACTAGGGTTTGAAATGTGG+AGG + chr8_4:49385373-49385392 Msa1330230:five_prime_UTR 40.0%
! ACTAGGGTTTGAAATGTGGA+GGG + chr8_4:49385374-49385393 Msa1330230:five_prime_UTR 40.0%
! TTTGAAATGTGGAGGGAGAA+TGG + chr8_4:49385381-49385400 Msa1330230:exon 40.0%
GGAAAGAGTAGCAGCTAAAT+CGG - chr8_4:49385422-49385441 None:intergenic 40.0%
TTTAACCTCAGAACCCAGTT+GGG - chr8_4:49385458-49385477 None:intergenic 40.0%
ACCGTCAGATCTCAATCAAA+CGG + chr8_4:49385510-49385529 Msa1330230:CDS 40.0%
ACCGTTTGATTGAGATCTGA+CGG - chr8_4:49385514-49385533 None:intergenic 40.0%
!! GAATGATGATGAACTTGCTG+TGG + chr8_4:49385540-49385559 Msa1330230:CDS 40.0%
GTTTCGAACTTTAACGATGG+TGG + chr8_4:49385625-49385644 Msa1330230:CDS 40.0%
GTGGAGTAGTTTCTGATGAA+AGG + chr8_4:49385644-49385663 Msa1330230:CDS 40.0%
GGAGTAGTTTCTGATGAAAG+GGG + chr8_4:49385646-49385665 Msa1330230:CDS 40.0%
TTTAACGATGGTGAACGAGT+TGG + chr8_4:49385697-49385716 Msa1330230:CDS 40.0%
! TGAACGAGTTGGAGATGAAA+GGG + chr8_4:49385708-49385727 Msa1330230:CDS 40.0%
! TGGTGATGAAGAATCTCTGA+AGG + chr8_4:49385780-49385799 Msa1330230:CDS 40.0%
GGTGATGAAGAATCTCTGAA+GGG + chr8_4:49385781-49385800 Msa1330230:CDS 40.0%
! AGAATCTCTGAAGGGTGAAA+AGG + chr8_4:49385789-49385808 Msa1330230:CDS 40.0%
GGTGAAAAGGAAGATGAAGA+AGG + chr8_4:49385802-49385821 Msa1330230:CDS 40.0%
AGATGAAGAAGGATCTGTTG+TGG + chr8_4:49385813-49385832 Msa1330230:CDS 40.0%
GATGAAGAAGGATCTGTTGT+GGG + chr8_4:49385814-49385833 Msa1330230:CDS 40.0%
!! GAAGAAAGGGTTGATGTTGA+TGG + chr8_4:49385886-49385905 Msa1330230:CDS 40.0%
GAGAATGTGAATGAAGAGCT+TGG + chr8_4:49385943-49385962 Msa1330230:CDS 40.0%
AATGTGAATGAAGAGCTTGG+TGG + chr8_4:49385946-49385965 Msa1330230:CDS 40.0%
TGGTAGAGATGCTGATGATT+GGG + chr8_4:49385969-49385988 Msa1330230:CDS 40.0%
! TATGGTTATGGTGCTGGATA+TGG + chr8_4:49386024-49386043 Msa1330230:CDS 40.0%
! ATGGTTATGGTGCTGGATAT+GGG + chr8_4:49386025-49386044 Msa1330230:CDS 40.0%
! TTATGGCTATGGTGATGAGA+AGG + chr8_4:49386065-49386084 Msa1330230:CDS 40.0%
GAACTCATCAATTCCCTTTG+AGG + chr8_4:49386106-49386125 Msa1330230:CDS 40.0%
TAGGAGGAAAAACCAAAACC+AGG + chr8_4:49386209-49386228 Msa1330230:CDS 40.0%
!! CCACAAAGACAAAGGGTATT+TGG - chr8_4:49386374-49386393 None:intergenic 40.0%
CCAAATACCCTTTGTCTTTG+TGG + chr8_4:49386371-49386390 Msa1330230:intron 40.0%
AATACCCTTTGTCTTTGTGG+TGG + chr8_4:49386374-49386393 Msa1330230:intron 40.0%
GTGTCAGACACTAACATTGT+CGG + chr8_4:49386644-49386663 Msa1330230:intron 40.0%
CAATGGCACAGACAAAAAAG+AGG - chr8_4:49386749-49386768 None:intergenic 40.0%
!!! GGTGTTTTGACTACAAATGC+AGG + chr8_4:49386997-49387016 Msa1330230:intron 40.0%
ACTACAAATGCAGGCTGTTA+GGG + chr8_4:49387006-49387025 Msa1330230:intron 40.0%
CAATAACCTTGCATTCTGTC+TGG - chr8_4:49387072-49387091 None:intergenic 40.0%
ATAAACCTTGCACACAGTCA+CGG - chr8_4:49387207-49387226 None:intergenic 40.0%
! GTAAAAGTGCAGAACAACGT+CGG - chr8_4:49387325-49387344 None:intergenic 40.0%
TATGTCCTACTCTTTAACCC+AGG - chr8_4:49387365-49387384 None:intergenic 40.0%
TTATGGACACTCTGATTCTC+AGG + chr8_4:49387455-49387474 Msa1330230:intron 40.0%
AGGAAGCAAACATGGTTGTT+TGG + chr8_4:49387520-49387539 Msa1330230:intron 40.0%
TGGCAGTATTATCAAAGGTC+TGG + chr8_4:49387691-49387710 Msa1330230:intron 40.0%
CAGTATTATCAAAGGTCTGG+AGG + chr8_4:49387694-49387713 Msa1330230:intron 40.0%
TGTAAGTACAACCACTCAAG+AGG + chr8_4:49387736-49387755 Msa1330230:CDS 40.0%
GTAAGTACAACCACTCAAGA+GGG + chr8_4:49387737-49387756 Msa1330230:CDS 40.0%
GTAAGTTTGGATCGAACTGT+AGG + chr8_4:49387947-49387966 Msa1330230:CDS 40.0%
GATCAATCAGGGTATGGTAA+TGG + chr8_4:49388006-49388025 Msa1330230:CDS 40.0%
!! AATCAGGGTATGGTAATGGA+GGG + chr8_4:49388010-49388029 Msa1330230:CDS 40.0%
TGATACACCTCGTAGTGAAA+CGG - chr8_4:49388037-49388056 None:intergenic 40.0%
CTTTCTTGAAGAAGACCATG+AGG - chr8_4:49388073-49388092 None:intergenic 40.0%
CCATTCCAATCAGAAGTTTG+GGG - chr8_4:49388150-49388169 None:intergenic 40.0%
! GACTTGTCTGTGGTTTGTAA+AGG + chr8_4:49388352-49388371 Msa1330230:intron 40.0%
CATGATCCTCTCTGATAAGT+AGG - chr8_4:49388384-49388403 None:intergenic 40.0%
! CGTTTGAAGTGTTTCCAGAA+AGG + chr8_4:49388480-49388499 Msa1330230:CDS 40.0%
AACTTTGCAACCCGATTCTT+TGG - chr8_4:49388581-49388600 None:intergenic 40.0%
GCATAACTTACAGGTCTCAA+AGG - chr8_4:49388635-49388654 None:intergenic 40.0%
!!! TGCTGCTGTTTTTGCTTCTA+TGG + chr8_4:49388652-49388671 Msa1330230:intron 40.0%
TGCTCACACTATAGTCGTTA+TGG + chr8_4:49388867-49388886 Msa1330230:CDS 40.0%
AGCATTAGCTGAGTTTGCAT+AGG - chr8_4:49388976-49388995 None:intergenic 40.0%
CTGTCTAAAAGCCTTTGTCA+AGG + chr8_4:49389045-49389064 Msa1330230:exon 40.0%
ACATTCACAACCATCCAAAC+CGG - chr8_4:49389300-49389319 None:intergenic 40.0%
TCTTGTTCAACAGTTGCCAA+TGG + chr8_4:49389325-49389344 Msa1330230:three_prime_UTR 40.0%
AAAGGGAGTGAAGAAACCAG+GGG - chr8_4:49385241-49385260 None:intergenic 45.0%
CAAAGGGAGTGAAGAAACCA+GGG - chr8_4:49385242-49385261 None:intergenic 45.0%
AGAAAGATCACACACTCACG+CGG - chr8_4:49385318-49385337 None:intergenic 45.0%
TTAACCTCAGAACCCAGTTG+GGG - chr8_4:49385457-49385476 None:intergenic 45.0%
GTTTAACCTCAGAACCCAGT+TGG - chr8_4:49385459-49385478 None:intergenic 45.0%
GGTGGAGAATGATGATCAAC+TGG - chr8_4:49385493-49385512 None:intergenic 45.0%
GTTTGATTGAGATCTGACGG+TGG - chr8_4:49385511-49385530 None:intergenic 45.0%
TGTGGAGCTTCATGAGAAGT+TGG + chr8_4:49385558-49385577 Msa1330230:CDS 45.0%
! GTGAACGAGTTGGAGATGAA+AGG + chr8_4:49385707-49385726 Msa1330230:CDS 45.0%
! GAACGAGTTGGAGATGAAAG+GGG + chr8_4:49385709-49385728 Msa1330230:CDS 45.0%
!! TTTGATGATGGCGAACGAGT+TGG + chr8_4:49385760-49385779 Msa1330230:CDS 45.0%
! GATGTTGATGGAGACAGCAA+AGG + chr8_4:49385898-49385917 Msa1330230:CDS 45.0%
TTGATGGAGACAGCAAAGGT+TGG + chr8_4:49385902-49385921 Msa1330230:CDS 45.0%
TGATGGAGACAGCAAAGGTT+GGG + chr8_4:49385903-49385922 Msa1330230:CDS 45.0%
GTGGTAGAGATGCTGATGAT+TGG + chr8_4:49385968-49385987 Msa1330230:CDS 45.0%
GGTAGAGATGCTGATGATTG+GGG + chr8_4:49385970-49385989 Msa1330230:CDS 45.0%
GATGCTGATGATTGGGGTTA+TGG + chr8_4:49385976-49385995 Msa1330230:CDS 45.0%
! TGGTTATGGTGCTGGATATG+GGG + chr8_4:49386026-49386045 Msa1330230:CDS 45.0%
TATGGGGATGGTTATGGTGA+CGG + chr8_4:49386042-49386061 Msa1330230:CDS 45.0%
!! GATGGTTATGGTGACGGTTA+TGG + chr8_4:49386048-49386067 Msa1330230:CDS 45.0%
!! TATGGTGACGGTTATGGCTA+TGG + chr8_4:49386054-49386073 Msa1330230:CDS 45.0%
AAGGAAGAGAAAAGCAGCGA+TGG + chr8_4:49386084-49386103 Msa1330230:CDS 45.0%
AAGACTGGGAGTTGCAAGTT+TGG + chr8_4:49386159-49386178 Msa1330230:CDS 45.0%
!! CAAAGGGTATTTGGGGCAAA+AGG - chr8_4:49386365-49386384 None:intergenic 45.0%
GACTACAAATGCAGGCTGTT+AGG + chr8_4:49387005-49387024 Msa1330230:intron 45.0%
TAAACCTTGCACACAGTCAC+GGG - chr8_4:49387206-49387225 None:intergenic 45.0%
CATTTCCTTGTGTCACCTTG+AGG + chr8_4:49387257-49387276 Msa1330230:intron 45.0%
TGTACATTAGCCACGAACAG+AGG + chr8_4:49387500-49387519 Msa1330230:intron 45.0%
ATGTTTGCTTCCTCTGTTCG+TGG - chr8_4:49387513-49387532 None:intergenic 45.0%
ACGAACAGAGGAAGCAAACA+TGG + chr8_4:49387512-49387531 Msa1330230:intron 45.0%
AGGTCTGGAGGTTGTAAGTT+TGG + chr8_4:49387706-49387725 Msa1330230:CDS 45.0%
CATCCTGATCCTACAACTGT+CGG + chr8_4:49387976-49387995 Msa1330230:CDS 45.0%
TCGGAGGATCTGATCAATCA+GGG + chr8_4:49387995-49388014 Msa1330230:CDS 45.0%
GGATCTGATCAATCAGGGTA+TGG + chr8_4:49388000-49388019 Msa1330230:CDS 45.0%
!! CAATCAGGGTATGGTAATGG+AGG + chr8_4:49388009-49388028 Msa1330230:CDS 45.0%
GTAGGCATCAATGGAGCAAA+AGG - chr8_4:49388108-49388127 None:intergenic 45.0%
TTGCTCCCCAAACTTCTGAT+TGG + chr8_4:49388142-49388161 Msa1330230:CDS 45.0%
CCCCAAACTTCTGATTGGAA+TGG + chr8_4:49388147-49388166 Msa1330230:CDS 45.0%
ATACCAAAAGCCATCTGGCA+AGG + chr8_4:49388194-49388213 Msa1330230:intron 45.0%
! AATCCTTGCCAGATGGCTTT+TGG - chr8_4:49388200-49388219 None:intergenic 45.0%
ATCCTCTCTGATAAGTAGGC+AGG - chr8_4:49388380-49388399 None:intergenic 45.0%
!! CAAACGGCATCTGCTTTTGA+TGG - chr8_4:49388466-49388485 None:intergenic 45.0%
! AAACTGCATTCAGGTTCACC+AGG - chr8_4:49388506-49388525 None:intergenic 45.0%
TTGCAACCCGATTCTTTGGA+TGG - chr8_4:49388577-49388596 None:intergenic 45.0%
TTGTCACTAAGGTTGCAAGG+AGG - chr8_4:49388605-49388624 None:intergenic 45.0%
TCCTTGCAACCTTAGTGACA+AGG + chr8_4:49388604-49388623 Msa1330230:CDS 45.0%
CCTTGCAACCTTAGTGACAA+GGG + chr8_4:49388605-49388624 Msa1330230:CDS 45.0%
AACTTACAGGTCTCAAAGGC+AGG - chr8_4:49388631-49388650 None:intergenic 45.0%
TATAGTGTGAGCAGACACTC+TGG - chr8_4:49388860-49388879 None:intergenic 45.0%
TGCAAACTCAGCTAATGCTC+AGG + chr8_4:49388977-49388996 Msa1330230:CDS 45.0%
AAACTCAGCTAATGCTCAGG+TGG + chr8_4:49388980-49388999 Msa1330230:CDS 45.0%
!! GTGGTAGTACTGGTTAGACA+CGG - chr8_4:49389382-49389401 None:intergenic 45.0%
!! GGCAGAAGCATTTAACTGCA+GGG - chr8_4:49389474-49389493 None:intergenic 45.0%
!! TGGCAGAAGCATTTAACTGC+AGG - chr8_4:49389475-49389494 None:intergenic 45.0%
GCAAAGGGAGTGAAGAAACC+AGG - chr8_4:49385243-49385262 None:intergenic 50.0%
AGAACCCAGTTGGGGTTCTT+CGG - chr8_4:49385449-49385468 None:intergenic 50.0%
! GTGAATGAAGAGCTTGGTGG+TGG + chr8_4:49385949-49385968 Msa1330230:CDS 50.0%
GCTGATGATTGGGGTTATGG+TGG + chr8_4:49385979-49385998 Msa1330230:CDS 50.0%
GATGATTGGGGTTATGGTGG+TGG + chr8_4:49385982-49386001 Msa1330230:CDS 50.0%
!! GGTGGTGCTGGTTATGGTTA+TGG + chr8_4:49386012-49386031 Msa1330230:CDS 50.0%
GCTGGTTATGGTTATGGTGC+TGG + chr8_4:49386018-49386037 Msa1330230:CDS 50.0%
! TATGGTGCTGGATATGGGGA+TGG + chr8_4:49386030-49386049 Msa1330230:CDS 50.0%
GCTGGATATGGGGATGGTTA+TGG + chr8_4:49386036-49386055 Msa1330230:CDS 50.0%
CTTCAGCTTCAGGCCTCAAA+GGG - chr8_4:49386122-49386141 None:intergenic 50.0%
TCTTCAGCTTCAGGCCTCAA+AGG - chr8_4:49386123-49386142 None:intergenic 50.0%
GGCATTGCGATTTGCAAGCT+TGG - chr8_4:49386707-49386726 None:intergenic 50.0%
TATGGCGTAAGGACTTCGCT+AGG + chr8_4:49386824-49386843 Msa1330230:intron 50.0%
ATGGCGTAAGGACTTCGCTA+GGG + chr8_4:49386825-49386844 Msa1330230:intron 50.0%
AATGCAGGCTGTTAGGGAGA+AGG + chr8_4:49387012-49387031 Msa1330230:intron 50.0%
GAAGAACCAGAAGAGAACGC+AGG + chr8_4:49387046-49387065 Msa1330230:CDS 50.0%
AAACCTTGCACACAGTCACG+GGG - chr8_4:49387205-49387224 None:intergenic 50.0%
TACGACCTCAAGGTGACACA+AGG - chr8_4:49387265-49387284 None:intergenic 50.0%
TTGTAGTACCAAGGGGACCT+GGG + chr8_4:49387345-49387364 Msa1330230:intron 50.0%
TCTCGGCTTACCTATTCGTC+TGG + chr8_4:49387789-49387808 Msa1330230:CDS 50.0%
AGCCAGTGCGCATGTAATAG+GGG - chr8_4:49387924-49387943 None:intergenic 50.0%
GAGCCAGTGCGCATGTAATA+GGG - chr8_4:49387925-49387944 None:intergenic 50.0%
AGAGCCAGTGCGCATGTAAT+AGG - chr8_4:49387926-49387945 None:intergenic 50.0%
!! CGCACTGGCTCTTGTAAGTT+TGG + chr8_4:49387934-49387953 Msa1330230:CDS 50.0%
TCAGATCCTCCGACAGTTGT+AGG - chr8_4:49387988-49388007 None:intergenic 50.0%
GTCGGAGGATCTGATCAATC+AGG + chr8_4:49387994-49388013 Msa1330230:CDS 50.0%
TGAGTAGGCGTAGGCATCAA+TGG - chr8_4:49388117-49388136 None:intergenic 50.0%
TTGATGCCTACGCCTACTCA+AGG + chr8_4:49388117-49388136 Msa1330230:CDS 50.0%
CACCTGCCTACTTATCAGAG+AGG + chr8_4:49388375-49388394 Msa1330230:CDS 50.0%
! GAAGTGTTTCCAGAAAGGCC+TGG + chr8_4:49388485-49388504 Msa1330230:CDS 50.0%
CCCTTGTCACTAAGGTTGCA+AGG - chr8_4:49388608-49388627 None:intergenic 50.0%
GGGTGGTCAAATCTACAAGC+TGG - chr8_4:49388909-49388928 None:intergenic 50.0%
! TTAGGGGAAGTGCGCTTTCT+GGG - chr8_4:49388929-49388948 None:intergenic 50.0%
! ATTAGGGGAAGTGCGCTTTC+TGG - chr8_4:49388930-49388949 None:intergenic 50.0%
TCCGAGTCCAGGCATCATTA+GGG - chr8_4:49388946-49388965 None:intergenic 50.0%
TAGGATTGTTGTCCGAGTCC+AGG - chr8_4:49388957-49388976 None:intergenic 50.0%
CCAGTACTACCACCAATAGC+CGG + chr8_4:49389389-49389408 Msa1330230:three_prime_UTR 50.0%
!! TTGCACTATGCACCGGCTAT+TGG - chr8_4:49389404-49389423 None:intergenic 50.0%
TGCAGGGAAACGAGTGAATG+GGG - chr8_4:49389458-49389477 None:intergenic 50.0%
CTGCAGGGAAACGAGTGAAT+GGG - chr8_4:49389459-49389478 None:intergenic 50.0%
ACTGCAGGGAAACGAGTGAA+TGG - chr8_4:49389460-49389479 None:intergenic 50.0%
CATTTCACACACACTGCCCC+TGG + chr8_4:49385222-49385241 Msa1330230:five_prime_UTR 55.0%
AACGCCGAAGAACCCCAACT+GGG + chr8_4:49385442-49385461 Msa1330230:CDS 55.0%
AGAACCCCAACTGGGTTCTG+AGG + chr8_4:49385450-49385469 Msa1330230:CDS 55.0%
!! TGGGGTTATGGTGGTGGTGA+TGG + chr8_4:49385988-49386007 Msa1330230:CDS 55.0%
!! GGTTATGGTGGTGGTGATGG+TGG + chr8_4:49385991-49386010 Msa1330230:CDS 55.0%
!! TATGGTGGTGGTGATGGTGG+TGG + chr8_4:49385994-49386013 Msa1330230:CDS 55.0%
!! GATGGTGGTGGTGCTGGTTA+TGG + chr8_4:49386006-49386025 Msa1330230:CDS 55.0%
CTTGTAGTACCAAGGGGACC+TGG + chr8_4:49387344-49387363 Msa1330230:intron 55.0%
CTCTTTAACCCAGGTCCCCT+TGG - chr8_4:49387356-49387375 None:intergenic 55.0%
GGGGACCTGGGTTAAAGAGT+AGG + chr8_4:49387357-49387376 Msa1330230:intron 55.0%
GTGCTGTGAACCCTCTTGAG+TGG - chr8_4:49387750-49387769 None:intergenic 55.0%
TGCCCCTATTACATGCGCAC+TGG + chr8_4:49387919-49387938 Msa1330230:CDS 55.0%
CCTCCGACAGTTGTAGGATC+AGG - chr8_4:49387982-49388001 None:intergenic 55.0%
CCTGATCCTACAACTGTCGG+AGG + chr8_4:49387979-49387998 Msa1330230:CDS 55.0%
CACAACAACCTGTCGCCTCA+TGG + chr8_4:49388055-49388074 Msa1330230:CDS 55.0%
GAAGAAGACCATGAGGCGAC+AGG - chr8_4:49388066-49388085 None:intergenic 55.0%
GCAAGTCCTTGAGTAGGCGT+AGG - chr8_4:49388126-49388145 None:intergenic 55.0%
TGGGGAGCAAGTCCTTGAGT+AGG - chr8_4:49388132-49388151 None:intergenic 55.0%
TCAGGTTCACCAGGCCTTTC+TGG - chr8_4:49388497-49388516 None:intergenic 55.0%
AAGGCAGGCCCTTGTCACTA+AGG - chr8_4:49388616-49388635 None:intergenic 55.0%
GCACTTCCCCTAATGATGCC+TGG + chr8_4:49388936-49388955 Msa1330230:CDS 55.0%
CCGAGTCCAGGCATCATTAG+GGG - chr8_4:49388945-49388964 None:intergenic 55.0%
CCCCTAATGATGCCTGGACT+CGG + chr8_4:49388942-49388961 Msa1330230:CDS 55.0%
GTCCGAGTCCAGGCATCATT+AGG - chr8_4:49388947-49388966 None:intergenic 55.0%
TCAGCTAATGCTCAGGTGGC+TGG + chr8_4:49388984-49389003 Msa1330230:CDS 55.0%
CAGCTAATGCTCAGGTGGCT+GGG + chr8_4:49388985-49389004 Msa1330230:CDS 55.0%
TAATGCTCAGGTGGCTGGGA+TGG + chr8_4:49388989-49389008 Msa1330230:CDS 55.0%
AATGCTCAGGTGGCTGGGAT+GGG + chr8_4:49388990-49389009 Msa1330230:CDS 55.0%
! CCGGCTATTGGTGGTAGTAC+TGG - chr8_4:49389392-49389411 None:intergenic 55.0%
!! CACTATGCACCGGCTATTGG+TGG - chr8_4:49389401-49389420 None:intergenic 55.0%
CAGTTGGGGTTCTTCGGCGT+TGG - chr8_4:49385443-49385462 None:intergenic 60.0%
CAACGCCGAAGAACCCCAAC+TGG + chr8_4:49385441-49385460 Msa1330230:CDS 60.0%
GTCTGGCCTGCGTTCTCTTC+TGG - chr8_4:49387055-49387074 None:intergenic 60.0%
CGCAGGCCAGACAGAATGCA+AGG + chr8_4:49387063-49387082 Msa1330230:CDS 60.0%
GTTCCCCGTGACTGTGTGCA+AGG + chr8_4:49387199-49387218 Msa1330230:intron 60.0%
GGAGGGTCCGTTTCACTACG+AGG + chr8_4:49388027-49388046 Msa1330230:CDS 60.0%
GTGAGCAGACACTCTGGTCC+TGG - chr8_4:49388854-49388873 None:intergenic 60.0%
!! GGTGGTGATGGTGGTGGTGC+TGG + chr8_4:49386000-49386019 Msa1330230:CDS 65.0%
! GGGGAAGTGCGCTTTCTGGG+TGG - chr8_4:49388926-49388945 None:intergenic 65.0%
GCTCAGGTGGCTGGGATGGG+TGG + chr8_4:49388993-49389012 Msa1330230:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 49385213 49389622 49385213 ID=Msa1330230;Name=Msa1330230
chr8_4 mRNA 49385213 49389622 49385213 ID=Msa1330230-mRNA-1;Parent=Msa1330230;Name=Msa1330230-mRNA-1;_AED=0.06;_eAED=0.06;_QI=187|1|1|1|1|1|6|570|582
chr8_4 exon 49385213 49386230 49385213 ID=Msa1330230-mRNA-1:exon:14236;Parent=Msa1330230-mRNA-1
chr8_4 exon 49387019 49387084 49387019 ID=Msa1330230-mRNA-1:exon:14237;Parent=Msa1330230-mRNA-1
chr8_4 exon 49387697 49387810 49387697 ID=Msa1330230-mRNA-1:exon:14238;Parent=Msa1330230-mRNA-1
chr8_4 exon 49387907 49388176 49387907 ID=Msa1330230-mRNA-1:exon:14239;Parent=Msa1330230-mRNA-1
chr8_4 exon 49388374 49388643 49388374 ID=Msa1330230-mRNA-1:exon:14240;Parent=Msa1330230-mRNA-1
chr8_4 exon 49388855 49389622 49388855 ID=Msa1330230-mRNA-1:exon:14241;Parent=Msa1330230-mRNA-1
chr8_4 five_prime_UTR 49385213 49385399 49385213 ID=Msa1330230-mRNA-1:five_prime_utr;Parent=Msa1330230-mRNA-1
chr8_4 CDS 49385400 49386230 49385400 ID=Msa1330230-mRNA-1:cds;Parent=Msa1330230-mRNA-1
chr8_4 CDS 49387019 49387084 49387019 ID=Msa1330230-mRNA-1:cds;Parent=Msa1330230-mRNA-1
chr8_4 CDS 49387697 49387810 49387697 ID=Msa1330230-mRNA-1:cds;Parent=Msa1330230-mRNA-1
chr8_4 CDS 49387907 49388176 49387907 ID=Msa1330230-mRNA-1:cds;Parent=Msa1330230-mRNA-1
chr8_4 CDS 49388374 49388643 49388374 ID=Msa1330230-mRNA-1:cds;Parent=Msa1330230-mRNA-1
chr8_4 CDS 49388855 49389052 49388855 ID=Msa1330230-mRNA-1:cds;Parent=Msa1330230-mRNA-1
chr8_4 three_prime_UTR 49389053 49389622 49389053 ID=Msa1330230-mRNA-1:three_prime_utr;Parent=Msa1330230-mRNA-1
Gene Sequence

>Msa1330230

ATGGAACACTCTGAAGAAACCGATTTAGCTGCTACTCTTTCCAACGCCGAAGAACCCCAACTGGGTTCTGAGGTTAAACAATCTTCTTCACCAGTTGATCATCATTCTCCACCGTCAGATCTCAATCAAACGGTTCAAAAGAATGATGATGAACTTGCTGTGGAGCTTCATGAGAAGTTGGATTTGAAGGTTGAAGATGAAGGGGTTGTTGAAACTGATGATAAAGTTTCGAACTTTAACGATGGTGGAGTAGTTTCTGATGAAAGGGGTGCTGAAATTGATGATAAAGTTTCGAACTTTAACGATGGTGAACGAGTTGGAGATGAAAGGGGTGCTGAAACTGATGATAAAGTTTTGAACTTTGATGATGGCGAACGAGTTGGTGATGAAGAATCTCTGAAGGGTGAAAAGGAAGATGAAGAAGGATCTGTTGTGGGTGAAAATGAAGAACCTATTAAGGGTGAAAATGAAGAATTTGTTAAGGGTGAAGAAAGGGTTGATGTTGATGGAGACAGCAAAGGTTGGGATACTAATAGTTGGAATGAGAATGTGAATGAAGAGCTTGGTGGTGGTAGAGATGCTGATGATTGGGGTTATGGTGGTGGTGATGGTGGTGGTGCTGGTTATGGTTATGGTGCTGGATATGGGGATGGTTATGGTGACGGTTATGGCTATGGTGATGAGAAGGAAGAGAAAAGCAGCGATGGAACTCATCAATTCCCTTTGAGGCCTGAAGCTGAAGATTGTTCATTTTATATGAAGACTGGGAGTTGCAAGTTTGGATTCAACTGCAAATTTAATCACCCCATTAGGAGGAAAAACCAAAACCAGGCTGTTAGGGAGAAGGTGCGAGAAAGAGAAGAACCAGAAGAGAACGCAGGCCAGACAGAATGCAAGTATTATCAAAGGTCTGGAGGTTGTAAGTTTGGAAAAGCTTGTAAGTACAACCACTCAAGAGGGTTCACAGCACCAATTTCAGAACTTAACTTTCTCGGCTTACCTATTCGTCTGGGAGAGAGAGAGTGCCCCTATTACATGCGCACTGGCTCTTGTAAGTTTGGATCGAACTGTAGGTTTAATCATCCTGATCCTACAACTGTCGGAGGATCTGATCAATCAGGGTATGGTAATGGAGGGTCCGTTTCACTACGAGGTGTATCACAACAACCTGTCGCCTCATGGTCTTCTTCAAGAAAGTTAAATGAAACACCTTTTGCTCCATTGATGCCTACGCCTACTCAAGGACTTGCTCCCCAAACTTCTGATTGGAATGGATATCAGGCACCTGCCTACTTATCAGAGAGGATCATGCATCCATCTTCTACTTATGTCATGAACAACCCAACTATTGAAACAAATGTTTACATGCACCATCAAAAGCAGATGCCGTTTGAAGTGTTTCCAGAAAGGCCTGGTGAACCTGAATGCAGTTTCTTCATTAAAACTGGGGATTGCAAGTTCAAATCTAATTGTAAATTTCACCATCCAAAGAATCGGGTTGCAAAGTTGCCTCCTTGCAACCTTAGTGACAAGGGCCTGCCTTTGAGACCTGACCAGAGTGTCTGCTCACACTATAGTCGTTATGGAATTTGCAAATTTGGGCCAGCTTGTAGATTTGACCACCCAGAAAGCGCACTTCCCCTAATGATGCCTGGACTCGGACAACAATCCTATGCAAACTCAGCTAATGCTCAGGTGGCTGGGATGGGTGGAAGTGCAAGTGATGCAACAATTCAACAATCTGTCTAA
Protein sequence

>Msa1330230

MEHSEETDLAATLSNAEEPQLGSEVKQSSSPVDHHSPPSDLNQTVQKNDDELAVELHEKLDLKVEDEGVVETDDKVSNFNDGGVVSDERGAEIDDKVSNFNDGERVGDERGAETDDKVLNFDDGERVGDEESLKGEKEDEEGSVVGENEEPIKGENEEFVKGEERVDVDGDSKGWDTNSWNENVNEELGGGRDADDWGYGGGDGGGAGYGYGAGYGDGYGDGYGYGDEKEEKSSDGTHQFPLRPEAEDCSFYMKTGSCKFGFNCKFNHPIRRKNQNQAVREKVREREEPEENAGQTECKYYQRSGGCKFGKACKYNHSRGFTAPISELNFLGLPIRLGERECPYYMRTGSCKFGSNCRFNHPDPTTVGGSDQSGYGNGGSVSLRGVSQQPVASWSSSRKLNETPFAPLMPTPTQGLAPQTSDWNGYQAPAYLSERIMHPSSTYVMNNPTIETNVYMHHQKQMPFEVFPERPGEPECSFFIKTGDCKFKSNCKFHHPKNRVAKLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACRFDHPESALPLMMPGLGQQSYANSANAQVAGMGGSASDATIQQSV*