AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1259580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1259580 MtrunA17_Chr4g0059871 92.292 480 27 4 1 477 1 473 0.0 574
Msa1259580 MtrunA17_Chr4g0059861 89.764 127 13 0 1 127 1 127 3.92e-71 235
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1259580 AT5G62640.2 69.748 119 33 2 3 119 2 119 1.93e-48 174
Msa1259580 AT5G62640.1 69.748 119 33 2 3 119 2 119 2.30e-48 174
Msa1259580 AT5G62640.3 55.556 144 31 4 3 119 2 139 6.58e-39 148

Find 242 sgRNAs with CRISPR-Local

Find 513 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTAAAGGGTGAGAATT+AGG 0.114937 8_2:+61279032 Msa1259580:five_prime_UTR
ATTCATTGACACAAATAAAT+TGG 0.185459 8_2:-61278565 None:intergenic
TCGTTGTCGTTCAAAGATTT+TGG 0.199739 8_2:+61284194 Msa1259580:three_prime_UTR
TCATCAATGCTTGGTGCTTT+TGG 0.211601 8_2:-61284085 None:intergenic
TGGTCCTCCTCCAAACTTTC+AGG 0.212678 8_2:+61283338 Msa1259580:CDS
CGATTTACAGCTTGCTCTTT+AGG 0.216103 8_2:-61282131 None:intergenic
TCCACTACGAACATCTTTAA+TGG 0.239665 8_2:+61284347 Msa1259580:three_prime_UTR
TTCTACCCTGCTCATGTAAA+TGG 0.239725 8_2:-61278884 None:intergenic
GGCACCGCAGCAGCGGGATT+TGG 0.249689 8_2:-61282059 None:intergenic
TTTAGGGGTGGAGGAGGAGG+TGG 0.254759 8_2:-61282164 None:intergenic
TCAACAAGGAAACTTCTTAA+AGG 0.256128 8_2:+61279020 Msa1259580:five_prime_UTR
CTGCTTCTACTGTTGTTAAA+AGG 0.257420 8_2:+61283418 Msa1259580:CDS
GATGACGAGCTCACTGATTC+TGG 0.281785 8_2:-61284058 None:intergenic
CTCATACACAGCTTTCTTAG+AGG 0.305527 8_2:+61284108 Msa1259580:CDS
TGTCTTTGGAGCAGTCATTT+GGG 0.311708 8_2:+61281900 Msa1259580:intron
TCGAAAGGAGCTTCGCAAAA+AGG 0.318695 8_2:+61279121 Msa1259580:CDS
TCTGCACTTGTTCTCCTTTG+AGG 0.322456 8_2:-61281927 None:intergenic
TGATCCTCTTCCTGAAAGTT+TGG 0.326618 8_2:-61283348 None:intergenic
GAGATCCAAGAAATGGTTCC+TGG 0.329177 8_2:+61283060 Msa1259580:CDS
ATTGATTACCGGTAATCCTT+TGG 0.332307 8_2:+61284312 Msa1259580:three_prime_UTR
AGTCGTATGCCACCAAATTC+TGG 0.333649 8_2:+61282988 Msa1259580:CDS
GACTGAATAGCACCAGAATT+TGG 0.338105 8_2:-61283000 None:intergenic
TTACCTGTGACTGGACTTCC+TGG 0.341623 8_2:+61283216 Msa1259580:CDS
GGATTTGGAGGCAAGGGAGG+TGG 0.343938 8_2:-61282044 None:intergenic
CAAGAAGCAGATTGAGAACT+TGG 0.347026 8_2:+61279418 Msa1259580:CDS
GGCCTCATATCAGGTGGTGG+TGG 0.348897 8_2:-61283189 None:intergenic
CTGTAGCACAATGTTTGATT+TGG 0.352613 8_2:+61278651 Msa1259580:five_prime_UTR
ATGTCTTTGGAGCAGTCATT+TGG 0.352853 8_2:+61281899 Msa1259580:intron
GGCCCAGGTGGAGGACCATA+TGG 0.355526 8_2:-61283285 None:intergenic
AGGGGTGGAGGAGGAGGTGG+GGG 0.356760 8_2:-61282161 None:intergenic
GCCTCATATCAGGTGGTGGT+GGG 0.358703 8_2:-61283188 None:intergenic
TTTGGAGGCAAGGGAGGTGG+GGG 0.363581 8_2:-61282041 None:intergenic
ATCTGCTTCTTGAGTTGATC+AGG 0.363974 8_2:-61279407 None:intergenic
TTGATTACCGGTAATCCTTT+GGG 0.365179 8_2:+61284313 Msa1259580:three_prime_UTR
GAGGCCCAGGAACCATTTCT+TGG 0.374733 8_2:-61283065 None:intergenic
GGTGGTGGCGGCAAAGGAGG+TGG 0.375758 8_2:-61282095 None:intergenic
TTCTTAAAGGGTGAGAATTA+GGG 0.377175 8_2:+61279033 Msa1259580:five_prime_UTR
TTAGGGGTGGAGGAGGAGGT+GGG 0.378395 8_2:-61282163 None:intergenic
TCCTTGGAAGATAGATTATC+TGG 0.379238 8_2:-61282248 None:intergenic
TAGGGGTGGAGGAGGAGGTG+GGG 0.383987 8_2:-61282162 None:intergenic
CTCATATCAGGTGGTGGTGG+GGG 0.384957 8_2:-61283186 None:intergenic
ACTGTTGACACAGGTGGTTT+TGG 0.390044 8_2:-61283980 None:intergenic
GTTCATCACCTTACCGCCTT+TGG 0.391843 8_2:-61279084 None:intergenic
AATACATCAGGCTGTAAACT+TGG 0.391873 8_2:-61283135 None:intergenic
GGTAATGGAGGCCTCATATC+AGG 0.395163 8_2:-61283198 None:intergenic
AGAAAGAAGGTGAGGGATGT+GGG 0.397715 8_2:+61279368 Msa1259580:CDS
CCAGGAGGTGGTGGCGGCAA+AGG 0.398079 8_2:-61282101 None:intergenic
GGTTGTTGTCTTGGAGGAGG+AGG 0.398352 8_2:-61283087 None:intergenic
CCTGGTCAGGCACCTCCTCC+TGG 0.399606 8_2:+61283234 Msa1259580:CDS
GAACCATTTCTTGGATCTCC+TGG 0.400108 8_2:-61283056 None:intergenic
ATTTGGAGGCAAGGGAGGTG+GGG 0.400168 8_2:-61282042 None:intergenic
AAGAAAGAAGGTGAGGGATG+TGG 0.403157 8_2:+61279367 Msa1259580:CDS
TCTGGAGTGTGCTGAGCTAA+TGG 0.405498 8_2:-61283441 None:intergenic
GGACAAGGAGGTTGTTGTCT+TGG 0.405852 8_2:-61283096 None:intergenic
TGATTAGCTAAATTGATTAC+CGG 0.407341 8_2:+61284301 Msa1259580:three_prime_UTR
GCTGAACTAGCATCAGGAAT+TGG 0.407932 8_2:-61281981 None:intergenic
AAATCCCTTGGCGCACTTGA+TGG 0.410707 8_2:+61284136 Msa1259580:CDS
GCAGCAGATTTAACATATGA+TGG 0.412978 8_2:-61283399 None:intergenic
AAATATAGAGATAAATAAAC+GGG 0.414162 8_2:-61278948 None:intergenic
CTTGGTGGAGGAGGCGGCGG+AGG 0.416574 8_2:-61282967 None:intergenic
CACTCCAGAACTCACATCTA+TGG 0.418941 8_2:+61283455 Msa1259580:CDS
CTTACCATAGATGTGAGTTC+TGG 0.420790 8_2:-61283459 None:intergenic
CTCATCATTGGAGGAGGCCC+AGG 0.423053 8_2:-61283300 None:intergenic
GAATAATTAAGATTGCAAAA+AGG 0.423214 8_2:-61278302 None:intergenic
GCATCAGGAATTGGTGGTGG+TGG 0.425212 8_2:-61281972 None:intergenic
CAAATCAAACATTGTGCTAC+AGG 0.425443 8_2:-61278650 None:intergenic
TGTTGTCTTGGAGGAGGAGG+AGG 0.426012 8_2:-61283084 None:intergenic
TCAAATGCCCAAAGGATTAC+CGG 0.426082 8_2:-61284320 None:intergenic
CAAATATAGAGATAAATAAA+CGG 0.426785 8_2:-61278949 None:intergenic
CAATCTTTAATTTGTGTTGG+AGG 0.430232 8_2:+61278601 Msa1259580:five_prime_UTR
CTAAAGAGCAAGCTGTAAAT+CGG 0.431062 8_2:+61282132 Msa1259580:CDS
CTGCATCTGTGCGGGTGAGA+AGG 0.432711 8_2:+61283933 Msa1259580:CDS
CCCCACCACCACCTGATATG+AGG 0.436179 8_2:+61283187 Msa1259580:CDS
CAACAAGGAAACTTCTTAAA+GGG 0.437473 8_2:+61279021 Msa1259580:five_prime_UTR
GGAAGTCCAGTCACAGGTAA+TGG 0.439531 8_2:-61283213 None:intergenic
CTTTCAGGAAGAGGATCATA+TGG 0.439842 8_2:+61283353 Msa1259580:CDS
AAGAAGACAATGAAGAAAGA+AGG 0.442273 8_2:-61278239 None:intergenic
GCCCAGGTGGAGGACCATAT+GGG 0.444020 8_2:-61283284 None:intergenic
AATCGTGAAACATGTGTCAA+TGG 0.447873 8_2:+61284273 Msa1259580:three_prime_UTR
CCTTCACTGGTGCCAGGTGG+AGG 0.449595 8_2:-61282200 None:intergenic
GGAAGTGGTGGTCTCATCAT+TGG 0.450117 8_2:-61283312 None:intergenic
GGAGGACCAGGAGGTGGTGG+CGG 0.453518 8_2:-61282107 None:intergenic
ATCTTCCAAGGAGCCTGGTC+AGG 0.453723 8_2:+61282259 Msa1259580:CDS
GTTCACACATTTGAGAAGGC+TGG 0.454985 8_2:-61278846 None:intergenic
TTACAATCTTTAATTTGTGT+TGG 0.456839 8_2:+61278598 Msa1259580:five_prime_UTR
ACCGCAGCAGCGGGATTTGG+AGG 0.457590 8_2:-61282056 None:intergenic
CAGCCGGATGTTTAATTCCT+CGG 0.457659 8_2:+61278779 Msa1259580:five_prime_UTR
GGCACCTCCTCCTGGAATGA+TGG 0.457937 8_2:+61283242 Msa1259580:CDS
AAAAGAACTATGATAATTGA+AGG 0.459219 8_2:-61278440 None:intergenic
CCTTTGCCGCCACCACCTCC+TGG 0.462646 8_2:+61282101 Msa1259580:CDS
CCTCATATCAGGTGGTGGTG+GGG 0.464945 8_2:-61283187 None:intergenic
GGCATACGACTTGGTGGAGG+AGG 0.466835 8_2:-61282976 None:intergenic
TCAGGAATTGGTGGTGGTGG+GGG 0.466923 8_2:-61281969 None:intergenic
GCCTACCTGACCAGGCTCCT+TGG 0.466933 8_2:-61282264 None:intergenic
GGTGGAGGACCAGGAGGTGG+TGG 0.469883 8_2:-61282110 None:intergenic
GGAGGCAGTGGCAAAGATGC+AGG 0.471761 8_2:-61282020 None:intergenic
TTAGGTGGAGGACCAGGAGG+TGG 0.473869 8_2:-61282113 None:intergenic
GATTTGGAGGCAAGGGAGGT+GGG 0.474522 8_2:-61282043 None:intergenic
TGCTCTTTAGGTGGAGGACC+AGG 0.474543 8_2:-61282119 None:intergenic
CTTCTCACCCGCACAGATGC+AGG 0.476908 8_2:-61283932 None:intergenic
CTAGGTTCCTGCATCTGTGC+GGG 0.477960 8_2:+61283925 Msa1259580:intron
CAGTCTCAGCCGCCTCCACC+TGG 0.478625 8_2:+61282188 Msa1259580:CDS
TCTTTAATTTGTGTTGGAGG+TGG 0.480753 8_2:+61278604 Msa1259580:five_prime_UTR
CGACTTGGTGGAGGAGGCGG+CGG 0.481431 8_2:-61282970 None:intergenic
TCCTCCAAACTTTCAGGAAG+AGG 0.483764 8_2:+61283344 Msa1259580:CDS
GGAGGTGGTGGTAATGATAC+AGG 0.484282 8_2:-61282080 None:intergenic
GCCTCCAAATCCCGCTGCTG+CGG 0.484438 8_2:+61282055 Msa1259580:CDS
TATGATGGTTTCTGAGGAAG+TGG 0.485438 8_2:-61283384 None:intergenic
CATCAGGAATTGGTGGTGGT+GGG 0.485484 8_2:-61281971 None:intergenic
CTTTAATGGATGAACTAAAG+TGG 0.488401 8_2:+61284361 Msa1259580:three_prime_UTR
CAAGGAGGTTGTTGTCTTGG+AGG 0.489583 8_2:-61283093 None:intergenic
TGAAAGTTTGGAGGAGGACC+AGG 0.490881 8_2:-61283336 None:intergenic
TCCTCTTCCTGAAAGTTTGG+AGG 0.490909 8_2:-61283345 None:intergenic
GGAGGAGGACCAGGTGGAAG+TGG 0.492353 8_2:-61283327 None:intergenic
ATACGACTTGGTGGAGGAGG+CGG 0.492519 8_2:-61282973 None:intergenic
AAACCAGGAGATCCAAGAAA+TGG 0.493307 8_2:+61283053 Msa1259580:CDS
TTAGAGGACATGAAATCCCT+TGG 0.494691 8_2:+61284124 Msa1259580:CDS
CCTCGGTAGTTAACTGCAGC+CGG 0.497284 8_2:+61278763 Msa1259580:five_prime_UTR
ATAGTTGGCCCGAGTGTCAC+AGG 0.497969 8_2:-61284028 None:intergenic
ATCAGGAATTGGTGGTGGTG+GGG 0.498401 8_2:-61281970 None:intergenic
TGACACAAGTTAATTGCTGA+TGG 0.501330 8_2:-61278511 None:intergenic
CTTGGAGGAGGAGGAGGCCC+AGG 0.501418 8_2:-61283078 None:intergenic
GGAGGTGGTGGCGGCAAAGG+AGG 0.502570 8_2:-61282098 None:intergenic
CCAGGAGGAGGTGCCTGACC+AGG 0.503405 8_2:-61283234 None:intergenic
ATCGTGAAACATGTGTCAAT+GGG 0.504790 8_2:+61284274 Msa1259580:three_prime_UTR
TTCACACATTTGAGAAGGCT+GGG 0.505070 8_2:-61278845 None:intergenic
CCCCATATGGTCCTCCACCT+GGG 0.506318 8_2:+61283283 Msa1259580:CDS
ATTGGAGGAGGCCCAGGTGG+AGG 0.506698 8_2:-61283294 None:intergenic
TGTGACTGGACTTCCTGGTC+AGG 0.512104 8_2:+61283221 Msa1259580:CDS
TGATGAGAAAAGGCGGGAGA+AGG 0.516031 8_2:+61281789 Msa1259580:CDS
GGTGGCGGCAAAGGAGGTGG+TGG 0.516548 8_2:-61282092 None:intergenic
GAATTTGGTGGCATACGACT+TGG 0.516978 8_2:-61282985 None:intergenic
GGTGGGAATCGAGATATTCC+AGG 0.517549 8_2:-61283162 None:intergenic
GATACAGGCACCGCAGCAGC+GGG 0.519764 8_2:-61282065 None:intergenic
AGGCCTCCATTACCTGTGAC+TGG 0.519780 8_2:+61283207 Msa1259580:CDS
CTTGGGATTAATGAGGGTCC+TGG 0.520058 8_2:-61283117 None:intergenic
ACAGCTTGCTCTTTAGGTGG+AGG 0.520491 8_2:-61282125 None:intergenic
TGCATCTGTGCGGGTGAGAA+GGG 0.520543 8_2:+61283934 Msa1259580:CDS
GACAGGAACATGATGAGAAA+AGG 0.521466 8_2:+61281779 Msa1259580:intron
CCTCCACCTGGCACCAGTGA+AGG 0.527423 8_2:+61282200 Msa1259580:CDS
CCCAGGTGGAGGACCATATG+GGG 0.528745 8_2:-61283283 None:intergenic
TGCTGTTCACACATTTGAGA+AGG 0.528843 8_2:-61278850 None:intergenic
TCACTGGTGCCAGGTGGAGG+CGG 0.529110 8_2:-61282197 None:intergenic
TCCTCGGCATTTAACTGCCG+AGG 0.530280 8_2:+61278795 Msa1259580:five_prime_UTR
GATGAGAAAAGGCGGGAGAA+GGG 0.530329 8_2:+61281790 Msa1259580:CDS
AGAAGACAATGAAGAAAGAA+GGG 0.532888 8_2:-61278238 None:intergenic
ATGCCGAGGAATTAAACATC+CGG 0.536156 8_2:-61278782 None:intergenic
GTCATTTGGGGCTTCCTCAA+AGG 0.539043 8_2:+61281913 Msa1259580:intron
TTTACAGCTTGCTCTTTAGG+TGG 0.539205 8_2:-61282128 None:intergenic
AATCTATCTTCCAAGGAGCC+TGG 0.539750 8_2:+61282254 Msa1259580:CDS
CCATCAGCTGAACTAGCATC+AGG 0.540810 8_2:-61281987 None:intergenic
TTTGTTGTGGCAGAGGCTGA+TGG 0.541664 8_2:+61280337 Msa1259580:intron
AGCAGCGGGATTTGGAGGCA+AGG 0.541849 8_2:-61282051 None:intergenic
ATTAATGAGGGTCCTGGACA+AGG 0.542446 8_2:-61283111 None:intergenic
GTCTTTGGAGCAGTCATTTG+GGG 0.545250 8_2:+61281901 Msa1259580:intron
TCTGGTGCTATTCAGTCTGA+TGG 0.547671 8_2:+61283006 Msa1259580:CDS
GGAGGACCAGGTGGAAGTGG+TGG 0.548278 8_2:-61283324 None:intergenic
TTTGGTGGCATACGACTTGG+TGG 0.551552 8_2:-61282982 None:intergenic
TCTTCCTGAAAGTTTGGAGG+AGG 0.551854 8_2:-61283342 None:intergenic
GGAGGTTGTTGTCTTGGAGG+AGG 0.552576 8_2:-61283090 None:intergenic
AGAACAGTCCCTGTGACACT+CGG 0.554265 8_2:+61284019 Msa1259580:CDS
TTTAATGGATGAACTAAAGT+GGG 0.555675 8_2:+61284362 Msa1259580:three_prime_UTR
CTGTAAACTTGGGATTAATG+AGG 0.555892 8_2:-61283124 None:intergenic
TATGAGAAAGTTATCAGCAC+AGG 0.559176 8_2:-61278391 None:intergenic
ATCTATCCACAAGGTTTCTG+TGG 0.559383 8_2:-61284250 None:intergenic
TTAACATATGATGGTTTCTG+AGG 0.559870 8_2:-61283390 None:intergenic
TTTGTGGGGTCAAATTGTCA+TGG 0.560619 8_2:+61284400 Msa1259580:three_prime_UTR
GCGGGATTTGGAGGCAAGGG+AGG 0.560930 8_2:-61282047 None:intergenic
GGGACCATCATTCCAGGAGG+AGG 0.562381 8_2:-61283246 None:intergenic
GAACTAGCATCAGGAATTGG+TGG 0.562902 8_2:-61281978 None:intergenic
AGACAACAACCTCCTTGTCC+AGG 0.563064 8_2:+61283099 Msa1259580:CDS
TTTAAGAGATTAGCAAAATG+GGG 0.565009 8_2:+61284226 Msa1259580:three_prime_UTR
TCCATTAAAGATGTTCGTAG+TGG 0.565775 8_2:-61284348 None:intergenic
ATGAAGGAAATAAAAGGGTG+TGG 0.567939 8_2:-61278472 None:intergenic
TCCTTTCGATAAGCATCGGT+AGG 0.569880 8_2:-61279107 None:intergenic
GCAGCGGGATTTGGAGGCAA+GGG 0.573293 8_2:-61282050 None:intergenic
TGATACAGGCACCGCAGCAG+CGG 0.575550 8_2:-61282066 None:intergenic
GCCAGATAATCTATCTTCCA+AGG 0.576178 8_2:+61282247 Msa1259580:CDS
AGATCCAAGAAATGGTTCCT+GGG 0.576940 8_2:+61283061 Msa1259580:CDS
CCTCGGCATTTAACTGCCGA+GGG 0.578272 8_2:+61278796 Msa1259580:five_prime_UTR
GGCAGAGGCTGATGGTGCAT+TGG 0.578834 8_2:+61280345 Msa1259580:intron
GACACAAGTTAATTGCTGAT+GGG 0.580363 8_2:-61278510 None:intergenic
TCAACCATCAAGTGCGCCAA+GGG 0.581937 8_2:-61284140 None:intergenic
CCCTACCGATGCTTATCGAA+AGG 0.583184 8_2:+61279106 Msa1259580:CDS
CTCAACCATCAAGTGCGCCA+AGG 0.583558 8_2:-61284141 None:intergenic
GAAGACGACCAAAGGCGGTA+AGG 0.583594 8_2:+61279076 Msa1259580:CDS
ATACATCAGGCTGTAAACTT+GGG 0.584941 8_2:-61283134 None:intergenic
GGTGGCATACGACTTGGTGG+AGG 0.584968 8_2:-61282979 None:intergenic
AAAAGAAAGAAAGAAGGTGA+GGG 0.585531 8_2:+61279361 Msa1259580:CDS
GGTGGTCTCATCATTGGAGG+AGG 0.586166 8_2:-61283306 None:intergenic
GAAAGAAGGTGAGGGATGTG+GGG 0.589038 8_2:+61279369 Msa1259580:CDS
AGTGGTGGTCTCATCATTGG+AGG 0.590662 8_2:-61283309 None:intergenic
ATCATTGGAGGAGGCCCAGG+TGG 0.592389 8_2:-61283297 None:intergenic
GGAACATGATGAGAAAAGGC+GGG 0.595501 8_2:+61281783 Msa1259580:intron
CCTGATGCTAGTTCAGCTGA+TGG 0.597047 8_2:+61281987 Msa1259580:CDS
GGAGGCCTCATATCAGGTGG+TGG 0.598817 8_2:-61283192 None:intergenic
TGTAAACTTGGGATTAATGA+GGG 0.605133 8_2:-61283123 None:intergenic
CCTTTCGATAAGCATCGGTA+GGG 0.605420 8_2:-61279106 None:intergenic
GAACAGTCCCTGTGACACTC+GGG 0.605709 8_2:+61284020 Msa1259580:CDS
CCCTCGGCAGTTAAATGCCG+AGG 0.606760 8_2:-61278796 None:intergenic
ATGAGACCACCACTTCCACC+TGG 0.606838 8_2:+61283318 Msa1259580:CDS
TGACCAGGAAGTCCAGTCAC+AGG 0.609340 8_2:-61283219 None:intergenic
ACTAGGTTCCTGCATCTGTG+CGG 0.610057 8_2:+61283924 Msa1259580:intron
TCAATGACGAAGACGACCAA+AGG 0.615621 8_2:+61279068 Msa1259580:exon
TTAAGAGATTAGCAAAATGG+GGG 0.617687 8_2:+61284227 Msa1259580:three_prime_UTR
TCTTGTCATTAAGAAGCAGA+AGG 0.618323 8_2:+61280414 Msa1259580:CDS
TTCACGATTATCTATCCACA+AGG 0.621106 8_2:-61284259 None:intergenic
GTTGAGATCACTGTGAGTGG+TGG 0.623794 8_2:+61284158 Msa1259580:exon
TCTTTAGGTGGAGGACCAGG+AGG 0.623946 8_2:-61282116 None:intergenic
ATGACGAAGACGACCAAAGG+CGG 0.624279 8_2:+61279071 Msa1259580:CDS
TGAATAGCACCAGAATTTGG+TGG 0.624865 8_2:-61282997 None:intergenic
AGGAACATGATGAGAAAAGG+CGG 0.626419 8_2:+61281782 Msa1259580:intron
TAAGAACTCTTATGCAAACC+AGG 0.627646 8_2:+61283038 Msa1259580:CDS
AAGCTCCTTTCGATAAGCAT+CGG 0.633489 8_2:-61279111 None:intergenic
AAGATGAAAAGTGAAGTTTG+TGG 0.634445 8_2:+61278677 Msa1259580:five_prime_UTR
GTGGGGTCAAATTGTCATGG+AGG 0.634836 8_2:+61284403 Msa1259580:three_prime_UTR
TCGCCTTCACTGGTGCCAGG+TGG 0.636753 8_2:-61282203 None:intergenic
TCGGCATTTAACTGCCGAGG+GGG 0.638543 8_2:+61278798 Msa1259580:five_prime_UTR
GTGTATGAGTCATCAATGCT+TGG 0.640196 8_2:-61284094 None:intergenic
CCAGGTGGAGGACCATATGG+GGG 0.641485 8_2:-61283282 None:intergenic
AGTCCAGTCACAGGTAATGG+AGG 0.651630 8_2:-61283210 None:intergenic
CTAGCATCAGGAATTGGTGG+TGG 0.655367 8_2:-61281975 None:intergenic
ATGGTTGAGATCACTGTGAG+TGG 0.655860 8_2:+61284155 Msa1259580:exon
GTGGGAATCGAGATATTCCA+GGG 0.662179 8_2:-61283161 None:intergenic
TGGATTGATCAAATGCCCAA+AGG 0.662369 8_2:-61284328 None:intergenic
GACACTGACACTGTTGACAC+AGG 0.662733 8_2:-61283989 None:intergenic
AAGTTTGGAGGAGGACCAGG+TGG 0.669156 8_2:-61283333 None:intergenic
TATAGAGATAAATAAACGGG+GGG 0.672765 8_2:-61278945 None:intergenic
TAGTTGGCCCGAGTGTCACA+GGG 0.676300 8_2:-61284027 None:intergenic
TTTGAACGACAACGACTGAG+AGG 0.679544 8_2:-61284186 None:intergenic
ATATAGAGATAAATAAACGG+GGG 0.680562 8_2:-61278946 None:intergenic
AATGGAGGCCTCATATCAGG+TGG 0.683051 8_2:-61283195 None:intergenic
AATGAGGGTCCTGGACAAGG+AGG 0.685690 8_2:-61283108 None:intergenic
TTTCACCTGAACATAACAGG+GGG 0.688198 8_2:-61281817 None:intergenic
ACTGACACTGTTGACACAGG+TGG 0.689341 8_2:-61283986 None:intergenic
CTCGGCATTTAACTGCCGAG+GGG 0.700873 8_2:+61278797 Msa1259580:five_prime_UTR
AGAGGAACAGTAAATCAACA+AGG 0.704831 8_2:+61279006 Msa1259580:five_prime_UTR
CCGGCTGCAGTTAACTACCG+AGG 0.715389 8_2:-61278763 None:intergenic
ATCAGCACAGGAAATCAGAG+TGG 0.720936 8_2:-61278379 None:intergenic
AATATAGAGATAAATAAACG+GGG 0.729420 8_2:-61278947 None:intergenic
TGGGAATCGAGATATTCCAG+GGG 0.767776 8_2:-61283160 None:intergenic
GGGAATCGAGATATTCCAGG+GGG 0.784831 8_2:-61283159 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATATTTTTATTTAGCAA+AGG + chr8_2:61281663-61281682 Msa1259580:intron 10.0%
!! AAAAAGTTCAGAAAAATAAT+GGG - chr8_2:61278417-61278436 None:intergenic 15.0%
!! TAAAAAGTTCAGAAAAATAA+TGG - chr8_2:61278418-61278437 None:intergenic 15.0%
!! AAATATAGAGATAAATAAAC+GGG - chr8_2:61278951-61278970 None:intergenic 15.0%
!! CAAATATAGAGATAAATAAA+CGG - chr8_2:61278952-61278971 None:intergenic 15.0%
!! TTTATATGTCATAAACATTA+AGG - chr8_2:61280818-61280837 None:intergenic 15.0%
!! TTCAATATATCTATAATTTC+AGG - chr8_2:61282358-61282377 None:intergenic 15.0%
!! ATAAAAAATATAAAACACGT+GGG - chr8_2:61284498-61284517 None:intergenic 15.0%
!! AATAAAAAATATAAAACACG+TGG - chr8_2:61284499-61284518 None:intergenic 15.0%
!! GAATAATTAAGATTGCAAAA+AGG - chr8_2:61278305-61278324 None:intergenic 20.0%
!! AAAAGAACTATGATAATTGA+AGG - chr8_2:61278443-61278462 None:intergenic 20.0%
!! GAAAAATGAAGGAAATAAAA+GGG - chr8_2:61278480-61278499 None:intergenic 20.0%
!! AGAAAAATGAAGGAAATAAA+AGG - chr8_2:61278481-61278500 None:intergenic 20.0%
!! ATTCATTGACACAAATAAAT+TGG - chr8_2:61278568-61278587 None:intergenic 20.0%
!!! TTACAATCTTTAATTTGTGT+TGG + chr8_2:61278598-61278617 Msa1259580:five_prime_UTR 20.0%
!! AACAAAAAAAACAATTGAAG+TGG + chr8_2:61278715-61278734 Msa1259580:five_prime_UTR 20.0%
!! AATATAGAGATAAATAAACG+GGG - chr8_2:61278950-61278969 None:intergenic 20.0%
!! TGAATTTCAATTATGCTAAT+AGG + chr8_2:61279221-61279240 Msa1259580:intron 20.0%
!! GAATTTCAATTATGCTAATA+GGG + chr8_2:61279222-61279241 Msa1259580:intron 20.0%
!! GAATAAAAAAGAAAGAAAGA+AGG + chr8_2:61279355-61279374 Msa1259580:intron 20.0%
!! AACTGATAATATGAAGTAAA+AGG - chr8_2:61279644-61279663 None:intergenic 20.0%
!! AATATACTATACACTACAAT+TGG + chr8_2:61280093-61280112 Msa1259580:intron 20.0%
!! AAAAATCTGCAAAATTATGT+AGG - chr8_2:61280484-61280503 None:intergenic 20.0%
!!! TGTTACGATACATTTTTTTT+TGG + chr8_2:61280755-61280774 Msa1259580:intron 20.0%
!! TATTGAAACAAACTTGTAAT+GGG + chr8_2:61281480-61281499 Msa1259580:intron 20.0%
!!! TCATTTTTAGTTAAATGACT+TGG + chr8_2:61282287-61282306 Msa1259580:intron 20.0%
!!! CATTTTTAGTTAAATGACTT+GGG + chr8_2:61282288-61282307 Msa1259580:intron 20.0%
!! ATAGAACATTTAAATGTCTT+TGG - chr8_2:61282582-61282601 None:intergenic 20.0%
!! AGACATTTAAATGTTCTATT+AGG + chr8_2:61282583-61282602 Msa1259580:intron 20.0%
!! TGTTTAAAAACACTGAAAAT+TGG - chr8_2:61282659-61282678 None:intergenic 20.0%
!! AACATTTCAAATTATGTTCA+AGG + chr8_2:61282675-61282694 Msa1259580:intron 20.0%
!! ATACTTAACAAAAGTTTCTT+CGG + chr8_2:61282906-61282925 Msa1259580:intron 20.0%
!! ACTAAATGTGTACTTAATAT+AGG - chr8_2:61283557-61283576 None:intergenic 20.0%
!! TTTGCTAATCTCTTAAAAAA+AGG - chr8_2:61284223-61284242 None:intergenic 20.0%
!!! TTTTTAAGAGATTAGCAAAA+TGG + chr8_2:61284224-61284243 Msa1259580:three_prime_UTR 20.0%
!!! TTTTAAGAGATTAGCAAAAT+GGG + chr8_2:61284225-61284244 Msa1259580:three_prime_UTR 20.0%
!!! TAAACCAAGTTATTTTTTGT+GGG + chr8_2:61284385-61284404 Msa1259580:three_prime_UTR 20.0%
!!! TATTTCCTTCATTTTTCTGA+TGG + chr8_2:61278483-61278502 Msa1259580:five_prime_UTR 25.0%
! ATATAGAGATAAATAAACGG+GGG - chr8_2:61278949-61278968 None:intergenic 25.0%
!! AAACAATCAAATTTTCGAAG+AGG + chr8_2:61278988-61279007 Msa1259580:five_prime_UTR 25.0%
!!! ACATTTTTGCTTTGTTGTTT+TGG + chr8_2:61279326-61279345 Msa1259580:intron 25.0%
!!! TAACTAGCTTTTGCATTTTA+AGG + chr8_2:61279476-61279495 Msa1259580:intron 25.0%
!! TGGTGATGTAAAAAAAAACA+AGG - chr8_2:61279516-61279535 None:intergenic 25.0%
! GTAAAAGGTTGCAAAATAAA+TGG - chr8_2:61279629-61279648 None:intergenic 25.0%
! TCAGATTAAATTAGAAGACT+AGG + chr8_2:61279665-61279684 Msa1259580:intron 25.0%
!!! GATTTACAATCCTCTAAAAT+TGG - chr8_2:61279997-61280016 None:intergenic 25.0%
!! TTTTATTCCAAAATGTGGTA+TGG + chr8_2:61280192-61280211 Msa1259580:intron 25.0%
!! TTCATACATGTCTATTTTGT+TGG + chr8_2:61280443-61280462 Msa1259580:intron 25.0%
!! TCATACATGTCTATTTTGTT+GGG + chr8_2:61280444-61280463 Msa1259580:intron 25.0%
! CTCTAAGTAATACTTATCTA+TGG - chr8_2:61280907-61280926 None:intergenic 25.0%
! TTATCAGTGATGTTAAATAG+TGG + chr8_2:61280973-61280992 Msa1259580:intron 25.0%
!!! TAGTGTTGTTGATATTTTCT+TGG + chr8_2:61281407-61281426 Msa1259580:intron 25.0%
! CTATTGAAACAAACTTGTAA+TGG + chr8_2:61281479-61281498 Msa1259580:intron 25.0%
! ACATTTAAGTCTTGATTGAT+TGG + chr8_2:61281550-61281569 Msa1259580:intron 25.0%
!! AAGGAAAAACCAGAATTTTA+TGG + chr8_2:61281576-61281595 Msa1259580:intron 25.0%
! ACTCTAATTCCATAAAATTC+TGG - chr8_2:61281588-61281607 None:intergenic 25.0%
! AAAATATAAATGCACAACAC+AGG - chr8_2:61281653-61281672 None:intergenic 25.0%
! TATCAGATTTAGATCATCAA+TGG - chr8_2:61281752-61281771 None:intergenic 25.0%
!! GATCTAAATCTGATATCTTT+TGG + chr8_2:61281757-61281776 Msa1259580:intron 25.0%
! TAAACAACACAAAAACAAAC+TGG - chr8_2:61281868-61281887 None:intergenic 25.0%
!! TTGTCTATTTCTTTATGTGT+TGG + chr8_2:61282621-61282640 Msa1259580:intron 25.0%
! TGTGTACTTAATATAGGTAT+GGG - chr8_2:61283551-61283570 None:intergenic 25.0%
! ATGTGTACTTAATATAGGTA+TGG - chr8_2:61283552-61283571 None:intergenic 25.0%
! TATTTAACTGAGACATTACT+CGG - chr8_2:61283791-61283810 None:intergenic 25.0%
! TAATTGCTCTAATATAGTCT+GGG + chr8_2:61283890-61283909 Msa1259580:intron 25.0%
! TTTAAGAGATTAGCAAAATG+GGG + chr8_2:61284226-61284245 Msa1259580:three_prime_UTR 25.0%
!! TGATTAGCTAAATTGATTAC+CGG + chr8_2:61284301-61284320 Msa1259580:three_prime_UTR 25.0%
!! TTTAATGGATGAACTAAAGT+GGG + chr8_2:61284362-61284381 Msa1259580:three_prime_UTR 25.0%
!!! GTAAACCAAGTTATTTTTTG+TGG + chr8_2:61284384-61284403 Msa1259580:three_prime_UTR 25.0%
!!! AAACCAAGTTATTTTTTGTG+GGG + chr8_2:61284386-61284405 Msa1259580:three_prime_UTR 25.0%
AAGATTGCAAAAAGGAAAAG+TGG - chr8_2:61278297-61278316 None:intergenic 30.0%
!! CAATCTTTAATTTGTGTTGG+AGG + chr8_2:61278601-61278620 Msa1259580:five_prime_UTR 30.0%
AAGATGAAAAGTGAAGTTTG+TGG + chr8_2:61278677-61278696 Msa1259580:five_prime_UTR 30.0%
! ATTTTCCATTTACATGAGCA+GGG + chr8_2:61278879-61278898 Msa1259580:five_prime_UTR 30.0%
TATAGAGATAAATAAACGGG+GGG - chr8_2:61278948-61278967 None:intergenic 30.0%
TCAACAAGGAAACTTCTTAA+AGG + chr8_2:61279020-61279039 Msa1259580:five_prime_UTR 30.0%
CAACAAGGAAACTTCTTAAA+GGG + chr8_2:61279021-61279040 Msa1259580:five_prime_UTR 30.0%
TTCTTAAAGGGTGAGAATTA+GGG + chr8_2:61279033-61279052 Msa1259580:five_prime_UTR 30.0%
TTCGCAAAAAGGAATTGAAA+AGG + chr8_2:61279132-61279151 Msa1259580:CDS 30.0%
TCGCAAAAAGGAATTGAAAA+GGG + chr8_2:61279133-61279152 Msa1259580:CDS 30.0%
TCAGTGATTAAGTCAGTATT+TGG - chr8_2:61279288-61279307 None:intergenic 30.0%
AAAAAGAAAGAAAGAAGGTG+AGG + chr8_2:61279360-61279379 Msa1259580:CDS 30.0%
AAAAGAAAGAAAGAAGGTGA+GGG + chr8_2:61279361-61279380 Msa1259580:CDS 30.0%
CCATTATTCTCTAAACAAGA+TGG - chr8_2:61279560-61279579 None:intergenic 30.0%
! CCATCTTGTTTAGAGAATAA+TGG + chr8_2:61279557-61279576 Msa1259580:intron 30.0%
! AAAACTAATTTGCAAACAGC+AGG + chr8_2:61279934-61279953 Msa1259580:intron 30.0%
TCAAATATAGAACTGCCTAT+AGG + chr8_2:61279971-61279990 Msa1259580:intron 30.0%
TATACACTACAATTGGAGAT+GGG + chr8_2:61280100-61280119 Msa1259580:intron 30.0%
TTGGAATAAAAGTGGAATAC+TGG - chr8_2:61280183-61280202 None:intergenic 30.0%
!! TCCACTTTTATTCCAAAATG+TGG + chr8_2:61280187-61280206 Msa1259580:intron 30.0%
!!! ACCACATTTTGGAATAAAAG+TGG - chr8_2:61280191-61280210 None:intergenic 30.0%
TTATGTAGGAGAATACAAAG+TGG - chr8_2:61280470-61280489 None:intergenic 30.0%
GTATATCCTTTACTTCTTCA+GGG - chr8_2:61280691-61280710 None:intergenic 30.0%
AGTATATCCTTTACTTCTTC+AGG - chr8_2:61280692-61280711 None:intergenic 30.0%
TGAAGAAGTAAAGGATATAC+TGG + chr8_2:61280691-61280710 Msa1259580:intron 30.0%
ACTGATAAACTACCAATTAG+AGG - chr8_2:61280961-61280980 None:intergenic 30.0%
TATGGCCAATTTATGAAGAA+AGG + chr8_2:61281034-61281053 Msa1259580:intron 30.0%
!!! GCCTTAAAATGACAGTTTTT+TGG + chr8_2:61281088-61281107 Msa1259580:intron 30.0%
!!! GCCAAAAAACTGTCATTTTA+AGG - chr8_2:61281092-61281111 None:intergenic 30.0%
GCAGTATTATCAATTGCAAA+AGG - chr8_2:61281114-61281133 None:intergenic 30.0%
! TTGCAATTGATAATACTGCT+TGG + chr8_2:61281115-61281134 Msa1259580:intron 30.0%
!! TATATGTTCTCTTGGTAATG+AGG - chr8_2:61281195-61281214 None:intergenic 30.0%
CAGATTATGATAAACCCAAT+AGG - chr8_2:61281380-61281399 None:intergenic 30.0%
GGTTTATCATAATCTGTATG+TGG + chr8_2:61281384-61281403 Msa1259580:intron 30.0%
TGTTCACCAAAAAATTCCAT+GGG - chr8_2:61281533-61281552 None:intergenic 30.0%
ATGTTCACCAAAAAATTCCA+TGG - chr8_2:61281534-61281553 None:intergenic 30.0%
AGTCTTGATTGATTGGTAAA+AGG + chr8_2:61281557-61281576 Msa1259580:intron 30.0%
TCAAATTCAAAGGCTGAATT+TGG - chr8_2:61281692-61281711 None:intergenic 30.0%
! ACTAGAGTGTTCAAATTCAA+AGG - chr8_2:61281702-61281721 None:intergenic 30.0%
! AAATCTGATATCTTTTGGAC+AGG + chr8_2:61281762-61281781 Msa1259580:intron 30.0%
! TTTTTCACCTGAACATAACA+GGG - chr8_2:61281822-61281841 None:intergenic 30.0%
! ATTTTTCACCTGAACATAAC+AGG - chr8_2:61281823-61281842 None:intergenic 30.0%
!! TTGTGTTGTTTACAAATCCT+TGG + chr8_2:61281876-61281895 Msa1259580:intron 30.0%
TCTGACTGTATAAGTATGAA+CGG + chr8_2:61282331-61282350 Msa1259580:intron 30.0%
!!! CGGCATTTTTTTTATCCAAA+AGG + chr8_2:61282403-61282422 Msa1259580:intron 30.0%
! CAAAATTTAGGATGTCAGTA+TGG + chr8_2:61282447-61282466 Msa1259580:intron 30.0%
TATACAAGCAAGAGATAACA+CGG - chr8_2:61282731-61282750 None:intergenic 30.0%
AATGTAATGTGTTCCCATTT+GGG - chr8_2:61282848-61282867 None:intergenic 30.0%
AAATGTAATGTGTTCCCATT+TGG - chr8_2:61282849-61282868 None:intergenic 30.0%
!!! ATTTTTTCTCTCTGAAATGC+AGG + chr8_2:61282936-61282955 Msa1259580:intron 30.0%
TGTAAACTTGGGATTAATGA+GGG - chr8_2:61283126-61283145 None:intergenic 30.0%
TTAACATATGATGGTTTCTG+AGG - chr8_2:61283393-61283412 None:intergenic 30.0%
GTGTACTTAATATAGGTATG+GGG - chr8_2:61283550-61283569 None:intergenic 30.0%
!! GAAAAGTTGGCTTTAATTAG+TGG + chr8_2:61283737-61283756 Msa1259580:intron 30.0%
TGGTCATGAACAAACAATTT+AGG - chr8_2:61283827-61283846 None:intergenic 30.0%
GTAATTGCTCTAATATAGTC+TGG + chr8_2:61283889-61283908 Msa1259580:intron 30.0%
!!! TCTGGGTCATTTTTTTTACT+AGG + chr8_2:61283907-61283926 Msa1259580:intron 30.0%
!!! GATTCTGGTTTTACAATAGT+TGG - chr8_2:61284046-61284065 None:intergenic 30.0%
TTAAGAGATTAGCAAAATGG+GGG + chr8_2:61284227-61284246 Msa1259580:three_prime_UTR 30.0%
! CTTTAATGGATGAACTAAAG+TGG + chr8_2:61284361-61284380 Msa1259580:three_prime_UTR 30.0%
TATGAGAAAGTTATCAGCAC+AGG - chr8_2:61278394-61278413 None:intergenic 35.0%
ATGAAGGAAATAAAAGGGTG+TGG - chr8_2:61278475-61278494 None:intergenic 35.0%
GAGAACCATCAGAAAAATGA+AGG - chr8_2:61278491-61278510 None:intergenic 35.0%
GACACAAGTTAATTGCTGAT+GGG - chr8_2:61278513-61278532 None:intergenic 35.0%
TGACACAAGTTAATTGCTGA+TGG - chr8_2:61278514-61278533 None:intergenic 35.0%
!! TCTTTAATTTGTGTTGGAGG+TGG + chr8_2:61278604-61278623 Msa1259580:five_prime_UTR 35.0%
CAAATCAAACATTGTGCTAC+AGG - chr8_2:61278653-61278672 None:intergenic 35.0%
CTGTAGCACAATGTTTGATT+TGG + chr8_2:61278651-61278670 Msa1259580:five_prime_UTR 35.0%
! CATTTTCCATTTACATGAGC+AGG + chr8_2:61278878-61278897 Msa1259580:five_prime_UTR 35.0%
AGAGGAACAGTAAATCAACA+AGG + chr8_2:61279006-61279025 Msa1259580:five_prime_UTR 35.0%
CTTCTTAAAGGGTGAGAATT+AGG + chr8_2:61279032-61279051 Msa1259580:five_prime_UTR 35.0%
TTATACCAGCATAATGCTGA+TGG - chr8_2:61279536-61279555 None:intergenic 35.0%
ATGTGACACATGTGAATAGT+TGG + chr8_2:61279720-61279739 Msa1259580:intron 35.0%
!! TTGGAAAGATAAGGTATTGC+AGG - chr8_2:61279771-61279790 None:intergenic 35.0%
!! ATAAGCTGGTTTGATGGTTT+GGG - chr8_2:61279810-61279829 None:intergenic 35.0%
CATACATCTAGTAGTTGTCA+TGG + chr8_2:61279878-61279897 Msa1259580:intron 35.0%
!! ATCCTCTAAAATTGGCCTAT+AGG - chr8_2:61279989-61280008 None:intergenic 35.0%
CTATACACTACAATTGGAGA+TGG + chr8_2:61280099-61280118 Msa1259580:intron 35.0%
ATACACTACAATTGGAGATG+GGG + chr8_2:61280101-61280120 Msa1259580:intron 35.0%
AAAAGTGGAATACTGGTGTA+GGG - chr8_2:61280176-61280195 None:intergenic 35.0%
TAAAAGTGGAATACTGGTGT+AGG - chr8_2:61280177-61280196 None:intergenic 35.0%
! GTTATGTCCATACCACATTT+TGG - chr8_2:61280202-61280221 None:intergenic 35.0%
ATACTACTTAATGCATGCCA+GGG - chr8_2:61280241-61280260 None:intergenic 35.0%
TATACTACTTAATGCATGCC+AGG - chr8_2:61280242-61280261 None:intergenic 35.0%
! AATGTGCAGTGGTTTTCAAT+AGG - chr8_2:61280316-61280335 None:intergenic 35.0%
TCTTGTCATTAAGAAGCAGA+AGG + chr8_2:61280414-61280433 Msa1259580:CDS 35.0%
ATAGTCTCATCGAGAGAAAA+CGG - chr8_2:61280602-61280621 None:intergenic 35.0%
GGATATACTGGTGCATTTAT+AGG + chr8_2:61280703-61280722 Msa1259580:intron 35.0%
AGGCAATGATAAACCTAAGA+GGG - chr8_2:61280941-61280960 None:intergenic 35.0%
GGTTTATCATTGCCTCTAAT+TGG + chr8_2:61280946-61280965 Msa1259580:intron 35.0%
TCTTCATAAATTGGCCATAG+CGG - chr8_2:61281033-61281052 None:intergenic 35.0%
TGCTGCCTTTCTTCATAAAT+TGG - chr8_2:61281042-61281061 None:intergenic 35.0%
TGATCAGAGTATGACAGAAA+CGG + chr8_2:61281139-61281158 Msa1259580:intron 35.0%
GATTTACCATTCTTCTACGT+AGG + chr8_2:61281326-61281345 Msa1259580:intron 35.0%
TTTCTTGGTCCAATGTAAAC+AGG + chr8_2:61281422-61281441 Msa1259580:intron 35.0%
TTACAGCCTATGACTACAAA+CGG - chr8_2:61281452-61281471 None:intergenic 35.0%
! TTTTCACCTGAACATAACAG+GGG - chr8_2:61281821-61281840 None:intergenic 35.0%
TACAAATCCTTGGATGTCTT+TGG + chr8_2:61281886-61281905 Msa1259580:intron 35.0%
CTAAAGAGCAAGCTGTAAAT+CGG + chr8_2:61282132-61282151 Msa1259580:CDS 35.0%
TCCTTGGAAGATAGATTATC+TGG - chr8_2:61282251-61282270 None:intergenic 35.0%
GGGGATTCTGATCAAAATTT+AGG + chr8_2:61282435-61282454 Msa1259580:intron 35.0%
GTATATGACTATCTGATCTC+AGG + chr8_2:61282746-61282765 Msa1259580:intron 35.0%
CATGAATAGACAAAAACCTG+TGG - chr8_2:61282783-61282802 None:intergenic 35.0%
GTCTATTCATGCTTCATAGA+TGG + chr8_2:61282792-61282811 Msa1259580:intron 35.0%
TAAGAACTCTTATGCAAACC+AGG + chr8_2:61283038-61283057 Msa1259580:CDS 35.0%
CTGTAAACTTGGGATTAATG+AGG - chr8_2:61283127-61283146 None:intergenic 35.0%
ATACATCAGGCTGTAAACTT+GGG - chr8_2:61283137-61283156 None:intergenic 35.0%
AATACATCAGGCTGTAAACT+TGG - chr8_2:61283138-61283157 None:intergenic 35.0%
GCAGCAGATTTAACATATGA+TGG - chr8_2:61283402-61283421 None:intergenic 35.0%
CTGCTTCTACTGTTGTTAAA+AGG + chr8_2:61283418-61283437 Msa1259580:CDS 35.0%
!! TTGCTTTTATTTCAGCTCTC+AGG + chr8_2:61283514-61283533 Msa1259580:intron 35.0%
TTGTTCATGACCACTTAAAG+TGG + chr8_2:61283834-61283853 Msa1259580:intron 35.0%
!! ACAAATGATGCCACTTTAAG+TGG - chr8_2:61283847-61283866 None:intergenic 35.0%
!!! TGGTTTTGTTTTGGTCATTG+CGG - chr8_2:61283963-61283982 None:intergenic 35.0%
!!! AGGTGGTTTTGGTTTTGTTT+TGG - chr8_2:61283972-61283991 None:intergenic 35.0%
! TCGTTGTCGTTCAAAGATTT+TGG + chr8_2:61284194-61284213 Msa1259580:three_prime_UTR 35.0%
TTCACGATTATCTATCCACA+AGG - chr8_2:61284262-61284281 None:intergenic 35.0%
AATCGTGAAACATGTGTCAA+TGG + chr8_2:61284273-61284292 Msa1259580:three_prime_UTR 35.0%
ATCGTGAAACATGTGTCAAT+GGG + chr8_2:61284274-61284293 Msa1259580:three_prime_UTR 35.0%
ATTGATTACCGGTAATCCTT+TGG + chr8_2:61284312-61284331 Msa1259580:three_prime_UTR 35.0%
TTGATTACCGGTAATCCTTT+GGG + chr8_2:61284313-61284332 Msa1259580:three_prime_UTR 35.0%
TCCACTACGAACATCTTTAA+TGG + chr8_2:61284347-61284366 Msa1259580:three_prime_UTR 35.0%
TCCATTAAAGATGTTCGTAG+TGG - chr8_2:61284351-61284370 None:intergenic 35.0%
TGACCCCACAAAAAATAACT+TGG - chr8_2:61284392-61284411 None:intergenic 35.0%
!! GAACACGTTTTGCTTTTCCT+CGG + chr8_2:61278746-61278765 Msa1259580:five_prime_UTR 40.0%
ATGCCGAGGAATTAAACATC+CGG - chr8_2:61278785-61278804 None:intergenic 40.0%
! AAAATACGATTTTGCCCCCT+CGG - chr8_2:61278815-61278834 None:intergenic 40.0%
TTCACACATTTGAGAAGGCT+GGG - chr8_2:61278848-61278867 None:intergenic 40.0%
TGCTGTTCACACATTTGAGA+AGG - chr8_2:61278853-61278872 None:intergenic 40.0%
TTCTACCCTGCTCATGTAAA+TGG - chr8_2:61278887-61278906 None:intergenic 40.0%
AAGCTCCTTTCGATAAGCAT+CGG - chr8_2:61279114-61279133 None:intergenic 40.0%
!! ATCTGCTTCTTGAGTTGATC+AGG - chr8_2:61279410-61279429 None:intergenic 40.0%
CAAGAAGCAGATTGAGAACT+TGG + chr8_2:61279418-61279437 Msa1259580:CDS 40.0%
GCAAAATAAATGGCTCGCAT+TGG - chr8_2:61279619-61279638 None:intergenic 40.0%
AGTTGGTTAGAAATCTCACC+AGG + chr8_2:61279737-61279756 Msa1259580:intron 40.0%
ACAAAGGGGTTGGAAAGATA+AGG - chr8_2:61279780-61279799 None:intergenic 40.0%
!! TAAGCTGGTTTGATGGTTTG+GGG - chr8_2:61279809-61279828 None:intergenic 40.0%
!! GATAAGCTGGTTTGATGGTT+TGG - chr8_2:61279811-61279830 None:intergenic 40.0%
! AACATAGTGGAGTGATAAGC+TGG - chr8_2:61279824-61279843 None:intergenic 40.0%
AGCTTATCACTCCACTATGT+TGG + chr8_2:61279823-61279842 Msa1259580:intron 40.0%
! TACACCTTTTGCCAACATAG+TGG - chr8_2:61279837-61279856 None:intergenic 40.0%
! TATGTTGGCAAAAGGTGTAC+TGG + chr8_2:61279838-61279857 Msa1259580:intron 40.0%
! ATGTTGGCAAAAGGTGTACT+GGG + chr8_2:61279839-61279858 Msa1259580:intron 40.0%
! TGCCTATAGGCCAATTTTAG+AGG + chr8_2:61279984-61280003 Msa1259580:intron 40.0%
TACACTACAATTGGAGATGG+GGG + chr8_2:61280102-61280121 Msa1259580:intron 40.0%
! CAATCCTTTAGTTGTTTCCC+TGG + chr8_2:61280221-61280240 Msa1259580:intron 40.0%
! AGAGAAAACGGCTTGGATAT+TGG - chr8_2:61280590-61280609 None:intergenic 40.0%
! GTTTTCTCTCGATGAGACTA+TGG + chr8_2:61280601-61280620 Msa1259580:intron 40.0%
! AAACCCTCTGCAAAGTTGAT+AGG - chr8_2:61280647-61280666 None:intergenic 40.0%
GGATGGGAAAGAAGTTTGAT+AGG - chr8_2:61280670-61280689 None:intergenic 40.0%
TCCTTTACTTCTTCAGGGAT+GGG - chr8_2:61280686-61280705 None:intergenic 40.0%
ATCCTTTACTTCTTCAGGGA+TGG - chr8_2:61280687-61280706 None:intergenic 40.0%
! ACCATGAGTAACTTGCAGAT+TGG + chr8_2:61280863-61280882 Msa1259580:intron 40.0%
ACCAATCTGCAAGTTACTCA+TGG - chr8_2:61280867-61280886 None:intergenic 40.0%
GTATTACTTAGAGTAGCCGA+AGG + chr8_2:61280914-61280933 Msa1259580:intron 40.0%
ATAAACCTAAGAGGGACCTT+CGG - chr8_2:61280933-61280952 None:intergenic 40.0%
GAGGCAATGATAAACCTAAG+AGG - chr8_2:61280942-61280961 None:intergenic 40.0%
TATGAAGAAAGGCAGCACTA+TGG + chr8_2:61281045-61281064 Msa1259580:intron 40.0%
!! ATGGCGTTTTATGGTGGAAA+TGG + chr8_2:61281064-61281083 Msa1259580:intron 40.0%
!! TGGCGTTTTATGGTGGAAAT+GGG + chr8_2:61281065-61281084 Msa1259580:intron 40.0%
GATCAGAGTATGACAGAAAC+GGG + chr8_2:61281140-61281159 Msa1259580:intron 40.0%
GTGCTTGGTATATGTTCTCT+TGG - chr8_2:61281203-61281222 None:intergenic 40.0%
TTAGCATCAGAACATGTGCT+TGG - chr8_2:61281218-61281237 None:intergenic 40.0%
AACTTGCCTACGTAGAAGAA+TGG - chr8_2:61281335-61281354 None:intergenic 40.0%
AACGGACAACCTGTTTACAT+TGG - chr8_2:61281434-61281453 None:intergenic 40.0%
! TTTGACTTTAGACAGACCCA+TGG + chr8_2:61281514-61281533 Msa1259580:intron 40.0%
!!! GACAGACCCATGGAATTTTT+TGG + chr8_2:61281524-61281543 Msa1259580:intron 40.0%
GACAGGAACATGATGAGAAA+AGG + chr8_2:61281779-61281798 Msa1259580:intron 40.0%
AGGAACATGATGAGAAAAGG+CGG + chr8_2:61281782-61281801 Msa1259580:intron 40.0%
TTTCACCTGAACATAACAGG+GGG - chr8_2:61281820-61281839 None:intergenic 40.0%
!! ATGTCTTTGGAGCAGTCATT+TGG + chr8_2:61281899-61281918 Msa1259580:intron 40.0%
!! TGTCTTTGGAGCAGTCATTT+GGG + chr8_2:61281900-61281919 Msa1259580:intron 40.0%
! TTTACAGCTTGCTCTTTAGG+TGG - chr8_2:61282131-61282150 None:intergenic 40.0%
! CGATTTACAGCTTGCTCTTT+AGG - chr8_2:61282134-61282153 None:intergenic 40.0%
! ATTTCTCTTTTCGCCTTCAC+TGG - chr8_2:61282216-61282235 None:intergenic 40.0%
GCCAGATAATCTATCTTCCA+AGG + chr8_2:61282247-61282266 Msa1259580:CDS 40.0%
!!! AGAAGCATTGACGCTTTTGT+CGG + chr8_2:61282383-61282402 Msa1259580:intron 40.0%
TTATCCAAAAGGAGTCAGTG+CGG + chr8_2:61282414-61282433 Msa1259580:intron 40.0%
! ATTTAGGATGTCAGTATGGC+AGG + chr8_2:61282451-61282470 Msa1259580:intron 40.0%
! TTTAGGATGTCAGTATGGCA+GGG + chr8_2:61282452-61282471 Msa1259580:intron 40.0%
! GGCTTCTAGCTGAAAAAAGA+TGG + chr8_2:61282696-61282715 Msa1259580:intron 40.0%
AGACAAAAACCTGTGGCATA+TGG - chr8_2:61282776-61282795 None:intergenic 40.0%
TGAATAGCACCAGAATTTGG+TGG - chr8_2:61283000-61283019 None:intergenic 40.0%
GACTGAATAGCACCAGAATT+TGG - chr8_2:61283003-61283022 None:intergenic 40.0%
AAACCAGGAGATCCAAGAAA+TGG + chr8_2:61283053-61283072 Msa1259580:CDS 40.0%
AGATCCAAGAAATGGTTCCT+GGG + chr8_2:61283061-61283080 Msa1259580:CDS 40.0%
ATATGGGGGCCTTAAGATTA+GGG - chr8_2:61283271-61283290 None:intergenic 40.0%
TGATCCTCTTCCTGAAAGTT+TGG - chr8_2:61283351-61283370 None:intergenic 40.0%
CTTTCAGGAAGAGGATCATA+TGG + chr8_2:61283353-61283372 Msa1259580:CDS 40.0%
! TATGATGGTTTCTGAGGAAG+TGG - chr8_2:61283387-61283406 None:intergenic 40.0%
CTTACCATAGATGTGAGTTC+TGG - chr8_2:61283462-61283481 None:intergenic 40.0%
CAGACCACTGAATAAGCTAA+TGG + chr8_2:61283645-61283664 Msa1259580:intron 40.0%
! GTTGCCATTAGCTTATTCAG+TGG - chr8_2:61283652-61283671 None:intergenic 40.0%
! ACTCTAGTGTCGAGAAAAGT+TGG + chr8_2:61283724-61283743 Msa1259580:intron 40.0%
!!! TCATCAATGCTTGGTGCTTT+TGG - chr8_2:61284088-61284107 None:intergenic 40.0%
GTGTATGAGTCATCAATGCT+TGG - chr8_2:61284097-61284116 None:intergenic 40.0%
CTCATACACAGCTTTCTTAG+AGG + chr8_2:61284108-61284127 Msa1259580:CDS 40.0%
TTAGAGGACATGAAATCCCT+TGG + chr8_2:61284124-61284143 Msa1259580:CDS 40.0%
ATCTATCCACAAGGTTTCTG+TGG - chr8_2:61284253-61284272 None:intergenic 40.0%
TCAAATGCCCAAAGGATTAC+CGG - chr8_2:61284323-61284342 None:intergenic 40.0%
TGGATTGATCAAATGCCCAA+AGG - chr8_2:61284331-61284350 None:intergenic 40.0%
TTTGTGGGGTCAAATTGTCA+TGG + chr8_2:61284400-61284419 Msa1259580:three_prime_UTR 40.0%
ATCAGCACAGGAAATCAGAG+TGG - chr8_2:61278382-61278401 None:intergenic 45.0%
CAGCCGGATGTTTAATTCCT+CGG + chr8_2:61278779-61278798 Msa1259580:five_prime_UTR 45.0%
GTTCACACATTTGAGAAGGC+TGG - chr8_2:61278849-61278868 None:intergenic 45.0%
TCAATGACGAAGACGACCAA+AGG + chr8_2:61279068-61279087 Msa1259580:exon 45.0%
!! CCTTTCGATAAGCATCGGTA+GGG - chr8_2:61279109-61279128 None:intergenic 45.0%
!! TCCTTTCGATAAGCATCGGT+AGG - chr8_2:61279110-61279129 None:intergenic 45.0%
TCGAAAGGAGCTTCGCAAAA+AGG + chr8_2:61279121-61279140 Msa1259580:CDS 45.0%
AAGAAAGAAGGTGAGGGATG+TGG + chr8_2:61279367-61279386 Msa1259580:CDS 45.0%
AGAAAGAAGGTGAGGGATGT+GGG + chr8_2:61279368-61279387 Msa1259580:CDS 45.0%
CATCACCATCAGCATTATGC+TGG + chr8_2:61279528-61279547 Msa1259580:intron 45.0%
!! GGAGTGATAAGCTGGTTTGA+TGG - chr8_2:61279816-61279835 None:intergenic 45.0%
CACTCCACTATGTTGGCAAA+AGG + chr8_2:61279830-61279849 Msa1259580:intron 45.0%
GGAATACTGGTGTAGGGATT+AGG - chr8_2:61280170-61280189 None:intergenic 45.0%
CATGCCAGGGAAACAACTAA+AGG - chr8_2:61280228-61280247 None:intergenic 45.0%
CCACAACAAACAATGTGCAG+TGG - chr8_2:61280327-61280346 None:intergenic 45.0%
! CCACTGCACATTGTTTGTTG+TGG + chr8_2:61280324-61280343 Msa1259580:intron 45.0%
!! CACATTGTTTGTTGTGGCAG+AGG + chr8_2:61280330-61280349 Msa1259580:intron 45.0%
AAACAGTGAGAACTGAGCTC+TGG + chr8_2:61280554-61280573 Msa1259580:intron 45.0%
!! CTGCAAAGTTGATAGGCTCA+GGG - chr8_2:61280640-61280659 None:intergenic 45.0%
!! TCTGCAAAGTTGATAGGCTC+AGG - chr8_2:61280641-61280660 None:intergenic 45.0%
TGAGCCTATCAACTTTGCAG+AGG + chr8_2:61280640-61280659 Msa1259580:intron 45.0%
GAGCCTATCAACTTTGCAGA+GGG + chr8_2:61280641-61280660 Msa1259580:intron 45.0%
TCCCATCCCTGAAGAAGTAA+AGG + chr8_2:61280682-61280701 Msa1259580:intron 45.0%
ATAGTGGCCATGTCAGATTG+CGG + chr8_2:61280989-61281008 Msa1259580:intron 45.0%
CATAAATTGGCCATAGCGGT+TGG - chr8_2:61281029-61281048 None:intergenic 45.0%
! AGCACTATGGCGTTTTATGG+TGG + chr8_2:61281058-61281077 Msa1259580:intron 45.0%
!! GGCGTTTTATGGTGGAAATG+GGG + chr8_2:61281066-61281085 Msa1259580:intron 45.0%
GCAAGTTCCACTAACAGTAG+CGG + chr8_2:61281348-61281367 Msa1259580:intron 45.0%
! TTCCACTAACAGTAGCGGAA+GGG + chr8_2:61281353-61281372 Msa1259580:intron 45.0%
GGTTGTCCGTTTGTAGTCAT+AGG + chr8_2:61281443-61281462 Msa1259580:intron 45.0%
GGAACATGATGAGAAAAGGC+GGG + chr8_2:61281783-61281802 Msa1259580:intron 45.0%
!! GTCTTTGGAGCAGTCATTTG+GGG + chr8_2:61281901-61281920 Msa1259580:intron 45.0%
TCTGCACTTGTTCTCCTTTG+AGG - chr8_2:61281930-61281949 None:intergenic 45.0%
GAACTAGCATCAGGAATTGG+TGG - chr8_2:61281981-61282000 None:intergenic 45.0%
GCTGAACTAGCATCAGGAAT+TGG - chr8_2:61281984-61282003 None:intergenic 45.0%
AATCTATCTTCCAAGGAGCC+TGG + chr8_2:61282254-61282273 Msa1259580:CDS 45.0%
AAAAATGAGCCTACCTGACC+AGG - chr8_2:61282275-61282294 None:intergenic 45.0%
TATCCAAAAGGAGTCAGTGC+GGG + chr8_2:61282415-61282434 Msa1259580:intron 45.0%
TCAGGTATACCATATGCCAC+AGG + chr8_2:61282764-61282783 Msa1259580:intron 45.0%
TGGCTACTAGACACTTGTCA+TGG + chr8_2:61282812-61282831 Msa1259580:intron 45.0%
ATGGTTGCCAAATGCCCAAA+TGG + chr8_2:61282831-61282850 Msa1259580:intron 45.0%
TGGTTGCCAAATGCCCAAAT+GGG + chr8_2:61282832-61282851 Msa1259580:intron 45.0%
TGTGTTCCCATTTGGGCATT+TGG - chr8_2:61282841-61282860 None:intergenic 45.0%
! GAATTTGGTGGCATACGACT+TGG - chr8_2:61282988-61283007 None:intergenic 45.0%
AGTCGTATGCCACCAAATTC+TGG + chr8_2:61282988-61283007 Msa1259580:CDS 45.0%
!! TCTGGTGCTATTCAGTCTGA+TGG + chr8_2:61283006-61283025 Msa1259580:CDS 45.0%
GAACCATTTCTTGGATCTCC+TGG - chr8_2:61283059-61283078 None:intergenic 45.0%
GAGATCCAAGAAATGGTTCC+TGG + chr8_2:61283060-61283079 Msa1259580:CDS 45.0%
ATTAATGAGGGTCCTGGACA+AGG - chr8_2:61283114-61283133 None:intergenic 45.0%
TGGGAATCGAGATATTCCAG+GGG - chr8_2:61283163-61283182 None:intergenic 45.0%
GTGGGAATCGAGATATTCCA+GGG - chr8_2:61283164-61283183 None:intergenic 45.0%
TGATGGTCCCCCTAATCTTA+AGG + chr8_2:61283259-61283278 Msa1259580:CDS 45.0%
TATGGGGGCCTTAAGATTAG+GGG - chr8_2:61283270-61283289 None:intergenic 45.0%
CATATGGGGGCCTTAAGATT+AGG - chr8_2:61283272-61283291 None:intergenic 45.0%
CTAATCTTAAGGCCCCCATA+TGG + chr8_2:61283270-61283289 Msa1259580:CDS 45.0%
TCTTCCTGAAAGTTTGGAGG+AGG - chr8_2:61283345-61283364 None:intergenic 45.0%
TCCTCCAAACTTTCAGGAAG+AGG + chr8_2:61283344-61283363 Msa1259580:CDS 45.0%
TCCTCTTCCTGAAAGTTTGG+AGG - chr8_2:61283348-61283367 None:intergenic 45.0%
CACTCCAGAACTCACATCTA+TGG + chr8_2:61283455-61283474 Msa1259580:CDS 45.0%
AGTTTATGCCCATGTAGCAG+TGG - chr8_2:61283707-61283726 None:intergenic 45.0%
! ACTGTTGACACAGGTGGTTT+TGG - chr8_2:61283983-61284002 None:intergenic 45.0%
ATGGTTGAGATCACTGTGAG+TGG + chr8_2:61284155-61284174 Msa1259580:exon 45.0%
TTTGAACGACAACGACTGAG+AGG - chr8_2:61284189-61284208 None:intergenic 45.0%
ATGACGAAGACGACCAAAGG+CGG + chr8_2:61279071-61279090 Msa1259580:CDS 50.0%
GTTCATCACCTTACCGCCTT+TGG - chr8_2:61279087-61279106 None:intergenic 50.0%
CCCTACCGATGCTTATCGAA+AGG + chr8_2:61279106-61279125 Msa1259580:CDS 50.0%
GAAAGAAGGTGAGGGATGTG+GGG + chr8_2:61279369-61279388 Msa1259580:CDS 50.0%
AGGCTGATGTGACAGAACAG+TGG + chr8_2:61279685-61279704 Msa1259580:intron 50.0%
GTATTGCAGGTTCGAATGCC+TGG - chr8_2:61279758-61279777 None:intergenic 50.0%
GTTTGGGGAGAGACACAAAG+GGG - chr8_2:61279794-61279813 None:intergenic 50.0%
GGTTTGGGGAGAGACACAAA+GGG - chr8_2:61279795-61279814 None:intergenic 50.0%
! TGGTTTGGGGAGAGACACAA+AGG - chr8_2:61279796-61279815 None:intergenic 50.0%
! TTTGTTGTGGCAGAGGCTGA+TGG + chr8_2:61280337-61280356 Msa1259580:intron 50.0%
CTCATCGAGAGAAAACGGCT+TGG - chr8_2:61280597-61280616 None:intergenic 50.0%
! GGATTTTTCGCCAACCGCTA+TGG + chr8_2:61281016-61281035 Msa1259580:intron 50.0%
! GGCAGCACTATGGCGTTTTA+TGG + chr8_2:61281055-61281074 Msa1259580:intron 50.0%
! GTTCCACTAACAGTAGCGGA+AGG + chr8_2:61281352-61281371 Msa1259580:intron 50.0%
! AGTAGCGGAAGGGACCTATT+GGG + chr8_2:61281363-61281382 Msa1259580:intron 50.0%
TGATGAGAAAAGGCGGGAGA+AGG + chr8_2:61281789-61281808 Msa1259580:CDS 50.0%
GATGAGAAAAGGCGGGAGAA+GGG + chr8_2:61281790-61281809 Msa1259580:CDS 50.0%
GACTGCTCCAAAGACATCCA+AGG - chr8_2:61281896-61281915 None:intergenic 50.0%
! GTCATTTGGGGCTTCCTCAA+AGG + chr8_2:61281913-61281932 Msa1259580:intron 50.0%
!! ATCAGGAATTGGTGGTGGTG+GGG - chr8_2:61281973-61281992 None:intergenic 50.0%
!! CATCAGGAATTGGTGGTGGT+GGG - chr8_2:61281974-61281993 None:intergenic 50.0%
CTAGCATCAGGAATTGGTGG+TGG - chr8_2:61281978-61281997 None:intergenic 50.0%
CCATCAGCTGAACTAGCATC+AGG - chr8_2:61281990-61282009 None:intergenic 50.0%
CCTGATGCTAGTTCAGCTGA+TGG + chr8_2:61281987-61282006 Msa1259580:CDS 50.0%
! GGAGGTGGTGGTAATGATAC+AGG - chr8_2:61282083-61282102 None:intergenic 50.0%
! ACAGCTTGCTCTTTAGGTGG+AGG - chr8_2:61282128-61282147 None:intergenic 50.0%
!!! TGAGACTGTTTTAGGGGTGG+AGG - chr8_2:61282176-61282195 None:intergenic 50.0%
! AGGCGGCTGAGACTGTTTTA+GGG - chr8_2:61282183-61282202 None:intergenic 50.0%
ATCCAAAAGGAGTCAGTGCG+GGG + chr8_2:61282416-61282435 Msa1259580:intron 50.0%
! TTTGGTGGCATACGACTTGG+TGG - chr8_2:61282985-61283004 None:intergenic 50.0%
CAAGGAGGTTGTTGTCTTGG+AGG - chr8_2:61283096-61283115 None:intergenic 50.0%
GGACAAGGAGGTTGTTGTCT+TGG - chr8_2:61283099-61283118 None:intergenic 50.0%
AGACAACAACCTCCTTGTCC+AGG + chr8_2:61283099-61283118 Msa1259580:CDS 50.0%
CTTGGGATTAATGAGGGTCC+TGG - chr8_2:61283120-61283139 None:intergenic 50.0%
ATTCCAGGGGGCAATACATC+AGG - chr8_2:61283150-61283169 None:intergenic 50.0%
GGGAATCGAGATATTCCAGG+GGG - chr8_2:61283162-61283181 None:intergenic 50.0%
GGTGGGAATCGAGATATTCC+AGG - chr8_2:61283165-61283184 None:intergenic 50.0%
AATGGAGGCCTCATATCAGG+TGG - chr8_2:61283198-61283217 None:intergenic 50.0%
!! GGTAATGGAGGCCTCATATC+AGG - chr8_2:61283201-61283220 None:intergenic 50.0%
! AGTCCAGTCACAGGTAATGG+AGG - chr8_2:61283213-61283232 None:intergenic 50.0%
GGAAGTCCAGTCACAGGTAA+TGG - chr8_2:61283216-61283235 None:intergenic 50.0%
TTACCTGTGACTGGACTTCC+TGG + chr8_2:61283216-61283235 Msa1259580:CDS 50.0%
ATTAGGGGGACCATCATTCC+AGG - chr8_2:61283255-61283274 None:intergenic 50.0%
ATGGGGGCCTTAAGATTAGG+GGG - chr8_2:61283269-61283288 None:intergenic 50.0%
AGTGGTGGTCTCATCATTGG+AGG - chr8_2:61283312-61283331 None:intergenic 50.0%
GGAAGTGGTGGTCTCATCAT+TGG - chr8_2:61283315-61283334 None:intergenic 50.0%
TGAAAGTTTGGAGGAGGACC+AGG - chr8_2:61283339-61283358 None:intergenic 50.0%
TGGTCCTCCTCCAAACTTTC+AGG + chr8_2:61283338-61283357 Msa1259580:CDS 50.0%
! TCTGGAGTGTGCTGAGCTAA+TGG - chr8_2:61283444-61283463 None:intergenic 50.0%
TCCAGTGATCCACTGCTACA+TGG + chr8_2:61283695-61283714 Msa1259580:intron 50.0%
CCAGTGATCCACTGCTACAT+GGG + chr8_2:61283696-61283715 Msa1259580:intron 50.0%
ACTAGGTTCCTGCATCTGTG+CGG + chr8_2:61283924-61283943 Msa1259580:intron 50.0%
ACTGACACTGTTGACACAGG+TGG - chr8_2:61283989-61284008 None:intergenic 50.0%
GACACTGACACTGTTGACAC+AGG - chr8_2:61283992-61284011 None:intergenic 50.0%
AGAACAGTCCCTGTGACACT+CGG + chr8_2:61284019-61284038 Msa1259580:CDS 50.0%
!! GATGACGAGCTCACTGATTC+TGG - chr8_2:61284061-61284080 None:intergenic 50.0%
AAATCCCTTGGCGCACTTGA+TGG + chr8_2:61284136-61284155 Msa1259580:CDS 50.0%
TCAACCATCAAGTGCGCCAA+GGG - chr8_2:61284143-61284162 None:intergenic 50.0%
GTTGAGATCACTGTGAGTGG+TGG + chr8_2:61284158-61284177 Msa1259580:exon 50.0%
GTGGGGTCAAATTGTCATGG+AGG + chr8_2:61284403-61284422 Msa1259580:three_prime_UTR 50.0%
CCTCGGTAGTTAACTGCAGC+CGG + chr8_2:61278763-61278782 Msa1259580:five_prime_UTR 55.0%
TCCTCGGCATTTAACTGCCG+AGG + chr8_2:61278795-61278814 Msa1259580:five_prime_UTR 55.0%
CCTCGGCATTTAACTGCCGA+GGG + chr8_2:61278796-61278815 Msa1259580:five_prime_UTR 55.0%
CTCGGCATTTAACTGCCGAG+GGG + chr8_2:61278797-61278816 Msa1259580:five_prime_UTR 55.0%
TCGGCATTTAACTGCCGAGG+GGG + chr8_2:61278798-61278817 Msa1259580:five_prime_UTR 55.0%
GAAGACGACCAAAGGCGGTA+AGG + chr8_2:61279076-61279095 Msa1259580:CDS 55.0%
TTGGAGATGGGGGTCAGTCT+AGG + chr8_2:61280112-61280131 Msa1259580:intron 55.0%
AGTAGCCGAAGGTCCCTCTT+AGG + chr8_2:61280925-61280944 Msa1259580:intron 55.0%
TCCACCACCGCAATCTGACA+TGG - chr8_2:61280999-61281018 None:intergenic 55.0%
GTCCCTTCCGCTACTGTTAG+TGG - chr8_2:61281358-61281377 None:intergenic 55.0%
! CAGTAGCGGAAGGGACCTAT+TGG + chr8_2:61281362-61281381 Msa1259580:intron 55.0%
GTGAGCCCCCTGTTATGTTC+AGG + chr8_2:61281812-61281831 Msa1259580:CDS 55.0%
!! TCAGGAATTGGTGGTGGTGG+GGG - chr8_2:61281972-61281991 None:intergenic 55.0%
!! GCATCAGGAATTGGTGGTGG+TGG - chr8_2:61281975-61281994 None:intergenic 55.0%
ATTTGGAGGCAAGGGAGGTG+GGG - chr8_2:61282045-61282064 None:intergenic 55.0%
GATTTGGAGGCAAGGGAGGT+GGG - chr8_2:61282046-61282065 None:intergenic 55.0%
TCTTTAGGTGGAGGACCAGG+AGG - chr8_2:61282119-61282138 None:intergenic 55.0%
TGCTCTTTAGGTGGAGGACC+AGG - chr8_2:61282122-61282141 None:intergenic 55.0%
!!! TGTTTTAGGGGTGGAGGAGG+AGG - chr8_2:61282170-61282189 None:intergenic 55.0%
!!! GACTGTTTTAGGGGTGGAGG+AGG - chr8_2:61282173-61282192 None:intergenic 55.0%
!!! GGCTGAGACTGTTTTAGGGG+TGG - chr8_2:61282179-61282198 None:intergenic 55.0%
!! GGCGGCTGAGACTGTTTTAG+GGG - chr8_2:61282182-61282201 None:intergenic 55.0%
! GAGGCGGCTGAGACTGTTTT+AGG - chr8_2:61282184-61282203 None:intergenic 55.0%
! TTTTCGCCTTCACTGGTGCC+AGG - chr8_2:61282209-61282228 None:intergenic 55.0%
ATCTTCCAAGGAGCCTGGTC+AGG + chr8_2:61282259-61282278 Msa1259580:CDS 55.0%
!!! ATCCCCGCACTGACTCCTTT+TGG - chr8_2:61282421-61282440 None:intergenic 55.0%
!! ATACGACTTGGTGGAGGAGG+CGG - chr8_2:61282976-61282995 None:intergenic 55.0%
GAGGCCCAGGAACCATTTCT+TGG - chr8_2:61283068-61283087 None:intergenic 55.0%
TGTTGTCTTGGAGGAGGAGG+AGG - chr8_2:61283087-61283106 None:intergenic 55.0%
GGTTGTTGTCTTGGAGGAGG+AGG - chr8_2:61283090-61283109 None:intergenic 55.0%
GGAGGTTGTTGTCTTGGAGG+AGG - chr8_2:61283093-61283112 None:intergenic 55.0%
AATGAGGGTCCTGGACAAGG+AGG - chr8_2:61283111-61283130 None:intergenic 55.0%
!! CTCATATCAGGTGGTGGTGG+GGG - chr8_2:61283189-61283208 None:intergenic 55.0%
! CCTCATATCAGGTGGTGGTG+GGG - chr8_2:61283190-61283209 None:intergenic 55.0%
! GCCTCATATCAGGTGGTGGT+GGG - chr8_2:61283191-61283210 None:intergenic 55.0%
AGGCCTCCATTACCTGTGAC+TGG + chr8_2:61283207-61283226 Msa1259580:CDS 55.0%
TGACCAGGAAGTCCAGTCAC+AGG - chr8_2:61283222-61283241 None:intergenic 55.0%
TGTGACTGGACTTCCTGGTC+AGG + chr8_2:61283221-61283240 Msa1259580:CDS 55.0%
GGTGGTCTCATCATTGGAGG+AGG - chr8_2:61283309-61283328 None:intergenic 55.0%
ATGAGACCACCACTTCCACC+TGG + chr8_2:61283318-61283337 Msa1259580:CDS 55.0%
AAGTTTGGAGGAGGACCAGG+TGG - chr8_2:61283336-61283355 None:intergenic 55.0%
CCCATGTAGCAGTGGATCAC+TGG - chr8_2:61283699-61283718 None:intergenic 55.0%
CTAGGTTCCTGCATCTGTGC+GGG + chr8_2:61283925-61283944 Msa1259580:intron 55.0%
TGCATCTGTGCGGGTGAGAA+GGG + chr8_2:61283934-61283953 Msa1259580:CDS 55.0%
GAACAGTCCCTGTGACACTC+GGG + chr8_2:61284020-61284039 Msa1259580:CDS 55.0%
TAGTTGGCCCGAGTGTCACA+GGG - chr8_2:61284030-61284049 None:intergenic 55.0%
ATAGTTGGCCCGAGTGTCAC+AGG - chr8_2:61284031-61284050 None:intergenic 55.0%
CTCAACCATCAAGTGCGCCA+AGG - chr8_2:61284144-61284163 None:intergenic 55.0%
CCGGCTGCAGTTAACTACCG+AGG - chr8_2:61278766-61278785 None:intergenic 60.0%
CCCTCGGCAGTTAAATGCCG+AGG - chr8_2:61278799-61278818 None:intergenic 60.0%
GGGGAGAGACACAAAGGGGT+TGG - chr8_2:61279790-61279809 None:intergenic 60.0%
! GGCAGAGGCTGATGGTGCAT+TGG + chr8_2:61280345-61280364 Msa1259580:intron 60.0%
GTGGCCATGTCAGATTGCGG+TGG + chr8_2:61280992-61281011 Msa1259580:intron 60.0%
GCCATGTCAGATTGCGGTGG+TGG + chr8_2:61280995-61281014 Msa1259580:intron 60.0%
GGAGGCAGTGGCAAAGATGC+AGG - chr8_2:61282023-61282042 None:intergenic 60.0%
TTTGGAGGCAAGGGAGGTGG+GGG - chr8_2:61282044-61282063 None:intergenic 60.0%
GGATTTGGAGGCAAGGGAGG+TGG - chr8_2:61282047-61282066 None:intergenic 60.0%
GCAGCGGGATTTGGAGGCAA+GGG - chr8_2:61282053-61282072 None:intergenic 60.0%
AGCAGCGGGATTTGGAGGCA+AGG - chr8_2:61282054-61282073 None:intergenic 60.0%
! TGATACAGGCACCGCAGCAG+CGG - chr8_2:61282069-61282088 None:intergenic 60.0%
TTAGGTGGAGGACCAGGAGG+TGG - chr8_2:61282116-61282135 None:intergenic 60.0%
TTAGGGGTGGAGGAGGAGGT+GGG - chr8_2:61282166-61282185 None:intergenic 60.0%
TTTAGGGGTGGAGGAGGAGG+TGG - chr8_2:61282167-61282186 None:intergenic 60.0%
TCCAAGGAGCCTGGTCAGGT+AGG + chr8_2:61282263-61282282 Msa1259580:intron 60.0%
!! GGCATACGACTTGGTGGAGG+AGG - chr8_2:61282979-61282998 None:intergenic 60.0%
!! GGTGGCATACGACTTGGTGG+AGG - chr8_2:61282982-61283001 None:intergenic 60.0%
CAGCCTGATGTATTGCCCCC+TGG + chr8_2:61283144-61283163 Msa1259580:CDS 60.0%
!! ATATCAGGTGGTGGTGGGGG+CGG - chr8_2:61283186-61283205 None:intergenic 60.0%
CCCCACCACCACCTGATATG+AGG + chr8_2:61283187-61283206 Msa1259580:CDS 60.0%
! GGCCTCATATCAGGTGGTGG+TGG - chr8_2:61283192-61283211 None:intergenic 60.0%
GGAGGCCTCATATCAGGTGG+TGG - chr8_2:61283195-61283214 None:intergenic 60.0%
GGCACCTCCTCCTGGAATGA+TGG + chr8_2:61283242-61283261 Msa1259580:CDS 60.0%
GGGACCATCATTCCAGGAGG+AGG - chr8_2:61283249-61283268 None:intergenic 60.0%
AGGGGGACCATCATTCCAGG+AGG - chr8_2:61283252-61283271 None:intergenic 60.0%
CCAGGTGGAGGACCATATGG+GGG - chr8_2:61283285-61283304 None:intergenic 60.0%
CCCAGGTGGAGGACCATATG+GGG - chr8_2:61283286-61283305 None:intergenic 60.0%
CCCCATATGGTCCTCCACCT+GGG + chr8_2:61283283-61283302 Msa1259580:CDS 60.0%
GCCCAGGTGGAGGACCATAT+GGG - chr8_2:61283287-61283306 None:intergenic 60.0%
ATCATTGGAGGAGGCCCAGG+TGG - chr8_2:61283300-61283319 None:intergenic 60.0%
CTCATCATTGGAGGAGGCCC+AGG - chr8_2:61283303-61283322 None:intergenic 60.0%
CTTCTCACCCGCACAGATGC+AGG - chr8_2:61283935-61283954 None:intergenic 60.0%
CTGCATCTGTGCGGGTGAGA+AGG + chr8_2:61283933-61283952 Msa1259580:CDS 60.0%
TGGGGGCCACAGAAACCTTG+TGG + chr8_2:61284244-61284263 Msa1259580:three_prime_UTR 60.0%
GCGGGATTTGGAGGCAAGGG+AGG - chr8_2:61282050-61282069 None:intergenic 65.0%
GCCTCCAAATCCCGCTGCTG+CGG + chr8_2:61282055-61282074 Msa1259580:CDS 65.0%
ACCGCAGCAGCGGGATTTGG+AGG - chr8_2:61282059-61282078 None:intergenic 65.0%
! GATACAGGCACCGCAGCAGC+GGG - chr8_2:61282068-61282087 None:intergenic 65.0%
GGAGGAGGAGGTGGGGGTAA+AGG - chr8_2:61282158-61282177 None:intergenic 65.0%
TAGGGGTGGAGGAGGAGGTG+GGG - chr8_2:61282165-61282184 None:intergenic 65.0%
! TCACTGGTGCCAGGTGGAGG+CGG - chr8_2:61282200-61282219 None:intergenic 65.0%
! CCTTCACTGGTGCCAGGTGG+AGG - chr8_2:61282203-61282222 None:intergenic 65.0%
CCTCCACCTGGCACCAGTGA+AGG + chr8_2:61282200-61282219 Msa1259580:CDS 65.0%
! TCGCCTTCACTGGTGCCAGG+TGG - chr8_2:61282206-61282225 None:intergenic 65.0%
GCCTACCTGACCAGGCTCCT+TGG - chr8_2:61282267-61282286 None:intergenic 65.0%
CCCCCATATGGTCCTCCACC+TGG + chr8_2:61283282-61283301 Msa1259580:CDS 65.0%
GGCCCAGGTGGAGGACCATA+TGG - chr8_2:61283288-61283307 None:intergenic 65.0%
ATTGGAGGAGGCCCAGGTGG+AGG - chr8_2:61283297-61283316 None:intergenic 65.0%
GGAGGACCAGGTGGAAGTGG+TGG - chr8_2:61283327-61283346 None:intergenic 65.0%
GGAGGAGGACCAGGTGGAAG+TGG - chr8_2:61283330-61283349 None:intergenic 65.0%
AAGGGAGGTGGGGGAGGCAG+TGG - chr8_2:61282035-61282054 None:intergenic 70.0%
GGCACCGCAGCAGCGGGATT+TGG - chr8_2:61282062-61282081 None:intergenic 70.0%
! GGTGGCGGCAAAGGAGGTGG+TGG - chr8_2:61282095-61282114 None:intergenic 70.0%
!! GGTGGTGGCGGCAAAGGAGG+TGG - chr8_2:61282098-61282117 None:intergenic 70.0%
!! GGAGGTGGTGGCGGCAAAGG+AGG - chr8_2:61282101-61282120 None:intergenic 70.0%
!! CCAGGAGGTGGTGGCGGCAA+AGG - chr8_2:61282104-61282123 None:intergenic 70.0%
CCTTTGCCGCCACCACCTCC+TGG + chr8_2:61282101-61282120 Msa1259580:CDS 70.0%
! GGAGGACCAGGAGGTGGTGG+CGG - chr8_2:61282110-61282129 None:intergenic 70.0%
GGTGGAGGACCAGGAGGTGG+TGG - chr8_2:61282113-61282132 None:intergenic 70.0%
AGGGGTGGAGGAGGAGGTGG+GGG - chr8_2:61282164-61282183 None:intergenic 70.0%
CAGTCTCAGCCGCCTCCACC+TGG + chr8_2:61282188-61282207 Msa1259580:CDS 70.0%
!! CGACTTGGTGGAGGAGGCGG+CGG - chr8_2:61282973-61282992 None:intergenic 70.0%
CTTGGAGGAGGAGGAGGCCC+AGG - chr8_2:61283081-61283100 None:intergenic 70.0%
!! CCAGGAGGAGGTGCCTGACC+AGG - chr8_2:61283237-61283256 None:intergenic 70.0%
CCTGGTCAGGCACCTCCTCC+TGG + chr8_2:61283234-61283253 Msa1259580:CDS 70.0%
GGAGGCAAGGGAGGTGGGGG+AGG - chr8_2:61282041-61282060 None:intergenic 75.0%
CTTGGTGGAGGAGGCGGCGG+AGG - chr8_2:61282970-61282989 None:intergenic 75.0%
!! CAGGTGGTGGTGGGGGCGGT+GGG - chr8_2:61283182-61283201 None:intergenic 75.0%
!! TCAGGTGGTGGTGGGGGCGG+TGG - chr8_2:61283183-61283202 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 61278240 61284602 61278240 ID=Msa1259580;Name=Msa1259580
chr8_2 mRNA 61278240 61284602 61278240 ID=Msa1259580-mRNA-1;Parent=Msa1259580;Name=Msa1259580-mRNA-1;_AED=0.26;_eAED=0.26;_QI=831|1|1|1|1|1|7|440|477
chr8_2 exon 61278240 61279154 61278240 ID=Msa1259580-mRNA-1:exon:19286;Parent=Msa1259580-mRNA-1
chr8_2 exon 61279356 61279449 61279356 ID=Msa1259580-mRNA-1:exon:19287;Parent=Msa1259580-mRNA-1
chr8_2 exon 61280350 61280435 61280350 ID=Msa1259580-mRNA-1:exon:19288;Parent=Msa1259580-mRNA-1
chr8_2 exon 61281784 61281833 61281784 ID=Msa1259580-mRNA-1:exon:19289;Parent=Msa1259580-mRNA-1
chr8_2 exon 61281914 61282280 61281914 ID=Msa1259580-mRNA-1:exon:19290;Parent=Msa1259580-mRNA-1
chr8_2 exon 61282958 61283476 61282958 ID=Msa1259580-mRNA-1:exon:19291;Parent=Msa1259580-mRNA-1
chr8_2 exon 61283929 61284602 61283929 ID=Msa1259580-mRNA-1:exon:19292;Parent=Msa1259580-mRNA-1
chr8_2 five_prime_UTR 61278240 61279070 61278240 ID=Msa1259580-mRNA-1:five_prime_utr;Parent=Msa1259580-mRNA-1
chr8_2 CDS 61279071 61279154 61279071 ID=Msa1259580-mRNA-1:cds;Parent=Msa1259580-mRNA-1
chr8_2 CDS 61279356 61279449 61279356 ID=Msa1259580-mRNA-1:cds;Parent=Msa1259580-mRNA-1
chr8_2 CDS 61280350 61280435 61280350 ID=Msa1259580-mRNA-1:cds;Parent=Msa1259580-mRNA-1
chr8_2 CDS 61281784 61281833 61281784 ID=Msa1259580-mRNA-1:cds;Parent=Msa1259580-mRNA-1
chr8_2 CDS 61281914 61282280 61281914 ID=Msa1259580-mRNA-1:cds;Parent=Msa1259580-mRNA-1
chr8_2 CDS 61282958 61283476 61282958 ID=Msa1259580-mRNA-1:cds;Parent=Msa1259580-mRNA-1
chr8_2 CDS 61283929 61284162 61283929 ID=Msa1259580-mRNA-1:cds;Parent=Msa1259580-mRNA-1
chr8_2 three_prime_UTR 61284163 61284602 61284163 ID=Msa1259580-mRNA-1:three_prime_utr;Parent=Msa1259580-mRNA-1
Gene Sequence

>Msa1259580

ATGACGAAGACGACCAAAGGCGGTAAGGTGATGAACCCTACCGATGCTTATCGAAAGGAGCTTCGCAAAAAGGAATTGAAAAGGAATAAAAAAGAAAGAAAGAAGGTGAGGGATGTGGGGATTTTGAAAAAAGATCCTGATCAACTCAAGAAGCAGATTGAGAACTTGGAAATGATGAAGGCTGATGGTGCATTGGATAAAGCAAGAAAGCACAAAAGTAAGCAACTAAAACAAACACTTGATCTTGTCATTAAGAAGCAGAAGGAACATGATGAGAAAAGGCGGGAGAAGGGTGAGCCCCCTGTTATGTTCAGTCATTTGGGGCTTCCTCAAAGGAGAACAAGTGCAGAAGAAGAAGAGATAGTTAATCCCCCACCACCACCAATTCCTGATGCTAGTTCAGCTGATGGTGCTGTTTTACCTGCATCTTTGCCACTGCCTCCCCCACCTCCCTTGCCTCCAAATCCCGCTGCTGCGGTGCCTGTATCATTACCACCACCTCCTTTGCCGCCACCACCTCCTGGTCCTCCACCTAAAGAGCAAGCTGTAAATCGGCCTTTACCCCCACCTCCTCCTCCACCCCTAAAACAGTCTCAGCCGCCTCCACCTGGCACCAGTGAAGGCGAAAAGAGAAATCAATATGCATTGCCAGATAATCTATCTTCCAAGGAGCCTGGTCAGGTGCATCTTCCTCCGCCGCCTCCTCCACCAAGTCGTATGCCACCAAATTCTGGTGCTATTCAGTCTGATGGTACTGACAATAAGAACTCTTATGCAAACCAGGAGATCCAAGAAATGGTTCCTGGGCCTCCTCCTCCTCCAAGACAACAACCTCCTTGTCCAGGACCCTCATTAATCCCAAGTTTACAGCCTGATGTATTGCCCCCTGGAATATCTCGATTCCCACCGCCCCCACCACCACCTGATATGAGGCCTCCATTACCTGTGACTGGACTTCCTGGTCAGGCACCTCCTCCTGGAATGATGGTCCCCCTAATCTTAAGGCCCCCATATGGTCCTCCACCTGGGCCTCCTCCAATGATGAGACCACCACTTCCACCTGGTCCTCCTCCAAACTTTCAGGAAGAGGATCATATGGCAAGTAAGCCACTTCCTCAGAAACCATCATATGTTAAATCTGCTGCTTCTACTGTTGTTAAAAGGCCATTAGCTCAGCACACTCCAGAACTCACATCTATGGTTCCTGCATCTGTGCGGGTGAGAAGGGAGACCGCAATGACCAAAACAAAACCAAAACCACCTGTGTCAACAGTGTCAGTGTCAACAGCTAGAACAGTCCCTGTGACACTCGGGCCAACTATTGTAAAACCAGAATCAGTGAGCTCGTCATCTGCTCCAAAAGCACCAAGCATTGATGACTCATACACAGCTTTCTTAGAGGACATGAAATCCCTTGGCGCACTTGATGGTTGA
Protein sequence

>Msa1259580

MTKTTKGGKVMNPTDAYRKELRKKELKRNKKERKKVRDVGILKKDPDQLKKQIENLEMMKADGALDKARKHKSKQLKQTLDLVIKKQKEHDEKRREKGEPPVMFSHLGLPQRRTSAEEEEIVNPPPPPIPDASSADGAVLPASLPLPPPPPLPPNPAAAVPVSLPPPPLPPPPPGPPPKEQAVNRPLPPPPPPPLKQSQPPPPGTSEGEKRNQYALPDNLSSKEPGQVHLPPPPPPPSRMPPNSGAIQSDGTDNKNSYANQEIQEMVPGPPPPPRQQPPCPGPSLIPSLQPDVLPPGISRFPPPPPPPDMRPPLPVTGLPGQAPPPGMMVPLILRPPYGPPPGPPPMMRPPLPPGPPPNFQEEDHMASKPLPQKPSYVKSAASTVVKRPLAQHTPELTSMVPASVRVRRETAMTKTKPKPPVSTVSVSTARTVPVTLGPTIVKPESVSSSSAPKAPSIDDSYTAFLEDMKSLGALDG*