Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1211310 | sp|G3CHK5|ELF5_PONTR | 83.019 | 106 | 18 | 0 | 3 | 108 | 2 | 107 | 1.73e-52 | 188 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1211310 | A0A072UQ16 | 93.958 | 480 | 25 | 3 | 1 | 477 | 1 | 479 | 0.0 | 594 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0661190 | Msa1211310 | 0.800332 | 1.514658e-48 | -8.615850e-47 |
| Msa1211150 | Msa1211310 | 0.895369 | 1.022929e-75 | -8.615850e-47 |
| Msa1211310 | Msa1259580 | 0.866765 | 2.244974e-65 | -8.615850e-47 |
| Msa1211310 | Msa1259590 | 0.843909 | 1.048240e-58 | -8.615850e-47 |
| Msa1211310 | Msa1299300 | 0.861013 | 1.382552e-63 | -8.615850e-47 |
| Msa0932780 | Msa1211310 | 0.814090 | 1.838672e-51 | -8.615850e-47 |
| Msa0970570 | Msa1211310 | 0.818375 | 2.026051e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1211310 | MtrunA17_Chr4g0059871 | 92.708 | 480 | 25 | 4 | 1 | 477 | 1 | 473 | 0.0 | 576 |
| Msa1211310 | MtrunA17_Chr4g0059861 | 89.764 | 127 | 13 | 0 | 1 | 127 | 1 | 127 | 2.95e-71 | 235 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1211310 | AT5G62640.1 | 69.748 | 119 | 33 | 2 | 3 | 119 | 2 | 119 | 1.84e-48 | 174 |
| Msa1211310 | AT5G62640.2 | 69.748 | 119 | 33 | 2 | 3 | 119 | 2 | 119 | 2.11e-48 | 174 |
| Msa1211310 | AT5G62640.3 | 55.556 | 144 | 31 | 4 | 3 | 119 | 2 | 139 | 6.51e-39 | 148 |
Find 205 sgRNAs with CRISPR-Local
Find 460 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGTTGTCGTTCAAAGATTT+TGG | 0.199739 | 8_1:-70884035 | Msa1211310:three_prime_UTR |
| TCATCAATGCTTGGTGCTTT+TGG | 0.211601 | 8_1:+70884144 | None:intergenic |
| TGGTCCTCCTCCAAACTTTC+AGG | 0.212678 | 8_1:-70884896 | Msa1211310:CDS |
| CGATTTACAGCTTGCTCTTT+AGG | 0.216103 | 8_1:+70886101 | None:intergenic |
| TCCACTACGAACATCTTTAA+TGG | 0.239665 | 8_1:-70883882 | Msa1211310:three_prime_UTR |
| GGCACCGCAGCAGCGGGATT+TGG | 0.249689 | 8_1:+70886173 | None:intergenic |
| CTGCTTCTACTGTTGTTAAA+AGG | 0.257420 | 8_1:-70884816 | Msa1211310:CDS |
| TTTAGGGGTGGAGGAGGAGG+AGG | 0.261669 | 8_1:+70886068 | None:intergenic |
| GATGACGAGCTCACTGATTC+TGG | 0.281785 | 8_1:+70884171 | None:intergenic |
| CTCATACACAGCTTTCTTAG+AGG | 0.305527 | 8_1:-70884121 | Msa1211310:CDS |
| TGTCTTTGGAGCAGTCATTT+GGG | 0.311708 | 8_1:-70886332 | Msa1211310:intron |
| TCGAAAGGAGCTTCGCAAAA+AGG | 0.318695 | 8_1:-70889105 | Msa1211310:CDS |
| TCTGCACTTGTTCTCCTTTG+AGG | 0.322456 | 8_1:+70886305 | None:intergenic |
| TGATCCTCTTCCTGAAAGTT+TGG | 0.326618 | 8_1:+70884886 | None:intergenic |
| GAGATCCAAGAAATGGTTCC+TGG | 0.329177 | 8_1:-70885174 | Msa1211310:CDS |
| ATTGATTACCGGTAATCCTT+TGG | 0.332307 | 8_1:-70883917 | Msa1211310:three_prime_UTR |
| AGTCGTATGCCACCAAATTC+TGG | 0.333649 | 8_1:-70885246 | Msa1211310:CDS |
| AGGGGTGGAGGAGGAGGAGG+GGG | 0.333692 | 8_1:+70886071 | None:intergenic |
| GACTGAATAGCACCAGAATT+TGG | 0.338105 | 8_1:+70885234 | None:intergenic |
| TTACCTGTGACTGGACTTCC+TGG | 0.341623 | 8_1:-70885018 | Msa1211310:CDS |
| GGATTTGGAGGCAAGGGAGG+TGG | 0.343938 | 8_1:+70886188 | None:intergenic |
| CAAGAAGCAGATTGAGAACT+TGG | 0.347026 | 8_1:-70888808 | Msa1211310:CDS |
| GGCCTCATATCAGGTGGTGG+TGG | 0.348897 | 8_1:+70885045 | None:intergenic |
| ATGTCTTTGGAGCAGTCATT+TGG | 0.352853 | 8_1:-70886333 | Msa1211310:intron |
| GGCCCAGGTGGAGGACCATA+TGG | 0.355526 | 8_1:+70884949 | None:intergenic |
| GCCTCATATCAGGTGGTGGT+GGG | 0.358703 | 8_1:+70885046 | None:intergenic |
| TTTGGAGGCAAGGGAGGTGG+GGG | 0.363581 | 8_1:+70886191 | None:intergenic |
| ATCTGCTTCTTGAGTTGATC+AGG | 0.363974 | 8_1:+70888819 | None:intergenic |
| TTGATTACCGGTAATCCTTT+GGG | 0.365179 | 8_1:-70883916 | Msa1211310:three_prime_UTR |
| GAGGCCCAGGAACCATTTCT+TGG | 0.374733 | 8_1:+70885169 | None:intergenic |
| GGTGGTGGCGGCAAAGGAGG+TGG | 0.375758 | 8_1:+70886137 | None:intergenic |
| TCCTTGGAAGATAGATTATC+TGG | 0.379238 | 8_1:+70885984 | None:intergenic |
| CTCATATCAGGTGGTGGTGG+GGG | 0.384957 | 8_1:+70885048 | None:intergenic |
| ACTGTTGACACAGGTGGTTT+TGG | 0.390044 | 8_1:+70884249 | None:intergenic |
| GTTCATCACCTTACCGCCTT+TGG | 0.391843 | 8_1:+70889142 | None:intergenic |
| AATACATCAGGCTGTAAACT+TGG | 0.391873 | 8_1:+70885099 | None:intergenic |
| GGTAATGGAGGCCTCATATC+AGG | 0.395163 | 8_1:+70885036 | None:intergenic |
| AGAAAGAAGGTGAGGGATGT+GGG | 0.397715 | 8_1:-70888858 | Msa1211310:CDS |
| CCAGGAGGTGGTGGCGGCAA+AGG | 0.398079 | 8_1:+70886131 | None:intergenic |
| GGTTGTTGTCTTGGAGGAGG+AGG | 0.398352 | 8_1:+70885147 | None:intergenic |
| CCTGGTCAGGCACCTCCTCC+TGG | 0.399606 | 8_1:-70885000 | Msa1211310:CDS |
| GAACCATTTCTTGGATCTCC+TGG | 0.400108 | 8_1:+70885178 | None:intergenic |
| ATTTGGAGGCAAGGGAGGTG+GGG | 0.400168 | 8_1:+70886190 | None:intergenic |
| ATTTCTCTCTTCGCCTTCAC+TGG | 0.402378 | 8_1:+70886019 | None:intergenic |
| AAGAAAGAAGGTGAGGGATG+TGG | 0.403157 | 8_1:-70888859 | Msa1211310:CDS |
| TCTGGAGTGTGCTGAGCTAA+TGG | 0.405498 | 8_1:+70884793 | None:intergenic |
| GGACAAGGAGGTTGTTGTCT+TGG | 0.405852 | 8_1:+70885138 | None:intergenic |
| TGATTAGCTAAATTGATTAC+CGG | 0.407341 | 8_1:-70883928 | Msa1211310:three_prime_UTR |
| TTAGGGGTGGAGGAGGAGGA+GGG | 0.408804 | 8_1:+70886069 | None:intergenic |
| AAATCCCTTGGCGCACTTGA+TGG | 0.410707 | 8_1:-70884093 | Msa1211310:CDS |
| GCAGCAGATTTAACATATGA+TGG | 0.412978 | 8_1:+70884835 | None:intergenic |
| CTTGGTGGAGGAGGCGGCGG+AGG | 0.416574 | 8_1:+70885267 | None:intergenic |
| CACTCCAGAACTCACATCTA+TGG | 0.418941 | 8_1:-70884779 | Msa1211310:intron |
| CTTACCATAGATGTGAGTTC+TGG | 0.420790 | 8_1:+70884775 | None:intergenic |
| CTCATCATTGGAGGAGGCCC+AGG | 0.423053 | 8_1:+70884934 | None:intergenic |
| TGTTGTCTTGGAGGAGGAGG+AGG | 0.426012 | 8_1:+70885150 | None:intergenic |
| TCAAATGCCCAAAGGATTAC+CGG | 0.426082 | 8_1:+70883909 | None:intergenic |
| CTAAAGAGCAAGCTGTAAAT+CGG | 0.431062 | 8_1:-70886100 | Msa1211310:CDS |
| CTGCATCTGTGCGGGTGAGA+AGG | 0.432711 | 8_1:-70884296 | Msa1211310:CDS |
| GCATCAGGAAGTGGTGGTGG+TGG | 0.434177 | 8_1:+70886260 | None:intergenic |
| TAGGGGTGGAGGAGGAGGAG+GGG | 0.434506 | 8_1:+70886070 | None:intergenic |
| CCCCACCACCACCTGATATG+AGG | 0.436179 | 8_1:-70885047 | Msa1211310:CDS |
| GGAAGTCCAGTCACAGGTAA+TGG | 0.439531 | 8_1:+70885021 | None:intergenic |
| CTTTCAGGAAGAGGATCATA+TGG | 0.439842 | 8_1:-70884881 | Msa1211310:CDS |
| GCCCAGGTGGAGGACCATAT+GGG | 0.444020 | 8_1:+70884950 | None:intergenic |
| TCTTCGCCTTCACTGGTGCC+AGG | 0.447800 | 8_1:+70886026 | None:intergenic |
| AATCGTGAAACATGTGTCAA+TGG | 0.447873 | 8_1:-70883956 | Msa1211310:three_prime_UTR |
| CCTTCACTGGTGCCAGGTGG+AGG | 0.449595 | 8_1:+70886032 | None:intergenic |
| GGAAGTGGTGGTCTCATCAT+TGG | 0.450117 | 8_1:+70884922 | None:intergenic |
| GGAGGACCAGGAGGTGGTGG+CGG | 0.453518 | 8_1:+70886125 | None:intergenic |
| ATCTTCCAAGGAGCCTGGTC+AGG | 0.453723 | 8_1:-70885973 | Msa1211310:intron |
| TCAGGAAGTGGTGGTGGTGG+GGG | 0.456170 | 8_1:+70886263 | None:intergenic |
| ACCGCAGCAGCGGGATTTGG+AGG | 0.457590 | 8_1:+70886176 | None:intergenic |
| GGCACCTCCTCCTGGAATGA+TGG | 0.457937 | 8_1:-70884992 | Msa1211310:CDS |
| CCTTTGCCGCCACCACCTCC+TGG | 0.462646 | 8_1:-70886131 | Msa1211310:CDS |
| CCTCATATCAGGTGGTGGTG+GGG | 0.464945 | 8_1:+70885047 | None:intergenic |
| GGCATACGACTTGGTGGAGG+AGG | 0.466835 | 8_1:+70885258 | None:intergenic |
| GCCTACCTGACCAGGCTCCT+TGG | 0.466933 | 8_1:+70885968 | None:intergenic |
| GGTGGAGGACCAGGAGGTGG+TGG | 0.469883 | 8_1:+70886122 | None:intergenic |
| GGAGGCAGTGGCAAAGATGC+AGG | 0.471761 | 8_1:+70886212 | None:intergenic |
| TTAGGTGGAGGACCAGGAGG+TGG | 0.473869 | 8_1:+70886119 | None:intergenic |
| GATTTGGAGGCAAGGGAGGT+GGG | 0.474522 | 8_1:+70886189 | None:intergenic |
| TGCTCTTTAGGTGGAGGACC+AGG | 0.474543 | 8_1:+70886113 | None:intergenic |
| CTTCTCACCCGCACAGATGC+AGG | 0.476908 | 8_1:+70884297 | None:intergenic |
| CTAGGTTCCTGCATCTGTGC+GGG | 0.477960 | 8_1:-70884304 | Msa1211310:intron |
| CAGTCTCAGCCGCCTCCACC+TGG | 0.478625 | 8_1:-70886044 | Msa1211310:CDS |
| CGACTTGGTGGAGGAGGCGG+CGG | 0.481431 | 8_1:+70885264 | None:intergenic |
| TCCTCCAAACTTTCAGGAAG+AGG | 0.483764 | 8_1:-70884890 | Msa1211310:CDS |
| GGAGGTGGTGGTAATGATAC+AGG | 0.484282 | 8_1:+70886152 | None:intergenic |
| GCCTCCAAATCCCGCTGCTG+CGG | 0.484438 | 8_1:-70886177 | Msa1211310:CDS |
| TATGATGGTTTCTGAGGAAG+TGG | 0.485438 | 8_1:+70884850 | None:intergenic |
| CTTTAATGGATGAACTAAAG+TGG | 0.488401 | 8_1:-70883868 | Msa1211310:three_prime_UTR |
| CAAGGAGGTTGTTGTCTTGG+AGG | 0.489583 | 8_1:+70885141 | None:intergenic |
| TGAAAGTTTGGAGGAGGACC+AGG | 0.490881 | 8_1:+70884898 | None:intergenic |
| TCCTCTTCCTGAAAGTTTGG+AGG | 0.490909 | 8_1:+70884889 | None:intergenic |
| GGAGGAGGACCAGGTGGAAG+TGG | 0.492353 | 8_1:+70884907 | None:intergenic |
| ATACGACTTGGTGGAGGAGG+CGG | 0.492519 | 8_1:+70885261 | None:intergenic |
| AAACCAGGAGATCCAAGAAA+TGG | 0.493307 | 8_1:-70885181 | Msa1211310:CDS |
| CATCAGGAAGTGGTGGTGGT+GGG | 0.493433 | 8_1:+70886261 | None:intergenic |
| TTAGAGGACATGAAATCCCT+TGG | 0.494691 | 8_1:-70884105 | Msa1211310:CDS |
| ATAGTTGGCCCGAGTGTCAC+AGG | 0.497969 | 8_1:+70884201 | None:intergenic |
| ATCAGGAAGTGGTGGTGGTG+GGG | 0.498401 | 8_1:+70886262 | None:intergenic |
| CTTGGAGGAGGAGGAGGCCC+AGG | 0.501418 | 8_1:+70885156 | None:intergenic |
| GGAGGTGGTGGCGGCAAAGG+AGG | 0.502570 | 8_1:+70886134 | None:intergenic |
| CCAGGAGGAGGTGCCTGACC+AGG | 0.503405 | 8_1:+70885000 | None:intergenic |
| ATCGTGAAACATGTGTCAAT+GGG | 0.504790 | 8_1:-70883955 | Msa1211310:three_prime_UTR |
| CCCCATATGGTCCTCCACCT+GGG | 0.506318 | 8_1:-70884951 | Msa1211310:CDS |
| ATTGGAGGAGGCCCAGGTGG+AGG | 0.506698 | 8_1:+70884940 | None:intergenic |
| TGTGACTGGACTTCCTGGTC+AGG | 0.512104 | 8_1:-70885013 | Msa1211310:CDS |
| TGATGAGAAAAGGCGGGAGA+AGG | 0.516031 | 8_1:-70886443 | Msa1211310:CDS |
| GGTGGCGGCAAAGGAGGTGG+TGG | 0.516548 | 8_1:+70886140 | None:intergenic |
| GAATTTGGTGGCATACGACT+TGG | 0.516978 | 8_1:+70885249 | None:intergenic |
| GGTGGGAATCGAGATATTCC+AGG | 0.517549 | 8_1:+70885072 | None:intergenic |
| GATACAGGCACCGCAGCAGC+GGG | 0.519764 | 8_1:+70886167 | None:intergenic |
| AGGCCTCCATTACCTGTGAC+TGG | 0.519780 | 8_1:-70885027 | Msa1211310:CDS |
| CTTGGGATTAATGAGGGTCC+TGG | 0.520058 | 8_1:+70885117 | None:intergenic |
| ACAGCTTGCTCTTTAGGTGG+AGG | 0.520491 | 8_1:+70886107 | None:intergenic |
| TGCATCTGTGCGGGTGAGAA+GGG | 0.520543 | 8_1:-70884295 | Msa1211310:CDS |
| GACAGGAACATGATGAGAAA+AGG | 0.521466 | 8_1:-70886453 | Msa1211310:intron |
| CCTCCACCTGGCACCAGTGA+AGG | 0.527423 | 8_1:-70886032 | Msa1211310:CDS |
| CCCAGGTGGAGGACCATATG+GGG | 0.528745 | 8_1:+70884951 | None:intergenic |
| TCACTGGTGCCAGGTGGAGG+CGG | 0.529110 | 8_1:+70886035 | None:intergenic |
| GCTGAACTAGCATCAGGAAG+TGG | 0.529995 | 8_1:+70886251 | None:intergenic |
| GATGAGAAAAGGCGGGAGAA+GGG | 0.530329 | 8_1:-70886442 | Msa1211310:CDS |
| GTCATTTGGGGCTTCCTCAA+AGG | 0.539043 | 8_1:-70886319 | Msa1211310:CDS |
| TTTACAGCTTGCTCTTTAGG+TGG | 0.539205 | 8_1:+70886104 | None:intergenic |
| AATCTATCTTCCAAGGAGCC+TGG | 0.539750 | 8_1:-70885978 | Msa1211310:CDS |
| CCATCAGCTGAACTAGCATC+AGG | 0.540810 | 8_1:+70886245 | None:intergenic |
| TTTGTTGTGGCAGAGGCTGA+TGG | 0.541664 | 8_1:-70887895 | Msa1211310:intron |
| AGCAGCGGGATTTGGAGGCA+AGG | 0.541849 | 8_1:+70886181 | None:intergenic |
| ATTAATGAGGGTCCTGGACA+AGG | 0.542446 | 8_1:+70885123 | None:intergenic |
| GTCTTTGGAGCAGTCATTTG+GGG | 0.545250 | 8_1:-70886331 | Msa1211310:intron |
| TCTGGTGCTATTCAGTCTGA+TGG | 0.547671 | 8_1:-70885228 | Msa1211310:CDS |
| GGAGGACCAGGTGGAAGTGG+TGG | 0.548278 | 8_1:+70884910 | None:intergenic |
| TTTGGTGGCATACGACTTGG+TGG | 0.551552 | 8_1:+70885252 | None:intergenic |
| TCTTCCTGAAAGTTTGGAGG+AGG | 0.551854 | 8_1:+70884892 | None:intergenic |
| GGAGGTTGTTGTCTTGGAGG+AGG | 0.552576 | 8_1:+70885144 | None:intergenic |
| AGAACAGTCCCTGTGACACT+CGG | 0.554265 | 8_1:-70884210 | Msa1211310:CDS |
| TTTAATGGATGAACTAAAGT+GGG | 0.555675 | 8_1:-70883867 | Msa1211310:three_prime_UTR |
| CTGTAAACTTGGGATTAATG+AGG | 0.555892 | 8_1:+70885110 | None:intergenic |
| ATCTATCCACAAGGTTTCTG+TGG | 0.559383 | 8_1:+70883979 | None:intergenic |
| TTAACATATGATGGTTTCTG+AGG | 0.559870 | 8_1:+70884844 | None:intergenic |
| TTTGTGGGGTCAAATTGTCA+TGG | 0.560619 | 8_1:-70883829 | Msa1211310:three_prime_UTR |
| GCGGGATTTGGAGGCAAGGG+AGG | 0.560930 | 8_1:+70886185 | None:intergenic |
| GGGACCATCATTCCAGGAGG+AGG | 0.562381 | 8_1:+70884988 | None:intergenic |
| AGACAACAACCTCCTTGTCC+AGG | 0.563064 | 8_1:-70885135 | Msa1211310:CDS |
| TTTAAGAGATTAGCAAAATG+GGG | 0.565009 | 8_1:-70884003 | Msa1211310:three_prime_UTR |
| TCCATTAAAGATGTTCGTAG+TGG | 0.565775 | 8_1:+70883881 | None:intergenic |
| TCCTTTCGATAAGCATCGGT+AGG | 0.569880 | 8_1:+70889119 | None:intergenic |
| GCAGCGGGATTTGGAGGCAA+GGG | 0.573293 | 8_1:+70886182 | None:intergenic |
| TGATACAGGCACCGCAGCAG+CGG | 0.575550 | 8_1:+70886166 | None:intergenic |
| GCCAGATAATCTATCTTCCA+AGG | 0.576178 | 8_1:-70885985 | Msa1211310:CDS |
| AGATCCAAGAAATGGTTCCT+GGG | 0.576940 | 8_1:-70885173 | Msa1211310:CDS |
| GGCAGAGGCTGATGGTGCAT+TGG | 0.578834 | 8_1:-70887887 | Msa1211310:intron |
| TCAACCATCAAGTGCGCCAA+GGG | 0.581937 | 8_1:+70884089 | None:intergenic |
| CCCTACCGATGCTTATCGAA+AGG | 0.583184 | 8_1:-70889120 | Msa1211310:CDS |
| CTCAACCATCAAGTGCGCCA+AGG | 0.583558 | 8_1:+70884088 | None:intergenic |
| GAAGACGACCAAAGGCGGTA+AGG | 0.583594 | 8_1:-70889150 | Msa1211310:CDS |
| ATACATCAGGCTGTAAACTT+GGG | 0.584941 | 8_1:+70885100 | None:intergenic |
| GGTGGCATACGACTTGGTGG+AGG | 0.584968 | 8_1:+70885255 | None:intergenic |
| AAAAGAAAGAAAGAAGGTGA+GGG | 0.585531 | 8_1:-70888865 | Msa1211310:CDS |
| GGTGGTCTCATCATTGGAGG+AGG | 0.586166 | 8_1:+70884928 | None:intergenic |
| GAAAGAAGGTGAGGGATGTG+GGG | 0.589038 | 8_1:-70888857 | Msa1211310:CDS |
| AGTGGTGGTCTCATCATTGG+AGG | 0.590662 | 8_1:+70884925 | None:intergenic |
| ATCATTGGAGGAGGCCCAGG+TGG | 0.592389 | 8_1:+70884937 | None:intergenic |
| GGAACATGATGAGAAAAGGC+GGG | 0.595501 | 8_1:-70886449 | Msa1211310:CDS |
| CCTGATGCTAGTTCAGCTGA+TGG | 0.595837 | 8_1:-70886245 | Msa1211310:CDS |
| GGAGGCCTCATATCAGGTGG+TGG | 0.598817 | 8_1:+70885042 | None:intergenic |
| CTAGCATCAGGAAGTGGTGG+TGG | 0.603135 | 8_1:+70886257 | None:intergenic |
| TGTAAACTTGGGATTAATGA+GGG | 0.605133 | 8_1:+70885111 | None:intergenic |
| CCTTTCGATAAGCATCGGTA+GGG | 0.605420 | 8_1:+70889120 | None:intergenic |
| GAACAGTCCCTGTGACACTC+GGG | 0.605709 | 8_1:-70884209 | Msa1211310:CDS |
| ATGAGACCACCACTTCCACC+TGG | 0.606838 | 8_1:-70884916 | Msa1211310:CDS |
| TGACCAGGAAGTCCAGTCAC+AGG | 0.609340 | 8_1:+70885015 | None:intergenic |
| ACTAGGTTCCTGCATCTGTG+CGG | 0.610057 | 8_1:-70884305 | Msa1211310:intron |
| TCAATGACGAAGACGACCAA+AGG | 0.615621 | 8_1:-70889158 | Msa1211310:CDS |
| TTAAGAGATTAGCAAAATGG+GGG | 0.617687 | 8_1:-70884002 | Msa1211310:three_prime_UTR |
| TCTTGTCATTAAGAAGCAGA+AGG | 0.618323 | 8_1:-70887818 | Msa1211310:intron |
| TTCACGATTATCTATCCACA+AGG | 0.621106 | 8_1:+70883970 | None:intergenic |
| GTTGAGATCACTGTGAGTGG+TGG | 0.623794 | 8_1:-70884071 | Msa1211310:exon |
| TCTTTAGGTGGAGGACCAGG+AGG | 0.623946 | 8_1:+70886116 | None:intergenic |
| ATGACGAAGACGACCAAAGG+CGG | 0.624279 | 8_1:-70889155 | Msa1211310:CDS |
| TGAATAGCACCAGAATTTGG+TGG | 0.624865 | 8_1:+70885237 | None:intergenic |
| AGGAACATGATGAGAAAAGG+CGG | 0.626419 | 8_1:-70886450 | Msa1211310:CDS |
| TAAGAACTCTTATGCAAACC+AGG | 0.627646 | 8_1:-70885196 | Msa1211310:CDS |
| TCGCCTTCACTGGTGCCAGG+TGG | 0.629646 | 8_1:+70886029 | None:intergenic |
| GAACTAGCATCAGGAAGTGG+TGG | 0.632653 | 8_1:+70886254 | None:intergenic |
| AAGCTCCTTTCGATAAGCAT+CGG | 0.633489 | 8_1:+70889115 | None:intergenic |
| GTGGGGTCAAATTGTCATGG+AGG | 0.634836 | 8_1:-70883826 | Msa1211310:three_prime_UTR |
| GTGTATGAGTCATCAATGCT+TGG | 0.640196 | 8_1:+70884135 | None:intergenic |
| CCAGGTGGAGGACCATATGG+GGG | 0.641485 | 8_1:+70884952 | None:intergenic |
| AGTCCAGTCACAGGTAATGG+AGG | 0.651630 | 8_1:+70885024 | None:intergenic |
| ATGGTTGAGATCACTGTGAG+TGG | 0.655860 | 8_1:-70884074 | Msa1211310:exon |
| GTGGGAATCGAGATATTCCA+GGG | 0.662179 | 8_1:+70885073 | None:intergenic |
| TGGATTGATCAAATGCCCAA+AGG | 0.662369 | 8_1:+70883901 | None:intergenic |
| GACACTGACACTGTTGACAC+AGG | 0.662733 | 8_1:+70884240 | None:intergenic |
| AAGTTTGGAGGAGGACCAGG+TGG | 0.669156 | 8_1:+70884901 | None:intergenic |
| TAGTTGGCCCGAGTGTCACA+GGG | 0.676300 | 8_1:+70884202 | None:intergenic |
| TTTGAACGACAACGACTGAG+AGG | 0.679544 | 8_1:+70884043 | None:intergenic |
| AATGGAGGCCTCATATCAGG+TGG | 0.683051 | 8_1:+70885039 | None:intergenic |
| AATGAGGGTCCTGGACAAGG+AGG | 0.685690 | 8_1:+70885126 | None:intergenic |
| TTTCACCTGAACATAACAGG+GGG | 0.688198 | 8_1:+70886415 | None:intergenic |
| ACTGACACTGTTGACACAGG+TGG | 0.689341 | 8_1:+70884243 | None:intergenic |
| TGGGAATCGAGATATTCCAG+GGG | 0.767776 | 8_1:+70885074 | None:intergenic |
| GGGAATCGAGATATTCCAGG+GGG | 0.784831 | 8_1:+70885075 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATATTTTTATTTAGCAA+AGG | - | chr8_1:70886251-70886270 | Msa1211310:CDS | 10.0% |
| !! | TTTATATGTCATAAACATTA+AGG | + | chr8_1:70885406-70885425 | None:intergenic | 15.0% |
| !! | TTCAATATATCTATAATTTC+AGG | + | chr8_1:70886946-70886965 | None:intergenic | 15.0% |
| !! | ATAAAAAATATAAAACACGT+GGG | + | chr8_1:70889089-70889108 | None:intergenic | 15.0% |
| !! | AATAAAAAATATAAAACACG+TGG | + | chr8_1:70889090-70889109 | None:intergenic | 15.0% |
| !! | TGAATTTCAATTATGCTAAT+AGG | - | chr8_1:70883815-70883834 | Msa1211310:three_prime_UTR | 20.0% |
| !! | GAATTTCAATTATGCTAATA+GGG | - | chr8_1:70883816-70883835 | Msa1211310:three_prime_UTR | 20.0% |
| !! | GAATAAAAAAGAAAGAAAGA+AGG | - | chr8_1:70883949-70883968 | Msa1211310:three_prime_UTR | 20.0% |
| !! | AACTGATAATATGAAGTAAA+AGG | + | chr8_1:70884236-70884255 | None:intergenic | 20.0% |
| !! | AAAAATCTGCAAAATTATGT+AGG | + | chr8_1:70885072-70885091 | None:intergenic | 20.0% |
| !!! | TGTTACGATACATTTTTTTT+TGG | - | chr8_1:70885343-70885362 | Msa1211310:intron | 20.0% |
| !! | TATTGAAACAAACTTGTAAT+GGG | - | chr8_1:70886068-70886087 | Msa1211310:CDS | 20.0% |
| !!! | TCATTTTTAGTTAAATGACT+TGG | - | chr8_1:70886875-70886894 | Msa1211310:intron | 20.0% |
| !!! | CATTTTTAGTTAAATGACTT+GGG | - | chr8_1:70886876-70886895 | Msa1211310:intron | 20.0% |
| !! | ATAGAACATTTAAATGTCTT+TGG | + | chr8_1:70887170-70887189 | None:intergenic | 20.0% |
| !! | AGACATTTAAATGTTCTATT+AGG | - | chr8_1:70887171-70887190 | Msa1211310:intron | 20.0% |
| !! | TGTTTAAAAACACTGAAAAT+TGG | + | chr8_1:70887247-70887266 | None:intergenic | 20.0% |
| !! | AACATTTCAAATTATGTTCA+AGG | - | chr8_1:70887263-70887282 | Msa1211310:intron | 20.0% |
| !! | ATACTTAACAAAAGTTTCTT+CGG | - | chr8_1:70887492-70887511 | Msa1211310:intron | 20.0% |
| !! | ACTAAATGTGTACTTAATAT+AGG | + | chr8_1:70888142-70888161 | None:intergenic | 20.0% |
| !! | TTTGCTAATCTCTTAAAAAA+AGG | + | chr8_1:70888814-70888833 | None:intergenic | 20.0% |
| !!! | TTTTTAAGAGATTAGCAAAA+TGG | - | chr8_1:70888815-70888834 | Msa1211310:CDS | 20.0% |
| !!! | TTTTAAGAGATTAGCAAAAT+GGG | - | chr8_1:70888816-70888835 | Msa1211310:CDS | 20.0% |
| !!! | TAAACCAAGTTATTTTTTGT+GGG | - | chr8_1:70888976-70888995 | Msa1211310:intron | 20.0% |
| !!! | ACATTTTTGCTTTGTTGTTT+TGG | - | chr8_1:70883920-70883939 | Msa1211310:three_prime_UTR | 25.0% |
| ! | GTAAAAGGTTGCAAAATAAA+TGG | + | chr8_1:70884221-70884240 | None:intergenic | 25.0% |
| ! | TCAGATTAAATTAGAAGACT+AGG | - | chr8_1:70884257-70884276 | Msa1211310:CDS | 25.0% |
| !!! | GATTTACAATCCTCTAAAAT+TGG | + | chr8_1:70884587-70884606 | None:intergenic | 25.0% |
| ! | AATATACTATACACTACAAC+TGG | - | chr8_1:70884683-70884702 | Msa1211310:intron | 25.0% |
| !! | TTTTATTCCAAAATGTGGTA+TGG | - | chr8_1:70884780-70884799 | Msa1211310:CDS | 25.0% |
| !! | TTCATACATGTCTATTTTGT+TGG | - | chr8_1:70885031-70885050 | Msa1211310:CDS | 25.0% |
| !! | TCATACATGTCTATTTTGTT+GGG | - | chr8_1:70885032-70885051 | Msa1211310:CDS | 25.0% |
| ! | CTCTAAGTAATACTTATCTA+TGG | + | chr8_1:70885495-70885514 | None:intergenic | 25.0% |
| ! | TTATCAGTGATGTTAAATAG+TGG | - | chr8_1:70885561-70885580 | Msa1211310:intron | 25.0% |
| !!! | TAGTGTTGTTGATATTTTCT+TGG | - | chr8_1:70885995-70886014 | Msa1211310:CDS | 25.0% |
| ! | CTATTGAAACAAACTTGTAA+TGG | - | chr8_1:70886067-70886086 | Msa1211310:CDS | 25.0% |
| ! | ACATTTAAGTCTTGATTGAT+TGG | - | chr8_1:70886138-70886157 | Msa1211310:CDS | 25.0% |
| !! | AAGGAAAAACCAGAATTTTA+TGG | - | chr8_1:70886164-70886183 | Msa1211310:CDS | 25.0% |
| ! | ACTCTAATTCCATAAAATTC+TGG | + | chr8_1:70886176-70886195 | None:intergenic | 25.0% |
| ! | AAAATATAAATGCACAACAC+AGG | + | chr8_1:70886241-70886260 | None:intergenic | 25.0% |
| ! | TAAACAACACAAAAACAAAC+TGG | + | chr8_1:70886456-70886475 | None:intergenic | 25.0% |
| !! | TTGTCTATTTCTTTATGTGT+TGG | - | chr8_1:70887209-70887228 | Msa1211310:intron | 25.0% |
| ! | TGTGTACTTAATATAGGTAT+GGG | + | chr8_1:70888136-70888155 | None:intergenic | 25.0% |
| ! | ATGTGTACTTAATATAGGTA+TGG | + | chr8_1:70888137-70888156 | None:intergenic | 25.0% |
| ! | TATTTAACTGAGACATTACT+CGG | + | chr8_1:70888382-70888401 | None:intergenic | 25.0% |
| ! | TAATTGCTCTAATATAGTCT+GGG | - | chr8_1:70888481-70888500 | Msa1211310:intron | 25.0% |
| ! | TTTAAGAGATTAGCAAAATG+GGG | - | chr8_1:70888817-70888836 | Msa1211310:CDS | 25.0% |
| !! | TGATTAGCTAAATTGATTAC+CGG | - | chr8_1:70888892-70888911 | Msa1211310:intron | 25.0% |
| !! | TTTAATGGATGAACTAAAGT+GGG | - | chr8_1:70888953-70888972 | Msa1211310:intron | 25.0% |
| !!! | GTAAACCAAGTTATTTTTTG+TGG | - | chr8_1:70888975-70888994 | Msa1211310:intron | 25.0% |
| !!! | AAACCAAGTTATTTTTTGTG+GGG | - | chr8_1:70888977-70888996 | Msa1211310:intron | 25.0% |
| TTCGCAAAAAGGAATTGAAA+AGG | - | chr8_1:70883726-70883745 | Msa1211310:three_prime_UTR | 30.0% | |
| TCGCAAAAAGGAATTGAAAA+GGG | - | chr8_1:70883727-70883746 | Msa1211310:three_prime_UTR | 30.0% | |
| TCAGTGATTAAGTCAGTATT+TGG | + | chr8_1:70883882-70883901 | None:intergenic | 30.0% | |
| AAAAAGAAAGAAAGAAGGTG+AGG | - | chr8_1:70883954-70883973 | Msa1211310:three_prime_UTR | 30.0% | |
| AAAAGAAAGAAAGAAGGTGA+GGG | - | chr8_1:70883955-70883974 | Msa1211310:three_prime_UTR | 30.0% | |
| ! | GATGGTGATGTAAAAAAACA+AGG | + | chr8_1:70884110-70884129 | None:intergenic | 30.0% |
| CCATTATTCTCTAAACAAGA+TGG | + | chr8_1:70884152-70884171 | None:intergenic | 30.0% | |
| ! | CCATCTTGTTTAGAGAATAA+TGG | - | chr8_1:70884149-70884168 | Msa1211310:CDS | 30.0% |
| ! | AAAACTAATTTGCAAACAGC+AGG | - | chr8_1:70884526-70884545 | Msa1211310:intron | 30.0% |
| AATCAAATATAGAACTGCCT+AGG | - | chr8_1:70884561-70884580 | Msa1211310:intron | 30.0% | |
| TTGGAATAAAAGTGGAATAC+TGG | + | chr8_1:70884771-70884790 | None:intergenic | 30.0% | |
| !! | TCCACTTTTATTCCAAAATG+TGG | - | chr8_1:70884775-70884794 | Msa1211310:intron | 30.0% |
| !!! | ACCACATTTTGGAATAAAAG+TGG | + | chr8_1:70884779-70884798 | None:intergenic | 30.0% |
| TTATGTAGGAGAATACAAAG+TGG | + | chr8_1:70885058-70885077 | None:intergenic | 30.0% | |
| GTATATCCTTTACTTCTTCA+GGG | + | chr8_1:70885279-70885298 | None:intergenic | 30.0% | |
| AGTATATCCTTTACTTCTTC+AGG | + | chr8_1:70885280-70885299 | None:intergenic | 30.0% | |
| TGAAGAAGTAAAGGATATAC+TGG | - | chr8_1:70885279-70885298 | Msa1211310:CDS | 30.0% | |
| ACTGATAAACTACCAATTAG+AGG | + | chr8_1:70885549-70885568 | None:intergenic | 30.0% | |
| TATGGCCAATTTATGAAGAA+AGG | - | chr8_1:70885622-70885641 | Msa1211310:intron | 30.0% | |
| !!! | GCCTTAAAATGACAGTTTTT+TGG | - | chr8_1:70885676-70885695 | Msa1211310:intron | 30.0% |
| !!! | GCCAAAAAACTGTCATTTTA+AGG | + | chr8_1:70885680-70885699 | None:intergenic | 30.0% |
| GCAGTATTATCAATTGCAAA+AGG | + | chr8_1:70885702-70885721 | None:intergenic | 30.0% | |
| CAGATTATGATAAACCCAAT+AGG | + | chr8_1:70885968-70885987 | None:intergenic | 30.0% | |
| GGTTTATCATAATCTGTATG+TGG | - | chr8_1:70885972-70885991 | Msa1211310:intron | 30.0% | |
| TGTTCACCAAAAAATTCCAT+GGG | + | chr8_1:70886121-70886140 | None:intergenic | 30.0% | |
| ATGTTCACCAAAAAATTCCA+TGG | + | chr8_1:70886122-70886141 | None:intergenic | 30.0% | |
| AGTCTTGATTGATTGGTAAA+AGG | - | chr8_1:70886145-70886164 | Msa1211310:CDS | 30.0% | |
| TCAAATTCAAAGGCTGAATT+TGG | + | chr8_1:70886280-70886299 | None:intergenic | 30.0% | |
| ! | ACTAGAGTGTTCAAATTCAA+AGG | + | chr8_1:70886290-70886309 | None:intergenic | 30.0% |
| TATCAGATTTAGGTCATCAA+TGG | + | chr8_1:70886340-70886359 | None:intergenic | 30.0% | |
| ! | GACCTAAATCTGATATCTTT+TGG | - | chr8_1:70886345-70886364 | Msa1211310:intron | 30.0% |
| GTCCAAAAGATATCAGATTT+AGG | + | chr8_1:70886350-70886369 | None:intergenic | 30.0% | |
| ! | AAATCTGATATCTTTTGGAC+AGG | - | chr8_1:70886350-70886369 | Msa1211310:intron | 30.0% |
| ! | TTTTTCACCTGAACATAACA+GGG | + | chr8_1:70886410-70886429 | None:intergenic | 30.0% |
| ! | ATTTTTCACCTGAACATAAC+AGG | + | chr8_1:70886411-70886430 | None:intergenic | 30.0% |
| !! | TTGTGTTGTTTACAAATCCT+TGG | - | chr8_1:70886464-70886483 | Msa1211310:intron | 30.0% |
| TCTGACTGTATAAGTATGAA+CGG | - | chr8_1:70886919-70886938 | Msa1211310:intron | 30.0% | |
| !!! | CGGCATTTTTTTTATCCAAA+AGG | - | chr8_1:70886991-70887010 | Msa1211310:intron | 30.0% |
| ! | CAAAATTTAGGATGTCAGTA+TGG | - | chr8_1:70887035-70887054 | Msa1211310:intron | 30.0% |
| CATATACAAGCAAGAGATAA+CGG | + | chr8_1:70887319-70887338 | None:intergenic | 30.0% | |
| AATGTAATGTGTTCCCATTT+GGG | + | chr8_1:70887434-70887453 | None:intergenic | 30.0% | |
| AAATGTAATGTGTTCCCATT+TGG | + | chr8_1:70887435-70887454 | None:intergenic | 30.0% | |
| ACATTACATTTGATTGCTCT+TGG | - | chr8_1:70887444-70887463 | Msa1211310:intron | 30.0% | |
| !!! | ATTTTTTCTCTCTGAAATGC+AGG | - | chr8_1:70887522-70887541 | Msa1211310:intron | 30.0% |
| TGTAAACTTGGGATTAATGA+GGG | + | chr8_1:70887712-70887731 | None:intergenic | 30.0% | |
| TTAACATATGATGGTTTCTG+AGG | + | chr8_1:70887979-70887998 | None:intergenic | 30.0% | |
| GTGTACTTAATATAGGTATG+GGG | + | chr8_1:70888135-70888154 | None:intergenic | 30.0% | |
| !! | GAAAAGTTGGCTTTAATTAG+TGG | - | chr8_1:70888328-70888347 | Msa1211310:intron | 30.0% |
| TGGTCATGAACAAACAATTT+AGG | + | chr8_1:70888418-70888437 | None:intergenic | 30.0% | |
| GTAATTGCTCTAATATAGTC+TGG | - | chr8_1:70888480-70888499 | Msa1211310:intron | 30.0% | |
| !!! | TCTGGGTCATTTTTTTTACT+AGG | - | chr8_1:70888498-70888517 | Msa1211310:intron | 30.0% |
| !!! | GATTCTGGTTTTACAATAGT+TGG | + | chr8_1:70888637-70888656 | None:intergenic | 30.0% |
| TTAAGAGATTAGCAAAATGG+GGG | - | chr8_1:70888818-70888837 | Msa1211310:CDS | 30.0% | |
| ! | CTTTAATGGATGAACTAAAG+TGG | - | chr8_1:70888952-70888971 | Msa1211310:intron | 30.0% |
| TTATACCAGCATAATGCTGA+TGG | + | chr8_1:70884128-70884147 | None:intergenic | 35.0% | |
| ATGTGACACATGTGAATAGT+TGG | - | chr8_1:70884312-70884331 | Msa1211310:intron | 35.0% | |
| !! | TTGGAAAGATAAGGTATTGC+AGG | + | chr8_1:70884363-70884382 | None:intergenic | 35.0% |
| !! | ATAAGCTGGTTTGATGGTTT+GGG | + | chr8_1:70884402-70884421 | None:intergenic | 35.0% |
| CATACATCTAGTAGTTGTCA+TGG | - | chr8_1:70884470-70884489 | Msa1211310:intron | 35.0% | |
| TATACACTACAACTGGAGAT+GGG | - | chr8_1:70884690-70884709 | Msa1211310:intron | 35.0% | |
| AAAAGTGGAATACTGGTGTA+GGG | + | chr8_1:70884764-70884783 | None:intergenic | 35.0% | |
| TAAAAGTGGAATACTGGTGT+AGG | + | chr8_1:70884765-70884784 | None:intergenic | 35.0% | |
| ! | GTTATGTCCATACCACATTT+TGG | + | chr8_1:70884790-70884809 | None:intergenic | 35.0% |
| GTATGGACATAACAATCCTT+TGG | - | chr8_1:70884797-70884816 | Msa1211310:CDS | 35.0% | |
| ATACTACTTAATGCATGCCA+GGG | + | chr8_1:70884829-70884848 | None:intergenic | 35.0% | |
| TATACTACTTAATGCATGCC+AGG | + | chr8_1:70884830-70884849 | None:intergenic | 35.0% | |
| ! | AATGTGCAGTGGTTTTCAAT+AGG | + | chr8_1:70884904-70884923 | None:intergenic | 35.0% |
| TCTTGTCATTAAGAAGCAGA+AGG | - | chr8_1:70885002-70885021 | Msa1211310:CDS | 35.0% | |
| ATAGTCTCATCGAGAGAAAA+CGG | + | chr8_1:70885190-70885209 | None:intergenic | 35.0% | |
| GGATATACTGGTGCATTTAT+AGG | - | chr8_1:70885291-70885310 | Msa1211310:intron | 35.0% | |
| AGGCAATGATAAACCTAAGA+GGG | + | chr8_1:70885529-70885548 | None:intergenic | 35.0% | |
| GGTTTATCATTGCCTCTAAT+TGG | - | chr8_1:70885534-70885553 | Msa1211310:intron | 35.0% | |
| TCTTCATAAATTGGCCATAG+CGG | + | chr8_1:70885621-70885640 | None:intergenic | 35.0% | |
| TGCTGCCTTTCTTCATAAAT+TGG | + | chr8_1:70885630-70885649 | None:intergenic | 35.0% | |
| TGATCAGAGTATGACAGAAA+CGG | - | chr8_1:70885727-70885746 | Msa1211310:intron | 35.0% | |
| TATATGTTCTCTCGGTTATG+AGG | + | chr8_1:70885783-70885802 | None:intergenic | 35.0% | |
| GATTTACCATTCTTCTACGT+AGG | - | chr8_1:70885914-70885933 | Msa1211310:intron | 35.0% | |
| TTTCTTGGTCCAATGTAAAC+AGG | - | chr8_1:70886010-70886029 | Msa1211310:CDS | 35.0% | |
| TTACAGCCTATGACTACAAA+CGG | + | chr8_1:70886040-70886059 | None:intergenic | 35.0% | |
| ! | TTTTCACCTGAACATAACAG+GGG | + | chr8_1:70886409-70886428 | None:intergenic | 35.0% |
| TACAAATCCTTGGATGTCTT+TGG | - | chr8_1:70886474-70886493 | Msa1211310:intron | 35.0% | |
| CTAAAGAGCAAGCTGTAAAT+CGG | - | chr8_1:70886720-70886739 | Msa1211310:intron | 35.0% | |
| TCCTTGGAAGATAGATTATC+TGG | + | chr8_1:70886839-70886858 | None:intergenic | 35.0% | |
| GGGGATTCTGATCAAAATTT+AGG | - | chr8_1:70887023-70887042 | Msa1211310:intron | 35.0% | |
| GTATATGACTATCTGATCTC+AGG | - | chr8_1:70887332-70887351 | Msa1211310:intron | 35.0% | |
| CATGAATAGACAAAAACCTG+TGG | + | chr8_1:70887369-70887388 | None:intergenic | 35.0% | |
| GTCTATTCATGCTTCATAGA+TGG | - | chr8_1:70887378-70887397 | Msa1211310:intron | 35.0% | |
| TAAGAACTCTTATGCAAACC+AGG | - | chr8_1:70887624-70887643 | Msa1211310:intron | 35.0% | |
| CTGTAAACTTGGGATTAATG+AGG | + | chr8_1:70887713-70887732 | None:intergenic | 35.0% | |
| ATACATCAGGCTGTAAACTT+GGG | + | chr8_1:70887723-70887742 | None:intergenic | 35.0% | |
| AATACATCAGGCTGTAAACT+TGG | + | chr8_1:70887724-70887743 | None:intergenic | 35.0% | |
| GCAGCAGATTTAACATATGA+TGG | + | chr8_1:70887988-70888007 | None:intergenic | 35.0% | |
| CTGCTTCTACTGTTGTTAAA+AGG | - | chr8_1:70888004-70888023 | Msa1211310:intron | 35.0% | |
| !! | TTGCTTTTATTTCAGCTCTC+AGG | - | chr8_1:70888099-70888118 | Msa1211310:intron | 35.0% |
| TTGTTCATGACCACTTAAAG+TGG | - | chr8_1:70888425-70888444 | Msa1211310:intron | 35.0% | |
| !! | ACAAATGATGCCACTTTAAG+TGG | + | chr8_1:70888438-70888457 | None:intergenic | 35.0% |
| !!! | TGGTTTTGTTTTGGTCATTG+CGG | + | chr8_1:70888554-70888573 | None:intergenic | 35.0% |
| !!! | AGGTGGTTTTGGTTTTGTTT+TGG | + | chr8_1:70888563-70888582 | None:intergenic | 35.0% |
| ! | TCGTTGTCGTTCAAAGATTT+TGG | - | chr8_1:70888785-70888804 | Msa1211310:intron | 35.0% |
| TTCACGATTATCTATCCACA+AGG | + | chr8_1:70888853-70888872 | None:intergenic | 35.0% | |
| AATCGTGAAACATGTGTCAA+TGG | - | chr8_1:70888864-70888883 | Msa1211310:CDS | 35.0% | |
| ATCGTGAAACATGTGTCAAT+GGG | - | chr8_1:70888865-70888884 | Msa1211310:CDS | 35.0% | |
| ATTGATTACCGGTAATCCTT+TGG | - | chr8_1:70888903-70888922 | Msa1211310:intron | 35.0% | |
| TTGATTACCGGTAATCCTTT+GGG | - | chr8_1:70888904-70888923 | Msa1211310:intron | 35.0% | |
| TCCACTACGAACATCTTTAA+TGG | - | chr8_1:70888938-70888957 | Msa1211310:intron | 35.0% | |
| TCCATTAAAGATGTTCGTAG+TGG | + | chr8_1:70888942-70888961 | None:intergenic | 35.0% | |
| TGACCCCACAAAAAATAACT+TGG | + | chr8_1:70888983-70889002 | None:intergenic | 35.0% | |
| AAGCTCCTTTCGATAAGCAT+CGG | + | chr8_1:70883708-70883727 | None:intergenic | 40.0% | |
| !! | ATCTGCTTCTTGAGTTGATC+AGG | + | chr8_1:70884004-70884023 | None:intergenic | 40.0% |
| CAAGAAGCAGATTGAGAACT+TGG | - | chr8_1:70884012-70884031 | Msa1211310:three_prime_UTR | 40.0% | |
| GCAAAATAAATGGCTCGCAT+TGG | + | chr8_1:70884211-70884230 | None:intergenic | 40.0% | |
| AGTTGGTTAGAAATCTCACC+AGG | - | chr8_1:70884329-70884348 | Msa1211310:intron | 40.0% | |
| ACAAAGGGGTTGGAAAGATA+AGG | + | chr8_1:70884372-70884391 | None:intergenic | 40.0% | |
| !! | TAAGCTGGTTTGATGGTTTG+GGG | + | chr8_1:70884401-70884420 | None:intergenic | 40.0% |
| !! | GATAAGCTGGTTTGATGGTT+TGG | + | chr8_1:70884403-70884422 | None:intergenic | 40.0% |
| ! | AACATAGTGGAGTGATAAGC+TGG | + | chr8_1:70884416-70884435 | None:intergenic | 40.0% |
| AGCTTATCACTCCACTATGT+TGG | - | chr8_1:70884415-70884434 | Msa1211310:intron | 40.0% | |
| ! | TACACCTTTTGCCAACATAG+TGG | + | chr8_1:70884429-70884448 | None:intergenic | 40.0% |
| ! | TATGTTGGCAAAAGGTGTAC+TGG | - | chr8_1:70884430-70884449 | Msa1211310:intron | 40.0% |
| ! | ATGTTGGCAAAAGGTGTACT+GGG | - | chr8_1:70884431-70884450 | Msa1211310:intron | 40.0% |
| !! | CAATCCTCTAAAATTGGCCT+AGG | + | chr8_1:70884581-70884600 | None:intergenic | 40.0% |
| CTATACACTACAACTGGAGA+TGG | - | chr8_1:70884689-70884708 | Msa1211310:intron | 40.0% | |
| ! | AGAGAAAACGGCTTGGATAT+TGG | + | chr8_1:70885178-70885197 | None:intergenic | 40.0% |
| ! | GTTTTCTCTCGATGAGACTA+TGG | - | chr8_1:70885189-70885208 | Msa1211310:CDS | 40.0% |
| ! | AAACCCTCTGCAAAGTTGAT+AGG | + | chr8_1:70885235-70885254 | None:intergenic | 40.0% |
| GGATGGGAAAGAAGTTTGAT+AGG | + | chr8_1:70885258-70885277 | None:intergenic | 40.0% | |
| TCCTTTACTTCTTCAGGGAT+GGG | + | chr8_1:70885274-70885293 | None:intergenic | 40.0% | |
| ATCCTTTACTTCTTCAGGGA+TGG | + | chr8_1:70885275-70885294 | None:intergenic | 40.0% | |
| ! | ACCATGAGTAACTTGCAGAT+TGG | - | chr8_1:70885451-70885470 | Msa1211310:intron | 40.0% |
| ACCAATCTGCAAGTTACTCA+TGG | + | chr8_1:70885455-70885474 | None:intergenic | 40.0% | |
| GTATTACTTAGAGTAGCCGA+AGG | - | chr8_1:70885502-70885521 | Msa1211310:intron | 40.0% | |
| ATAAACCTAAGAGGGACCTT+CGG | + | chr8_1:70885521-70885540 | None:intergenic | 40.0% | |
| GAGGCAATGATAAACCTAAG+AGG | + | chr8_1:70885530-70885549 | None:intergenic | 40.0% | |
| TATGAAGAAAGGCAGCACTA+TGG | - | chr8_1:70885633-70885652 | Msa1211310:intron | 40.0% | |
| !! | ATGGCGTTTTATGGTGGAAA+TGG | - | chr8_1:70885652-70885671 | Msa1211310:intron | 40.0% |
| !! | TGGCGTTTTATGGTGGAAAT+GGG | - | chr8_1:70885653-70885672 | Msa1211310:intron | 40.0% |
| GATCAGAGTATGACAGAAAC+GGG | - | chr8_1:70885728-70885747 | Msa1211310:intron | 40.0% | |
| GTGCTTGGTATATGTTCTCT+CGG | + | chr8_1:70885791-70885810 | None:intergenic | 40.0% | |
| TTAGCATCAGAACATGTGCT+TGG | + | chr8_1:70885806-70885825 | None:intergenic | 40.0% | |
| AACTTGCCTACGTAGAAGAA+TGG | + | chr8_1:70885923-70885942 | None:intergenic | 40.0% | |
| AACGGACAACCTGTTTACAT+TGG | + | chr8_1:70886022-70886041 | None:intergenic | 40.0% | |
| ! | TTTGACTTTAGACAGACCCA+TGG | - | chr8_1:70886102-70886121 | Msa1211310:CDS | 40.0% |
| !!! | GACAGACCCATGGAATTTTT+TGG | - | chr8_1:70886112-70886131 | Msa1211310:CDS | 40.0% |
| GACAGGAACATGATGAGAAA+AGG | - | chr8_1:70886367-70886386 | Msa1211310:intron | 40.0% | |
| AGGAACATGATGAGAAAAGG+CGG | - | chr8_1:70886370-70886389 | Msa1211310:intron | 40.0% | |
| TTTCACCTGAACATAACAGG+GGG | + | chr8_1:70886408-70886427 | None:intergenic | 40.0% | |
| !! | ATGTCTTTGGAGCAGTCATT+TGG | - | chr8_1:70886487-70886506 | Msa1211310:intron | 40.0% |
| !! | TGTCTTTGGAGCAGTCATTT+GGG | - | chr8_1:70886488-70886507 | Msa1211310:intron | 40.0% |
| ! | TTTACAGCTTGCTCTTTAGG+TGG | + | chr8_1:70886719-70886738 | None:intergenic | 40.0% |
| ! | CGATTTACAGCTTGCTCTTT+AGG | + | chr8_1:70886722-70886741 | None:intergenic | 40.0% |
| GCCAGATAATCTATCTTCCA+AGG | - | chr8_1:70886835-70886854 | Msa1211310:intron | 40.0% | |
| !!! | AGAAGCATTGACGCTTTTGT+CGG | - | chr8_1:70886971-70886990 | Msa1211310:intron | 40.0% |
| TTATCCAAAAGGAGTCAGTG+CGG | - | chr8_1:70887002-70887021 | Msa1211310:intron | 40.0% | |
| ! | ATTTAGGATGTCAGTATGGC+AGG | - | chr8_1:70887039-70887058 | Msa1211310:intron | 40.0% |
| ! | TTTAGGATGTCAGTATGGCA+GGG | - | chr8_1:70887040-70887059 | Msa1211310:intron | 40.0% |
| ! | GGCTTCTAGCTGAAAAAAGA+TGG | - | chr8_1:70887284-70887303 | Msa1211310:intron | 40.0% |
| AGACAAAAACCTGTGGCATA+TGG | + | chr8_1:70887362-70887381 | None:intergenic | 40.0% | |
| TGAATAGCACCAGAATTTGG+TGG | + | chr8_1:70887586-70887605 | None:intergenic | 40.0% | |
| GACTGAATAGCACCAGAATT+TGG | + | chr8_1:70887589-70887608 | None:intergenic | 40.0% | |
| AAACCAGGAGATCCAAGAAA+TGG | - | chr8_1:70887639-70887658 | Msa1211310:intron | 40.0% | |
| AGATCCAAGAAATGGTTCCT+GGG | - | chr8_1:70887647-70887666 | Msa1211310:intron | 40.0% | |
| ATATGGGGGCCTTAAGATTA+GGG | + | chr8_1:70887857-70887876 | None:intergenic | 40.0% | |
| TGATCCTCTTCCTGAAAGTT+TGG | + | chr8_1:70887937-70887956 | None:intergenic | 40.0% | |
| CTTTCAGGAAGAGGATCATA+TGG | - | chr8_1:70887939-70887958 | Msa1211310:intron | 40.0% | |
| ! | TATGATGGTTTCTGAGGAAG+TGG | + | chr8_1:70887973-70887992 | None:intergenic | 40.0% |
| CTTACCATAGATGTGAGTTC+TGG | + | chr8_1:70888048-70888067 | None:intergenic | 40.0% | |
| CAGACCACTGAATAAGCTAA+TGG | - | chr8_1:70888230-70888249 | Msa1211310:intron | 40.0% | |
| ! | GTTGCCATTAGCTTATTCAG+TGG | + | chr8_1:70888237-70888256 | None:intergenic | 40.0% |
| ! | ACTCTAGTGTCGAGAAAAGT+TGG | - | chr8_1:70888315-70888334 | Msa1211310:intron | 40.0% |
| !!! | TCATCAATGCTTGGTGCTTT+TGG | + | chr8_1:70888679-70888698 | None:intergenic | 40.0% |
| GTGTATGAGTCATCAATGCT+TGG | + | chr8_1:70888688-70888707 | None:intergenic | 40.0% | |
| CTCATACACAGCTTTCTTAG+AGG | - | chr8_1:70888699-70888718 | Msa1211310:intron | 40.0% | |
| TTAGAGGACATGAAATCCCT+TGG | - | chr8_1:70888715-70888734 | Msa1211310:intron | 40.0% | |
| ATCTATCCACAAGGTTTCTG+TGG | + | chr8_1:70888844-70888863 | None:intergenic | 40.0% | |
| TCAAATGCCCAAAGGATTAC+CGG | + | chr8_1:70888914-70888933 | None:intergenic | 40.0% | |
| TGGATTGATCAAATGCCCAA+AGG | + | chr8_1:70888922-70888941 | None:intergenic | 40.0% | |
| TTTGTGGGGTCAAATTGTCA+TGG | - | chr8_1:70888991-70889010 | Msa1211310:intron | 40.0% | |
| !! | CCTTTCGATAAGCATCGGTA+GGG | + | chr8_1:70883703-70883722 | None:intergenic | 45.0% |
| !! | TCCTTTCGATAAGCATCGGT+AGG | + | chr8_1:70883704-70883723 | None:intergenic | 45.0% |
| TCGAAAGGAGCTTCGCAAAA+AGG | - | chr8_1:70883715-70883734 | Msa1211310:three_prime_UTR | 45.0% | |
| AAGAAAGAAGGTGAGGGATG+TGG | - | chr8_1:70883961-70883980 | Msa1211310:three_prime_UTR | 45.0% | |
| AGAAAGAAGGTGAGGGATGT+GGG | - | chr8_1:70883962-70883981 | Msa1211310:three_prime_UTR | 45.0% | |
| CATCACCATCAGCATTATGC+TGG | - | chr8_1:70884120-70884139 | Msa1211310:CDS | 45.0% | |
| !! | GGAGTGATAAGCTGGTTTGA+TGG | + | chr8_1:70884408-70884427 | None:intergenic | 45.0% |
| CACTCCACTATGTTGGCAAA+AGG | - | chr8_1:70884422-70884441 | Msa1211310:intron | 45.0% | |
| ! | ACTGCCTAGGCCAATTTTAG+AGG | - | chr8_1:70884574-70884593 | Msa1211310:intron | 45.0% |
| GGAATACTGGTGTAGGGATT+AGG | + | chr8_1:70884758-70884777 | None:intergenic | 45.0% | |
| ! | CAATCCTTTGGTTGTTTCCC+TGG | - | chr8_1:70884809-70884828 | Msa1211310:CDS | 45.0% |
| CCACAACAAACAATGTGCAG+TGG | + | chr8_1:70884915-70884934 | None:intergenic | 45.0% | |
| ! | CCACTGCACATTGTTTGTTG+TGG | - | chr8_1:70884912-70884931 | Msa1211310:CDS | 45.0% |
| !! | CACATTGTTTGTTGTGGCAG+AGG | - | chr8_1:70884918-70884937 | Msa1211310:CDS | 45.0% |
| AAACAGTGAGAACTGAGCTC+TGG | - | chr8_1:70885142-70885161 | Msa1211310:CDS | 45.0% | |
| !! | CTGCAAAGTTGATAGGCTCA+GGG | + | chr8_1:70885228-70885247 | None:intergenic | 45.0% |
| !! | TCTGCAAAGTTGATAGGCTC+AGG | + | chr8_1:70885229-70885248 | None:intergenic | 45.0% |
| TGAGCCTATCAACTTTGCAG+AGG | - | chr8_1:70885228-70885247 | Msa1211310:CDS | 45.0% | |
| GAGCCTATCAACTTTGCAGA+GGG | - | chr8_1:70885229-70885248 | Msa1211310:CDS | 45.0% | |
| TCCCATCCCTGAAGAAGTAA+AGG | - | chr8_1:70885270-70885289 | Msa1211310:CDS | 45.0% | |
| ATAGTGGCCATGTCAGATTG+CGG | - | chr8_1:70885577-70885596 | Msa1211310:intron | 45.0% | |
| CATAAATTGGCCATAGCGGT+TGG | + | chr8_1:70885617-70885636 | None:intergenic | 45.0% | |
| ! | AGCACTATGGCGTTTTATGG+TGG | - | chr8_1:70885646-70885665 | Msa1211310:intron | 45.0% |
| !! | GGCGTTTTATGGTGGAAATG+GGG | - | chr8_1:70885654-70885673 | Msa1211310:intron | 45.0% |
| GCAAGTTCCACTAACAGTAG+CGG | - | chr8_1:70885936-70885955 | Msa1211310:intron | 45.0% | |
| ! | TTCCACTAACAGTAGCGGAA+GGG | - | chr8_1:70885941-70885960 | Msa1211310:intron | 45.0% |
| GGTTGTCCGTTTGTAGTCAT+AGG | - | chr8_1:70886031-70886050 | Msa1211310:CDS | 45.0% | |
| GGAACATGATGAGAAAAGGC+GGG | - | chr8_1:70886371-70886390 | Msa1211310:intron | 45.0% | |
| !! | GTCTTTGGAGCAGTCATTTG+GGG | - | chr8_1:70886489-70886508 | Msa1211310:intron | 45.0% |
| TCTGCACTTGTTCTCCTTTG+AGG | + | chr8_1:70886518-70886537 | None:intergenic | 45.0% | |
| ATTTCTCTCTTCGCCTTCAC+TGG | + | chr8_1:70886804-70886823 | None:intergenic | 45.0% | |
| AATCTATCTTCCAAGGAGCC+TGG | - | chr8_1:70886842-70886861 | Msa1211310:intron | 45.0% | |
| AAAAATGAGCCTACCTGACC+AGG | + | chr8_1:70886863-70886882 | None:intergenic | 45.0% | |
| TATCCAAAAGGAGTCAGTGC+GGG | - | chr8_1:70887003-70887022 | Msa1211310:intron | 45.0% | |
| TGGCTACTAGACACTTGTCA+TGG | - | chr8_1:70887398-70887417 | Msa1211310:intron | 45.0% | |
| ATGGTTGCCAAATGCCCAAA+TGG | - | chr8_1:70887417-70887436 | Msa1211310:intron | 45.0% | |
| TGGTTGCCAAATGCCCAAAT+GGG | - | chr8_1:70887418-70887437 | Msa1211310:intron | 45.0% | |
| TGTGTTCCCATTTGGGCATT+TGG | + | chr8_1:70887427-70887446 | None:intergenic | 45.0% | |
| ! | GAATTTGGTGGCATACGACT+TGG | + | chr8_1:70887574-70887593 | None:intergenic | 45.0% |
| AGTCGTATGCCACCAAATTC+TGG | - | chr8_1:70887574-70887593 | Msa1211310:intron | 45.0% | |
| !! | TCTGGTGCTATTCAGTCTGA+TGG | - | chr8_1:70887592-70887611 | Msa1211310:intron | 45.0% |
| GAACCATTTCTTGGATCTCC+TGG | + | chr8_1:70887645-70887664 | None:intergenic | 45.0% | |
| GAGATCCAAGAAATGGTTCC+TGG | - | chr8_1:70887646-70887665 | Msa1211310:intron | 45.0% | |
| ATTAATGAGGGTCCTGGACA+AGG | + | chr8_1:70887700-70887719 | None:intergenic | 45.0% | |
| TGGGAATCGAGATATTCCAG+GGG | + | chr8_1:70887749-70887768 | None:intergenic | 45.0% | |
| GTGGGAATCGAGATATTCCA+GGG | + | chr8_1:70887750-70887769 | None:intergenic | 45.0% | |
| TGATGGTCCCCCTAATCTTA+AGG | - | chr8_1:70887845-70887864 | Msa1211310:CDS | 45.0% | |
| TATGGGGGCCTTAAGATTAG+GGG | + | chr8_1:70887856-70887875 | None:intergenic | 45.0% | |
| CATATGGGGGCCTTAAGATT+AGG | + | chr8_1:70887858-70887877 | None:intergenic | 45.0% | |
| CTAATCTTAAGGCCCCCATA+TGG | - | chr8_1:70887856-70887875 | Msa1211310:CDS | 45.0% | |
| TCTTCCTGAAAGTTTGGAGG+AGG | + | chr8_1:70887931-70887950 | None:intergenic | 45.0% | |
| TCCTCCAAACTTTCAGGAAG+AGG | - | chr8_1:70887930-70887949 | Msa1211310:intron | 45.0% | |
| TCCTCTTCCTGAAAGTTTGG+AGG | + | chr8_1:70887934-70887953 | None:intergenic | 45.0% | |
| CACTCCAGAACTCACATCTA+TGG | - | chr8_1:70888041-70888060 | Msa1211310:intron | 45.0% | |
| ATCCACTGCTACTGCTACAT+GGG | - | chr8_1:70888287-70888306 | Msa1211310:intron | 45.0% | |
| ! | ACTGTTGACACAGGTGGTTT+TGG | + | chr8_1:70888574-70888593 | None:intergenic | 45.0% |
| ATGGTTGAGATCACTGTGAG+TGG | - | chr8_1:70888746-70888765 | Msa1211310:intron | 45.0% | |
| TTTGAACGACAACGACTGAG+AGG | + | chr8_1:70888780-70888799 | None:intergenic | 45.0% | |
| ATGACGAAGACGACCAAAGG+CGG | - | chr8_1:70883665-70883684 | Msa1211310:three_prime_UTR | 50.0% | |
| GTTCATCACCTTACCGCCTT+TGG | + | chr8_1:70883681-70883700 | None:intergenic | 50.0% | |
| CCCTACCGATGCTTATCGAA+AGG | - | chr8_1:70883700-70883719 | Msa1211310:three_prime_UTR | 50.0% | |
| GAAAGAAGGTGAGGGATGTG+GGG | - | chr8_1:70883963-70883982 | Msa1211310:three_prime_UTR | 50.0% | |
| AGGCTGATGTGACAGAACAG+TGG | - | chr8_1:70884277-70884296 | Msa1211310:CDS | 50.0% | |
| GTATTGCAGGTTCGAATGCC+TGG | + | chr8_1:70884350-70884369 | None:intergenic | 50.0% | |
| GTTTGGGGAGAGACACAAAG+GGG | + | chr8_1:70884386-70884405 | None:intergenic | 50.0% | |
| GGTTTGGGGAGAGACACAAA+GGG | + | chr8_1:70884387-70884406 | None:intergenic | 50.0% | |
| ! | TGGTTTGGGGAGAGACACAA+AGG | + | chr8_1:70884388-70884407 | None:intergenic | 50.0% |
| AACTGGAGATGGGTCAGTCT+AGG | - | chr8_1:70884700-70884719 | Msa1211310:intron | 50.0% | |
| CATGCCAGGGAAACAACCAA+AGG | + | chr8_1:70884816-70884835 | None:intergenic | 50.0% | |
| ! | TTTGTTGTGGCAGAGGCTGA+TGG | - | chr8_1:70884925-70884944 | Msa1211310:CDS | 50.0% |
| CTCATCGAGAGAAAACGGCT+TGG | + | chr8_1:70885185-70885204 | None:intergenic | 50.0% | |
| ! | GGATTTTTCGCCAACCGCTA+TGG | - | chr8_1:70885604-70885623 | Msa1211310:intron | 50.0% |
| ! | GGCAGCACTATGGCGTTTTA+TGG | - | chr8_1:70885643-70885662 | Msa1211310:intron | 50.0% |
| ! | GTTCCACTAACAGTAGCGGA+AGG | - | chr8_1:70885940-70885959 | Msa1211310:intron | 50.0% |
| ! | AGTAGCGGAAGGGACCTATT+GGG | - | chr8_1:70885951-70885970 | Msa1211310:intron | 50.0% |
| TGATGAGAAAAGGCGGGAGA+AGG | - | chr8_1:70886377-70886396 | Msa1211310:intron | 50.0% | |
| GATGAGAAAAGGCGGGAGAA+GGG | - | chr8_1:70886378-70886397 | Msa1211310:intron | 50.0% | |
| GACTGCTCCAAAGACATCCA+AGG | + | chr8_1:70886484-70886503 | None:intergenic | 50.0% | |
| ! | GTCATTTGGGGCTTCCTCAA+AGG | - | chr8_1:70886501-70886520 | Msa1211310:intron | 50.0% |
| GAACTAGCATCAGGAAGTGG+TGG | + | chr8_1:70886569-70886588 | None:intergenic | 50.0% | |
| GCTGAACTAGCATCAGGAAG+TGG | + | chr8_1:70886572-70886591 | None:intergenic | 50.0% | |
| CCATCAGCTGAACTAGCATC+AGG | + | chr8_1:70886578-70886597 | None:intergenic | 50.0% | |
| CCTGATGCTAGTTCAGCTGA+TGG | - | chr8_1:70886575-70886594 | Msa1211310:intron | 50.0% | |
| ! | GGAGGTGGTGGTAATGATAC+AGG | + | chr8_1:70886671-70886690 | None:intergenic | 50.0% |
| ! | ACAGCTTGCTCTTTAGGTGG+AGG | + | chr8_1:70886716-70886735 | None:intergenic | 50.0% |
| !!! | TGAGACTGTTTTAGGGGTGG+AGG | + | chr8_1:70886764-70886783 | None:intergenic | 50.0% |
| ! | AGGCGGCTGAGACTGTTTTA+GGG | + | chr8_1:70886771-70886790 | None:intergenic | 50.0% |
| ATCCAAAAGGAGTCAGTGCG+GGG | - | chr8_1:70887004-70887023 | Msa1211310:intron | 50.0% | |
| TCAGGTATGCCATATGCCAC+AGG | - | chr8_1:70887350-70887369 | Msa1211310:intron | 50.0% | |
| ! | TTTGGTGGCATACGACTTGG+TGG | + | chr8_1:70887571-70887590 | None:intergenic | 50.0% |
| CAAGGAGGTTGTTGTCTTGG+AGG | + | chr8_1:70887682-70887701 | None:intergenic | 50.0% | |
| GGACAAGGAGGTTGTTGTCT+TGG | + | chr8_1:70887685-70887704 | None:intergenic | 50.0% | |
| AGACAACAACCTCCTTGTCC+AGG | - | chr8_1:70887685-70887704 | Msa1211310:intron | 50.0% | |
| CTTGGGATTAATGAGGGTCC+TGG | + | chr8_1:70887706-70887725 | None:intergenic | 50.0% | |
| ATTCCAGGGGGCAATACATC+AGG | + | chr8_1:70887736-70887755 | None:intergenic | 50.0% | |
| GGGAATCGAGATATTCCAGG+GGG | + | chr8_1:70887748-70887767 | None:intergenic | 50.0% | |
| GGTGGGAATCGAGATATTCC+AGG | + | chr8_1:70887751-70887770 | None:intergenic | 50.0% | |
| AATGGAGGCCTCATATCAGG+TGG | + | chr8_1:70887784-70887803 | None:intergenic | 50.0% | |
| !! | GGTAATGGAGGCCTCATATC+AGG | + | chr8_1:70887787-70887806 | None:intergenic | 50.0% |
| ! | AGTCCAGTCACAGGTAATGG+AGG | + | chr8_1:70887799-70887818 | None:intergenic | 50.0% |
| GGAAGTCCAGTCACAGGTAA+TGG | + | chr8_1:70887802-70887821 | None:intergenic | 50.0% | |
| TTACCTGTGACTGGACTTCC+TGG | - | chr8_1:70887802-70887821 | Msa1211310:intron | 50.0% | |
| ATTAGGGGGACCATCATTCC+AGG | + | chr8_1:70887841-70887860 | None:intergenic | 50.0% | |
| ATGGGGGCCTTAAGATTAGG+GGG | + | chr8_1:70887855-70887874 | None:intergenic | 50.0% | |
| AGTGGTGGTCTCATCATTGG+AGG | + | chr8_1:70887898-70887917 | None:intergenic | 50.0% | |
| GGAAGTGGTGGTCTCATCAT+TGG | + | chr8_1:70887901-70887920 | None:intergenic | 50.0% | |
| TGAAAGTTTGGAGGAGGACC+AGG | + | chr8_1:70887925-70887944 | None:intergenic | 50.0% | |
| TGGTCCTCCTCCAAACTTTC+AGG | - | chr8_1:70887924-70887943 | Msa1211310:intron | 50.0% | |
| ! | TCTGGAGTGTGCTGAGCTAA+TGG | + | chr8_1:70888030-70888049 | None:intergenic | 50.0% |
| TAGCAGTAGCAGTGGATCAC+TGG | + | chr8_1:70888284-70888303 | None:intergenic | 50.0% | |
| GATCCACTGCTACTGCTACA+TGG | - | chr8_1:70888286-70888305 | Msa1211310:intron | 50.0% | |
| ACTAGGTTCCTGCATCTGTG+CGG | - | chr8_1:70888515-70888534 | Msa1211310:intron | 50.0% | |
| ACTGACACTGTTGACACAGG+TGG | + | chr8_1:70888580-70888599 | None:intergenic | 50.0% | |
| GACACTGACACTGTTGACAC+AGG | + | chr8_1:70888583-70888602 | None:intergenic | 50.0% | |
| AGAACAGTCCCTGTGACACT+CGG | - | chr8_1:70888610-70888629 | Msa1211310:intron | 50.0% | |
| AAATCCCTTGGCGCACTTGA+TGG | - | chr8_1:70888727-70888746 | Msa1211310:intron | 50.0% | |
| TCAACCATCAAGTGCGCCAA+GGG | + | chr8_1:70888734-70888753 | None:intergenic | 50.0% | |
| GTTGAGATCACTGTGAGTGG+TGG | - | chr8_1:70888749-70888768 | Msa1211310:intron | 50.0% | |
| GTGGGGTCAAATTGTCATGG+AGG | - | chr8_1:70888994-70889013 | Msa1211310:intron | 50.0% | |
| GAAGACGACCAAAGGCGGTA+AGG | - | chr8_1:70883670-70883689 | Msa1211310:three_prime_UTR | 55.0% | |
| AGTAGCCGAAGGTCCCTCTT+AGG | - | chr8_1:70885513-70885532 | Msa1211310:intron | 55.0% | |
| TCCACCACCGCAATCTGACA+TGG | + | chr8_1:70885587-70885606 | None:intergenic | 55.0% | |
| GTCCCTTCCGCTACTGTTAG+TGG | + | chr8_1:70885946-70885965 | None:intergenic | 55.0% | |
| ! | CAGTAGCGGAAGGGACCTAT+TGG | - | chr8_1:70885950-70885969 | Msa1211310:intron | 55.0% |
| GTGAGCCCCCTGTTATGTTC+AGG | - | chr8_1:70886400-70886419 | Msa1211310:intron | 55.0% | |
| !! | ATCAGGAAGTGGTGGTGGTG+GGG | + | chr8_1:70886561-70886580 | None:intergenic | 55.0% |
| !! | CATCAGGAAGTGGTGGTGGT+GGG | + | chr8_1:70886562-70886581 | None:intergenic | 55.0% |
| CTAGCATCAGGAAGTGGTGG+TGG | + | chr8_1:70886566-70886585 | None:intergenic | 55.0% | |
| ATTTGGAGGCAAGGGAGGTG+GGG | + | chr8_1:70886633-70886652 | None:intergenic | 55.0% | |
| GATTTGGAGGCAAGGGAGGT+GGG | + | chr8_1:70886634-70886653 | None:intergenic | 55.0% | |
| TCTTTAGGTGGAGGACCAGG+AGG | + | chr8_1:70886707-70886726 | None:intergenic | 55.0% | |
| TGCTCTTTAGGTGGAGGACC+AGG | + | chr8_1:70886710-70886729 | None:intergenic | 55.0% | |
| !!! | TGTTTTAGGGGTGGAGGAGG+AGG | + | chr8_1:70886758-70886777 | None:intergenic | 55.0% |
| !!! | GACTGTTTTAGGGGTGGAGG+AGG | + | chr8_1:70886761-70886780 | None:intergenic | 55.0% |
| !!! | GGCTGAGACTGTTTTAGGGG+TGG | + | chr8_1:70886767-70886786 | None:intergenic | 55.0% |
| !! | GGCGGCTGAGACTGTTTTAG+GGG | + | chr8_1:70886770-70886789 | None:intergenic | 55.0% |
| ! | GAGGCGGCTGAGACTGTTTT+AGG | + | chr8_1:70886772-70886791 | None:intergenic | 55.0% |
| ATCTTCCAAGGAGCCTGGTC+AGG | - | chr8_1:70886847-70886866 | Msa1211310:intron | 55.0% | |
| !!! | ATCCCCGCACTGACTCCTTT+TGG | + | chr8_1:70887009-70887028 | None:intergenic | 55.0% |
| !! | ATACGACTTGGTGGAGGAGG+CGG | + | chr8_1:70887562-70887581 | None:intergenic | 55.0% |
| GAGGCCCAGGAACCATTTCT+TGG | + | chr8_1:70887654-70887673 | None:intergenic | 55.0% | |
| TGTTGTCTTGGAGGAGGAGG+AGG | + | chr8_1:70887673-70887692 | None:intergenic | 55.0% | |
| GGTTGTTGTCTTGGAGGAGG+AGG | + | chr8_1:70887676-70887695 | None:intergenic | 55.0% | |
| GGAGGTTGTTGTCTTGGAGG+AGG | + | chr8_1:70887679-70887698 | None:intergenic | 55.0% | |
| AATGAGGGTCCTGGACAAGG+AGG | + | chr8_1:70887697-70887716 | None:intergenic | 55.0% | |
| !! | CTCATATCAGGTGGTGGTGG+GGG | + | chr8_1:70887775-70887794 | None:intergenic | 55.0% |
| ! | CCTCATATCAGGTGGTGGTG+GGG | + | chr8_1:70887776-70887795 | None:intergenic | 55.0% |
| ! | GCCTCATATCAGGTGGTGGT+GGG | + | chr8_1:70887777-70887796 | None:intergenic | 55.0% |
| AGGCCTCCATTACCTGTGAC+TGG | - | chr8_1:70887793-70887812 | Msa1211310:intron | 55.0% | |
| TGACCAGGAAGTCCAGTCAC+AGG | + | chr8_1:70887808-70887827 | None:intergenic | 55.0% | |
| TGTGACTGGACTTCCTGGTC+AGG | - | chr8_1:70887807-70887826 | Msa1211310:intron | 55.0% | |
| GGTGGTCTCATCATTGGAGG+AGG | + | chr8_1:70887895-70887914 | None:intergenic | 55.0% | |
| ATGAGACCACCACTTCCACC+TGG | - | chr8_1:70887904-70887923 | Msa1211310:intron | 55.0% | |
| AAGTTTGGAGGAGGACCAGG+TGG | + | chr8_1:70887922-70887941 | None:intergenic | 55.0% | |
| TGCCCATGTAGCAGTAGCAG+TGG | + | chr8_1:70888292-70888311 | None:intergenic | 55.0% | |
| CTAGGTTCCTGCATCTGTGC+GGG | - | chr8_1:70888516-70888535 | Msa1211310:intron | 55.0% | |
| TGCATCTGTGCGGGTGAGAA+GGG | - | chr8_1:70888525-70888544 | Msa1211310:intron | 55.0% | |
| GAACAGTCCCTGTGACACTC+GGG | - | chr8_1:70888611-70888630 | Msa1211310:intron | 55.0% | |
| TAGTTGGCCCGAGTGTCACA+GGG | + | chr8_1:70888621-70888640 | None:intergenic | 55.0% | |
| ATAGTTGGCCCGAGTGTCAC+AGG | + | chr8_1:70888622-70888641 | None:intergenic | 55.0% | |
| CTCAACCATCAAGTGCGCCA+AGG | + | chr8_1:70888735-70888754 | None:intergenic | 55.0% | |
| GGGGAGAGACACAAAGGGGT+TGG | + | chr8_1:70884382-70884401 | None:intergenic | 60.0% | |
| ! | GGCAGAGGCTGATGGTGCAT+TGG | - | chr8_1:70884933-70884952 | Msa1211310:CDS | 60.0% |
| GTGGCCATGTCAGATTGCGG+TGG | - | chr8_1:70885580-70885599 | Msa1211310:intron | 60.0% | |
| GCCATGTCAGATTGCGGTGG+TGG | - | chr8_1:70885583-70885602 | Msa1211310:intron | 60.0% | |
| !! | TCAGGAAGTGGTGGTGGTGG+GGG | + | chr8_1:70886560-70886579 | None:intergenic | 60.0% |
| !! | GCATCAGGAAGTGGTGGTGG+TGG | + | chr8_1:70886563-70886582 | None:intergenic | 60.0% |
| GGAGGCAGTGGCAAAGATGC+AGG | + | chr8_1:70886611-70886630 | None:intergenic | 60.0% | |
| TTTGGAGGCAAGGGAGGTGG+GGG | + | chr8_1:70886632-70886651 | None:intergenic | 60.0% | |
| GGATTTGGAGGCAAGGGAGG+TGG | + | chr8_1:70886635-70886654 | None:intergenic | 60.0% | |
| GCAGCGGGATTTGGAGGCAA+GGG | + | chr8_1:70886641-70886660 | None:intergenic | 60.0% | |
| AGCAGCGGGATTTGGAGGCA+AGG | + | chr8_1:70886642-70886661 | None:intergenic | 60.0% | |
| ! | TGATACAGGCACCGCAGCAG+CGG | + | chr8_1:70886657-70886676 | None:intergenic | 60.0% |
| TTAGGTGGAGGACCAGGAGG+TGG | + | chr8_1:70886704-70886723 | None:intergenic | 60.0% | |
| TTAGGGGTGGAGGAGGAGGA+GGG | + | chr8_1:70886754-70886773 | None:intergenic | 60.0% | |
| TTTAGGGGTGGAGGAGGAGG+AGG | + | chr8_1:70886755-70886774 | None:intergenic | 60.0% | |
| TCTTCGCCTTCACTGGTGCC+AGG | + | chr8_1:70886797-70886816 | None:intergenic | 60.0% | |
| TCCAAGGAGCCTGGTCAGGT+AGG | - | chr8_1:70886851-70886870 | Msa1211310:intron | 60.0% | |
| !! | GGCATACGACTTGGTGGAGG+AGG | + | chr8_1:70887565-70887584 | None:intergenic | 60.0% |
| !! | GGTGGCATACGACTTGGTGG+AGG | + | chr8_1:70887568-70887587 | None:intergenic | 60.0% |
| CAGCCTGATGTATTGCCCCC+TGG | - | chr8_1:70887730-70887749 | Msa1211310:intron | 60.0% | |
| !! | ATATCAGGTGGTGGTGGGGG+CGG | + | chr8_1:70887772-70887791 | None:intergenic | 60.0% |
| CCCCACCACCACCTGATATG+AGG | - | chr8_1:70887773-70887792 | Msa1211310:intron | 60.0% | |
| ! | GGCCTCATATCAGGTGGTGG+TGG | + | chr8_1:70887778-70887797 | None:intergenic | 60.0% |
| GGAGGCCTCATATCAGGTGG+TGG | + | chr8_1:70887781-70887800 | None:intergenic | 60.0% | |
| GGCACCTCCTCCTGGAATGA+TGG | - | chr8_1:70887828-70887847 | Msa1211310:CDS | 60.0% | |
| GGGACCATCATTCCAGGAGG+AGG | + | chr8_1:70887835-70887854 | None:intergenic | 60.0% | |
| AGGGGGACCATCATTCCAGG+AGG | + | chr8_1:70887838-70887857 | None:intergenic | 60.0% | |
| CCAGGTGGAGGACCATATGG+GGG | + | chr8_1:70887871-70887890 | None:intergenic | 60.0% | |
| CCCAGGTGGAGGACCATATG+GGG | + | chr8_1:70887872-70887891 | None:intergenic | 60.0% | |
| CCCCATATGGTCCTCCACCT+GGG | - | chr8_1:70887869-70887888 | Msa1211310:CDS | 60.0% | |
| GCCCAGGTGGAGGACCATAT+GGG | + | chr8_1:70887873-70887892 | None:intergenic | 60.0% | |
| ATCATTGGAGGAGGCCCAGG+TGG | + | chr8_1:70887886-70887905 | None:intergenic | 60.0% | |
| CTCATCATTGGAGGAGGCCC+AGG | + | chr8_1:70887889-70887908 | None:intergenic | 60.0% | |
| CTTCTCACCCGCACAGATGC+AGG | + | chr8_1:70888526-70888545 | None:intergenic | 60.0% | |
| CTGCATCTGTGCGGGTGAGA+AGG | - | chr8_1:70888524-70888543 | Msa1211310:intron | 60.0% | |
| TGGGGGCCACAGAAACCTTG+TGG | - | chr8_1:70888835-70888854 | Msa1211310:CDS | 60.0% | |
| GCGGGATTTGGAGGCAAGGG+AGG | + | chr8_1:70886638-70886657 | None:intergenic | 65.0% | |
| GCCTCCAAATCCCGCTGCTG+CGG | - | chr8_1:70886643-70886662 | Msa1211310:intron | 65.0% | |
| ACCGCAGCAGCGGGATTTGG+AGG | + | chr8_1:70886647-70886666 | None:intergenic | 65.0% | |
| ! | GATACAGGCACCGCAGCAGC+GGG | + | chr8_1:70886656-70886675 | None:intergenic | 65.0% |
| GGAGGAGGAGGAGGGGGTAA+AGG | + | chr8_1:70886746-70886765 | None:intergenic | 65.0% | |
| TAGGGGTGGAGGAGGAGGAG+GGG | + | chr8_1:70886753-70886772 | None:intergenic | 65.0% | |
| ! | TCACTGGTGCCAGGTGGAGG+CGG | + | chr8_1:70886788-70886807 | None:intergenic | 65.0% |
| ! | CCTTCACTGGTGCCAGGTGG+AGG | + | chr8_1:70886791-70886810 | None:intergenic | 65.0% |
| CCTCCACCTGGCACCAGTGA+AGG | - | chr8_1:70886788-70886807 | Msa1211310:intron | 65.0% | |
| ! | TCGCCTTCACTGGTGCCAGG+TGG | + | chr8_1:70886794-70886813 | None:intergenic | 65.0% |
| GCCTACCTGACCAGGCTCCT+TGG | + | chr8_1:70886855-70886874 | None:intergenic | 65.0% | |
| CCCCCATATGGTCCTCCACC+TGG | - | chr8_1:70887868-70887887 | Msa1211310:CDS | 65.0% | |
| GGCCCAGGTGGAGGACCATA+TGG | + | chr8_1:70887874-70887893 | None:intergenic | 65.0% | |
| ATTGGAGGAGGCCCAGGTGG+AGG | + | chr8_1:70887883-70887902 | None:intergenic | 65.0% | |
| GGAGGACCAGGTGGAAGTGG+TGG | + | chr8_1:70887913-70887932 | None:intergenic | 65.0% | |
| GGAGGAGGACCAGGTGGAAG+TGG | + | chr8_1:70887916-70887935 | None:intergenic | 65.0% | |
| AAGGGAGGTGGGGGAGGCAG+TGG | + | chr8_1:70886623-70886642 | None:intergenic | 70.0% | |
| GGCACCGCAGCAGCGGGATT+TGG | + | chr8_1:70886650-70886669 | None:intergenic | 70.0% | |
| ! | GGTGGCGGCAAAGGAGGTGG+TGG | + | chr8_1:70886683-70886702 | None:intergenic | 70.0% |
| !! | GGTGGTGGCGGCAAAGGAGG+TGG | + | chr8_1:70886686-70886705 | None:intergenic | 70.0% |
| !! | GGAGGTGGTGGCGGCAAAGG+AGG | + | chr8_1:70886689-70886708 | None:intergenic | 70.0% |
| !! | CCAGGAGGTGGTGGCGGCAA+AGG | + | chr8_1:70886692-70886711 | None:intergenic | 70.0% |
| CCTTTGCCGCCACCACCTCC+TGG | - | chr8_1:70886689-70886708 | Msa1211310:intron | 70.0% | |
| ! | GGAGGACCAGGAGGTGGTGG+CGG | + | chr8_1:70886698-70886717 | None:intergenic | 70.0% |
| GGTGGAGGACCAGGAGGTGG+TGG | + | chr8_1:70886701-70886720 | None:intergenic | 70.0% | |
| AGGGGTGGAGGAGGAGGAGG+GGG | + | chr8_1:70886752-70886771 | None:intergenic | 70.0% | |
| CAGTCTCAGCCGCCTCCACC+TGG | - | chr8_1:70886776-70886795 | Msa1211310:intron | 70.0% | |
| !! | CGACTTGGTGGAGGAGGCGG+CGG | + | chr8_1:70887559-70887578 | None:intergenic | 70.0% |
| CTTGGAGGAGGAGGAGGCCC+AGG | + | chr8_1:70887667-70887686 | None:intergenic | 70.0% | |
| !! | CCAGGAGGAGGTGCCTGACC+AGG | + | chr8_1:70887823-70887842 | None:intergenic | 70.0% |
| CCTGGTCAGGCACCTCCTCC+TGG | - | chr8_1:70887820-70887839 | Msa1211310:CDS | 70.0% | |
| GGAGGCAAGGGAGGTGGGGG+AGG | + | chr8_1:70886629-70886648 | None:intergenic | 75.0% | |
| CTTGGTGGAGGAGGCGGCGG+AGG | + | chr8_1:70887556-70887575 | None:intergenic | 75.0% | |
| !! | CAGGTGGTGGTGGGGGCGGT+GGG | + | chr8_1:70887768-70887787 | None:intergenic | 75.0% |
| !! | TCAGGTGGTGGTGGGGGCGG+TGG | + | chr8_1:70887769-70887788 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 70883665 | 70889177 | 70883665 | ID=Msa1211310;Name=Msa1211310 |
| chr8_1 | mRNA | 70883665 | 70889177 | 70883665 | ID=Msa1211310-mRNA-1;Parent=Msa1211310;Name=Msa1211310-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|1|0.85|1|1|1|7|424|477 |
| chr8_1 | exon | 70883665 | 70884322 | 70883665 | ID=Msa1211310-mRNA-1:exon:23729;Parent=Msa1211310-mRNA-1 |
| chr8_1 | exon | 70884780 | 70885298 | 70884780 | ID=Msa1211310-mRNA-1:exon:23728;Parent=Msa1211310-mRNA-1 |
| chr8_1 | exon | 70885974 | 70886340 | 70885974 | ID=Msa1211310-mRNA-1:exon:23727;Parent=Msa1211310-mRNA-1 |
| chr8_1 | exon | 70886421 | 70886470 | 70886421 | ID=Msa1211310-mRNA-1:exon:23726;Parent=Msa1211310-mRNA-1 |
| chr8_1 | exon | 70887819 | 70887904 | 70887819 | ID=Msa1211310-mRNA-1:exon:23725;Parent=Msa1211310-mRNA-1 |
| chr8_1 | exon | 70888799 | 70888892 | 70888799 | ID=Msa1211310-mRNA-1:exon:23724;Parent=Msa1211310-mRNA-1 |
| chr8_1 | exon | 70889094 | 70889177 | 70889094 | ID=Msa1211310-mRNA-1:exon:23723;Parent=Msa1211310-mRNA-1 |
| chr8_1 | CDS | 70889094 | 70889177 | 70889094 | ID=Msa1211310-mRNA-1:cds;Parent=Msa1211310-mRNA-1 |
| chr8_1 | CDS | 70888799 | 70888892 | 70888799 | ID=Msa1211310-mRNA-1:cds;Parent=Msa1211310-mRNA-1 |
| chr8_1 | CDS | 70887819 | 70887904 | 70887819 | ID=Msa1211310-mRNA-1:cds;Parent=Msa1211310-mRNA-1 |
| chr8_1 | CDS | 70886421 | 70886470 | 70886421 | ID=Msa1211310-mRNA-1:cds;Parent=Msa1211310-mRNA-1 |
| chr8_1 | CDS | 70885974 | 70886340 | 70885974 | ID=Msa1211310-mRNA-1:cds;Parent=Msa1211310-mRNA-1 |
| chr8_1 | CDS | 70884780 | 70885298 | 70884780 | ID=Msa1211310-mRNA-1:cds;Parent=Msa1211310-mRNA-1 |
| chr8_1 | CDS | 70884089 | 70884322 | 70884089 | ID=Msa1211310-mRNA-1:cds;Parent=Msa1211310-mRNA-1 |
| chr8_1 | three_prime_UTR | 70883665 | 70884088 | 70883665 | ID=Msa1211310-mRNA-1:three_prime_utr;Parent=Msa1211310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
