Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1263210 | RHN64151.1 | 95.935 | 246 | 10 | 0 | 512 | 757 | 263 | 508 | 2.27e-165 | 497 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1263210 | sp|Q43077|AMO_PEA | 93.033 | 244 | 17 | 0 | 512 | 755 | 429 | 672 | 8.49e-160 | 481 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1263210 | A0A396IH34 | 95.935 | 246 | 10 | 0 | 512 | 757 | 263 | 508 | 1.08e-165 | 497 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1037310 | Msa1263210 | 0.813212 | 2.869409e-51 | -8.615850e-47 |
Msa1156240 | Msa1263210 | 0.806381 | 8.455257e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1263210 | MtrunA17_Chr4g0065991 | 95.935 | 246 | 10 | 0 | 512 | 757 | 263 | 508 | 2.09e-169 | 497 |
Msa1263210 | MtrunA17_Chr4g0065981 | 93.061 | 245 | 17 | 0 | 513 | 757 | 431 | 675 | 2.90e-162 | 485 |
Msa1263210 | MtrunA17_Chr4g0061881 | 48.595 | 605 | 192 | 21 | 4 | 513 | 5 | 585 | 6.55e-156 | 468 |
Msa1263210 | MtrunA17_Chr4g0023331 | 88.618 | 246 | 28 | 0 | 512 | 757 | 170 | 415 | 1.05e-155 | 459 |
Msa1263210 | MtrunA17_Chr4g0065961 | 88.115 | 244 | 29 | 0 | 512 | 755 | 423 | 666 | 2.64e-153 | 461 |
Msa1263210 | MtrunA17_Chr2g0307851 | 46.038 | 530 | 199 | 15 | 56 | 513 | 83 | 597 | 1.28e-133 | 410 |
Msa1263210 | MtrunA17_Chr1g0205571 | 66.667 | 246 | 82 | 0 | 510 | 755 | 426 | 671 | 8.29e-117 | 367 |
Msa1263210 | MtrunA17_Chr1g0205541 | 57.511 | 233 | 99 | 0 | 510 | 742 | 426 | 658 | 1.89e-91 | 300 |
Msa1263210 | MtrunA17_Chr5g0437391 | 52.960 | 321 | 112 | 9 | 179 | 488 | 8 | 300 | 3.36e-83 | 268 |
Msa1263210 | MtrunA17_Chr5g0408331 | 45.833 | 360 | 89 | 8 | 54 | 386 | 32 | 312 | 1.29e-80 | 260 |
Msa1263210 | MtrunA17_Chr3g0119641 | 55.128 | 234 | 102 | 2 | 513 | 743 | 480 | 713 | 2.99e-80 | 271 |
Msa1263210 | MtrunA17_Chr4g0073611 | 47.157 | 299 | 106 | 7 | 131 | 402 | 2 | 275 | 7.60e-70 | 231 |
Msa1263210 | MtrunA17_Chr4g0061841 | 39.175 | 291 | 89 | 10 | 130 | 399 | 8 | 231 | 2.31e-43 | 157 |
Msa1263210 | MtrunA17_Chr5g0437441 | 69.903 | 103 | 27 | 2 | 82 | 183 | 2 | 101 | 1.16e-41 | 147 |
Msa1263210 | MtrunA17_Chr4g0069071 | 31.805 | 349 | 189 | 9 | 117 | 428 | 11 | 347 | 1.59e-39 | 150 |
Msa1263210 | MtrunA17_Chr5g0437451 | 44.595 | 222 | 47 | 7 | 294 | 513 | 1 | 148 | 1.91e-36 | 134 |
Msa1263210 | MtrunA17_Chr8g0344851 | 49.112 | 169 | 54 | 5 | 369 | 513 | 2 | 162 | 2.66e-36 | 135 |
Msa1263210 | MtrunA17_Chr4g0076561 | 41.317 | 167 | 81 | 4 | 285 | 450 | 2 | 152 | 3.33e-29 | 115 |
Msa1263210 | MtrunA17_Chr4g0064001 | 54.198 | 131 | 51 | 4 | 391 | 513 | 2 | 131 | 9.56e-29 | 115 |
Msa1263210 | MtrunA17_Chr4g0076571 | 72.857 | 70 | 19 | 0 | 126 | 195 | 1 | 70 | 5.80e-28 | 108 |
Msa1263210 | MtrunA17_Chr3g0117081 | 28.452 | 239 | 159 | 5 | 510 | 742 | 504 | 736 | 2.38e-24 | 108 |
Msa1263210 | MtrunA17_Chr5g0412801 | 28.571 | 238 | 160 | 5 | 510 | 742 | 476 | 708 | 2.02e-22 | 102 |
Msa1263210 | MtrunA17_Chr8g0368021 | 39.844 | 128 | 73 | 3 | 626 | 750 | 37 | 163 | 1.06e-21 | 93.2 |
Msa1263210 | MtrunA17_Chr8g0344831 | 52.294 | 109 | 50 | 2 | 285 | 392 | 14 | 121 | 1.07e-21 | 91.3 |
Msa1263210 | MtrunA17_Chr5g0408341 | 72.917 | 48 | 13 | 0 | 466 | 513 | 1 | 48 | 6.69e-17 | 78.2 |
Msa1263210 | MtrunA17_Chr4g0061831 | 43.925 | 107 | 37 | 3 | 415 | 511 | 18 | 111 | 2.11e-16 | 75.9 |
Msa1263210 | MtrunA17_Chr8g0344821 | 67.241 | 58 | 16 | 1 | 459 | 513 | 46 | 103 | 1.17e-15 | 73.9 |
Msa1263210 | MtrunA17_Chr4g0073621 | 80.488 | 41 | 8 | 0 | 473 | 513 | 15 | 55 | 5.07e-15 | 70.5 |
Msa1263210 | MtrunA17_Chr4g0063991 | 52.941 | 68 | 30 | 2 | 294 | 360 | 1 | 67 | 1.06e-12 | 64.3 |
Msa1263210 | MtrunA17_Chr4g0069081 | 51.724 | 58 | 27 | 1 | 456 | 513 | 17 | 73 | 2.42e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1263210 | AT1G73990.1 | 41.002 | 539 | 223 | 14 | 51 | 513 | 84 | 603 | 4.75e-118 | 371 |
Msa1263210 | AT1G73990.2 | 42.404 | 441 | 181 | 12 | 51 | 437 | 84 | 505 | 1.23e-98 | 317 |
Msa1263210 | AT1G31690.1 | 61.017 | 236 | 90 | 2 | 510 | 743 | 425 | 660 | 5.32e-95 | 310 |
Msa1263210 | AT1G31710.1 | 60.504 | 238 | 91 | 2 | 510 | 744 | 428 | 665 | 1.93e-94 | 309 |
Msa1263210 | AT4G14940.1 | 56.962 | 237 | 98 | 2 | 510 | 742 | 413 | 649 | 1.28e-88 | 292 |
Msa1263210 | AT4G12280.1 | 49.606 | 254 | 120 | 2 | 510 | 755 | 40 | 293 | 1.99e-83 | 267 |
Msa1263210 | AT1G31670.1 | 56.000 | 250 | 91 | 5 | 510 | 755 | 502 | 736 | 1.05e-79 | 271 |
Msa1263210 | AT4G12290.1 | 50.394 | 254 | 118 | 2 | 510 | 755 | 481 | 734 | 5.71e-79 | 269 |
Msa1263210 | AT3G43670.1 | 52.743 | 237 | 108 | 3 | 510 | 742 | 438 | 674 | 1.39e-75 | 258 |
Msa1263210 | AT1G62810.1 | 50.000 | 250 | 121 | 3 | 510 | 755 | 457 | 706 | 3.62e-74 | 255 |
Msa1263210 | AT4G12290.2 | 48.691 | 191 | 90 | 2 | 510 | 692 | 481 | 671 | 2.06e-50 | 188 |
Msa1263210 | AT2G42490.1 | 28.992 | 238 | 159 | 6 | 510 | 742 | 511 | 743 | 2.26e-23 | 106 |
Find 156 sgRNAs with CRISPR-Local
Find 373 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGGTAGAGTTGGAAGGGTTT+GGG | 0.196018 | 8_2:-66310008 | None:intergenic |
ATCAGGTATACTTGAAATTA+AGG | 0.224441 | 8_2:+66314825 | Msa1263210:CDS |
TCGTTATGAAAATAATTATT+TGG | 0.230722 | 8_2:+66311271 | Msa1263210:CDS |
GCAGAAAATCTTACTTTAAC+TGG | 0.260840 | 8_2:+66311206 | Msa1263210:CDS |
CTTTCACTAATTATAATGTT+TGG | 0.263537 | 8_2:+66315241 | Msa1263210:CDS |
GTTCAAAGAGAAAGAGTTAT+TGG | 0.263546 | 8_2:+66315028 | Msa1263210:CDS |
GCGGTAGAGTTGGAAGGGTT+TGG | 0.273377 | 8_2:-66310009 | None:intergenic |
GTGCTCAATAGTGGCATTAT+TGG | 0.277998 | 8_2:-66315538 | None:intergenic |
TAGATTATATCTATTCAAAT+TGG | 0.281852 | 8_2:+66310672 | Msa1263210:CDS |
TTTCTCCAAGAGATGTTAAA+TGG | 0.287454 | 8_2:+66315617 | Msa1263210:CDS |
TACCTTGATCTTGATATTGA+TGG | 0.305111 | 8_2:+66314949 | Msa1263210:CDS |
CATGGTTTGGTTGATGCTAT+TGG | 0.306483 | 8_2:+66311440 | Msa1263210:CDS |
AATACTCTAAAGTTAGAAAA+TGG | 0.310927 | 8_2:+66310889 | Msa1263210:CDS |
TAAGCATAAGGATGAGATTA+AGG | 0.314074 | 8_2:+66314858 | Msa1263210:CDS |
GATAAAGTCTCTTCTTCTAT+AGG | 0.319661 | 8_2:+66310698 | Msa1263210:CDS |
CAGGATACACTTGACGAAAA+AGG | 0.330334 | 8_2:+66311376 | Msa1263210:CDS |
CAGGCAATATAATATTCTTT+TGG | 0.345479 | 8_2:-66310449 | None:intergenic |
AGTGGATGAGCTGGAATTGC+TGG | 0.355513 | 8_2:-66315183 | None:intergenic |
TTTCACTAATTATAATGTTT+GGG | 0.361398 | 8_2:+66315242 | Msa1263210:CDS |
ATGAGATGTTGCGTCCTTAC+CGG | 0.374461 | 8_2:-66311420 | None:intergenic |
ATAAAGTCTCTTCTTCTATA+GGG | 0.394710 | 8_2:+66310699 | Msa1263210:CDS |
GTCACCGGTGGGATAATCTT+TGG | 0.395250 | 8_2:-66310081 | None:intergenic |
AGTTGGAAGGGTTTGGGGAT+GGG | 0.397323 | 8_2:-66310002 | None:intergenic |
CCAGGCCATTTAACATCTCT+TGG | 0.400405 | 8_2:-66315622 | None:intergenic |
ATCTCAGATTTCCAGAAATC+AGG | 0.401156 | 8_2:+66310392 | Msa1263210:CDS |
TGCTCAATAGTGGCATTATT+GGG | 0.405334 | 8_2:-66315537 | None:intergenic |
CCATATCGATGGCTCTAAAC+AGG | 0.405653 | 8_2:+66311357 | Msa1263210:CDS |
TGTATACAGATAGCATTATC+AGG | 0.410836 | 8_2:+66314808 | Msa1263210:intron |
AATAGATATAATCTACGAAT+GGG | 0.413127 | 8_2:-66310664 | None:intergenic |
CACCTCCTACACTGTCAATT+CGG | 0.413794 | 8_2:-66311052 | None:intergenic |
TTCCTCTCAAAGAAATTAGT+TGG | 0.418394 | 8_2:-66315577 | None:intergenic |
GAGTTGGAAGGGTTTGGGGA+TGG | 0.418597 | 8_2:-66310003 | None:intergenic |
ATTGGGAAATCTTCTTGTGC+TGG | 0.418903 | 8_2:-66315520 | None:intergenic |
CTCTCTTGAAGGAGAGACTT+GGG | 0.421410 | 8_2:+66310835 | Msa1263210:intron |
GAGAAGACACATTAGCTGTT+TGG | 0.422613 | 8_2:+66315325 | Msa1263210:CDS |
GTGAAAGCACCACGTATTTG+TGG | 0.424101 | 8_2:-66315225 | None:intergenic |
AGGTTGAACATAGGAGGCTT+TGG | 0.431619 | 8_2:+66311396 | Msa1263210:CDS |
TTCACAATTTAAATTGCGGT+TGG | 0.437122 | 8_2:+66310342 | Msa1263210:CDS |
ACTTTAACTGGTTCAATTCG+AGG | 0.438505 | 8_2:+66311218 | Msa1263210:CDS |
GGCAACAAACATTAAGCATA+AGG | 0.444443 | 8_2:+66314846 | Msa1263210:CDS |
CAAGGTAGTAGATGTAGAAA+TGG | 0.454103 | 8_2:-66314933 | None:intergenic |
TCACAATTTAAATTGCGGTT+GGG | 0.456359 | 8_2:+66310343 | Msa1263210:CDS |
TTATATCTATTCAAATTGGC+TGG | 0.458903 | 8_2:+66310676 | Msa1263210:CDS |
TTCTGTAGATGTATCGGAAA+CGG | 0.461057 | 8_2:-66309941 | None:intergenic |
TGAAAATCAATTTGCAAGGT+AGG | 0.463637 | 8_2:+66310201 | Msa1263210:CDS |
GGACGCAACATCTCATGGTT+TGG | 0.466367 | 8_2:+66311427 | Msa1263210:CDS |
CCAAGAGATGTTAAATGGCC+TGG | 0.470595 | 8_2:+66315622 | Msa1263210:CDS |
TGCTTGTTCTGTAGATGTAT+CGG | 0.473757 | 8_2:-66309947 | None:intergenic |
ACATATCGCGATATTAGTGT+TGG | 0.475615 | 8_2:+66310533 | Msa1263210:CDS |
TCATATAGGTCTACGTCAGA+TGG | 0.479078 | 8_2:-66311323 | None:intergenic |
TGAGGCAGAGATAATACATT+GGG | 0.481682 | 8_2:-66310257 | None:intergenic |
TCACCATCACCAACACTAGA+AGG | 0.482098 | 8_2:-66310494 | None:intergenic |
TATTCTCTGAAAGAAATCAT+AGG | 0.484669 | 8_2:-66310870 | None:intergenic |
AGGGTTTGGGGATGGGACGA+AGG | 0.487283 | 8_2:-66309995 | None:intergenic |
TTAACAAATGCAAGTTCACC+TGG | 0.490301 | 8_2:-66315111 | None:intergenic |
AACGAGAAATTTGTTGAAGC+CGG | 0.492222 | 8_2:-66310123 | None:intergenic |
ACTGCCGTTGGTAATGAAGT+TGG | 0.492967 | 8_2:+66315147 | Msa1263210:CDS |
TCAAATCCAGTGCTCAATAG+TGG | 0.493479 | 8_2:-66315547 | None:intergenic |
GGTTGTGCGGTAGAGTTGGA+AGG | 0.493798 | 8_2:-66310015 | None:intergenic |
TTGGGAAATCTTCTTGTGCT+GGG | 0.497563 | 8_2:-66315519 | None:intergenic |
TACTACATGGCAATCGGAGC+AGG | 0.498383 | 8_2:+66311173 | Msa1263210:CDS |
TCAGTTAAAAGTGGATGAGC+TGG | 0.500223 | 8_2:-66315192 | None:intergenic |
GAAATTTGTTGAAGCCGGTA+GGG | 0.500644 | 8_2:-66310118 | None:intergenic |
TACCATCAATATCAAGATCA+AGG | 0.501730 | 8_2:-66314951 | None:intergenic |
GGTAGAGTTGGAAGGGTTTG+GGG | 0.507506 | 8_2:-66310007 | None:intergenic |
GTTGAAAACTTCGTAAATGA+AGG | 0.509871 | 8_2:+66310737 | Msa1263210:CDS |
GGCCTCTGAGGACCGGATGA+TGG | 0.511815 | 8_2:-66310949 | None:intergenic |
TATCATTAAGAAGATTGATA+TGG | 0.511919 | 8_2:+66310995 | Msa1263210:CDS |
CATATAGGTCTACGTCAGAT+GGG | 0.515613 | 8_2:-66311322 | None:intergenic |
AAGAAATTATCGCAAATTTG+AGG | 0.519686 | 8_2:-66310275 | None:intergenic |
GGTGGGATAATCTTTGGCAT+TGG | 0.524626 | 8_2:-66310075 | None:intergenic |
CATTGGGATCACATAATGTA+CGG | 0.525279 | 8_2:-66310241 | None:intergenic |
GGAAGATTTACATGGTACAT+TGG | 0.526693 | 8_2:+66314879 | Msa1263210:CDS |
TCCTCAGAGGCCATGTGTAG+TGG | 0.528805 | 8_2:+66310960 | Msa1263210:CDS |
GCAGGATACTACATGGCAAT+CGG | 0.529995 | 8_2:+66311167 | Msa1263210:CDS |
TACACATGGCCTCTGAGGAC+CGG | 0.532012 | 8_2:-66310956 | None:intergenic |
GGGTTTGGGGATGGGACGAA+GGG | 0.532103 | 8_2:-66309994 | None:intergenic |
AAGAACAAATAGCCATCATC+CGG | 0.533046 | 8_2:+66310937 | Msa1263210:CDS |
GAGTGGTTGTGCGGTAGAGT+TGG | 0.533545 | 8_2:-66310019 | None:intergenic |
TTGGTATCAGCAAACAGCAT+TGG | 0.533948 | 8_2:+66314898 | Msa1263210:CDS |
GGCCAACTAATTTCTTTGAG+AGG | 0.535093 | 8_2:+66315575 | Msa1263210:CDS |
TGGTAGGATCCGCATCATAT+AGG | 0.535748 | 8_2:-66311337 | None:intergenic |
TATATTCACAATTTAAATTG+CGG | 0.538330 | 8_2:+66310338 | Msa1263210:CDS |
ATTGTGATGTGGCATGTAGT+TGG | 0.538927 | 8_2:+66315484 | Msa1263210:CDS |
ATCACAATTGGGCTAGCCCC+AGG | 0.539636 | 8_2:+66315093 | Msa1263210:CDS |
CCTGTTTAGAGCCATCGATA+TGG | 0.540658 | 8_2:-66311357 | None:intergenic |
GTTAGAAAATGGACGGTCGT+TGG | 0.541100 | 8_2:+66310900 | Msa1263210:CDS |
ATCAGACATTGAAGCAATGA+CGG | 0.541219 | 8_2:-66311132 | None:intergenic |
AAATTTGTTGAAGCCGGTAG+GGG | 0.543172 | 8_2:-66310117 | None:intergenic |
GAATAGATATAATCTACGAA+TGG | 0.543568 | 8_2:-66310665 | None:intergenic |
AACTGAGGTAACTGAGGCTG+TGG | 0.544462 | 8_2:-66310565 | None:intergenic |
GTTGTGCGGTAGAGTTGGAA+GGG | 0.544711 | 8_2:-66310014 | None:intergenic |
GATTGCTATAGCAAAATTGA+AGG | 0.545823 | 8_2:+66311478 | Msa1263210:CDS |
TCTGATGTGGCAACAAATGC+AGG | 0.546185 | 8_2:+66311149 | Msa1263210:CDS |
TAATCATCTTCAGTTAAAAG+TGG | 0.547068 | 8_2:-66315201 | None:intergenic |
GGACCTTCTAGTGTTGGTGA+TGG | 0.547576 | 8_2:+66310491 | Msa1263210:CDS |
GAAATCAGGTAAAATTGTTG+TGG | 0.551920 | 8_2:+66310406 | Msa1263210:CDS |
GGTTTGGTTGATGCTATTGG+TGG | 0.557324 | 8_2:+66311443 | Msa1263210:CDS |
TCTAGTGTTGGTGATGGTGA+TGG | 0.562212 | 8_2:+66310497 | Msa1263210:CDS |
TGAGCACTGGATTTGAGTTG+AGG | 0.563016 | 8_2:+66315554 | Msa1263210:CDS |
AGAAATTTGTTGAAGCCGGT+AGG | 0.569002 | 8_2:-66310119 | None:intergenic |
ACTCTCTTGAAGGAGAGACT+TGG | 0.573644 | 8_2:+66310834 | Msa1263210:intron |
TCAGACATTGAAGCAATGAC+GGG | 0.573976 | 8_2:-66311131 | None:intergenic |
TAGGAGGCTTTGGACCGGTA+AGG | 0.575215 | 8_2:+66311406 | Msa1263210:CDS |
ATAATGCCACTATTGAGCAC+TGG | 0.575284 | 8_2:+66315541 | Msa1263210:CDS |
GGTAAGGACGCAACATCTCA+TGG | 0.582602 | 8_2:+66311422 | Msa1263210:CDS |
CAGCTAATGTGTCTTCTCCA+TGG | 0.582688 | 8_2:-66315320 | None:intergenic |
AAATTGGAATGGTTTGAGAG+TGG | 0.587618 | 8_2:-66310036 | None:intergenic |
ACTTGTGACGCCACTACACA+TGG | 0.588718 | 8_2:-66310970 | None:intergenic |
ATTGGGATCACATAATGTAC+GGG | 0.589680 | 8_2:-66310240 | None:intergenic |
GTTTGGTTGATGCTATTGGT+GGG | 0.590597 | 8_2:+66311444 | Msa1263210:CDS |
GAACATAGGAGGCTTTGGAC+CGG | 0.591268 | 8_2:+66311401 | Msa1263210:CDS |
ATCCGAATTGACAGTGTAGG+AGG | 0.594571 | 8_2:+66311050 | Msa1263210:CDS |
GGGTTCGAAATTGAAGTCAC+CGG | 0.594727 | 8_2:-66310096 | None:intergenic |
CTCTAAAGTTAGAAAATGGA+CGG | 0.595035 | 8_2:+66310893 | Msa1263210:CDS |
CGAATTGACAGTGTAGGAGG+TGG | 0.596643 | 8_2:+66311053 | Msa1263210:CDS |
AACAAATGCAGGATACTACA+TGG | 0.600606 | 8_2:+66311160 | Msa1263210:CDS |
CTATATGTTGATCATAGCCA+TGG | 0.600693 | 8_2:+66315303 | Msa1263210:CDS |
TTGAGGCAGAGATAATACAT+TGG | 0.601957 | 8_2:-66310258 | None:intergenic |
AGTAGATGTAGAAATGGTCA+TGG | 0.603707 | 8_2:-66314927 | None:intergenic |
AAGACAGTAAGAATCACTGA+TGG | 0.608281 | 8_2:+66315003 | Msa1263210:CDS |
GCCACTACACATGGCCTCTG+AGG | 0.609668 | 8_2:-66310961 | None:intergenic |
TAACAAATGCAAGTTCACCT+GGG | 0.611982 | 8_2:-66315110 | None:intergenic |
GAGATTAAGGAAGATTTACA+TGG | 0.612657 | 8_2:+66314871 | Msa1263210:CDS |
TGCGGATCCTACCATATCGA+TGG | 0.613747 | 8_2:+66311346 | Msa1263210:CDS |
CTTAGCAGTTTGAGTCTCAG+TGG | 0.614126 | 8_2:-66315052 | None:intergenic |
TTCGAAATTGAAGTCACCGG+TGG | 0.617000 | 8_2:-66310093 | None:intergenic |
TTTAGAGCCATCGATATGGT+AGG | 0.619484 | 8_2:-66311353 | None:intergenic |
AATGCCAAAGATTATCCCAC+CGG | 0.620046 | 8_2:+66310077 | Msa1263210:CDS |
GACGACACTAGCTTTACCAT+GGG | 0.621049 | 8_2:+66310154 | Msa1263210:CDS |
ATTATCCGAATTGACAGTGT+AGG | 0.622266 | 8_2:+66311047 | Msa1263210:CDS |
AGACGACACTAGCTTTACCA+TGG | 0.623059 | 8_2:+66310153 | Msa1263210:CDS |
GTATTGAAAATCAATTTGCA+AGG | 0.625509 | 8_2:+66310197 | Msa1263210:CDS |
GAATAGAGACATTGTGAACA+AGG | 0.629687 | 8_2:+66315459 | Msa1263210:CDS |
GACGGTCGTTGGAATATCAG+AGG | 0.632038 | 8_2:+66310911 | Msa1263210:CDS |
AATTTGTTGAAGCCGGTAGG+GGG | 0.642325 | 8_2:-66310116 | None:intergenic |
CCATGGGAGCGCGTTCAACG+TGG | 0.643795 | 8_2:+66310170 | Msa1263210:CDS |
TCGAAATTGAAGTCACCGGT+GGG | 0.645381 | 8_2:-66310092 | None:intergenic |
CATTGCTTCAATGTCTGATG+TGG | 0.645891 | 8_2:+66311136 | Msa1263210:CDS |
ATGGTTTGAGAGTGGTTGTG+CGG | 0.647680 | 8_2:-66310028 | None:intergenic |
ATATCCAACTTCATTACCAA+CGG | 0.650239 | 8_2:-66315151 | None:intergenic |
GAGGTAACTGAGGCTGTGGA+AGG | 0.656204 | 8_2:-66310561 | None:intergenic |
TCTCTTGAAGGAGAGACTTG+GGG | 0.661025 | 8_2:+66310836 | Msa1263210:intron |
AGCCATCATCCGGTCCTCAG+AGG | 0.663331 | 8_2:+66310947 | Msa1263210:CDS |
TGACGTAGACCTATATGATG+CGG | 0.663953 | 8_2:+66311328 | Msa1263210:CDS |
ATATAGGTCTACGTCAGATG+GGG | 0.676203 | 8_2:-66311321 | None:intergenic |
TAACAAAACTGAGGTAACTG+AGG | 0.679276 | 8_2:-66310571 | None:intergenic |
AACAAATGCAAGTTCACCTG+GGG | 0.686910 | 8_2:-66315109 | None:intergenic |
TCATGCATCTCTATCAACGT+GGG | 0.690792 | 8_2:+66311079 | Msa1263210:CDS |
TTCATGCATCTCTATCAACG+TGG | 0.691171 | 8_2:+66311078 | Msa1263210:CDS |
ATAGATATAATCTACGAATG+GGG | 0.695933 | 8_2:-66310663 | None:intergenic |
AGATATAAAGCAGAAATACG+AGG | 0.711969 | 8_2:-66310314 | None:intergenic |
AAAGACAGCTAACAAAACTG+AGG | 0.713880 | 8_2:-66310580 | None:intergenic |
TGAACAAGGACATTGTGATG+TGG | 0.719496 | 8_2:+66315473 | Msa1263210:CDS |
GATGATTATCCACAAATACG+TGG | 0.754321 | 8_2:+66315216 | Msa1263210:CDS |
GGAAACGGTTAATTGCTGTG+CGG | 0.809135 | 8_2:-66309926 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTAAATTTTAAAATAAAATT+CGG | - | chr8_2:66314392-66314411 | None:intergenic | 0.0% |
!!! | TTTTATACTTTGTAAATAAA+TGG | + | chr8_2:66312433-66312452 | Msa1263210:intron | 10.0% |
!!! | AAATTGTTTTGAAAAATAAA+TGG | - | chr8_2:66313094-66313113 | None:intergenic | 10.0% |
!!! | ATATTTGAAGTAATTTTAAA+AGG | + | chr8_2:66313170-66313189 | Msa1263210:intron | 10.0% |
!! | AAAAAATATGAAATTATTAG+TGG | + | chr8_2:66314185-66314204 | Msa1263210:intron | 10.0% |
!! | TCATATAAAAATATATACAT+TGG | - | chr8_2:66314769-66314788 | None:intergenic | 10.0% |
!! | TATATTCACAATTTAAATTG+CGG | + | chr8_2:66310338-66310357 | Msa1263210:CDS | 15.0% |
!! | TAGATTATATCTATTCAAAT+TGG | + | chr8_2:66310672-66310691 | Msa1263210:CDS | 15.0% |
!! | TCGTTATGAAAATAATTATT+TGG | + | chr8_2:66311271-66311290 | Msa1263210:CDS | 15.0% |
!! | ATCCATCAAAATTTAAAAAT+GGG | - | chr8_2:66312225-66312244 | None:intergenic | 15.0% |
!!! | TAGAATTAATTTTTCAATGT+TGG | + | chr8_2:66312267-66312286 | Msa1263210:intron | 15.0% |
!! | AACAAGGAAAAAAATTATAA+AGG | - | chr8_2:66313495-66313514 | None:intergenic | 15.0% |
!! | TAAAAAAATTATCTCTAACA+CGG | - | chr8_2:66313673-66313692 | None:intergenic | 15.0% |
!!! | ATTATTAGTGGATTAAAATA+AGG | + | chr8_2:66314197-66314216 | Msa1263210:intron | 15.0% |
!! | TCACAATTCATTATTAAAAA+GGG | - | chr8_2:66314674-66314693 | None:intergenic | 15.0% |
!!! | ATGACCATTATTATTTTATA+TGG | + | chr8_2:66314785-66314804 | Msa1263210:intron | 15.0% |
!! | TACACCATATAAAATAATAA+TGG | - | chr8_2:66314792-66314811 | None:intergenic | 15.0% |
!! | TTTCACTAATTATAATGTTT+GGG | + | chr8_2:66315242-66315261 | Msa1263210:CDS | 15.0% |
!! | TTATAATAGAACTGAAAAAT+GGG | + | chr8_2:66315272-66315291 | Msa1263210:CDS | 15.0% |
!!! | ATTTAAGTAATCATACTTTT+TGG | - | chr8_2:66315352-66315371 | None:intergenic | 15.0% |
!! | GATTACTATACTAATTAATT+TGG | + | chr8_2:66315410-66315429 | Msa1263210:intron | 15.0% |
!! | AAGAAGAAAAAAAGTGAAAT+TGG | - | chr8_2:66310055-66310074 | None:intergenic | 20.0% |
!! | AATAGATATAATCTACGAAT+GGG | - | chr8_2:66310667-66310686 | None:intergenic | 20.0% |
!! | AGTAGATAAACTAAAAAATG+AGG | + | chr8_2:66310769-66310788 | Msa1263210:intron | 20.0% |
!! | GTAGATAAACTAAAAAATGA+GGG | + | chr8_2:66310770-66310789 | Msa1263210:intron | 20.0% |
!!! | AATACTCTAAAGTTAGAAAA+TGG | + | chr8_2:66310889-66310908 | Msa1263210:CDS | 20.0% |
!! | TATCATTAAGAAGATTGATA+TGG | + | chr8_2:66310995-66311014 | Msa1263210:CDS | 20.0% |
!! | CATCCATCAAAATTTAAAAA+TGG | - | chr8_2:66312226-66312245 | None:intergenic | 20.0% |
!!! | TGTTGGATTTTGAAAAATTA+AGG | + | chr8_2:66312284-66312303 | Msa1263210:intron | 20.0% |
!! | CATGCATCTTTAATTATAAA+AGG | + | chr8_2:66312334-66312353 | Msa1263210:intron | 20.0% |
!! | GGAGTAAATCAATTTATAAA+TGG | + | chr8_2:66313141-66313160 | Msa1263210:intron | 20.0% |
!! | TAAATCAATTTATAAATGGC+AGG | + | chr8_2:66313145-66313164 | Msa1263210:intron | 20.0% |
!! | GATATGATATGATTAGTAAA+TGG | - | chr8_2:66313381-66313400 | None:intergenic | 20.0% |
!! | GTAATTTCTTTACTATGTTT+AGG | + | chr8_2:66313414-66313433 | Msa1263210:intron | 20.0% |
!! | AAGGAAAAAAATTATAAAGG+AGG | - | chr8_2:66313492-66313511 | None:intergenic | 20.0% |
!! | AAAACAAGAAAAAAACAAGA+CGG | - | chr8_2:66313548-66313567 | None:intergenic | 20.0% |
!! | AAAGTATGTAATTGATTACA+AGG | + | chr8_2:66313801-66313820 | Msa1263210:intron | 20.0% |
!! | GGATTAAAATAAGGTATAAT+AGG | + | chr8_2:66314206-66314225 | Msa1263210:intron | 20.0% |
!!! | TTTTAGTATTTGACAGAAAA+AGG | - | chr8_2:66314426-66314445 | None:intergenic | 20.0% |
!! | CTTTAGACCAAAAAAAAAAA+GGG | - | chr8_2:66314456-66314475 | None:intergenic | 20.0% |
!! | ACTTTAGACCAAAAAAAAAA+AGG | - | chr8_2:66314457-66314476 | None:intergenic | 20.0% |
!!! | AAATTGTTTTTACAGGAAAA+GGG | - | chr8_2:66314647-66314666 | None:intergenic | 20.0% |
!! | CTCACAATTCATTATTAAAA+AGG | - | chr8_2:66314675-66314694 | None:intergenic | 20.0% |
!! | CTTTCACTAATTATAATGTT+TGG | + | chr8_2:66315241-66315260 | Msa1263210:CDS | 20.0% |
!!! | CATTTTTCAGTTCTATTATA+AGG | - | chr8_2:66315273-66315292 | None:intergenic | 20.0% |
!! | CTTATAATAGAACTGAAAAA+TGG | + | chr8_2:66315271-66315290 | Msa1263210:CDS | 20.0% |
!!! | TTAATTTGGACCTTTTTTAA+TGG | + | chr8_2:66315424-66315443 | Msa1263210:intron | 20.0% |
! | GAAAAAAAGTGAAATTGGAA+TGG | - | chr8_2:66310050-66310069 | None:intergenic | 25.0% |
! | GTATTGAAAATCAATTTGCA+AGG | + | chr8_2:66310197-66310216 | Msa1263210:CDS | 25.0% |
! | AAGAAATTATCGCAAATTTG+AGG | - | chr8_2:66310278-66310297 | None:intergenic | 25.0% |
!! | ATTCTTTTGGTAGAATTGTA+GGG | - | chr8_2:66310439-66310458 | None:intergenic | 25.0% |
!! | TATTCTTTTGGTAGAATTGT+AGG | - | chr8_2:66310440-66310459 | None:intergenic | 25.0% |
!! | CAGGCAATATAATATTCTTT+TGG | - | chr8_2:66310452-66310471 | None:intergenic | 25.0% |
! | CAGTCAAAAAGATTTACATA+AGG | - | chr8_2:66310614-66310633 | None:intergenic | 25.0% |
! | ATAGATATAATCTACGAATG+GGG | - | chr8_2:66310666-66310685 | None:intergenic | 25.0% |
! | GAATAGATATAATCTACGAA+TGG | - | chr8_2:66310668-66310687 | None:intergenic | 25.0% |
! | TTATATCTATTCAAATTGGC+TGG | + | chr8_2:66310676-66310695 | Msa1263210:CDS | 25.0% |
! | ATAAAGTCTCTTCTTCTATA+GGG | + | chr8_2:66310699-66310718 | Msa1263210:CDS | 25.0% |
!! | TATTCTCTGAAAGAAATCAT+AGG | - | chr8_2:66310873-66310892 | None:intergenic | 25.0% |
! | CAAAGAGTCAAAAAAAATCA+AGG | + | chr8_2:66311019-66311038 | Msa1263210:CDS | 25.0% |
!! | TATTTTCATAACGATTGTCA+AGG | - | chr8_2:66311265-66311284 | None:intergenic | 25.0% |
! | TTTGTATGATAGAGAATAGA+GGG | + | chr8_2:66311659-66311678 | Msa1263210:intron | 25.0% |
! | AACATTTACAGTTCCTTTAA+TGG | - | chr8_2:66311891-66311910 | None:intergenic | 25.0% |
! | ATTAAAGGAACTGTAAATGT+TGG | + | chr8_2:66311890-66311909 | Msa1263210:intron | 25.0% |
! | ACGAAAAGAATAAGAAGAAA+AGG | + | chr8_2:66311968-66311987 | Msa1263210:intron | 25.0% |
!!! | ATATATAACAGTGCTGATTT+TGG | + | chr8_2:66311993-66312012 | Msa1263210:intron | 25.0% |
! | GATGAACAAAAAAGAGAATT+GGG | - | chr8_2:66312024-66312043 | None:intergenic | 25.0% |
! | AGATGAACAAAAAAGAGAAT+TGG | - | chr8_2:66312025-66312044 | None:intergenic | 25.0% |
!!! | AAAAACACATTTTCAAGTCA+AGG | - | chr8_2:66312142-66312161 | None:intergenic | 25.0% |
!!! | GTCCCATTTTTAAATTTTGA+TGG | + | chr8_2:66312220-66312239 | Msa1263210:intron | 25.0% |
! | TCATATCTACTGAAATCTAT+AGG | + | chr8_2:66312368-66312387 | Msa1263210:intron | 25.0% |
! | AAATTTCCATCTGAATCATT+TGG | + | chr8_2:66312401-66312420 | Msa1263210:intron | 25.0% |
! | GATATAACTCATGAATTTGT+CGG | - | chr8_2:66312603-66312622 | None:intergenic | 25.0% |
! | ACAAATTCATGAGTTATATC+TGG | + | chr8_2:66312603-66312622 | Msa1263210:intron | 25.0% |
!!! | CAAAACAGTTAAAAAGTGTT+TGG | - | chr8_2:66312728-66312747 | None:intergenic | 25.0% |
! | TTACAACAAAACCAGATAAA+GGG | - | chr8_2:66312925-66312944 | None:intergenic | 25.0% |
! | ATTACAACAAAACCAGATAA+AGG | - | chr8_2:66312926-66312945 | None:intergenic | 25.0% |
! | AAATGACAAATGTTCTTTGA+TGG | + | chr8_2:66313304-66313323 | Msa1263210:intron | 25.0% |
! | AGAAATTACAAAGTCAAGTT+AGG | - | chr8_2:66313403-66313422 | None:intergenic | 25.0% |
! | TTTCTTTACTATGTTTAGGT+TGG | + | chr8_2:66313418-66313437 | Msa1263210:intron | 25.0% |
!! | TTCTTTACTATGTTTAGGTT+GGG | + | chr8_2:66313419-66313438 | Msa1263210:intron | 25.0% |
! | AATGTGTCTTTAATCCTATT+AGG | - | chr8_2:66313456-66313475 | None:intergenic | 25.0% |
! | GAAAAAAATTATAAAGGAGG+TGG | - | chr8_2:66313489-66313508 | None:intergenic | 25.0% |
! | GCAAAAAAATAGGAATTTGT+TGG | + | chr8_2:66314094-66314113 | Msa1263210:intron | 25.0% |
! | AAACGACACTTAAAAAGAAA+CGG | + | chr8_2:66314277-66314296 | Msa1263210:intron | 25.0% |
!!! | GTAAGTTCCCTTTTTTTTTT+TGG | + | chr8_2:66314446-66314465 | Msa1263210:intron | 25.0% |
! | CAAAGGAAAATGTCAAATTT+GGG | - | chr8_2:66314550-66314569 | None:intergenic | 25.0% |
! | ACAAAGGAAAATGTCAAATT+TGG | - | chr8_2:66314551-66314570 | None:intergenic | 25.0% |
! | TTGTATCTTTCAATGTTACA+TGG | + | chr8_2:66314604-66314623 | Msa1263210:intron | 25.0% |
!!! | CAAATTGTTTTTACAGGAAA+AGG | - | chr8_2:66314648-66314667 | None:intergenic | 25.0% |
!! | CTTTTCCTGTAAAAACAATT+TGG | + | chr8_2:66314646-66314665 | Msa1263210:intron | 25.0% |
! | ATAATGAATTGTGAGATACA+TGG | + | chr8_2:66314680-66314699 | Msa1263210:intron | 25.0% |
! | ATCAGGTATACTTGAAATTA+AGG | + | chr8_2:66314825-66314844 | Msa1263210:CDS | 25.0% |
! | TAATCATCTTCAGTTAAAAG+TGG | - | chr8_2:66315204-66315223 | None:intergenic | 25.0% |
! | GCAAATGTTTCCATTAAAAA+AGG | - | chr8_2:66315437-66315456 | None:intergenic | 25.0% |
!! | TTTTTAATGGAAACATTTGC+AGG | + | chr8_2:66315437-66315456 | Msa1263210:intron | 25.0% |
TGAAAATCAATTTGCAAGGT+AGG | + | chr8_2:66310201-66310220 | Msa1263210:CDS | 30.0% | |
AGATATAAAGCAGAAATACG+AGG | - | chr8_2:66310317-66310336 | None:intergenic | 30.0% | |
TTCACAATTTAAATTGCGGT+TGG | + | chr8_2:66310342-66310361 | Msa1263210:CDS | 30.0% | |
TCACAATTTAAATTGCGGTT+GGG | + | chr8_2:66310343-66310362 | Msa1263210:CDS | 30.0% | |
! | CAACAATTTTACCTGATTTC+TGG | - | chr8_2:66310406-66310425 | None:intergenic | 30.0% |
GAAATCAGGTAAAATTGTTG+TGG | + | chr8_2:66310406-66310425 | Msa1263210:CDS | 30.0% | |
AAAAATTTCATCACATGCAC+AGG | - | chr8_2:66310471-66310490 | None:intergenic | 30.0% | |
! | TGTGCATGTGATGAAATTTT+TGG | + | chr8_2:66310470-66310489 | Msa1263210:CDS | 30.0% |
!! | GTAAATCTTTTTGACTGTAC+TGG | + | chr8_2:66310617-66310636 | Msa1263210:CDS | 30.0% |
TACTGGAGATAAAAATTACG+AGG | + | chr8_2:66310634-66310653 | Msa1263210:CDS | 30.0% | |
GATAAAGTCTCTTCTTCTAT+AGG | + | chr8_2:66310698-66310717 | Msa1263210:CDS | 30.0% | |
GTTGAAAACTTCGTAAATGA+AGG | + | chr8_2:66310737-66310756 | Msa1263210:CDS | 30.0% | |
!! | CTCTAAAGTTAGAAAATGGA+CGG | + | chr8_2:66310893-66310912 | Msa1263210:CDS | 30.0% |
GCAGAAAATCTTACTTTAAC+TGG | + | chr8_2:66311206-66311225 | Msa1263210:CDS | 30.0% | |
GATTGCTATAGCAAAATTGA+AGG | + | chr8_2:66311478-66311497 | Msa1263210:CDS | 30.0% | |
!!! | TTGTCTGTTTTGAGGTATAT+TGG | - | chr8_2:66311504-66311523 | None:intergenic | 30.0% |
! | ATACTCTACTCATGCTTTTA+AGG | + | chr8_2:66311555-66311574 | Msa1263210:intron | 30.0% |
! | TACTCTACTCATGCTTTTAA+GGG | + | chr8_2:66311556-66311575 | Msa1263210:intron | 30.0% |
GTTTGTATGATAGAGAATAG+AGG | + | chr8_2:66311658-66311677 | Msa1263210:intron | 30.0% | |
TTTGTGGTGTAAGATGTTTA+CGG | + | chr8_2:66311729-66311748 | Msa1263210:intron | 30.0% | |
!!! | ATGAAATTTTTGAAGCCGTT+GGG | + | chr8_2:66311778-66311797 | Msa1263210:intron | 30.0% |
ATATTCGAGAAATGGAGATA+AGG | + | chr8_2:66311801-66311820 | Msa1263210:intron | 30.0% | |
AATTAGCCAAATGATTCAGA+TGG | - | chr8_2:66312410-66312429 | None:intergenic | 30.0% | |
!! | TGTTTTGTTATCTTTCTTCC+AGG | + | chr8_2:66312494-66312513 | Msa1263210:intron | 30.0% |
!! | GTTTTGTTATCTTTCTTCCA+GGG | + | chr8_2:66312495-66312514 | Msa1263210:intron | 30.0% |
GCTCATTTACAACGTTAATT+TGG | - | chr8_2:66312542-66312561 | None:intergenic | 30.0% | |
ACAATGGCTGAAATATATGA+AGG | + | chr8_2:66312853-66312872 | Msa1263210:intron | 30.0% | |
CAATGGCTGAAATATATGAA+GGG | + | chr8_2:66312854-66312873 | Msa1263210:intron | 30.0% | |
AATGGCTGAAATATATGAAG+GGG | + | chr8_2:66312855-66312874 | Msa1263210:intron | 30.0% | |
GTAATGTGATATGAATCAAG+AGG | - | chr8_2:66312965-66312984 | None:intergenic | 30.0% | |
!! | TACACTTTTTAAATGACACG+CGG | - | chr8_2:66314323-66314342 | None:intergenic | 30.0% |
GACAAAGGATATGTCAAATT+GGG | - | chr8_2:66314740-66314759 | None:intergenic | 30.0% | |
AGACAAAGGATATGTCAAAT+TGG | - | chr8_2:66314741-66314760 | None:intergenic | 30.0% | |
ATACATTGGAGTTTAGACAA+AGG | - | chr8_2:66314755-66314774 | None:intergenic | 30.0% | |
TGTATACAGATAGCATTATC+AGG | + | chr8_2:66314808-66314827 | Msa1263210:intron | 30.0% | |
TAAGCATAAGGATGAGATTA+AGG | + | chr8_2:66314858-66314877 | Msa1263210:CDS | 30.0% | |
GAGATTAAGGAAGATTTACA+TGG | + | chr8_2:66314871-66314890 | Msa1263210:CDS | 30.0% | |
TACCTTGATCTTGATATTGA+TGG | + | chr8_2:66314949-66314968 | Msa1263210:CDS | 30.0% | |
TACCATCAATATCAAGATCA+AGG | - | chr8_2:66314954-66314973 | None:intergenic | 30.0% | |
GTTCAAAGAGAAAGAGTTAT+TGG | + | chr8_2:66315028-66315047 | Msa1263210:CDS | 30.0% | |
TCTGATGCAAAAATCACAAT+TGG | + | chr8_2:66315081-66315100 | Msa1263210:CDS | 30.0% | |
CTGATGCAAAAATCACAATT+GGG | + | chr8_2:66315082-66315101 | Msa1263210:CDS | 30.0% | |
ATATCCAACTTCATTACCAA+CGG | - | chr8_2:66315154-66315173 | None:intergenic | 30.0% | |
TTCCTCTCAAAGAAATTAGT+TGG | - | chr8_2:66315580-66315599 | None:intergenic | 30.0% | |
TTTCTCCAAGAGATGTTAAA+TGG | + | chr8_2:66315617-66315636 | Msa1263210:CDS | 30.0% | |
TTCTGTAGATGTATCGGAAA+CGG | - | chr8_2:66309944-66309963 | None:intergenic | 35.0% | |
TGCTTGTTCTGTAGATGTAT+CGG | - | chr8_2:66309950-66309969 | None:intergenic | 35.0% | |
AAATTGGAATGGTTTGAGAG+TGG | - | chr8_2:66310039-66310058 | None:intergenic | 35.0% | |
!! | AACGAGAAATTTGTTGAAGC+CGG | - | chr8_2:66310126-66310145 | None:intergenic | 35.0% |
ATTGGGATCACATAATGTAC+GGG | - | chr8_2:66310243-66310262 | None:intergenic | 35.0% | |
CATTGGGATCACATAATGTA+CGG | - | chr8_2:66310244-66310263 | None:intergenic | 35.0% | |
TGAGGCAGAGATAATACATT+GGG | - | chr8_2:66310260-66310279 | None:intergenic | 35.0% | |
TTGAGGCAGAGATAATACAT+TGG | - | chr8_2:66310261-66310280 | None:intergenic | 35.0% | |
ATCTCAGATTTCCAGAAATC+AGG | + | chr8_2:66310392-66310411 | Msa1263210:CDS | 35.0% | |
!! | ATTTTTGGACCTTCTAGTGT+TGG | + | chr8_2:66310485-66310504 | Msa1263210:CDS | 35.0% |
ACATATCGCGATATTAGTGT+TGG | + | chr8_2:66310533-66310552 | Msa1263210:CDS | 35.0% | |
TAACAAAACTGAGGTAACTG+AGG | - | chr8_2:66310574-66310593 | None:intergenic | 35.0% | |
AAAGACAGCTAACAAAACTG+AGG | - | chr8_2:66310583-66310602 | None:intergenic | 35.0% | |
AAGAACAAATAGCCATCATC+CGG | + | chr8_2:66310937-66310956 | Msa1263210:CDS | 35.0% | |
ATTATCCGAATTGACAGTGT+AGG | + | chr8_2:66311047-66311066 | Msa1263210:CDS | 35.0% | |
ATCAGACATTGAAGCAATGA+CGG | - | chr8_2:66311135-66311154 | None:intergenic | 35.0% | |
AACAAATGCAGGATACTACA+TGG | + | chr8_2:66311160-66311179 | Msa1263210:CDS | 35.0% | |
! | AGTAAGATTTTCTGCTACGA+TGG | - | chr8_2:66311201-66311220 | None:intergenic | 35.0% |
! | ACTTTAACTGGTTCAATTCG+AGG | + | chr8_2:66311218-66311237 | Msa1263210:CDS | 35.0% |
TGACGAAAAAGGTTGAACAT+AGG | + | chr8_2:66311387-66311406 | Msa1263210:CDS | 35.0% | |
!! | ACAGTAACTTGTCTGTTTTG+AGG | - | chr8_2:66311512-66311531 | None:intergenic | 35.0% |
AAACAGACAAGTTACTGTTG+TGG | + | chr8_2:66311514-66311533 | Msa1263210:intron | 35.0% | |
! | ACTCTACTCATGCTTTTAAG+GGG | + | chr8_2:66311557-66311576 | Msa1263210:intron | 35.0% |
GGTATTAGCTATACTCTCAT+TGG | + | chr8_2:66311578-66311597 | Msa1263210:intron | 35.0% | |
ATAGAGAATAGAGGGAATGA+TGG | + | chr8_2:66311667-66311686 | Msa1263210:intron | 35.0% | |
!! | GAATGATGGATCTGATGTTT+GGG | + | chr8_2:66311681-66311700 | Msa1263210:intron | 35.0% |
AGTATGTATCACGTGATTTG+TGG | + | chr8_2:66311713-66311732 | Msa1263210:intron | 35.0% | |
!!! | GATGAAATTTTTGAAGCCGT+TGG | + | chr8_2:66311777-66311796 | Msa1263210:intron | 35.0% |
! | TGTGAGTTGAGTTAGGATTT+CGG | + | chr8_2:66311853-66311872 | Msa1263210:intron | 35.0% |
!! | ACAGTTCCTTTAATGGACTT+GGG | - | chr8_2:66311884-66311903 | None:intergenic | 35.0% |
!! | TACAGTTCCTTTAATGGACT+TGG | - | chr8_2:66311885-66311904 | None:intergenic | 35.0% |
TCATCAAACTAGGTTTGACA+AGG | - | chr8_2:66311919-66311938 | None:intergenic | 35.0% | |
CTTTGACTCATCATCAAACT+AGG | - | chr8_2:66311929-66311948 | None:intergenic | 35.0% | |
AAAAGTAGTGCCTGATAGAA+GGG | + | chr8_2:66312193-66312212 | Msa1263210:intron | 35.0% | |
! | CAACGTTAATTTGGATCCTT+TGG | - | chr8_2:66312533-66312552 | None:intergenic | 35.0% |
ATGAGCACAAAAAGAGAGAA+TGG | + | chr8_2:66312556-66312575 | Msa1263210:intron | 35.0% | |
!! | GTCAAGGCGAATTTTAGTAT+CGG | - | chr8_2:66312633-66312652 | None:intergenic | 35.0% |
CATGAGTTATATCTGGTTGA+CGG | + | chr8_2:66312610-66312629 | Msa1263210:intron | 35.0% | |
ATTCATAGCAATACAAGGGA+GGG | - | chr8_2:66312767-66312786 | None:intergenic | 35.0% | |
GCAGATTCATAGCAATACAA+GGG | - | chr8_2:66312771-66312790 | None:intergenic | 35.0% | |
TGCAGATTCATAGCAATACA+AGG | - | chr8_2:66312772-66312791 | None:intergenic | 35.0% | |
CATATATTTCAGCCATTGTC+AGG | - | chr8_2:66312852-66312871 | None:intergenic | 35.0% | |
ATGTGATATGAATCAAGAGG+AGG | - | chr8_2:66312962-66312981 | None:intergenic | 35.0% | |
GGGTTAGAAACTAACCTAAT+AGG | + | chr8_2:66313439-66313458 | Msa1263210:intron | 35.0% | |
TTGACACCTGCACAAAAAAT+GGG | - | chr8_2:66313640-66313659 | None:intergenic | 35.0% | |
ATTGACACCTGCACAAAAAA+TGG | - | chr8_2:66313641-66313660 | None:intergenic | 35.0% | |
!!! | TTTTTTGTGCAGGTGTCAAT+TGG | + | chr8_2:66313641-66313660 | Msa1263210:intron | 35.0% |
TAAACAAACCAAGTGCTCAT+AGG | + | chr8_2:66313714-66313733 | Msa1263210:intron | 35.0% | |
ACTTATAACCTATGAGCACT+TGG | - | chr8_2:66313725-66313744 | None:intergenic | 35.0% | |
GATAAAGCGCGCAAAAAAAT+AGG | + | chr8_2:66314084-66314103 | Msa1263210:intron | 35.0% | |
GACACTTAAAAAGAAACGGA+GGG | + | chr8_2:66314281-66314300 | Msa1263210:intron | 35.0% | |
GTCGCGATTCATTATTAGAA+GGG | - | chr8_2:66314481-66314500 | None:intergenic | 35.0% | |
TGTCGCGATTCATTATTAGA+AGG | - | chr8_2:66314482-66314501 | None:intergenic | 35.0% | |
AGTAGTTGGAGTTTAGACAA+AGG | - | chr8_2:66314567-66314586 | None:intergenic | 35.0% | |
!!! | CTCCAACTACTTTGCTTTTT+CGG | + | chr8_2:66314576-66314595 | Msa1263210:intron | 35.0% |
AACCGAAAAAGCAAAGTAGT+TGG | - | chr8_2:66314581-66314600 | None:intergenic | 35.0% | |
!!! | GGGAACCAAATTGTTTTTAC+AGG | - | chr8_2:66314654-66314673 | None:intergenic | 35.0% |
GGCAACAAACATTAAGCATA+AGG | + | chr8_2:66314846-66314865 | Msa1263210:CDS | 35.0% | |
GGAAGATTTACATGGTACAT+TGG | + | chr8_2:66314879-66314898 | Msa1263210:CDS | 35.0% | |
AGTAGATGTAGAAATGGTCA+TGG | - | chr8_2:66314930-66314949 | None:intergenic | 35.0% | |
CAAGGTAGTAGATGTAGAAA+TGG | - | chr8_2:66314936-66314955 | None:intergenic | 35.0% | |
AAGACAGTAAGAATCACTGA+TGG | + | chr8_2:66315003-66315022 | Msa1263210:CDS | 35.0% | |
TAACAAATGCAAGTTCACCT+GGG | - | chr8_2:66315113-66315132 | None:intergenic | 35.0% | |
TTAACAAATGCAAGTTCACC+TGG | - | chr8_2:66315114-66315133 | None:intergenic | 35.0% | |
GATGATTATCCACAAATACG+TGG | + | chr8_2:66315216-66315235 | Msa1263210:CDS | 35.0% | |
AATAGAACTGAAAAATGGGC+TGG | + | chr8_2:66315276-66315295 | Msa1263210:CDS | 35.0% | |
CTATATGTTGATCATAGCCA+TGG | + | chr8_2:66315303-66315322 | Msa1263210:CDS | 35.0% | |
GAATAGAGACATTGTGAACA+AGG | + | chr8_2:66315459-66315478 | Msa1263210:CDS | 35.0% | |
TGCTCAATAGTGGCATTATT+GGG | - | chr8_2:66315540-66315559 | None:intergenic | 35.0% | |
!!! | GGAGAAAGTGTTTTAAGAAC+AGG | - | chr8_2:66315604-66315623 | None:intergenic | 35.0% |
AATGCCAAAGATTATCCCAC+CGG | + | chr8_2:66310077-66310096 | Msa1263210:CDS | 40.0% | |
!! | AAATTTGTTGAAGCCGGTAG+GGG | - | chr8_2:66310120-66310139 | None:intergenic | 40.0% |
!! | GAAATTTGTTGAAGCCGGTA+GGG | - | chr8_2:66310121-66310140 | None:intergenic | 40.0% |
!! | AGAAATTTGTTGAAGCCGGT+AGG | - | chr8_2:66310122-66310141 | None:intergenic | 40.0% |
TTCATGCATCTCTATCAACG+TGG | + | chr8_2:66311078-66311097 | Msa1263210:CDS | 40.0% | |
TCATGCATCTCTATCAACGT+GGG | + | chr8_2:66311079-66311098 | Msa1263210:CDS | 40.0% | |
!!! | TGAAGCAATGACGGGTTTTT+CGG | - | chr8_2:66311126-66311145 | None:intergenic | 40.0% |
TCAGACATTGAAGCAATGAC+GGG | - | chr8_2:66311134-66311153 | None:intergenic | 40.0% | |
CATTGCTTCAATGTCTGATG+TGG | + | chr8_2:66311136-66311155 | Msa1263210:CDS | 40.0% | |
ATATAGGTCTACGTCAGATG+GGG | - | chr8_2:66311324-66311343 | None:intergenic | 40.0% | |
CATATAGGTCTACGTCAGAT+GGG | - | chr8_2:66311325-66311344 | None:intergenic | 40.0% | |
TCATATAGGTCTACGTCAGA+TGG | - | chr8_2:66311326-66311345 | None:intergenic | 40.0% | |
TGACGTAGACCTATATGATG+CGG | + | chr8_2:66311328-66311347 | Msa1263210:CDS | 40.0% | |
! | TTTAGAGCCATCGATATGGT+AGG | - | chr8_2:66311356-66311375 | None:intergenic | 40.0% |
CAGGATACACTTGACGAAAA+AGG | + | chr8_2:66311376-66311395 | Msa1263210:CDS | 40.0% | |
CGAAAAAGGTTGAACATAGG+AGG | + | chr8_2:66311390-66311409 | Msa1263210:CDS | 40.0% | |
!! | CATGGTTTGGTTGATGCTAT+TGG | + | chr8_2:66311440-66311459 | Msa1263210:CDS | 40.0% |
! | GTTTGGTTGATGCTATTGGT+GGG | + | chr8_2:66311444-66311463 | Msa1263210:CDS | 40.0% |
AAGCATGAGTAGAGTATGAC+CGG | - | chr8_2:66311552-66311571 | None:intergenic | 40.0% | |
!! | GGAATGATGGATCTGATGTT+TGG | + | chr8_2:66311680-66311699 | Msa1263210:intron | 40.0% |
CCATTTCTCGAATATCCCAA+CGG | - | chr8_2:66311796-66311815 | None:intergenic | 40.0% | |
! | GAAGCTATGTGAGTTGAGTT+AGG | + | chr8_2:66311846-66311865 | Msa1263210:intron | 40.0% |
! | GTGAGTTGAGTTAGGATTTC+GGG | + | chr8_2:66311854-66311873 | Msa1263210:intron | 40.0% |
GGAATACCCAAGTCCATTAA+AGG | + | chr8_2:66311875-66311894 | Msa1263210:intron | 40.0% | |
!! | TCAGGCACTACTTTTCTTTC+TGG | - | chr8_2:66312188-66312207 | None:intergenic | 40.0% |
GAAAAGTAGTGCCTGATAGA+AGG | + | chr8_2:66312192-66312211 | Msa1263210:intron | 40.0% | |
AGAAAGATCACACAAAGACG+AGG | - | chr8_2:66312460-66312479 | None:intergenic | 40.0% | |
GAATGGCATACAACTGAAAC+TGG | + | chr8_2:66312573-66312592 | Msa1263210:intron | 40.0% | |
CTAAAATTCGCCTTGACTCA+TGG | + | chr8_2:66312636-66312655 | Msa1263210:intron | 40.0% | |
ATAACTCATGCCATGAGTCA+AGG | - | chr8_2:66312649-66312668 | None:intergenic | 40.0% | |
CTCATGGCATGAGTTATATC+TGG | + | chr8_2:66312652-66312671 | Msa1263210:intron | 40.0% | |
GATTCATAGCAATACAAGGG+AGG | - | chr8_2:66312768-66312787 | None:intergenic | 40.0% | |
!!! | TCTGCACCTTTTGTTTTCTC+AGG | + | chr8_2:66312786-66312805 | Msa1263210:intron | 40.0% |
!!! | CTGCACCTTTTGTTTTCTCA+GGG | + | chr8_2:66312787-66312806 | Msa1263210:intron | 40.0% |
TTCGACCCTGAGAAAACAAA+AGG | - | chr8_2:66312795-66312814 | None:intergenic | 40.0% | |
!! | TTTGTTTTCTCAGGGTCGAA+CGG | + | chr8_2:66312795-66312814 | Msa1263210:intron | 40.0% |
AACAAAACCAGATAAAGGGC+AGG | - | chr8_2:66312921-66312940 | None:intergenic | 40.0% | |
!! | AGCGAATCGATTTGTACACA+AGG | + | chr8_2:66313120-66313139 | Msa1263210:intron | 40.0% |
GGAAACATTGAGAATCGCAT+AGG | - | chr8_2:66313527-66313546 | None:intergenic | 40.0% | |
!!! | CAGAAACCCATTTTTTGTGC+AGG | + | chr8_2:66313631-66313650 | Msa1263210:intron | 40.0% |
CGACACTTAAAAAGAAACGG+AGG | + | chr8_2:66314280-66314299 | Msa1263210:intron | 40.0% | |
CAGACCAAGAAAAAAGCAAG+CGG | + | chr8_2:66314524-66314543 | Msa1263210:intron | 40.0% | |
AAATTGGGCTGCATATGTCT+TGG | - | chr8_2:66314725-66314744 | None:intergenic | 40.0% | |
AACAAATGCAAGTTCACCTG+GGG | - | chr8_2:66315112-66315131 | None:intergenic | 40.0% | |
!!! | CCAACGGCAGTTTTTTTGTT+TGG | - | chr8_2:66315138-66315157 | None:intergenic | 40.0% |
CCAAACAAAAAAACTGCCGT+TGG | + | chr8_2:66315135-66315154 | Msa1263210:CDS | 40.0% | |
TCAGTTAAAAGTGGATGAGC+TGG | - | chr8_2:66315195-66315214 | None:intergenic | 40.0% | |
GAGAAGACACATTAGCTGTT+TGG | + | chr8_2:66315325-66315344 | Msa1263210:CDS | 40.0% | |
TGAACAAGGACATTGTGATG+TGG | + | chr8_2:66315473-66315492 | Msa1263210:CDS | 40.0% | |
ATTGTGATGTGGCATGTAGT+TGG | + | chr8_2:66315484-66315503 | Msa1263210:CDS | 40.0% | |
TTGGGAAATCTTCTTGTGCT+GGG | - | chr8_2:66315522-66315541 | None:intergenic | 40.0% | |
ATTGGGAAATCTTCTTGTGC+TGG | - | chr8_2:66315523-66315542 | None:intergenic | 40.0% | |
GTGCTCAATAGTGGCATTAT+TGG | - | chr8_2:66315541-66315560 | None:intergenic | 40.0% | |
ATAATGCCACTATTGAGCAC+TGG | + | chr8_2:66315541-66315560 | Msa1263210:CDS | 40.0% | |
TCAAATCCAGTGCTCAATAG+TGG | - | chr8_2:66315550-66315569 | None:intergenic | 40.0% | |
GGCCAACTAATTTCTTTGAG+AGG | + | chr8_2:66315575-66315594 | Msa1263210:CDS | 40.0% | |
GGAAACGGTTAATTGCTGTG+CGG | - | chr8_2:66309929-66309948 | None:intergenic | 45.0% | |
CGAAGGGATAAAAAACGTGG+TGG | - | chr8_2:66309981-66310000 | None:intergenic | 45.0% | |
GGACGAAGGGATAAAAAACG+TGG | - | chr8_2:66309984-66310003 | None:intergenic | 45.0% | |
ATGGTTTGAGAGTGGTTGTG+CGG | - | chr8_2:66310031-66310050 | None:intergenic | 45.0% | |
GGTGGGATAATCTTTGGCAT+TGG | - | chr8_2:66310078-66310097 | None:intergenic | 45.0% | |
TCGAAATTGAAGTCACCGGT+GGG | - | chr8_2:66310095-66310114 | None:intergenic | 45.0% | |
TTCGAAATTGAAGTCACCGG+TGG | - | chr8_2:66310096-66310115 | None:intergenic | 45.0% | |
GGGTTCGAAATTGAAGTCAC+CGG | - | chr8_2:66310099-66310118 | None:intergenic | 45.0% | |
TTCAATTTCGAACCCCCTAC+CGG | + | chr8_2:66310104-66310123 | Msa1263210:CDS | 45.0% | |
!! | AATTTGTTGAAGCCGGTAGG+GGG | - | chr8_2:66310119-66310138 | None:intergenic | 45.0% |
!! | AGACGACACTAGCTTTACCA+TGG | + | chr8_2:66310153-66310172 | Msa1263210:CDS | 45.0% |
!! | GACGACACTAGCTTTACCAT+GGG | + | chr8_2:66310154-66310173 | Msa1263210:CDS | 45.0% |
TCACCATCACCAACACTAGA+AGG | - | chr8_2:66310497-66310516 | None:intergenic | 45.0% | |
!! | TCTAGTGTTGGTGATGGTGA+TGG | + | chr8_2:66310497-66310516 | Msa1263210:CDS | 45.0% |
TGACGTTACCACTCTCTTGA+AGG | + | chr8_2:66310824-66310843 | Msa1263210:intron | 45.0% | |
AAGTCTCTCCTTCAAGAGAG+TGG | - | chr8_2:66310835-66310854 | None:intergenic | 45.0% | |
ACTCTCTTGAAGGAGAGACT+TGG | + | chr8_2:66310834-66310853 | Msa1263210:intron | 45.0% | |
CTCTCTTGAAGGAGAGACTT+GGG | + | chr8_2:66310835-66310854 | Msa1263210:intron | 45.0% | |
TCTCTTGAAGGAGAGACTTG+GGG | + | chr8_2:66310836-66310855 | Msa1263210:intron | 45.0% | |
GTTAGAAAATGGACGGTCGT+TGG | + | chr8_2:66310900-66310919 | Msa1263210:CDS | 45.0% | |
ATCCGAATTGACAGTGTAGG+AGG | + | chr8_2:66311050-66311069 | Msa1263210:CDS | 45.0% | |
CACCTCCTACACTGTCAATT+CGG | - | chr8_2:66311055-66311074 | None:intergenic | 45.0% | |
TCTGATGTGGCAACAAATGC+AGG | + | chr8_2:66311149-66311168 | Msa1263210:CDS | 45.0% | |
GCAGGATACTACATGGCAAT+CGG | + | chr8_2:66311167-66311186 | Msa1263210:CDS | 45.0% | |
TGGTAGGATCCGCATCATAT+AGG | - | chr8_2:66311340-66311359 | None:intergenic | 45.0% | |
! | CCTGTTTAGAGCCATCGATA+TGG | - | chr8_2:66311360-66311379 | None:intergenic | 45.0% |
!! | CCATATCGATGGCTCTAAAC+AGG | + | chr8_2:66311357-66311376 | Msa1263210:CDS | 45.0% |
AGGTTGAACATAGGAGGCTT+TGG | + | chr8_2:66311396-66311415 | Msa1263210:CDS | 45.0% | |
ATGAGATGTTGCGTCCTTAC+CGG | - | chr8_2:66311423-66311442 | None:intergenic | 45.0% | |
! | GGTTTGGTTGATGCTATTGG+TGG | + | chr8_2:66311443-66311462 | Msa1263210:CDS | 45.0% |
TGGAGATCACTAACCACTTG+TGG | + | chr8_2:66311598-66311617 | Msa1263210:intron | 45.0% | |
CACTAACCACTTGTGGTGTA+AGG | + | chr8_2:66311605-66311624 | Msa1263210:intron | 45.0% | |
GTGGTGTAAGATGTTTACGG+TGG | + | chr8_2:66311732-66311751 | Msa1263210:intron | 45.0% | |
CCGTTGGGATATTCGAGAAA+TGG | + | chr8_2:66311793-66311812 | Msa1263210:intron | 45.0% | |
TAGTGCCTGATAGAAGGGTA+TGG | + | chr8_2:66312198-66312217 | Msa1263210:intron | 45.0% | |
! | TGGTTGACGGATATTTGCCT+TGG | + | chr8_2:66312672-66312691 | Msa1263210:intron | 45.0% |
GATATTTGCCTTGGCTCACT+GGG | + | chr8_2:66312681-66312700 | Msa1263210:intron | 45.0% | |
! | TTGTTTTCTCAGGGTCGAAC+GGG | + | chr8_2:66312796-66312815 | Msa1263210:intron | 45.0% |
AAAACCAGATAAAGGGCAGG+CGG | - | chr8_2:66312918-66312937 | None:intergenic | 45.0% | |
CATTGAGAATCGCATAGGCA+AGG | - | chr8_2:66313522-66313541 | None:intergenic | 45.0% | |
AGATCACATCAGCGTGTGTT+TGG | + | chr8_2:66313593-66313612 | Msa1263210:intron | 45.0% | |
CTTAGCAGTTTGAGTCTCAG+TGG | - | chr8_2:66315055-66315074 | None:intergenic | 45.0% | |
!! | ACTGCCGTTGGTAATGAAGT+TGG | + | chr8_2:66315147-66315166 | Msa1263210:CDS | 45.0% |
!! | GTGAAAGCACCACGTATTTG+TGG | - | chr8_2:66315228-66315247 | None:intergenic | 45.0% |
!! | AGAACTGAAAAATGGGCTGG+TGG | + | chr8_2:66315279-66315298 | Msa1263210:CDS | 45.0% |
CAGCTAATGTGTCTTCTCCA+TGG | - | chr8_2:66315323-66315342 | None:intergenic | 45.0% | |
!! | TGAGCACTGGATTTGAGTTG+AGG | + | chr8_2:66315554-66315573 | Msa1263210:CDS | 45.0% |
CCAGGCCATTTAACATCTCT+TGG | - | chr8_2:66315625-66315644 | None:intergenic | 45.0% | |
CCAAGAGATGTTAAATGGCC+TGG | + | chr8_2:66315622-66315641 | Msa1263210:CDS | 45.0% | |
!!! | ATTCATTTTTAAAAAATAAA+TGG | - | chr8_2:66313047-66313066 | None:intergenic | 5.0% |
!! | TAAGATATAAATATAATAAT+AGG | - | chr8_2:66313956-66313975 | None:intergenic | 5.0% |
AACGGTTAATTGCTGTGCGG+TGG | - | chr8_2:66309926-66309945 | None:intergenic | 50.0% | |
AGTTGGAAGGGTTTGGGGAT+GGG | - | chr8_2:66310005-66310024 | None:intergenic | 50.0% | |
GGTAGAGTTGGAAGGGTTTG+GGG | - | chr8_2:66310010-66310029 | None:intergenic | 50.0% | |
CGGTAGAGTTGGAAGGGTTT+GGG | - | chr8_2:66310011-66310030 | None:intergenic | 50.0% | |
GTTGTGCGGTAGAGTTGGAA+GGG | - | chr8_2:66310017-66310036 | None:intergenic | 50.0% | |
GTCACCGGTGGGATAATCTT+TGG | - | chr8_2:66310084-66310103 | None:intergenic | 50.0% | |
!! | GGACCTTCTAGTGTTGGTGA+TGG | + | chr8_2:66310491-66310510 | Msa1263210:CDS | 50.0% |
AACTGAGGTAACTGAGGCTG+TGG | - | chr8_2:66310568-66310587 | None:intergenic | 50.0% | |
GACGGTCGTTGGAATATCAG+AGG | + | chr8_2:66310911-66310930 | Msa1263210:CDS | 50.0% | |
ACTTGTGACGCCACTACACA+TGG | - | chr8_2:66310973-66310992 | None:intergenic | 50.0% | |
CGAATTGACAGTGTAGGAGG+TGG | + | chr8_2:66311053-66311072 | Msa1263210:CDS | 50.0% | |
TACTACATGGCAATCGGAGC+AGG | + | chr8_2:66311173-66311192 | Msa1263210:CDS | 50.0% | |
TGCGGATCCTACCATATCGA+TGG | + | chr8_2:66311346-66311365 | Msa1263210:CDS | 50.0% | |
!! | GAACATAGGAGGCTTTGGAC+CGG | + | chr8_2:66311401-66311420 | Msa1263210:CDS | 50.0% |
GGTAAGGACGCAACATCTCA+TGG | + | chr8_2:66311422-66311441 | Msa1263210:CDS | 50.0% | |
GGACGCAACATCTCATGGTT+TGG | + | chr8_2:66311427-66311446 | Msa1263210:CDS | 50.0% | |
GTTGTGGAGCTCTCATGATC+CGG | + | chr8_2:66311530-66311549 | Msa1263210:intron | 50.0% | |
CCACATCCTTACACCACAAG+TGG | - | chr8_2:66311614-66311633 | None:intergenic | 50.0% | |
CCACTTGTGGTGTAAGGATG+TGG | + | chr8_2:66311611-66311630 | Msa1263210:intron | 50.0% | |
TGGGACCATACCCTTCTATC+AGG | - | chr8_2:66312206-66312225 | None:intergenic | 50.0% | |
TTTGGACAAGAAGTCGTCCC+TGG | - | chr8_2:66312515-66312534 | None:intergenic | 50.0% | |
AGGGACGACTTCTTGTCCAA+AGG | + | chr8_2:66312514-66312533 | Msa1263210:intron | 50.0% | |
GGATATTTGCCTTGGCTCAC+TGG | + | chr8_2:66312680-66312699 | Msa1263210:intron | 50.0% | |
TCGTGCAACACTCCTGACAA+TGG | + | chr8_2:66312837-66312856 | Msa1263210:intron | 50.0% | |
GCATAGGCAAGGCAACAACA+AGG | - | chr8_2:66313511-66313530 | None:intergenic | 50.0% | |
!!! | TGGGCCGCTTGCTTTTTTCT+TGG | - | chr8_2:66314531-66314550 | None:intergenic | 50.0% |
AGTGGATGAGCTGGAATTGC+TGG | - | chr8_2:66315186-66315205 | None:intergenic | 50.0% | |
GAGTTGGAAGGGTTTGGGGA+TGG | - | chr8_2:66310006-66310025 | None:intergenic | 55.0% | |
GCGGTAGAGTTGGAAGGGTT+TGG | - | chr8_2:66310012-66310031 | None:intergenic | 55.0% | |
GGTTGTGCGGTAGAGTTGGA+AGG | - | chr8_2:66310018-66310037 | None:intergenic | 55.0% | |
GAGTGGTTGTGCGGTAGAGT+TGG | - | chr8_2:66310022-66310041 | None:intergenic | 55.0% | |
GAGGTAACTGAGGCTGTGGA+AGG | - | chr8_2:66310564-66310583 | None:intergenic | 55.0% | |
! | TACACATGGCCTCTGAGGAC+CGG | - | chr8_2:66310959-66310978 | None:intergenic | 55.0% |
TCCTCAGAGGCCATGTGTAG+TGG | + | chr8_2:66310960-66310979 | Msa1263210:CDS | 55.0% | |
!! | TAGGAGGCTTTGGACCGGTA+AGG | + | chr8_2:66311406-66311425 | Msa1263210:CDS | 55.0% |
AAGGATGTGGCGTTGTTGCG+AGG | + | chr8_2:66311624-66311643 | Msa1263210:intron | 55.0% | |
AGGATGTGGCGTTGTTGCGA+GGG | + | chr8_2:66311625-66311644 | Msa1263210:intron | 55.0% | |
CAACTCTTCCCAGTGAGCCA+AGG | - | chr8_2:66312692-66312711 | None:intergenic | 55.0% | |
CTTGGCTCACTGGGAAGAGT+TGG | + | chr8_2:66312690-66312709 | Msa1263210:intron | 55.0% | |
AGGGTCGAACGGGAACACAA+AGG | + | chr8_2:66312806-66312825 | Msa1263210:intron | 55.0% | |
TGAAGGGGAAGTCCAGCAGT+TGG | + | chr8_2:66312870-66312889 | Msa1263210:intron | 55.0% | |
GTGTCTAGGCAGTCCTGCTA+TGG | - | chr8_2:66312896-66312915 | None:intergenic | 55.0% | |
ATAAAGGGCAGGCGGTGTCT+AGG | - | chr8_2:66312910-66312929 | None:intergenic | 55.0% | |
!! | CATCAGCGTGTGTTTGGTGC+TGG | + | chr8_2:66313599-66313618 | Msa1263210:intron | 55.0% |
!! | ATCACAATTGGGCTAGCCCC+AGG | + | chr8_2:66315093-66315112 | Msa1263210:CDS | 55.0% |
GGGTTTGGGGATGGGACGAA+GGG | - | chr8_2:66309997-66310016 | None:intergenic | 60.0% | |
AGGGTTTGGGGATGGGACGA+AGG | - | chr8_2:66309998-66310017 | None:intergenic | 60.0% | |
AGCCATCATCCGGTCCTCAG+AGG | + | chr8_2:66310947-66310966 | Msa1263210:CDS | 60.0% | |
GCCACTACACATGGCCTCTG+AGG | - | chr8_2:66310964-66310983 | None:intergenic | 60.0% | |
GTCCAGCAGTTGGCCATAGC+AGG | + | chr8_2:66312880-66312899 | Msa1263210:intron | 60.0% | |
GTCCTGCTATGGCCAACTGC+TGG | - | chr8_2:66312885-66312904 | None:intergenic | 60.0% | |
GACACCGCCTGCCCTTTATC+TGG | + | chr8_2:66312911-66312930 | Msa1263210:intron | 60.0% | |
CCACGTTGAACGCGCTCCCA+TGG | - | chr8_2:66310173-66310192 | None:intergenic | 65.0% | |
! | CCATGGGAGCGCGTTCAACG+TGG | + | chr8_2:66310170-66310189 | Msa1263210:CDS | 65.0% |
! | GGCCTCTGAGGACCGGATGA+TGG | - | chr8_2:66310952-66310971 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 66309918 | 66315657 | 66309918 | ID=Msa1263210;Name=Msa1263210 |
chr8_2 | mRNA | 66309918 | 66315657 | 66309918 | ID=Msa1263210-mRNA-1;Parent=Msa1263210;Name=Msa1263210-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.33|0|1|1|1|4|0|757 |
chr8_2 | exon | 66309918 | 66310769 | 66309918 | ID=Msa1263210-mRNA-1:exon:21612;Parent=Msa1263210-mRNA-1 |
chr8_2 | exon | 66310846 | 66311529 | 66310846 | ID=Msa1263210-mRNA-1:exon:21613;Parent=Msa1263210-mRNA-1 |
chr8_2 | exon | 66314817 | 66315355 | 66314817 | ID=Msa1263210-mRNA-1:exon:21614;Parent=Msa1263210-mRNA-1 |
chr8_2 | exon | 66315459 | 66315657 | 66315459 | ID=Msa1263210-mRNA-1:exon:21615;Parent=Msa1263210-mRNA-1 |
chr8_2 | CDS | 66309918 | 66310769 | 66309918 | ID=Msa1263210-mRNA-1:cds;Parent=Msa1263210-mRNA-1 |
chr8_2 | CDS | 66310846 | 66311529 | 66310846 | ID=Msa1263210-mRNA-1:cds;Parent=Msa1263210-mRNA-1 |
chr8_2 | CDS | 66314817 | 66315355 | 66314817 | ID=Msa1263210-mRNA-1:cds;Parent=Msa1263210-mRNA-1 |
chr8_2 | CDS | 66315459 | 66315657 | 66315459 | ID=Msa1263210-mRNA-1:cds;Parent=Msa1263210-mRNA-1 |
Gene Sequence |
Protein sequence |