AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1263820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1263820 MtrunA17_Chr4g0074811 97.030 303 9 0 52 354 237 539 0.0 608
Msa1263820 MtrunA17_Chr4g0074811 87.273 55 5 2 1 55 1 53 2.73e-23 100
Msa1263820 MtrunA17_Chr5g0444171 80.528 303 59 0 52 354 238 540 0.0 523
Msa1263820 MtrunA17_Chr3g0098951 79.032 310 57 2 52 354 230 538 1.69e-178 506
Msa1263820 MtrunA17_Chr4g0074791 77.228 303 58 2 52 354 242 533 4.70e-170 484
Msa1263820 MtrunA17_Chr1g0157131 75.593 295 72 0 52 346 220 514 6.13e-168 478
Msa1263820 MtrunA17_Chr8g0387671 73.064 297 80 0 52 348 212 508 4.47e-163 466
Msa1263820 MtrunA17_Chr5g0397101 72.391 297 81 1 52 348 213 508 4.08e-160 458
Msa1263820 MtrunA17_Chr0c02g0489761 70.486 288 85 0 61 348 233 520 4.85e-151 436
Msa1263820 MtrunA17_Chr5g0441691 71.181 288 83 0 61 348 223 510 1.96e-150 434
Msa1263820 MtrunA17_Chr1g0170281 59.434 318 120 3 42 351 247 563 1.69e-135 398
Msa1263820 MtrunA17_Chr5g0448721 62.373 295 110 1 52 346 242 535 6.23e-133 390
Msa1263820 MtrunA17_Chr1g0176751 58.991 317 122 2 42 351 253 568 4.27e-132 389
Msa1263820 MtrunA17_Chr8g0385341 64.808 287 100 1 60 346 184 469 1.43e-131 385
Msa1263820 MtrunA17_Chr1g0200601 62.369 287 107 1 60 346 184 469 1.48e-131 385
Msa1263820 MtrunA17_Chr3g0131181 62.369 287 107 1 60 346 183 468 5.30e-130 382
Msa1263820 MtrunA17_Chr1g0176421 56.308 325 109 2 52 344 307 630 3.96e-128 381
Msa1263820 MtrunA17_Chr4g0059951 58.784 296 121 1 52 346 219 514 3.68e-125 370
Msa1263820 MtrunA17_Chr7g0267751 56.610 295 127 1 52 346 281 574 5.22e-121 361
Msa1263820 MtrunA17_Chr7g0242561 53.716 296 136 1 52 346 202 497 8.30e-115 343
Msa1263820 MtrunA17_Chr1g0173541 51.389 288 139 1 60 346 206 493 5.78e-108 325
Msa1263820 MtrunA17_Chr4g0033371 49.831 295 148 0 52 346 218 512 1.91e-106 322
Msa1263820 MtrunA17_Chr7g0257751 49.662 296 148 1 52 346 204 499 2.21e-105 319
Msa1263820 MtrunA17_Chr5g0405421 43.878 294 153 3 60 346 255 543 4.64e-84 265
Msa1263820 MtrunA17_Chr5g0444191 75.200 125 28 1 58 182 60 181 2.60e-64 203
Msa1263820 MtrunA17_Chr8g0374701 33.910 289 182 4 60 343 286 570 2.87e-56 192
Msa1263820 MtrunA17_Chr4g0045261 33.564 289 183 4 60 343 295 579 6.63e-56 192
Msa1263820 MtrunA17_Chr5g0402551 33.216 283 180 4 66 343 298 576 1.81e-53 185
Msa1263820 MtrunA17_Chr7g0267771 46.190 210 100 3 40 249 226 422 1.58e-52 181
Msa1263820 MtrunA17_Chr7g0256001 33.910 289 183 3 60 343 299 584 1.65e-52 182
Msa1263820 MtrunA17_Chr7g0276111 31.661 319 197 8 40 348 286 593 4.21e-49 174
Msa1263820 MtrunA17_Chr3g0127571 36.863 255 153 4 60 309 296 547 1.02e-48 172
Msa1263820 MtrunA17_Chr8g0355131 30.164 305 182 7 67 344 208 508 4.61e-37 139
Msa1263820 MtrunA17_Chr1g0203881 55.238 105 47 0 60 164 195 299 3.82e-34 131
Msa1263820 MtrunA17_Chr5g0441771 57.692 104 24 1 130 233 18 101 7.46e-31 112
Msa1263820 MtrunA17_Chr1g0190131 45.946 111 59 1 61 170 160 270 4.64e-30 115
Msa1263820 MtrunA17_Chr5g0441781 68.421 76 24 0 273 348 1 76 5.65e-30 110
Msa1263820 MtrunA17_Chr5g0440931 40.136 147 84 3 200 343 1 146 3.53e-27 104
Msa1263820 MtrunA17_Chr3g0093271 39.456 147 85 3 200 343 52 197 9.38e-27 105
Msa1263820 MtrunA17_Chr6g0460211 39.456 147 85 3 200 343 1 146 1.17e-26 103
Msa1263820 MtrunA17_Chr7g0254731 38.776 147 86 3 200 343 1 146 1.90e-26 102
Msa1263820 MtrunA17_Chr1g0166281 37.584 149 89 3 200 345 1 148 5.01e-26 101
Msa1263820 MtrunA17_Chr3g0132591 45.192 104 57 0 61 164 257 360 3.09e-24 103
Msa1263820 MtrunA17_Chr1g0188171 36.242 149 91 3 200 345 1 148 1.58e-23 95.1
Msa1263820 MtrunA17_Chr7g0274941 40.351 114 66 1 61 172 169 282 1.59e-23 99.0
Msa1263820 MtrunA17_Chr1g0185001 33.562 146 94 2 200 343 1 145 6.15e-21 87.8
Msa1263820 MtrunA17_Chr4g0062221 36.364 143 83 3 207 343 7 147 2.36e-19 84.3
Msa1263820 MtrunA17_Chr4g0033601 35.461 141 83 4 212 346 6 144 2.78e-19 83.6
Msa1263820 MtrunA17_Chr4g0001331 39.535 129 66 4 41 167 159 277 8.61e-19 87.4
Msa1263820 MtrunA17_Chr4g0069301 36.434 129 70 5 41 167 166 284 1.64e-18 86.3
Msa1263820 MtrunA17_Chr8g0351491 36.190 105 64 2 65 168 169 271 5.72e-18 82.8
Msa1263820 MtrunA17_Chr5g0434951 37.226 137 77 4 212 343 5 137 6.64e-18 79.3
Msa1263820 MtrunA17_Chr8g0391691 36.111 144 82 4 212 349 37 176 1.05e-17 80.1
Msa1263820 MtrunA17_Chr7g0245231 34.483 145 91 3 204 345 23 166 2.02e-17 79.0
Msa1263820 MtrunA17_Chr3g0125381 36.190 105 64 2 65 168 108 210 2.46e-17 79.7
Msa1263820 MtrunA17_Chr3g0140631 37.037 108 65 2 65 171 190 295 2.78e-17 81.3
Msa1263820 MtrunA17_Chr1g0205421 37.607 117 61 4 53 167 163 269 1.90e-16 80.1
Msa1263820 MtrunA17_Chr1g0169581 34.752 141 78 4 212 343 5 140 2.24e-16 75.1
Msa1263820 MtrunA17_Chr2g0304111 34.109 129 73 5 41 167 163 281 3.77e-16 79.3
Msa1263820 MtrunA17_Chr1g0150321 41.176 102 54 4 68 167 173 270 4.10e-16 79.0
Msa1263820 MtrunA17_Chr8g0368681 32.414 145 90 3 205 343 6 148 4.52e-16 75.1
Msa1263820 MtrunA17_Chr4g0064231 34.194 155 82 3 212 346 65 219 5.72e-16 76.3
Msa1263820 MtrunA17_Chr8g0353621 35.644 101 62 2 65 164 163 261 6.26e-16 77.0
Msa1263820 MtrunA17_Chr8g0366401 31.333 150 94 3 204 346 10 157 6.33e-16 74.7
Msa1263820 MtrunA17_Chr7g0256171 34.286 140 86 3 212 346 6 144 9.65e-16 73.9
Msa1263820 MtrunA17_Chr8g0346071 41.121 107 57 4 63 167 171 273 1.25e-15 77.8
Msa1263820 MtrunA17_Chr6g0450921 35.417 144 84 5 212 349 30 170 1.28e-15 73.9
Msa1263820 MtrunA17_Chr6g0482731 34.559 136 83 3 212 343 27 160 1.63e-15 73.6
Msa1263820 MtrunA17_Chr8g0392951 33.803 142 87 4 212 349 25 163 1.92e-15 73.2
Msa1263820 MtrunA17_Chr3g0111371 34.028 144 82 5 204 343 1 135 2.01e-15 72.4
Msa1263820 MtrunA17_Chr4g0063881 42.157 102 53 4 68 167 170 267 3.40e-15 76.3
Msa1263820 MtrunA17_Chr2g0329371 31.915 141 90 2 212 346 65 205 4.21e-15 73.6
Msa1263820 MtrunA17_Chr4g0044961 28.409 176 120 3 177 349 23 195 5.59e-15 72.8
Msa1263820 MtrunA17_Chr7g0244561 32.374 139 81 6 60 192 170 301 5.61e-15 75.5
Msa1263820 MtrunA17_Chr1g0161211 35.294 136 82 3 212 343 47 180 6.78e-15 72.4
Msa1263820 MtrunA17_Chr6g0468751 28.365 208 112 6 61 255 170 353 9.25e-15 75.5
Msa1263820 MtrunA17_Chr6g0453681 38.318 107 60 2 61 165 170 272 1.04e-14 75.1
Msa1263820 MtrunA17_Chr7g0245911 33.333 147 85 4 212 346 48 193 1.05e-14 72.0
Msa1263820 MtrunA17_Chr2g0333821 36.434 129 70 5 41 167 153 271 1.05e-14 75.1
Msa1263820 MtrunA17_Chr8g0346081 39.815 108 59 4 62 167 170 273 1.94e-14 73.9
Msa1263820 MtrunA17_Chr4g0008561 32.500 120 78 3 58 175 169 287 2.20e-14 74.3
Msa1263820 MtrunA17_Chr5g0398751 32.653 147 93 4 200 343 1 144 2.37e-14 69.7
Msa1263820 MtrunA17_Chr4g0013131 39.091 110 58 5 68 175 172 274 2.83e-14 73.6
Msa1263820 MtrunA17_Chr3g0100541 30.464 151 90 2 197 346 38 174 3.08e-14 70.1
Msa1263820 MtrunA17_Chr3g0132671 36.697 109 63 2 61 167 200 304 3.45e-14 73.6
Msa1263820 MtrunA17_Chr3g0125311 33.784 148 80 4 212 343 14 159 5.00e-14 69.3
Msa1263820 MtrunA17_Chr2g0284011 33.945 109 66 3 68 174 172 276 5.33e-14 72.8
Msa1263820 MtrunA17_Chr6g0453671 38.318 107 60 2 61 165 170 272 5.37e-14 72.4
Msa1263820 MtrunA17_Chr2g0302431 37.255 102 58 4 68 167 181 278 5.45e-14 72.8
Msa1263820 MtrunA17_Chr5g0441011 38.614 101 56 4 68 166 174 270 5.99e-14 72.8
Msa1263820 MtrunA17_Chr5g0432491 37.864 103 58 4 67 167 183 281 6.55e-14 72.4
Msa1263820 MtrunA17_Chr6g0478601 37.273 110 56 4 65 166 298 402 1.28e-13 72.0
Msa1263820 MtrunA17_Chr5g0399911 35.577 104 63 3 65 164 172 275 1.38e-13 71.2
Msa1263820 MtrunA17_Chr7g0274101 32.653 147 95 3 200 343 1 146 1.94e-13 67.4
Msa1263820 MtrunA17_Chr7g0244521 37.273 110 60 4 68 175 172 274 2.14e-13 70.9
Msa1263820 MtrunA17_Chr3g0131061 33.654 104 65 3 65 164 157 260 4.42e-13 69.7
Msa1263820 MtrunA17_Chr8g0380661 35.185 108 56 5 65 163 154 256 6.25e-13 68.9
Msa1263820 MtrunA17_Chr4g0057651 33.071 127 80 2 220 343 15 139 6.27e-13 65.5
Msa1263820 MtrunA17_Chr3g0131501 29.655 145 95 3 196 339 19 157 1.21e-12 68.9
Msa1263820 MtrunA17_Chr8g0338741 29.814 161 95 5 6 165 201 344 1.39e-12 68.6
Msa1263820 MtrunA17_Chr8g0369111 26.087 184 111 3 178 339 28 208 1.42e-12 66.6
Msa1263820 MtrunA17_Chr1g0160151 32.877 146 76 5 212 343 23 160 1.48e-12 65.1
Msa1263820 MtrunA17_Chr8g0381821 35.577 104 63 3 65 164 157 260 1.50e-12 67.8
Msa1263820 MtrunA17_Chr5g0428981 36.792 106 62 3 65 166 949 1053 1.55e-12 68.9
Msa1263820 MtrunA17_Chr1g0170551 34.286 105 64 3 63 166 159 259 1.57e-12 68.9
Msa1263820 MtrunA17_Chr8g0385571 28.302 159 106 4 196 353 41 192 1.64e-12 68.6
Msa1263820 MtrunA17_Chr4g0057661 33.071 127 80 2 220 343 15 139 1.74e-12 64.3
Msa1263820 MtrunA17_Chr8g0385281 33.654 104 65 3 65 164 158 261 2.32e-12 67.4
Msa1263820 MtrunA17_Chr2g0277501 33.654 104 65 3 65 164 157 260 2.53e-12 67.4
Msa1263820 MtrunA17_Chr7g0256701 31.206 141 86 4 212 343 74 212 2.60e-12 65.5
Msa1263820 MtrunA17_Chr7g0245371 28.378 148 92 2 212 345 25 172 2.62e-12 64.7
Msa1263820 MtrunA17_Chr4g0018201 36.792 106 62 3 65 166 945 1049 2.65e-12 68.2
Msa1263820 MtrunA17_Chr8g0373691 28.105 153 104 3 195 343 37 187 2.71e-12 65.1
Msa1263820 MtrunA17_Chr2g0284031 31.776 107 67 4 63 167 186 288 3.08e-12 67.8
Msa1263820 MtrunA17_Chr4g0057641 31.061 132 86 2 215 343 10 139 3.80e-12 63.2
Msa1263820 MtrunA17_Chr4g0055451 35.238 105 62 4 65 164 158 261 6.00e-12 65.9
Msa1263820 MtrunA17_Chr5g0402361 29.412 136 95 1 212 346 49 184 6.30e-12 66.2
Msa1263820 MtrunA17_Chr8g0351681 29.139 151 97 3 207 347 45 195 7.10e-12 63.9
Msa1263820 MtrunA17_Chr7g0225921 30.827 133 86 3 215 343 10 140 8.83e-12 62.4
Msa1263820 MtrunA17_Chr3g0100511 27.517 149 93 2 197 344 38 172 1.44e-11 62.4
Msa1263820 MtrunA17_Chr1g0153321 40.385 104 53 5 68 165 309 409 1.49e-11 65.5
Msa1263820 MtrunA17_Chr3g0123791 34.615 104 64 3 65 164 158 261 1.95e-11 64.7
Msa1263820 MtrunA17_Chr2g0299781 36.538 104 59 4 68 166 321 422 2.35e-11 64.7
Msa1263820 MtrunA17_Chr7g0227331 32.692 104 63 3 67 165 472 573 2.90e-11 64.7
Msa1263820 MtrunA17_Chr1g0167311 36.275 102 59 4 68 165 316 415 5.16e-11 63.9
Msa1263820 MtrunA17_Chr5g0402331 29.197 137 95 2 212 346 49 185 6.37e-11 60.8
Msa1263820 MtrunA17_Chr5g0426521 33.945 109 58 4 65 164 157 260 6.88e-11 62.8
Msa1263820 MtrunA17_Chr7g0234641 38.235 102 53 3 67 165 241 335 8.03e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1263820 AT4G04720.2 81.250 304 55 2 52 354 226 528 0.0 518
Msa1263820 AT4G04720.1 81.250 304 55 2 52 354 226 528 0.0 518
Msa1263820 AT4G21940.1 79.344 305 60 2 52 354 248 551 0.0 514
Msa1263820 AT3G20410.2 79.264 299 62 0 52 350 237 535 0.0 513
Msa1263820 AT3G20410.1 79.264 299 62 0 52 350 237 535 0.0 513
Msa1263820 AT4G21940.2 81.419 296 52 2 61 354 257 551 0.0 513
Msa1263820 AT1G50700.1 78.878 303 64 0 52 354 219 521 0.0 512
Msa1263820 AT1G50700.2 72.644 329 64 1 52 354 219 547 5.51e-175 498
Msa1263820 AT1G61950.1 75.850 294 70 1 61 353 254 547 1.89e-165 473
Msa1263820 AT1G76040.1 72.727 297 80 1 56 352 24 319 2.09e-164 462
Msa1263820 AT1G76040.4 72.727 297 80 1 56 352 24 319 2.09e-164 462
Msa1263820 AT1G76040.2 73.973 292 75 1 61 352 267 557 2.43e-160 461
Msa1263820 AT4G04740.4 74.825 286 71 1 61 346 224 508 5.10e-160 458
Msa1263820 AT4G04740.6 74.825 286 71 1 61 346 224 508 5.10e-160 458
Msa1263820 AT4G04740.5 74.825 286 71 1 61 346 224 508 5.10e-160 458
Msa1263820 AT4G04740.3 74.825 286 71 1 61 346 224 508 5.10e-160 458
Msa1263820 AT4G04740.1 74.825 286 71 1 61 346 224 508 5.10e-160 458
Msa1263820 AT4G04740.7 74.825 286 71 1 61 346 224 508 5.10e-160 458
Msa1263820 AT4G23650.1 70.100 301 90 0 52 352 224 524 9.81e-159 456
Msa1263820 AT5G19360.1 70.307 293 87 0 60 352 222 514 5.49e-152 438
Msa1263820 AT5G12180.1 69.966 293 88 0 60 352 227 519 5.52e-151 436
Msa1263820 AT4G04740.2 74.815 270 67 1 61 330 224 492 1.48e-149 432
Msa1263820 AT4G04710.2 69.967 303 82 3 52 353 186 480 4.76e-149 429
Msa1263820 AT4G04710.3 71.769 294 74 3 61 353 181 466 5.70e-149 429
Msa1263820 AT4G04710.1 68.387 310 88 3 52 353 186 493 2.70e-148 428
Msa1263820 AT4G21940.3 83.966 237 37 1 61 297 257 492 1.49e-147 426
Msa1263820 AT1G50700.3 80.894 246 47 0 52 297 219 464 1.81e-147 425
Msa1263820 AT4G04710.4 67.949 312 88 4 52 353 186 495 2.70e-146 423
Msa1263820 AT4G04695.1 66.221 299 100 1 52 350 178 475 9.38e-141 408
Msa1263820 AT5G04870.1 62.583 302 112 1 52 353 296 596 6.39e-136 400
Msa1263820 AT4G04700.1 63.607 305 108 2 52 354 178 481 1.16e-135 395
Msa1263820 AT2G17290.1 62.373 295 110 1 52 346 231 524 2.13e-135 397
Msa1263820 AT2G17290.2 62.373 295 110 1 52 346 231 524 2.13e-135 397
Msa1263820 AT3G10660.2 60.828 314 118 2 40 353 324 632 1.79e-134 398
Msa1263820 AT3G10660.1 60.828 314 118 2 40 353 324 632 1.79e-134 398
Msa1263820 AT1G76040.3 75.314 239 58 1 61 299 267 504 1.07e-131 386
Msa1263820 AT4G38230.1 59.122 296 120 1 52 347 26 320 3.57e-131 379
Msa1263820 AT2G38910.1 60.751 293 114 1 52 344 280 571 1.94e-130 385
Msa1263820 AT4G35310.2 60.339 295 116 1 52 346 243 536 7.31e-130 383
Msa1263820 AT4G35310.1 60.339 295 116 1 52 346 243 536 7.31e-130 383
Msa1263820 AT4G38230.4 59.122 296 120 1 52 347 170 464 1.31e-129 380
Msa1263820 AT4G38230.3 59.122 296 120 1 52 347 170 464 1.31e-129 380
Msa1263820 AT1G35670.1 62.021 287 108 1 60 346 180 465 3.43e-129 379
Msa1263820 AT4G38230.2 59.122 296 120 1 52 347 200 494 4.49e-129 379
Msa1263820 AT4G09570.1 61.324 287 110 1 60 346 179 464 2.24e-127 375
Msa1263820 AT5G23580.1 58.362 293 121 1 52 344 168 459 1.03e-123 365
Msa1263820 AT3G51850.1 54.054 296 135 1 52 346 200 495 2.19e-116 347
Msa1263820 AT1G74740.1 53.378 296 137 1 52 346 205 500 7.12e-114 342
Msa1263820 AT1G18890.1 53.041 296 138 1 52 346 209 504 2.66e-111 335
Msa1263820 AT5G12480.2 51.515 297 142 1 52 346 111 407 6.81e-111 330
Msa1263820 AT5G12480.1 51.515 297 142 1 52 346 205 501 1.06e-109 330
Msa1263820 AT5G19450.2 51.178 297 143 2 52 346 203 499 8.73e-108 326
Msa1263820 AT5G19450.1 51.178 297 143 2 52 346 203 499 8.73e-108 326
Msa1263820 AT3G51850.2 53.047 279 130 1 52 329 200 478 1.33e-106 322
Msa1263820 AT3G57530.1 49.831 295 148 0 52 346 209 503 2.92e-105 319
Msa1263820 AT2G31500.1 49.164 299 148 1 52 346 212 510 3.97e-103 315
Msa1263820 AT2G41860.1 49.662 296 148 1 52 346 200 495 6.11e-103 313
Msa1263820 AT2G41860.2 49.662 296 148 1 52 346 200 495 9.62e-103 313
Msa1263820 AT2G17890.1 43.098 297 157 3 57 346 261 552 3.66e-83 263
Msa1263820 AT2G35890.2 51.724 232 111 1 52 282 278 509 1.49e-82 260
Msa1263820 AT2G35890.1 51.724 232 111 1 52 282 278 509 1.49e-82 260
Msa1263820 AT3G51850.3 53.456 217 101 0 52 268 200 416 5.65e-82 256
Msa1263820 AT5G66210.1 42.517 294 157 4 60 346 218 506 7.76e-81 256
Msa1263820 AT5G66210.2 42.517 294 157 4 60 346 218 506 7.76e-81 256
Msa1263820 AT4G36070.1 41.497 294 160 3 60 346 227 515 3.15e-79 252
Msa1263820 AT4G36070.2 41.497 294 160 3 60 346 227 515 7.16e-79 252
Msa1263820 AT5G66210.3 45.098 255 133 3 60 307 218 472 2.22e-75 241
Msa1263820 AT5G66210.5 45.238 252 131 3 60 304 218 469 4.01e-75 239
Msa1263820 AT3G57530.2 51.208 207 101 0 52 258 209 415 1.97e-73 234
Msa1263820 AT5G66210.6 46.701 197 104 1 60 255 218 414 2.60e-61 202
Msa1263820 AT5G66210.4 46.701 197 104 1 60 255 218 414 2.60e-61 202
Msa1263820 AT3G50530.1 32.872 289 185 4 60 343 306 590 2.06e-56 194
Msa1263820 AT3G50530.2 33.216 283 180 4 66 343 343 621 5.67e-56 193
Msa1263820 AT3G19100.1 33.564 289 183 4 60 343 302 586 9.79e-54 186
Msa1263820 AT1G49580.1 32.526 289 187 3 60 343 308 593 1.16e-53 186
Msa1263820 AT2G41140.1 32.180 289 187 4 60 343 281 565 1.60e-49 175
Msa1263820 AT3G56760.1 31.834 289 188 4 60 343 282 566 1.14e-48 172
Msa1263820 AT3G49370.1 34.420 276 168 6 66 336 306 573 5.69e-45 162
Msa1263820 AT2G46700.2 32.362 309 193 6 40 343 104 401 2.04e-44 158
Msa1263820 AT2G46700.3 32.362 309 193 6 40 343 104 401 2.04e-44 158
Msa1263820 AT2G46700.1 32.362 309 193 6 40 343 285 582 1.45e-43 159
Msa1263820 AT5G24430.1 34.940 249 154 4 66 309 307 552 4.22e-43 157
Msa1263820 AT1G12580.1 48.718 117 60 0 60 176 198 314 6.32e-34 131
Msa1263820 AT1G08650.1 40.800 125 73 1 52 175 160 284 2.67e-29 114
Msa1263820 AT1G12680.1 49.038 104 53 0 61 164 252 355 1.40e-27 113
Msa1263820 AT1G66410.1 40.136 147 84 3 200 343 1 146 3.84e-27 105
Msa1263820 AT5G37780.1 40.136 147 84 3 200 343 1 146 3.84e-27 105
Msa1263820 AT5G21274.1 39.456 147 85 3 200 343 1 146 1.04e-26 103
Msa1263820 AT3G56800.1 39.456 147 85 3 200 343 1 146 1.17e-26 103
Msa1263820 AT2G41110.1 39.456 147 85 3 200 343 1 146 1.17e-26 103
Msa1263820 AT2G27030.1 39.456 147 85 3 200 343 1 146 1.17e-26 103
Msa1263820 AT3G43810.1 39.456 147 85 3 200 343 1 146 1.61e-26 103
Msa1263820 AT2G27030.3 39.456 147 85 3 200 343 1 146 2.07e-26 103
Msa1263820 AT3G43810.2 39.456 147 85 3 200 343 1 146 4.79e-26 103
Msa1263820 AT3G04530.1 45.045 111 60 1 59 168 163 273 9.59e-26 104
Msa1263820 AT2G41110.2 36.025 161 87 4 200 345 1 160 1.03e-23 96.3
Msa1263820 AT5G37780.2 36.420 162 84 4 200 343 1 161 2.54e-23 95.1
Msa1263820 AT1G08650.2 39.655 116 67 2 52 166 160 273 3.52e-23 97.8
Msa1263820 AT3G59440.1 37.681 138 83 1 212 346 52 189 1.57e-22 94.0
Msa1263820 AT1G66410.2 37.580 157 84 4 200 343 1 156 2.48e-22 92.4
Msa1263820 AT5G37780.3 34.682 173 83 4 200 343 1 172 3.94e-22 92.4
Msa1263820 AT3G22930.1 36.364 143 87 3 204 343 28 169 6.77e-22 91.7
Msa1263820 AT5G37780.4 40.984 122 68 3 225 343 13 133 1.25e-21 89.7
Msa1263820 AT1G05990.1 36.429 140 84 2 212 346 6 145 1.75e-20 87.0
Msa1263820 AT4G14640.1 36.806 144 85 4 204 343 6 147 1.81e-20 87.0
Msa1263820 AT2G43290.1 35.417 144 84 2 212 346 66 209 2.19e-20 88.6
Msa1263820 AT2G41100.7 31.953 169 96 3 198 347 53 221 4.43e-20 89.4
Msa1263820 AT2G41100.7 33.083 133 70 5 239 352 5 137 1.20e-12 68.2
Msa1263820 AT2G41100.6 31.953 169 96 3 198 347 53 221 4.43e-20 89.4
Msa1263820 AT2G41100.6 33.083 133 70 5 239 352 5 137 1.20e-12 68.2
Msa1263820 AT2G41100.3 31.953 169 96 3 198 347 53 221 4.43e-20 89.4
Msa1263820 AT2G41100.3 33.083 133 70 5 239 352 5 137 1.20e-12 68.2
Msa1263820 AT2G41100.4 31.953 169 96 3 198 347 88 256 8.30e-20 89.4
Msa1263820 AT2G41100.4 32.558 172 97 5 200 352 1 172 4.69e-19 87.0
Msa1263820 AT2G41100.1 31.953 169 96 3 198 347 88 256 8.30e-20 89.4
Msa1263820 AT2G41100.1 32.558 172 97 5 200 352 1 172 4.69e-19 87.0
Msa1263820 AT3G50360.1 35.417 144 89 3 204 344 20 162 9.01e-19 83.2
Msa1263820 AT1G66410.4 40.741 108 60 3 239 343 4 110 1.34e-18 80.9
Msa1263820 AT1G66410.3 40.741 108 60 3 239 343 4 110 1.34e-18 80.9
Msa1263820 AT1G32250.1 31.847 157 95 3 200 346 5 159 1.90e-18 82.0
Msa1263820 AT3G43810.4 40.741 108 60 3 239 343 4 110 1.97e-18 80.5
Msa1263820 AT3G43810.3 40.741 108 60 3 239 343 4 110 1.97e-18 80.5
Msa1263820 AT2G45490.1 38.614 101 59 2 65 164 175 273 4.55e-18 83.6
Msa1263820 AT1G18530.1 34.028 144 87 3 206 343 2 143 8.36e-18 80.1
Msa1263820 AT2G41090.1 34.247 146 91 3 200 343 1 143 8.58e-18 80.9
Msa1263820 AT4G14640.2 38.211 123 70 4 225 343 9 129 9.73e-18 79.0
Msa1263820 AT4G03290.1 33.099 142 88 2 212 346 6 147 1.62e-17 79.3
Msa1263820 AT3G25600.1 33.333 150 92 3 200 343 1 148 1.89e-17 79.3
Msa1263820 AT1G30270.3 34.848 132 74 5 41 170 74 195 1.95e-17 83.2
Msa1263820 AT1G30270.1 34.848 132 74 5 41 170 171 292 3.07e-17 83.2
Msa1263820 AT1G30270.2 34.848 132 74 5 41 170 171 292 3.63e-17 82.8
Msa1263820 AT2G25090.1 42.574 101 52 4 68 166 184 280 6.59e-17 82.0
Msa1263820 AT2G25880.4 37.037 108 65 2 65 171 191 296 1.32e-16 79.7
Msa1263820 AT2G25880.2 37.037 108 65 2 65 171 146 251 1.37e-16 79.0
Msa1263820 AT5G25110.1 39.130 115 59 4 59 166 189 299 1.62e-16 80.9
Msa1263820 AT2G25880.1 37.037 108 65 2 65 171 178 283 1.71e-16 79.3
Msa1263820 AT5G10930.1 35.652 115 63 4 59 166 159 269 2.06e-16 80.5
Msa1263820 AT1G66400.1 32.903 155 89 5 200 343 1 151 2.33e-16 75.9
Msa1263820 AT4G32830.1 37.963 108 64 2 65 171 184 289 2.62e-16 79.0
Msa1263820 AT4G12860.1 34.532 139 87 2 212 346 6 144 2.71e-16 75.9
Msa1263820 AT2G25880.3 37.037 108 65 2 65 171 239 344 3.40e-16 79.3
Msa1263820 AT5G39440.1 40.000 105 58 2 61 164 170 270 5.99e-16 79.3
Msa1263820 AT4G37010.2 32.877 146 90 4 204 344 24 166 6.92e-16 75.1
Msa1263820 AT4G37010.1 32.877 146 90 4 204 344 20 162 6.93e-16 75.1
Msa1263820 AT2G15680.1 31.034 145 94 3 204 345 43 184 7.42e-16 75.5
Msa1263820 AT1G45160.2 36.585 123 63 5 51 165 841 956 1.42e-15 78.6
Msa1263820 AT4G30960.1 35.897 117 68 5 68 181 184 296 1.44e-15 77.8
Msa1263820 AT3G01090.3 39.252 107 59 2 61 165 170 272 1.81e-15 77.8
Msa1263820 AT3G01090.1 39.252 107 59 2 61 165 170 272 1.81e-15 77.8
Msa1263820 AT1G45160.1 36.585 123 63 5 51 165 841 956 1.98e-15 78.2
Msa1263820 AT1G24620.1 34.266 143 88 3 208 346 34 174 2.11e-15 73.9
Msa1263820 AT3G01090.2 39.252 107 59 2 61 165 193 295 2.14e-15 77.8
Msa1263820 AT3G07490.1 34.286 140 86 3 212 346 6 144 2.35e-15 73.2
Msa1263820 AT5G62310.1 38.889 108 53 4 67 166 943 1045 3.07e-15 77.8
Msa1263820 AT5G37770.1 32.168 143 87 4 212 346 18 158 3.08e-15 73.2
Msa1263820 AT5G37770.2 32.168 143 87 4 212 346 18 158 3.08e-15 73.2
Msa1263820 AT2G30360.1 32.143 140 84 5 60 192 175 310 4.89e-15 76.3
Msa1263820 AT3G51920.1 31.507 146 98 2 200 343 1 146 1.05e-14 71.2
Msa1263820 AT3G29160.3 39.252 107 59 2 61 165 171 273 2.15e-14 73.9
Msa1263820 AT3G29160.1 39.252 107 59 2 61 165 171 273 2.79e-14 74.3
Msa1263820 AT3G29160.2 39.252 107 59 2 61 165 171 273 2.79e-14 74.3
Msa1263820 AT1G01140.3 37.255 102 58 4 68 167 180 277 3.60e-14 73.9
Msa1263820 AT1G01140.1 37.255 102 58 4 68 167 180 277 3.73e-14 73.6
Msa1263820 AT4G26470.1 25.604 207 129 4 153 339 5 206 3.94e-14 71.6
Msa1263820 AT4G26470.3 25.561 223 139 5 139 339 52 269 4.15e-14 72.4
Msa1263820 AT2G26980.1 39.604 101 55 4 68 166 175 271 4.28e-14 73.2
Msa1263820 AT1G01140.2 35.294 102 62 3 68 167 180 279 5.31e-14 73.2
Msa1263820 AT5G58380.1 35.965 114 67 4 68 179 172 281 6.70e-14 73.2
Msa1263820 AT4G40010.1 39.252 107 61 4 65 167 157 263 7.25e-14 72.4
Msa1263820 AT2G36180.1 28.369 141 92 3 212 345 1 139 8.61e-14 68.6
Msa1263820 AT1G73630.1 31.387 137 86 4 212 345 21 152 1.00e-13 68.9
Msa1263820 AT1G18210.2 32.331 133 86 3 212 343 24 153 1.25e-13 68.6
Msa1263820 AT1G18210.1 32.331 133 86 3 212 343 24 153 1.25e-13 68.6
Msa1263820 AT3G22930.2 34.314 102 66 1 204 304 28 129 1.33e-13 67.4
Msa1263820 AT5G01810.3 34.314 102 61 3 68 167 172 269 1.36e-13 71.6
Msa1263820 AT5G01810.1 34.314 102 61 3 68 167 172 269 1.36e-13 72.0
Msa1263820 AT5G01810.2 34.314 102 61 3 68 167 172 269 1.36e-13 72.0
Msa1263820 AT5G57630.3 28.283 198 122 6 61 255 74 254 1.48e-13 71.2
Msa1263820 AT5G42380.1 31.206 141 90 3 209 344 47 185 1.51e-13 68.9
Msa1263820 AT4G18700.1 35.514 107 63 4 63 167 181 283 1.62e-13 72.0
Msa1263820 AT3G17510.1 25.000 252 141 7 41 263 160 392 1.89e-13 71.6
Msa1263820 AT3G17510.2 25.000 252 141 7 41 263 80 312 2.02e-13 71.2
Msa1263820 AT1G48490.3 37.273 110 56 4 65 166 1009 1113 2.13e-13 72.0
Msa1263820 AT1G48490.2 37.273 110 56 4 65 166 1009 1113 2.13e-13 72.0
Msa1263820 AT1G48490.1 37.273 110 56 4 65 166 1009 1113 2.13e-13 72.0
Msa1263820 AT1G48490.4 37.273 110 56 4 65 166 1010 1114 2.13e-13 72.0
Msa1263820 AT5G35410.2 37.736 106 60 4 62 165 164 265 2.32e-13 70.9
Msa1263820 AT5G21326.1 38.614 101 56 4 68 166 174 270 2.35e-13 71.2
Msa1263820 AT3G61960.1 34.188 117 75 2 58 172 160 276 2.93e-13 71.2
Msa1263820 AT3G61960.2 34.188 117 75 2 58 172 160 276 3.25e-13 71.2
Msa1263820 AT3G17850.1 37.273 110 56 4 65 166 1069 1173 4.11e-13 71.2
Msa1263820 AT5G35410.1 37.736 106 60 4 62 165 164 265 4.28e-13 70.5
Msa1263820 AT5G57630.2 28.788 198 121 7 61 255 162 342 4.31e-13 70.5
Msa1263820 AT5G57630.1 28.788 198 121 7 61 255 162 342 4.59e-13 70.1
Msa1263820 AT5G45810.1 35.514 107 63 5 63 167 183 285 6.19e-13 70.1
Msa1263820 AT2G41100.2 32.031 128 68 3 239 347 4 131 7.02e-13 67.4
Msa1263820 AT3G10190.1 30.827 133 85 3 216 343 75 205 8.63e-13 67.0
Msa1263820 AT1G48260.2 31.361 169 85 5 68 210 87 250 9.60e-13 68.9
Msa1263820 AT1G48260.4 31.361 169 85 5 68 210 87 250 9.60e-13 68.9
Msa1263820 AT1G48260.3 31.361 169 85 5 68 210 87 250 9.60e-13 68.9
Msa1263820 AT1G48260.5 31.361 169 85 5 68 210 87 250 9.60e-13 68.9
Msa1263820 AT5G45820.1 33.028 109 67 4 68 174 172 276 1.12e-12 69.3
Msa1263820 AT5G07070.1 38.235 102 57 4 68 167 172 269 1.23e-12 68.9
Msa1263820 AT5G08590.2 34.951 103 63 3 65 163 81 183 1.28e-12 67.8
Msa1263820 AT5G07320.1 28.966 145 96 3 196 339 23 161 1.51e-12 68.9
Msa1263820 AT2G34180.1 35.514 107 63 4 63 167 212 314 1.54e-12 68.9
Msa1263820 AT5G08590.1 34.951 103 63 3 65 163 157 259 1.62e-12 68.2
Msa1263820 AT1G76640.1 31.034 145 92 3 206 344 17 159 3.20e-12 64.3
Msa1263820 AT4G20780.1 27.215 158 89 3 212 345 30 185 3.26e-12 65.1
Msa1263820 AT3G03000.1 31.081 148 93 4 204 345 13 157 3.38e-12 64.7
Msa1263820 AT5G17470.1 28.148 135 89 3 215 343 6 138 5.93e-12 63.2
Msa1263820 AT1G10940.2 33.654 104 65 3 65 164 165 268 7.09e-12 66.6
Msa1263820 AT1G10940.1 33.654 104 65 3 65 164 157 260 8.08e-12 66.2
Msa1263820 AT4G14640.3 34.951 103 64 2 204 304 6 107 1.22e-11 61.6
Msa1263820 AT5G09890.2 34.615 130 74 5 51 176 292 414 1.42e-11 65.9
Msa1263820 AT5G09890.1 36.283 113 65 4 68 176 305 414 1.44e-11 65.9
Msa1263820 AT5G63650.1 33.981 103 64 3 65 163 157 259 1.90e-11 65.1
Msa1263820 AT1G12310.1 28.472 144 99 3 202 343 4 145 1.93e-11 62.0
Msa1263820 AT1G59580.2 34.028 144 64 5 61 174 187 329 2.01e-11 65.1
Msa1263820 AT1G59580.1 34.028 144 64 5 61 174 187 329 2.01e-11 65.1
Msa1263820 AT4G26470.2 25.140 179 110 3 153 312 5 178 2.51e-11 63.2
Msa1263820 AT3G23310.1 32.667 150 85 7 21 164 282 421 2.79e-11 65.1
Msa1263820 AT1G76650.1 29.577 142 95 2 206 344 38 177 3.01e-11 62.0
Msa1263820 AT1G76650.3 29.577 142 95 2 206 344 38 177 3.01e-11 62.0
Msa1263820 AT1G60940.1 31.731 104 67 2 65 164 157 260 3.12e-11 64.3
Msa1263820 AT1G60940.2 31.731 104 67 2 65 164 157 260 3.12e-11 64.3
Msa1263820 AT4G33950.2 33.654 104 65 3 65 164 174 277 3.21e-11 64.3
Msa1263820 AT4G33950.1 33.654 104 65 3 65 164 174 277 4.27e-11 63.9
Msa1263820 AT3G27580.2 31.731 104 64 3 67 165 416 517 6.25e-11 63.9
Msa1263820 AT3G27580.1 31.731 104 64 3 67 165 416 517 6.25e-11 63.9
Msa1263820 AT1G03920.1 35.644 101 60 3 68 164 336 435 8.26e-11 63.5
Msa1263820 AT1G03920.3 35.644 101 60 3 68 164 336 435 8.26e-11 63.5
Msa1263820 AT1G62820.1 27.778 144 100 3 202 343 4 145 9.08e-11 60.1

Find 112 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAACCTTGCTACGAAAAT+TGG 0.123518 8_2:+67123552 None:intergenic
TTTGTAAGTTTCACCTTATT+TGG 0.139591 8_2:-67123215 Msa1263820:three_prime_UTR
AATAGATTATCAATACATTA+TGG 0.221748 8_2:+67123304 None:intergenic
ATACGTCTTGTTTCCAAATA+AGG 0.230554 8_2:+67123202 None:intergenic
GTAGAAGTGATTCTCTTCTT+TGG 0.233824 8_2:+67125908 None:intergenic
GGGAATATTTAATGCTATAT+TGG 0.238862 8_2:-67126017 Msa1263820:CDS
AAGAAGTGTCTTGCATATTC+TGG 0.250425 8_2:+67123611 None:intergenic
AAAGAAAGGCTCTTGTTAAT+AGG 0.251209 8_2:+67123235 None:intergenic
TATCTAGAATGAAACAATTC+AGG 0.281671 8_2:-67125478 Msa1263820:CDS
CATCTTCCGGACTAGATCTT+TGG 0.322108 8_2:+67125943 None:intergenic
TTACTTCCTCATACGGGTTA+AGG 0.329243 8_2:+67123347 None:intergenic
TTATCAGAAGAAGAGATTAA+AGG 0.339374 8_2:-67124922 Msa1263820:CDS
GTGATTCTCTTCTTTGGATC+TGG 0.341020 8_2:+67125914 None:intergenic
CAGTGTTATGCTCTTATTTG+TGG 0.351178 8_2:-67123405 Msa1263820:three_prime_UTR
ATCGAGAGACTTAACGTTGT+TGG 0.351564 8_2:-67123650 Msa1263820:three_prime_UTR
CAGGCTGATGTTGATGGAAA+TGG 0.357534 8_2:-67124672 Msa1263820:CDS
GTTCAAGAAACTTGCATTGA+AGG 0.357996 8_2:-67125444 Msa1263820:intron
TTGGCACTTTCTGATATTGA+TGG 0.360341 8_2:+67125962 None:intergenic
GATCTGGTGTCAGCATCTTC+CGG 0.364087 8_2:+67125930 None:intergenic
GTTTCTCAGGCTGATGTTGA+TGG 0.365465 8_2:-67124678 Msa1263820:intron
AGGAAAAGTTTACCGTGATA+TGG 0.368012 8_2:-67126276 Msa1263820:CDS
ATATTGTATATTCTGCTTAG+TGG 0.368948 8_2:-67126173 Msa1263820:CDS
GGAAAAGGAAGAAAAGAAAA+GGG 0.370659 8_2:+67123256 None:intergenic
TGCACTATCAATCGGTTTAT+CGG 0.370947 8_2:+67125505 None:intergenic
TATTGTCCTTATCAAAATAC+TGG 0.372678 8_2:+67124568 None:intergenic
ATATGCAAGACACTTCTTCA+TGG 0.378069 8_2:-67123606 Msa1263820:three_prime_UTR
GCATATTACTAGAGAAGAAT+TGG 0.378804 8_2:-67123952 Msa1263820:CDS
AAGACAGGCTTGGCTCGAAT+TGG 0.380610 8_2:-67124835 Msa1263820:CDS
ATTCAGTGGATTTAAAATAA+TGG 0.380620 8_2:+67123711 None:intergenic
AGGAATTACATGTTGCTTCC+TGG 0.391233 8_2:-67126356 Msa1263820:intron
GAGGTACTTCGTCGTAATTA+TGG 0.392346 8_2:-67126227 Msa1263820:CDS
CAAGGCAATGTTTGCAAACA+TGG 0.398987 8_2:-67124896 Msa1263820:CDS
ATAGATTATCAATACATTAT+GGG 0.400306 8_2:+67123305 None:intergenic
AGGAAAAGGAAGAAAAGAAA+AGG 0.400576 8_2:+67123255 None:intergenic
ACAACCTTGCTACGAAAATT+GGG 0.403439 8_2:+67123553 None:intergenic
GGGTGATGAAGCAACGATAA+AGG 0.405663 8_2:-67123904 Msa1263820:CDS
TTTCTTTGCAGAAACTGAAA+AGG 0.406051 8_2:-67126038 Msa1263820:intron
TTGATCTTACCAGCCCAAAA+AGG 0.410879 8_2:+67126143 None:intergenic
GGCTGAAGTGAAACAGCTTA+TGG 0.411627 8_2:-67124797 Msa1263820:CDS
ATGGATTGGTGAATACTTTG+AGG 0.416185 8_2:-67123587 Msa1263820:three_prime_UTR
GGCTGAGATTATGTATCTTC+AGG 0.419557 8_2:-67123179 Msa1263820:three_prime_UTR
TGACTATCTTGAATTCATAT+CGG 0.419719 8_2:-67124643 Msa1263820:CDS
ACGGGCAGTAAACTCATCTT+TGG 0.421789 8_2:+67127453 None:intergenic
ATGGAAAGGAAATAGACATT+TGG 0.433084 8_2:-67126208 Msa1263820:CDS
CGTTAAGTCTCTCGATCAAT+TGG 0.437925 8_2:+67123657 None:intergenic
CTTTCTGATATTGATGGCCA+TGG 0.454995 8_2:+67125968 None:intergenic
GATTATTGTGGTAGTTTCAA+AGG 0.457359 8_2:-67126376 Msa1263820:intron
AGAAGTGTCTTGCATATTCT+GGG 0.459931 8_2:+67123612 None:intergenic
AGGCTCTTGTTAATAGGAAA+AGG 0.469836 8_2:+67123241 None:intergenic
CAAGACACTTCTTCATGGAT+TGG 0.470691 8_2:-67123601 Msa1263820:three_prime_UTR
TATGCTCTTATTTGTGGTAG+AGG 0.471159 8_2:-67123399 Msa1263820:three_prime_UTR
TTACATCAATGTTCCACCTC+AGG 0.479275 8_2:-67127356 Msa1263820:intron
CTCCACCTTCTCTCATCCAC+GGG 0.480309 8_2:+67125534 None:intergenic
TGATTTCCTTAACCCGTATG+AGG 0.480616 8_2:-67123353 Msa1263820:three_prime_UTR
AAGGTGAAACTTACAAAGAA+AGG 0.486239 8_2:+67123221 None:intergenic
TTCTTTGCAGAAACTGAAAA+GGG 0.488753 8_2:-67126037 Msa1263820:intron
TCTCCACCTTCTCTCATCCA+CGG 0.506735 8_2:+67125533 None:intergenic
AAATTACTATCGACACCGGC+AGG 0.510158 8_2:+67127382 None:intergenic
GATAGAACTGCACTATCAAT+CGG 0.519441 8_2:+67125497 None:intergenic
GGATGGGAGAATAAATTATG+AGG 0.522634 8_2:-67123775 Msa1263820:CDS
ATCTAGAATGAAACAATTCA+GGG 0.522998 8_2:-67125477 Msa1263820:CDS
GAAATAGACATTTGGAGTGC+AGG 0.527784 8_2:-67126200 Msa1263820:CDS
AAATTCAGGCTCAAGACACT+TGG 0.528956 8_2:+67123444 None:intergenic
AGAAGAGATTAAAGGTCTCA+AGG 0.531463 8_2:-67124914 Msa1263820:CDS
ATATTTAATGCTATATTGGA+AGG 0.532580 8_2:-67126013 Msa1263820:CDS
AAAGTGCCAAAGATCTAGTC+CGG 0.532656 8_2:-67125949 Msa1263820:CDS
GAAAAGGAAGAAAAGAAAAG+GGG 0.533008 8_2:+67123257 None:intergenic
ATCACTTCTACAGAAGTCCT+TGG 0.539145 8_2:-67125896 Msa1263820:intron
AGGCTGATGTTGATGGAAAT+GGG 0.539230 8_2:-67124671 Msa1263820:CDS
GAGAAGTGGAATGCCACACC+AGG 0.542008 8_2:-67123736 Msa1263820:CDS
ACCCATTCCATGCTTTGTCA+TGG 0.542168 8_2:+67123923 None:intergenic
TCGACACCGGCAGGACGAGA+AGG 0.543696 8_2:+67127391 None:intergenic
TGCTTACTATGTTGCTCCTG+AGG 0.547457 8_2:-67126246 Msa1263820:CDS
TGAAGAACTGAAGACAGGCT+TGG 0.551989 8_2:-67124845 Msa1263820:CDS
TTATTTGGAAACAAGACGTA+TGG 0.553900 8_2:-67123200 Msa1263820:three_prime_UTR
GCATAGGCACAGACTTGAGC+GGG 0.554226 8_2:-67124613 Msa1263820:CDS
TAAAATAATGGTCCCTGGTG+TGG 0.556346 8_2:+67123723 None:intergenic
TGCCATGACAAAGCATGGAA+TGG 0.558094 8_2:-67123925 Msa1263820:CDS
GCCATGACAAAGCATGGAAT+GGG 0.560994 8_2:-67123924 Msa1263820:CDS
AGGTGATGATCTATGATGAC+GGG 0.562566 8_2:+67127435 None:intergenic
GAGACTGCCATGACAAAGCA+TGG 0.567560 8_2:-67123930 Msa1263820:CDS
TTCTGTGCAATGATGAGAAG+TGG 0.569079 8_2:-67123750 Msa1263820:CDS
TAATTACGACGAAGTACCTC+AGG 0.571853 8_2:+67126230 None:intergenic
GGATTTAAAATAATGGTCCC+TGG 0.579689 8_2:+67123718 None:intergenic
GGTAGAGGAAAGAATAATCA+CGG 0.583369 8_2:-67123384 Msa1263820:three_prime_UTR
CACCCGTGGATGAGAGAAGG+TGG 0.586292 8_2:-67125536 Msa1263820:CDS
AAAGGAAATCATTTCTGAGG+TGG 0.586336 8_2:-67123886 Msa1263820:CDS
ACTTATGAAGAACTGAAGAC+AGG 0.591721 8_2:-67124850 Msa1263820:CDS
GATAAAGGAAATCATTTCTG+AGG 0.597584 8_2:-67123889 Msa1263820:CDS
AATTGGATCAAGACTGTCTG+AGG 0.601026 8_2:-67124818 Msa1263820:CDS
ACTTCGTCGTAATTATGGAA+AGG 0.604529 8_2:-67126222 Msa1263820:CDS
TAGATTATCAATACATTATG+GGG 0.607292 8_2:+67123306 None:intergenic
CAGGTGATGATCTATGATGA+CGG 0.609122 8_2:+67127434 None:intergenic
TCATATCGGCTACAATGCAT+AGG 0.609185 8_2:-67124629 Msa1263820:CDS
GACACCGGCAGGACGAGAAG+GGG 0.619622 8_2:+67127393 None:intergenic
AAAGTTTACCGTGATATGGT+AGG 0.622747 8_2:-67126272 Msa1263820:CDS
GAACACCCGTGGATGAGAGA+AGG 0.623419 8_2:-67125539 Msa1263820:CDS
CACACAATAATGGGTTGTCA+CGG 0.625095 8_2:-67127496 None:intergenic
ATGAAATCGACTCCATTCAG+TGG 0.631210 8_2:+67123697 None:intergenic
AATGGGTTGTCACGGCAGCA+AGG 0.638772 8_2:-67127488 Msa1263820:CDS
TCGACTTTGTTAGTGAACCA+TGG 0.641429 8_2:-67125985 Msa1263820:CDS
GTAGAGGAAAGAATAATCAC+GGG 0.643516 8_2:-67123383 Msa1263820:three_prime_UTR
GAAGACTGTTGAACCTGAGG+TGG 0.650345 8_2:+67127343 None:intergenic
TGCATAGGCACAGACTTGAG+CGG 0.654593 8_2:-67124614 Msa1263820:CDS
ACTATCAATCGGTTTATCGG+AGG 0.661244 8_2:+67125508 None:intergenic
ACACCGGCAGGACGAGAAGG+GGG 0.662943 8_2:+67127394 None:intergenic
TTGTTTGGCAAGAACACCCG+TGG 0.663475 8_2:-67125550 Msa1263820:intron
ACGAAAATTACTATCGACAC+CGG 0.665382 8_2:+67127378 None:intergenic
GAGGAAAGAATAATCACGGG+AGG 0.675004 8_2:-67123380 Msa1263820:three_prime_UTR
AAGCACTGCCTACCATATCA+CGG 0.680125 8_2:+67126264 None:intergenic
AACATGGACACTGATAGTAG+TGG 0.718728 8_2:-67124880 Msa1263820:CDS
AGAAGTGGAATGCCACACCA+GGG 0.724546 8_2:-67123735 Msa1263820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTAAATAAATAAAAA+TGG + chr8_2:67124826-67124845 None:intergenic 0.0%
!! ACATAATTTAAACATTAACA+GGG + chr8_2:67123942-67123961 None:intergenic 15.0%
!!! TGTGATATATTTATAGTTTT+TGG - chr8_2:67124509-67124528 Msa1263820:intron 15.0%
!!! TTGAAAAATTAACACTTTTA+TGG - chr8_2:67124544-67124563 Msa1263820:intron 15.0%
!! TGTTAAAATTGTAAGATTTA+TGG - chr8_2:67126602-67126621 Msa1263820:intron 15.0%
!! ATAGATTATCAATACATTAT+GGG + chr8_2:67127313-67127332 None:intergenic 15.0%
!! AATAGATTATCAATACATTA+TGG + chr8_2:67127314-67127333 None:intergenic 15.0%
!! AACTTCTTTATATCTTCATA+GGG + chr8_2:67123392-67123411 None:intergenic 20.0%
!! AAACTTCTTTATATCTTCAT+AGG + chr8_2:67123393-67123412 None:intergenic 20.0%
!!! TCTTTTAATATCTTCTCTAT+CGG + chr8_2:67123537-67123556 None:intergenic 20.0%
!! CACATAATTTAAACATTAAC+AGG + chr8_2:67123943-67123962 None:intergenic 20.0%
!! AAATAGTAAATCAGATAAGT+TGG - chr8_2:67124124-67124143 Msa1263820:intron 20.0%
!!! AAAAATTAACACTTTTATGG+TGG - chr8_2:67124547-67124566 Msa1263820:intron 20.0%
!!! AAAATTAACACTTTTATGGT+GGG - chr8_2:67124548-67124567 Msa1263820:intron 20.0%
!! ATATTTAATGCTATATTGGA+AGG - chr8_2:67124602-67124621 Msa1263820:CDS 20.0%
!! TAGTATGTATTACAATACTT+GGG + chr8_2:67124946-67124965 None:intergenic 20.0%
!! ATAGTATGTATTACAATACT+TGG + chr8_2:67124947-67124966 None:intergenic 20.0%
!!! ACTATGATTAATGATTTGTT+TGG - chr8_2:67125050-67125069 Msa1263820:intron 20.0%
!!! ATATTGAACTCTAAAGTTTA+TGG - chr8_2:67125506-67125525 Msa1263820:CDS 20.0%
!!! ATAAAGTGAAGTTTTTCTTA+TGG + chr8_2:67126500-67126519 None:intergenic 20.0%
!!! AGAGTTTTCTTGATTAATTT+AGG + chr8_2:67126776-67126795 None:intergenic 20.0%
!!! ATTCAGTGGATTTAAAATAA+TGG + chr8_2:67126907-67126926 None:intergenic 20.0%
!!! ATTATTTTAAATCCACTGAA+TGG - chr8_2:67126906-67126925 Msa1263820:intron 20.0%
!!! TCTTTATACATTTTAGTTTC+AGG - chr8_2:67127136-67127155 Msa1263820:intron 20.0%
!! AGCATTTAACATAAAAATTC+AGG + chr8_2:67127188-67127207 None:intergenic 20.0%
!! GAAGTAAAAACTCAAATATA+TGG - chr8_2:67127284-67127303 Msa1263820:intron 20.0%
!! TAGATTATCAATACATTATG+GGG + chr8_2:67127312-67127331 None:intergenic 20.0%
!! ATAAAGAAGTTTTACACTCT+AGG - chr8_2:67123401-67123420 Msa1263820:three_prime_UTR 25.0%
! CGTGTAAATCTATATTAAAG+AGG - chr8_2:67123495-67123514 Msa1263820:three_prime_UTR 25.0%
! CCTTTAAACTCAACAATATT+CGG + chr8_2:67123593-67123612 None:intergenic 25.0%
!! GTGTTACTGTAATTTATTTC+AGG - chr8_2:67124319-67124338 Msa1263820:intron 25.0%
! ATATTGTATATTCTGCTTAG+TGG - chr8_2:67124442-67124461 Msa1263820:intron 25.0%
!! AAATTAACACTTTTATGGTG+GGG - chr8_2:67124549-67124568 Msa1263820:intron 25.0%
! GGGAATATTTAATGCTATAT+TGG - chr8_2:67124598-67124617 Msa1263820:CDS 25.0%
!! TAGTTCTTCTTTTAATCAAG+TGG - chr8_2:67124795-67124814 Msa1263820:CDS 25.0%
!! CATTTGAAACAAAAAGTCAA+AGG + chr8_2:67124887-67124906 None:intergenic 25.0%
! ACAAATCATTAATCATAGTC+AGG + chr8_2:67125049-67125068 None:intergenic 25.0%
!! TATCTAGAATGAAACAATTC+AGG - chr8_2:67125137-67125156 Msa1263820:intron 25.0%
!! ATCTAGAATGAAACAATTCA+GGG - chr8_2:67125138-67125157 Msa1263820:intron 25.0%
! ACCAACACAAATGAATTTAT+TGG + chr8_2:67125395-67125414 None:intergenic 25.0%
!! GTTTCTTGTAAAGTTTTCTT+TGG - chr8_2:67125413-67125432 Msa1263820:intron 25.0%
! TTGACATAAAACAGAAAAAC+TGG - chr8_2:67125482-67125501 Msa1263820:CDS 25.0%
! ATTCTATGAGTTTCATATTC+TGG - chr8_2:67125604-67125623 Msa1263820:intron 25.0%
!! GATATTTTTCTCCATTAACT+TGG - chr8_2:67125640-67125659 Msa1263820:intron 25.0%
! TTATCAGAAGAAGAGATTAA+AGG - chr8_2:67125693-67125712 Msa1263820:intron 25.0%
! TGACTATCTTGAATTCATAT+CGG - chr8_2:67125972-67125991 Msa1263820:CDS 25.0%
! TATTGTCCTTATCAAAATAC+TGG + chr8_2:67126050-67126069 None:intergenic 25.0%
!!! TATTTTGATAAGGACAATAG+TGG - chr8_2:67126051-67126070 Msa1263820:intron 25.0%
!!! ATTTTGATAAGGACAATAGT+GGG - chr8_2:67126052-67126071 Msa1263820:intron 25.0%
! GGGTTAGGAAAAAATAAATA+AGG + chr8_2:67126405-67126424 None:intergenic 25.0%
! CTAATGATTCTTAAACAAAC+AGG - chr8_2:67126819-67126838 Msa1263820:intron 25.0%
! TTTGTAAGTTTCACCTTATT+TGG - chr8_2:67127400-67127419 Msa1263820:CDS 25.0%
TTACACTCTAGGTAAAGAAT+TGG - chr8_2:67123412-67123431 Msa1263820:three_prime_UTR 30.0%
TACACTCTAGGTAAAGAATT+GGG - chr8_2:67123413-67123432 Msa1263820:three_prime_UTR 30.0%
TTTACACGCGTAATTTAAAC+CGG + chr8_2:67123483-67123502 None:intergenic 30.0%
CCGAATATTGTTGAGTTTAA+AGG - chr8_2:67123590-67123609 Msa1263820:three_prime_UTR 30.0%
!!! TGTGCACATTTGTCATTTTA+TGG - chr8_2:67123748-67123767 Msa1263820:CDS 30.0%
!!! GTGCACATTTGTCATTTTAT+GGG - chr8_2:67123749-67123768 Msa1263820:CDS 30.0%
! GAATTTCTTGCTTTCTAGTA+AGG - chr8_2:67123799-67123818 Msa1263820:intron 30.0%
CTTTCTGTCTTTATTGAAGA+AGG - chr8_2:67123857-67123876 Msa1263820:intron 30.0%
TCAATCTTACAACAACAAGT+TGG + chr8_2:67124017-67124036 None:intergenic 30.0%
! CAAGTATCATATCTTTTCGA+TGG + chr8_2:67124065-67124084 None:intergenic 30.0%
ACGAAAATACAACCTTTGTT+AGG + chr8_2:67124092-67124111 None:intergenic 30.0%
! ACAAAGGTTGTATTTTCGTT+TGG - chr8_2:67124093-67124112 Msa1263820:intron 30.0%
GTTTCTATTCCATATTCAGT+AGG - chr8_2:67124146-67124165 Msa1263820:intron 30.0%
CTGATTGTGTTTGATTATTG+TGG - chr8_2:67124227-67124246 Msa1263820:intron 30.0%
GATTATTGTGGTAGTTTCAA+AGG - chr8_2:67124239-67124258 Msa1263820:intron 30.0%
ATTATCAACCATGAAAGCAA+AGG + chr8_2:67124290-67124309 None:intergenic 30.0%
ATGGAAAGGAAATAGACATT+TGG - chr8_2:67124407-67124426 Msa1263820:intron 30.0%
TTTCTTTGCAGAAACTGAAA+AGG - chr8_2:67124577-67124596 Msa1263820:CDS 30.0%
TTCTTTGCAGAAACTGAAAA+GGG - chr8_2:67124578-67124597 Msa1263820:CDS 30.0%
TGATTGAACCATAATAGAAC+CGG + chr8_2:67124755-67124774 None:intergenic 30.0%
TTTAGATGCTAAACTGATAC+TGG + chr8_2:67124857-67124876 None:intergenic 30.0%
TGAAACAAAAAGTCAAAGGA+GGG + chr8_2:67124883-67124902 None:intergenic 30.0%
TTGAAACAAAAAGTCAAAGG+AGG + chr8_2:67124884-67124903 None:intergenic 30.0%
GAAAATGCAAATCAATGATG+AGG + chr8_2:67124994-67125013 None:intergenic 30.0%
! TCTAACTTTTCTATCACACA+TGG - chr8_2:67125023-67125042 Msa1263820:intron 30.0%
!! TGTTTTGTGTCCTTTTTTGT+CGG - chr8_2:67125225-67125244 Msa1263820:intron 30.0%
TGTCTGTAGAAATGGTATTA+TGG - chr8_2:67125252-67125271 Msa1263820:intron 30.0%
GCATTTATACAGCTTAATAG+TGG + chr8_2:67125373-67125392 None:intergenic 30.0%
GCCAATAAATTCATTTGTGT+TGG - chr8_2:67125391-67125410 Msa1263820:intron 30.0%
ATGAAACTCATAGAATGTTC+AGG + chr8_2:67125600-67125619 None:intergenic 30.0%
!!! ATATTCTGGCTTATCTTTTC+TGG - chr8_2:67125618-67125637 Msa1263820:intron 30.0%
!! ATTTTTCTCCATTAACTTGG+TGG - chr8_2:67125643-67125662 Msa1263820:intron 30.0%
AGAAATTTCCACCAAGTTAA+TGG + chr8_2:67125654-67125673 None:intergenic 30.0%
CACAGTTTCTGTTAAGTTTA+GGG + chr8_2:67125903-67125922 None:intergenic 30.0%
ACACAGTTTCTGTTAAGTTT+AGG + chr8_2:67125904-67125923 None:intergenic 30.0%
TCTTATGTATAACGTTTCTC+AGG - chr8_2:67125924-67125943 Msa1263820:CDS 30.0%
!!! AGCATTCCAGTATTTTGATA+AGG - chr8_2:67126041-67126060 Msa1263820:intron 30.0%
CGTTCAAACACAAAATGATT+TGG + chr8_2:67126131-67126150 None:intergenic 30.0%
AACTCATCTACAATAATAGC+AGG + chr8_2:67126214-67126233 None:intergenic 30.0%
TTTAATCTCCAAGTCAATGT+TGG - chr8_2:67126289-67126308 Msa1263820:intron 30.0%
! AAGTGAAGTTTTTCTTATGG+TGG + chr8_2:67126497-67126516 None:intergenic 30.0%
GCATATTACTAGAGAAGAAT+TGG - chr8_2:67126663-67126682 Msa1263820:intron 30.0%
GATAAAGGAAATCATTTCTG+AGG - chr8_2:67126726-67126745 Msa1263820:intron 30.0%
TGATTCTTAAACAAACAGGA+TGG - chr8_2:67126823-67126842 Msa1263820:intron 30.0%
GATTCTTAAACAAACAGGAT+GGG - chr8_2:67126824-67126843 Msa1263820:intron 30.0%
! TGAGTTTTTACTTCCTCATA+CGG + chr8_2:67127278-67127297 None:intergenic 30.0%
GAAAAGGAAGAAAAGAAAAG+GGG + chr8_2:67127361-67127380 None:intergenic 30.0%
GGAAAAGGAAGAAAAGAAAA+GGG + chr8_2:67127362-67127381 None:intergenic 30.0%
AGGAAAAGGAAGAAAAGAAA+AGG + chr8_2:67127363-67127382 None:intergenic 30.0%
AAAGAAAGGCTCTTGTTAAT+AGG + chr8_2:67127383-67127402 None:intergenic 30.0%
AAGGTGAAACTTACAAAGAA+AGG + chr8_2:67127397-67127416 None:intergenic 30.0%
!! ATACGTCTTGTTTCCAAATA+AGG + chr8_2:67127416-67127435 None:intergenic 30.0%
TTATTTGGAAACAAGACGTA+TGG - chr8_2:67127415-67127434 Msa1263820:CDS 30.0%
ACGAAAATTACTATCGACAC+CGG + chr8_2:67123240-67123259 None:intergenic 35.0%
AAGATGGTTGTATCAACCTT+CGG + chr8_2:67123362-67123381 None:intergenic 35.0%
!! AAGGTTGATACAACCATCTT+AGG - chr8_2:67123362-67123381 Msa1263820:three_prime_UTR 35.0%
TTCATAGGGTTTACCTAAGA+TGG + chr8_2:67123378-67123397 None:intergenic 35.0%
! TTTTGTACTGAGAATTCCAC+CGG - chr8_2:67123461-67123480 Msa1263820:three_prime_UTR 35.0%
!! TGAGTTTAAAGGTGCTTATG+AGG - chr8_2:67123601-67123620 Msa1263820:three_prime_UTR 35.0%
TTTGACAGGATTATTGCTCA+AGG - chr8_2:67123674-67123693 Msa1263820:three_prime_UTR 35.0%
CTAGAAAGCAAGAAATTCTC+AGG + chr8_2:67123797-67123816 None:intergenic 35.0%
! TTGCTTTCTAGTAAGGATGA+TGG - chr8_2:67123806-67123825 Msa1263820:intron 35.0%
! TGCTTTCTAGTAAGGATGAT+GGG - chr8_2:67123807-67123826 Msa1263820:intron 35.0%
GATACTTGACTTCCTAACAA+AGG - chr8_2:67124077-67124096 Msa1263820:intron 35.0%
TCAATTCGACCTACTGAATA+TGG + chr8_2:67124158-67124177 None:intergenic 35.0%
AGGAAAAGTTTACCGTGATA+TGG - chr8_2:67124339-67124358 Msa1263820:intron 35.0%
AAAGTTTACCGTGATATGGT+AGG - chr8_2:67124343-67124362 Msa1263820:intron 35.0%
ACTTCGTCGTAATTATGGAA+AGG - chr8_2:67124393-67124412 Msa1263820:intron 35.0%
TTGGCACTTTCTGATATTGA+TGG + chr8_2:67124656-67124675 None:intergenic 35.0%
GTAGAAGTGATTCTCTTCTT+TGG + chr8_2:67124710-67124729 None:intergenic 35.0%
! TGCACTATCAATCGGTTTAT+CGG + chr8_2:67125113-67125132 None:intergenic 35.0%
GATAGAACTGCACTATCAAT+CGG + chr8_2:67125121-67125140 None:intergenic 35.0%
GTTCAAGAAACTTGCATTGA+AGG - chr8_2:67125171-67125190 Msa1263820:intron 35.0%
TCTGAATGTGTTAACCTTCA+GGG + chr8_2:67125449-67125468 None:intergenic 35.0%
!! TATGGAAACTGCTGTCATTT+TGG - chr8_2:67125524-67125543 Msa1263820:CDS 35.0%
!!! TGTCATTTTGGAAGCTTAGA+TGG - chr8_2:67125536-67125555 Msa1263820:CDS 35.0%
! AACTTGGTGGAAATTTCTCT+AGG - chr8_2:67125656-67125675 Msa1263820:intron 35.0%
GTGGAAATTTCTCTAGGTTA+TGG - chr8_2:67125662-67125681 Msa1263820:intron 35.0%
AGAAGAGATTAAAGGTCTCA+AGG - chr8_2:67125701-67125720 Msa1263820:intron 35.0%
ACTTATGAAGAACTGAAGAC+AGG - chr8_2:67125765-67125784 Msa1263820:intron 35.0%
GCATTCAACTAGTTATGCTT+TGG + chr8_2:67125870-67125889 None:intergenic 35.0%
TCAAGTTTAGTCGAATGTGA+TGG + chr8_2:67126321-67126340 None:intergenic 35.0%
! CTAAACTTGACAGGACATTT+TGG - chr8_2:67126331-67126350 Msa1263820:intron 35.0%
CAATGTGCATGACATAGATA+AGG + chr8_2:67126365-67126384 None:intergenic 35.0%
TATGTCATGCACATTGATAC+TGG - chr8_2:67126369-67126388 Msa1263820:intron 35.0%
CTTTATGAATTCCTAACCTC+TGG - chr8_2:67126514-67126533 Msa1263820:intron 35.0%
TAAATATTCCTAAGTGCCAG+AGG + chr8_2:67126533-67126552 None:intergenic 35.0%
CATTTGCTTCTGTAAATTCC+CGG - chr8_2:67126636-67126655 Msa1263820:intron 35.0%
! AAAGGAAATCATTTCTGAGG+TGG - chr8_2:67126729-67126748 Msa1263820:intron 35.0%
GGATGGGAGAATAAATTATG+AGG - chr8_2:67126840-67126859 Msa1263820:intron 35.0%
! GGATTTAAAATAATGGTCCC+TGG + chr8_2:67126900-67126919 None:intergenic 35.0%
!! AGAAGTGTCTTGCATATTCT+GGG + chr8_2:67127006-67127025 None:intergenic 35.0%
!! AAGAAGTGTCTTGCATATTC+TGG + chr8_2:67127007-67127026 None:intergenic 35.0%
ATATGCAAGACACTTCTTCA+TGG - chr8_2:67127009-67127028 Msa1263820:intron 35.0%
!! ATGGATTGGTGAATACTTTG+AGG - chr8_2:67127028-67127047 Msa1263820:intron 35.0%
ACAACCTTGCTACGAAAATT+GGG + chr8_2:67127065-67127084 None:intergenic 35.0%
AACAACCTTGCTACGAAAAT+TGG + chr8_2:67127066-67127085 None:intergenic 35.0%
!!! TATTTTTAGTACCACACGCA+CGG + chr8_2:67127090-67127109 None:intergenic 35.0%
! CAGTGTTATGCTCTTATTTG+TGG - chr8_2:67127210-67127229 Msa1263820:intron 35.0%
! TATGCTCTTATTTGTGGTAG+AGG - chr8_2:67127216-67127235 Msa1263820:intron 35.0%
GGTAGAGGAAAGAATAATCA+CGG - chr8_2:67127231-67127250 Msa1263820:intron 35.0%
GTAGAGGAAAGAATAATCAC+GGG - chr8_2:67127232-67127251 Msa1263820:intron 35.0%
! GAGTTTTTACTTCCTCATAC+GGG + chr8_2:67127277-67127296 None:intergenic 35.0%
AGGCTCTTGTTAATAGGAAA+AGG + chr8_2:67127377-67127396 None:intergenic 35.0%
AGGTGATGATCTATGATGAC+GGG + chr8_2:67123183-67123202 None:intergenic 40.0%
CAGGTGATGATCTATGATGA+CGG + chr8_2:67123184-67123203 None:intergenic 40.0%
TTACATCAATGTTCCACCTC+AGG - chr8_2:67123259-67123278 Msa1263820:three_prime_UTR 40.0%
!!! AGGGTTTTGGATTTGAGGAT+GGG + chr8_2:67123310-67123329 None:intergenic 40.0%
AATTGGGTCGAGGTCAATTT+GGG - chr8_2:67123429-67123448 Msa1263820:three_prime_UTR 40.0%
ATTCTCTGTGCATCTTGTGA+TGG - chr8_2:67123628-67123647 Msa1263820:three_prime_UTR 40.0%
! AGCTGCTGCTTCTATTTGTA+GGG - chr8_2:67123712-67123731 Msa1263820:exon 40.0%
! GCTTTCTAGTAAGGATGATG+GGG - chr8_2:67123808-67123827 Msa1263820:intron 40.0%
!!! GCACTTAAGGCTACTGATTT+TGG - chr8_2:67123833-67123852 Msa1263820:intron 40.0%
! AGGAATTACATGTTGCTTCC+TGG - chr8_2:67124259-67124278 Msa1263820:intron 40.0%
ATGAAAGCAAAGGAGATACC+AGG + chr8_2:67124280-67124299 None:intergenic 40.0%
TGGTATCTCCTTTGCTTTCA+TGG - chr8_2:67124279-67124298 Msa1263820:intron 40.0%
! TAATTACGACGAAGTACCTC+AGG + chr8_2:67124388-67124407 None:intergenic 40.0%
! GAGGTACTTCGTCGTAATTA+TGG - chr8_2:67124388-67124407 Msa1263820:intron 40.0%
! GAAATAGACATTTGGAGTGC+AGG - chr8_2:67124415-67124434 Msa1263820:intron 40.0%
! TTAGTGGTGTACCACCTTTT+TGG - chr8_2:67124458-67124477 Msa1263820:intron 40.0%
! TAGTGGTGTACCACCTTTTT+GGG - chr8_2:67124459-67124478 Msa1263820:intron 40.0%
TTGATCTTACCAGCCCAAAA+AGG + chr8_2:67124475-67124494 None:intergenic 40.0%
TCGACTTTGTTAGTGAACCA+TGG - chr8_2:67124630-67124649 Msa1263820:CDS 40.0%
! CTTTCTGATATTGATGGCCA+TGG + chr8_2:67124650-67124669 None:intergenic 40.0%
! AAAGTGCCAAAGATCTAGTC+CGG - chr8_2:67124666-67124685 Msa1263820:CDS 40.0%
GTGATTCTCTTCTTTGGATC+TGG + chr8_2:67124704-67124723 None:intergenic 40.0%
ATCACTTCTACAGAAGTCCT+TGG - chr8_2:67124719-67124738 Msa1263820:intron 40.0%
!! CTAGACTACCGGTTCTATTA+TGG - chr8_2:67124744-67124763 Msa1263820:intron 40.0%
TACAATACTTGGGATAGCAG+AGG + chr8_2:67124936-67124955 None:intergenic 40.0%
! ACTATCAATCGGTTTATCGG+AGG + chr8_2:67125110-67125129 None:intergenic 40.0%
CAGACAATGACCGACAAAAA+AGG + chr8_2:67125238-67125257 None:intergenic 40.0%
TCGGTCATTGTCTGTAGAAA+TGG - chr8_2:67125244-67125263 Msa1263820:intron 40.0%
TTGGTAAAAACATGCCCTGA+AGG - chr8_2:67125432-67125451 Msa1263820:intron 40.0%
GTCTGAATGTGTTAACCTTC+AGG + chr8_2:67125450-67125469 None:intergenic 40.0%
CAAGGCAATGTTTGCAAACA+TGG - chr8_2:67125719-67125738 Msa1263820:intron 40.0%
AACATGGACACTGATAGTAG+TGG - chr8_2:67125735-67125754 Msa1263820:intron 40.0%
AATTGGATCAAGACTGTCTG+AGG - chr8_2:67125797-67125816 Msa1263820:intron 40.0%
! AGGCTGATGTTGATGGAAAT+GGG - chr8_2:67125944-67125963 Msa1263820:CDS 40.0%
! TCATATCGGCTACAATGCAT+AGG - chr8_2:67125986-67126005 Msa1263820:CDS 40.0%
! GGTAATGTCCAACATTGACT+TGG + chr8_2:67126300-67126319 None:intergenic 40.0%
CACATTCGACTAAACTTGAC+AGG - chr8_2:67126322-67126341 Msa1263820:intron 40.0%
! TTTTCCTAACCCCTTCACTA+TGG - chr8_2:67126413-67126432 Msa1263820:intron 40.0%
TTTCCTAACCCCTTCACTAT+GGG - chr8_2:67126414-67126433 Msa1263820:intron 40.0%
ATATACTCCCCATAGTGAAG+GGG + chr8_2:67126425-67126444 None:intergenic 40.0%
CATATACTCCCCATAGTGAA+GGG + chr8_2:67126426-67126445 None:intergenic 40.0%
TCATATACTCCCCATAGTGA+AGG + chr8_2:67126427-67126446 None:intergenic 40.0%
CGGGAATTTACAGAAGCAAA+TGG + chr8_2:67126638-67126657 None:intergenic 40.0%
TCTCTAGTAATATGCCTGTC+CGG + chr8_2:67126658-67126677 None:intergenic 40.0%
TTCTGTGCAATGATGAGAAG+TGG - chr8_2:67126865-67126884 Msa1263820:intron 40.0%
TAAAATAATGGTCCCTGGTG+TGG + chr8_2:67126895-67126914 None:intergenic 40.0%
! ATGAAATCGACTCCATTCAG+TGG + chr8_2:67126921-67126940 None:intergenic 40.0%
CGTTAAGTCTCTCGATCAAT+TGG + chr8_2:67126961-67126980 None:intergenic 40.0%
ATCGAGAGACTTAACGTTGT+TGG - chr8_2:67126965-67126984 Msa1263820:intron 40.0%
CAAGACACTTCTTCATGGAT+TGG - chr8_2:67127014-67127033 Msa1263820:intron 40.0%
! CAATCCCAATTTTCGTAGCA+AGG - chr8_2:67127058-67127077 Msa1263820:intron 40.0%
AAATTCAGGCTCAAGACACT+TGG + chr8_2:67127174-67127193 None:intergenic 40.0%
TGATTTCCTTAACCCGTATG+AGG - chr8_2:67127262-67127281 Msa1263820:intron 40.0%
! TTACTTCCTCATACGGGTTA+AGG + chr8_2:67127271-67127290 None:intergenic 40.0%
GGCTGAGATTATGTATCTTC+AGG - chr8_2:67127436-67127455 Msa1263820:CDS 40.0%
ACGGGCAGTAAACTCATCTT+TGG + chr8_2:67123165-67123184 None:intergenic 45.0%
AAATTACTATCGACACCGGC+AGG + chr8_2:67123236-67123255 None:intergenic 45.0%
GTTGAAGACTGTTGAACCTG+AGG + chr8_2:67123278-67123297 None:intergenic 45.0%
!!! GGGTTTTGGATTTGAGGATG+GGG + chr8_2:67123309-67123328 None:intergenic 45.0%
!!! GAGGGTTTTGGATTTGAGGA+TGG + chr8_2:67123311-67123330 None:intergenic 45.0%
CTAGGTAAAGAATTGGGTCG+AGG - chr8_2:67123419-67123438 Msa1263820:three_prime_UTR 45.0%
GAATTGGGTCGAGGTCAATT+TGG - chr8_2:67123428-67123447 Msa1263820:three_prime_UTR 45.0%
ACACGCGTAATTTAAACCGG+TGG + chr8_2:67123480-67123499 None:intergenic 45.0%
CAGATTCTGCAGCATTTGTC+TGG - chr8_2:67123563-67123582 Msa1263820:three_prime_UTR 45.0%
! CTTGTGATGGAACTTTGTGC+TGG - chr8_2:67123641-67123660 Msa1263820:three_prime_UTR 45.0%
! GAGCTGCTGCTTCTATTTGT+AGG - chr8_2:67123711-67123730 Msa1263820:exon 45.0%
! AAGCACTGCCTACCATATCA+CGG + chr8_2:67124354-67124373 None:intergenic 45.0%
TGCTTACTATGTTGCTCCTG+AGG - chr8_2:67124369-67124388 Msa1263820:intron 45.0%
ATCTTACCAGCCCAAAAAGG+TGG + chr8_2:67124472-67124491 None:intergenic 45.0%
! CATCTTCCGGACTAGATCTT+TGG + chr8_2:67124675-67124694 None:intergenic 45.0%
AGTCCTTGGTACTAGACTAC+CGG - chr8_2:67124733-67124752 Msa1263820:intron 45.0%
GACTTGAGTGAAAGCAAACG+AGG + chr8_2:67125311-67125330 None:intergenic 45.0%
! ACTAGGTGGGTTTAGCTACA+TGG - chr8_2:67125339-67125358 Msa1263820:intron 45.0%
TGAAGAACTGAAGACAGGCT+TGG - chr8_2:67125770-67125789 Msa1263820:intron 45.0%
GGCTGAAGTGAAACAGCTTA+TGG - chr8_2:67125818-67125837 Msa1263820:intron 45.0%
GTTTCTCAGGCTGATGTTGA+TGG - chr8_2:67125937-67125956 Msa1263820:CDS 45.0%
! CAGGCTGATGTTGATGGAAA+TGG - chr8_2:67125943-67125962 Msa1263820:CDS 45.0%
!! ACATTGATACTGGCTCACTC+TGG - chr8_2:67126379-67126398 Msa1263820:intron 45.0%
TTCCTAACCCCTTCACTATG+GGG - chr8_2:67126415-67126434 Msa1263820:intron 45.0%
ATTCCTAACCTCTGGCACTT+AGG - chr8_2:67126522-67126541 Msa1263820:intron 45.0%
ATTCCTAAGTGCCAGAGGTT+AGG + chr8_2:67126528-67126547 None:intergenic 45.0%
CTCTAGTAATATGCCTGTCC+GGG + chr8_2:67126657-67126676 None:intergenic 45.0%
TGCCATGACAAAGCATGGAA+TGG - chr8_2:67126690-67126709 Msa1263820:intron 45.0%
GCCATGACAAAGCATGGAAT+GGG - chr8_2:67126691-67126710 Msa1263820:intron 45.0%
ACCCATTCCATGCTTTGTCA+TGG + chr8_2:67126695-67126714 None:intergenic 45.0%
GGGTGATGAAGCAACGATAA+AGG - chr8_2:67126711-67126730 Msa1263820:intron 45.0%
GAGGAAAGAATAATCACGGG+AGG - chr8_2:67127235-67127254 Msa1263820:intron 45.0%
!!! TTTTTTTTTTTTTGATATAT+GGG + chr8_2:67126104-67126123 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTGATATA+TGG + chr8_2:67126105-67126124 None:intergenic 5.0%
GAAGACTGTTGAACCTGAGG+TGG + chr8_2:67123275-67123294 None:intergenic 50.0%
!!! GGCAGAGGGTTTTGGATTTG+AGG + chr8_2:67123315-67123334 None:intergenic 50.0%
! GTGATGGAACTTTGTGCTGG+TGG - chr8_2:67123644-67123663 Msa1263820:three_prime_UTR 50.0%
! CTGGTGGTGAGTTGTTTGAC+AGG - chr8_2:67123660-67123679 Msa1263820:three_prime_UTR 50.0%
! GATCTGGTGTCAGCATCTTC+CGG + chr8_2:67124688-67124707 None:intergenic 50.0%
GAACCGGTAGTCTAGTACCA+AGG + chr8_2:67124739-67124758 None:intergenic 50.0%
TTGTTTGGCAAGAACACCCG+TGG - chr8_2:67125065-67125084 Msa1263820:intron 50.0%
TCTCCACCTTCTCTCATCCA+CGG + chr8_2:67125085-67125104 None:intergenic 50.0%
ACTCAAGTCGCCATCTCACT+AGG - chr8_2:67125322-67125341 Msa1263820:intron 50.0%
AAGTCGCCATCTCACTAGGT+GGG - chr8_2:67125326-67125345 Msa1263820:intron 50.0%
GCTAAACCCACCTAGTGAGA+TGG + chr8_2:67125335-67125354 None:intergenic 50.0%
! AAGACAGGCTTGGCTCGAAT+TGG - chr8_2:67125780-67125799 Msa1263820:intron 50.0%
TGCATAGGCACAGACTTGAG+CGG - chr8_2:67126001-67126020 Msa1263820:CDS 50.0%
!!! GACAGGACATTTTGGCTCGA+TGG - chr8_2:67126339-67126358 Msa1263820:intron 50.0%
GCTTCTGTAAATTCCCGGAC+AGG - chr8_2:67126641-67126660 Msa1263820:intron 50.0%
GAGACTGCCATGACAAAGCA+TGG - chr8_2:67126685-67126704 Msa1263820:intron 50.0%
AGAAGTGGAATGCCACACCA+GGG - chr8_2:67126880-67126899 Msa1263820:intron 50.0%
!! CTTCGGCTGCACTGGTTTGT+GGG + chr8_2:67123345-67123364 None:intergenic 55.0%
GTATCAACCTTCGGCTGCAC+TGG + chr8_2:67123353-67123372 None:intergenic 55.0%
!! GGATGATGGGGCAGCACTTA+AGG - chr8_2:67123820-67123839 Msa1263820:intron 55.0%
!! GGTGTACCACCTTTTTGGGC+TGG - chr8_2:67124463-67124482 Msa1263820:intron 55.0%
GAACACCCGTGGATGAGAGA+AGG - chr8_2:67125076-67125095 Msa1263820:intron 55.0%
CTCCACCTTCTCTCATCCAC+GGG + chr8_2:67125084-67125103 None:intergenic 55.0%
CAAGTCGCCATCTCACTAGG+TGG - chr8_2:67125325-67125344 Msa1263820:intron 55.0%
GCATAGGCACAGACTTGAGC+GGG - chr8_2:67126002-67126021 Msa1263820:CDS 55.0%
CTCCCCATAGTGAAGGGGTT+AGG + chr8_2:67126420-67126439 None:intergenic 55.0%
GAGAAGTGGAATGCCACACC+AGG - chr8_2:67126879-67126898 Msa1263820:intron 55.0%
! CAAGGTTGTTTCCGTGCGTG+TGG - chr8_2:67127076-67127095 Msa1263820:intron 55.0%
! GCAGTGGTGGCAGAGGGTTT+TGG + chr8_2:67123323-67123342 None:intergenic 60.0%
TTGTGGGCAGTGGTGGCAGA+GGG + chr8_2:67123329-67123348 None:intergenic 60.0%
TTTGTGGGCAGTGGTGGCAG+AGG + chr8_2:67123330-67123349 None:intergenic 60.0%
!! CACTGGTTTGTGGGCAGTGG+TGG + chr8_2:67123336-67123355 None:intergenic 60.0%
!! CTGCACTGGTTTGTGGGCAG+TGG + chr8_2:67123339-67123358 None:intergenic 60.0%
!! CCTTCGGCTGCACTGGTTTG+TGG + chr8_2:67123346-67123365 None:intergenic 60.0%
CCACAAACCAGTGCAGCCGA+AGG - chr8_2:67123343-67123362 Msa1263820:three_prime_UTR 60.0%
CACCCGTGGATGAGAGAAGG+TGG - chr8_2:67125079-67125098 Msa1263820:intron 60.0%
! ACGAGAAGGGGGTGCAGCAG+CGG + chr8_2:67123213-67123232 None:intergenic 65.0%
ACACCGGCAGGACGAGAAGG+GGG + chr8_2:67123224-67123243 None:intergenic 65.0%
GACACCGGCAGGACGAGAAG+GGG + chr8_2:67123225-67123244 None:intergenic 65.0%
CGACACCGGCAGGACGAGAA+GGG + chr8_2:67123226-67123245 None:intergenic 65.0%
TCGACACCGGCAGGACGAGA+AGG + chr8_2:67123227-67123246 None:intergenic 65.0%
! AAGGGGGTGCAGCAGCGGGA+CGG + chr8_2:67123208-67123227 None:intergenic 70.0%
! CGAGAAGGGGGTGCAGCAGC+GGG + chr8_2:67123212-67123231 None:intergenic 70.0%
GCACCCCCTTCTCGTCCTGC+CGG - chr8_2:67123218-67123237 Msa1263820:three_prime_UTR 70.0%
! AGGGGGTGCAGCAGCGGGAC+GGG + chr8_2:67123207-67123226 None:intergenic 75.0%
! GGTGCAGCAGCGGGACGGGC+AGG + chr8_2:67123203-67123222 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 67123128 67127509 67123128 ID=Msa1263820;Name=Msa1263820
chr8_2 mRNA 67123128 67127509 67123128 ID=Msa1263820-mRNA-1;Parent=Msa1263820;Name=Msa1263820-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0.75|0.77|1|1|1|9|594|354
chr8_2 exon 67123128 67123796 67123128 ID=Msa1263820-mRNA-1:exon:22040;Parent=Msa1263820-mRNA-1
chr8_2 exon 67123875 67123974 67123875 ID=Msa1263820-mRNA-1:exon:22039;Parent=Msa1263820-mRNA-1
chr8_2 exon 67124564 67124691 67124564 ID=Msa1263820-mRNA-1:exon:22038;Parent=Msa1263820-mRNA-1
chr8_2 exon 67124792 67124959 67124792 ID=Msa1263820-mRNA-1:exon:22037;Parent=Msa1263820-mRNA-1
chr8_2 exon 67125445 67125560 67125445 ID=Msa1263820-mRNA-1:exon:22036;Parent=Msa1263820-mRNA-1
chr8_2 exon 67125897 67126049 67125897 ID=Msa1263820-mRNA-1:exon:22035;Parent=Msa1263820-mRNA-1
chr8_2 exon 67126153 67126296 67126153 ID=Msa1263820-mRNA-1:exon:22034;Parent=Msa1263820-mRNA-1
chr8_2 exon 67126357 67126384 67126357 ID=Msa1263820-mRNA-1:exon:22033;Parent=Msa1263820-mRNA-1
chr8_2 exon 67127357 67127509 67127357 ID=Msa1263820-mRNA-1:exon:22032;Parent=Msa1263820-mRNA-1
chr8_2 CDS 67127357 67127509 67127357 ID=Msa1263820-mRNA-1:cds;Parent=Msa1263820-mRNA-1
chr8_2 CDS 67126357 67126384 67126357 ID=Msa1263820-mRNA-1:cds;Parent=Msa1263820-mRNA-1
chr8_2 CDS 67126153 67126296 67126153 ID=Msa1263820-mRNA-1:cds;Parent=Msa1263820-mRNA-1
chr8_2 CDS 67125897 67126049 67125897 ID=Msa1263820-mRNA-1:cds;Parent=Msa1263820-mRNA-1
chr8_2 CDS 67125445 67125560 67125445 ID=Msa1263820-mRNA-1:cds;Parent=Msa1263820-mRNA-1
chr8_2 CDS 67124792 67124959 67124792 ID=Msa1263820-mRNA-1:cds;Parent=Msa1263820-mRNA-1
chr8_2 CDS 67124564 67124691 67124564 ID=Msa1263820-mRNA-1:cds;Parent=Msa1263820-mRNA-1
chr8_2 CDS 67123875 67123974 67123875 ID=Msa1263820-mRNA-1:cds;Parent=Msa1263820-mRNA-1
chr8_2 CDS 67123722 67123796 67123722 ID=Msa1263820-mRNA-1:cds;Parent=Msa1263820-mRNA-1
chr8_2 three_prime_UTR 67123128 67123721 67123128 ID=Msa1263820-mRNA-1:three_prime_utr;Parent=Msa1263820-mRNA-1
Gene Sequence

>Msa1263820

ATGGGTTGTCACGGCAGCAAGGAGAAGAAACATGCCAAAGATGAGTTTACTGCCCGTCATCATAGATCATCACCTGCCCGTCCCGCTGCTGCACCCCCTTCTCGTCCTGCCGGTGTCGATAGTAATTTTCGTTACATCAATGTTCCACCTCAGTTTCAAAGGAATTACATGTTGCTTCCTGGAAAAGTTTACCGTGATATGGTAGGCAGTGCTTACTATGTTGCTCCTGAGGTACTTCGTCGTAATTATGGAAAGGAAATAGACATTTGGAGTGCAGGCATCATATTGTATATTCTGCTTAGTGGTGTACCACCTTTTTGGGCTGAAACTGAAAAGGGAATATTTAATGCTATATTGGAAGGTGAACTCGACTTTGTTAGTGAACCATGGCCATCAATATCAGAAAGTGCCAAAGATCTAGTCCGGAAGATGCTGACACCAGATCCAAAGAAGAGAATCACTTCTACAGAAGTCCTTGAACACCCGTGGATGAGAGAAGGTGGAGAAGCCTCCGATAAACCGATTGATAGTGCAGTTCTATCTAGAATGAAACAATTCAGGGCAATGAACAAGTTCAAGAAACTTGCATTGAAGGTTATGGCTGAAAATTTATCAGAAGAAGAGATTAAAGGTCTCAAGGCAATGTTTGCAAACATGGACACTGATAGTAGTGGCACGATCACTTATGAAGAACTGAAGACAGGCTTGGCTCGAATTGGATCAAGACTGTCTGAGGCTGAAGTGAAACAGCTTATGGAAGCTGCTGATGTTGATGGAAATGGGTCGATTGACTATCTTGAATTCATATCGGCTACAATGCATAGGCACAGACTTGAGCGGGATGAACATCTTTACAAAGCATTCCAGTATTTTGATAAGGACAATAGTGGGCATATTACTAGAGAAGAATTGGAGACTGCCATGACAAAGCATGGAATGGGTGATGAAGCAACGATAAAGGAAATCATTTCTGAGGTGGATACAGATAATGATGGGAGAATAAATTATGAGGAATTCTGTGCAATGATGAGAAGTGGAATGCCACACCAGGGACCATTATTTTAA
Protein sequence

>Msa1263820

MGCHGSKEKKHAKDEFTARHHRSSPARPAAAPPSRPAGVDSNFRYINVPPQFQRNYMLLPGKVYRDMVGSAYYVAPEVLRRNYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFNAILEGELDFVSEPWPSISESAKDLVRKMLTPDPKKRITSTEVLEHPWMREGGEASDKPIDSAVLSRMKQFRAMNKFKKLALKVMAENLSEEEIKGLKAMFANMDTDSSGTITYEELKTGLARIGSRLSEAEVKQLMEAADVDGNGSIDYLEFISATMHRHRLERDEHLYKAFQYFDKDNSGHITREELETAMTKHGMGDEATIKEIISEVDTDNDGRINYEEFCAMMRSGMPHQGPLF*