Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1459910 | KEH28480.1 | 98.174 | 493 | 8 | 1 | 1 | 492 | 1 | 493 | 0.0 | 952 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1459910 | sp|Q8W034|RNP1_ARATH | 56.995 | 193 | 77 | 2 | 1 | 188 | 1 | 192 | 1.80e-74 | 243 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1459910 | A0A072URI5 | 98.174 | 493 | 8 | 1 | 1 | 492 | 1 | 493 | 0.0 | 952 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012940 | Msa1459910 | 0.852593 | 4.169302e-61 | -8.615850e-47 |
| Msa0016540 | Msa1459910 | 0.824554 | 7.580295e-54 | -8.615850e-47 |
| Msa0032020 | Msa1459910 | 0.865400 | 6.069496e-65 | -8.615850e-47 |
| Msa0033880 | Msa1459910 | 0.815564 | 8.667066e-52 | -8.615850e-47 |
| Msa0041690 | Msa1459910 | 0.836502 | 9.011357e-57 | -8.615850e-47 |
| Msa0047640 | Msa1459910 | 0.832721 | 8.040234e-56 | -8.615850e-47 |
| Msa0052870 | Msa1459910 | 0.822645 | 2.120589e-53 | -8.615850e-47 |
| Msa0062350 | Msa1459910 | 0.826025 | 3.401857e-54 | -8.615850e-47 |
| Msa0069600 | Msa1459910 | 0.816066 | 6.695952e-52 | -8.615850e-47 |
| Msa0077540 | Msa1459910 | 0.809107 | 2.228485e-50 | -8.615850e-47 |
| Msa0080250 | Msa1459910 | 0.818390 | 2.009752e-52 | -8.615850e-47 |
| Msa0092940 | Msa1459910 | 0.811424 | 7.050858e-51 | -8.615850e-47 |
| Msa0097950 | Msa1459910 | 0.811879 | 5.614551e-51 | -8.615850e-47 |
| Msa0098470 | Msa1459910 | 0.803703 | 3.071685e-49 | -8.615850e-47 |
| Msa0116790 | Msa1459910 | 0.812673 | 3.765686e-51 | -8.615850e-47 |
| Msa1354200 | Msa1459910 | 0.802971 | 4.355800e-49 | -8.615850e-47 |
| Msa1356610 | Msa1459910 | 0.812371 | 4.384508e-51 | -8.615850e-47 |
| Msa1358980 | Msa1459910 | 0.816020 | 6.858328e-52 | -8.615850e-47 |
| Msa1368080 | Msa1459910 | 0.806767 | 7.011781e-50 | -8.615850e-47 |
| Msa1373170 | Msa1459910 | 0.871810 | 5.145569e-67 | -8.615850e-47 |
| Msa1373820 | Msa1459910 | 0.847028 | 1.498603e-59 | -8.615850e-47 |
| Msa1385810 | Msa1459910 | 0.835151 | 1.982816e-56 | -8.615850e-47 |
| Msa1391480 | Msa1459910 | 0.823359 | 1.445532e-53 | -8.615850e-47 |
| Msa1393820 | Msa1459910 | 0.809253 | 2.073488e-50 | -8.615850e-47 |
| Msa1398790 | Msa1459910 | 0.818656 | 1.749410e-52 | -8.615850e-47 |
| Msa1403560 | Msa1459910 | 0.810217 | 1.286114e-50 | -8.615850e-47 |
| Msa1403570 | Msa1459910 | 0.867136 | 1.709080e-65 | -8.615850e-47 |
| Msa1409260 | Msa1459910 | 0.843053 | 1.775120e-58 | -8.615850e-47 |
| Msa1411500 | Msa1459910 | 0.863379 | 2.596140e-64 | -8.615850e-47 |
| Msa1411950 | Msa1459910 | 0.832786 | 7.750334e-56 | -8.615850e-47 |
| Msa1427160 | Msa1459910 | 0.845928 | 2.990054e-59 | -8.615850e-47 |
| Msa1432480 | Msa1459910 | 0.802273 | 6.067227e-49 | -8.615850e-47 |
| Msa1435440 | Msa1459910 | 0.814112 | 1.818776e-51 | -8.615850e-47 |
| Msa1438450 | Msa1459910 | 0.814155 | 1.779579e-51 | -8.615850e-47 |
| Msa1443300 | Msa1459910 | 0.806392 | 8.409562e-50 | -8.615850e-47 |
| Msa1443310 | Msa1459910 | 0.819297 | 1.250661e-52 | -8.615850e-47 |
| Msa1459910 | Msa1460880 | 0.803802 | 2.929899e-49 | -8.615850e-47 |
| Msa0610090 | Msa1459910 | 0.825675 | 4.118763e-54 | -8.615850e-47 |
| Msa0619860 | Msa1459910 | 0.803769 | 2.976135e-49 | -8.615850e-47 |
| Msa0626270 | Msa1459910 | 0.808249 | 3.398341e-50 | -8.615850e-47 |
| Msa0630940 | Msa1459910 | 0.801066 | 1.072788e-48 | -8.615850e-47 |
| Msa0633570 | Msa1459910 | 0.838589 | 2.628482e-57 | -8.615850e-47 |
| Msa0644030 | Msa1459910 | 0.831016 | 2.119420e-55 | -8.615850e-47 |
| Msa0647430 | Msa1459910 | 0.802787 | 4.753931e-49 | -8.615850e-47 |
| Msa0656810 | Msa1459910 | 0.876140 | 1.769078e-68 | -8.615850e-47 |
| Msa0658480 | Msa1459910 | 0.834962 | 2.212922e-56 | -8.615850e-47 |
| Msa0659550 | Msa1459910 | 0.805599 | 1.234839e-49 | -8.615850e-47 |
| Msa0669180 | Msa1459910 | 0.830113 | 3.525535e-55 | -8.615850e-47 |
| Msa0679100 | Msa1459910 | 0.801337 | 9.442719e-49 | -8.615850e-47 |
| Msa0687230 | Msa1459910 | 0.817957 | 2.518605e-52 | -8.615850e-47 |
| Msa0692880 | Msa1459910 | 0.811327 | 7.400203e-51 | -8.615850e-47 |
| Msa0698100 | Msa1459910 | 0.808142 | 3.581588e-50 | -8.615850e-47 |
| Msa0716860 | Msa1459910 | 0.810893 | 9.192435e-51 | -8.615850e-47 |
| Msa0739080 | Msa1459910 | 0.807036 | 6.149480e-50 | -8.615850e-47 |
| Msa0742510 | Msa1459910 | 0.826966 | 2.029271e-54 | -8.615850e-47 |
| Msa0744100 | Msa1459910 | 0.820750 | 5.814873e-53 | -8.615850e-47 |
| Msa0744180 | Msa1459910 | 0.817954 | 2.521759e-52 | -8.615850e-47 |
| Msa0749400 | Msa1459910 | 0.809326 | 2.000005e-50 | -8.615850e-47 |
| Msa0760770 | Msa1459910 | 0.827259 | 1.727064e-54 | -8.615850e-47 |
| Msa0771090 | Msa1459910 | 0.810416 | 1.165275e-50 | -8.615850e-47 |
| Msa0779550 | Msa1459910 | 0.816513 | 5.319762e-52 | -8.615850e-47 |
| Msa0785130 | Msa1459910 | 0.811592 | 6.483252e-51 | -8.615850e-47 |
| Msa0788120 | Msa1459910 | 0.832851 | 7.465389e-56 | -8.615850e-47 |
| Msa0790400 | Msa1459910 | 0.809555 | 1.785831e-50 | -8.615850e-47 |
| Msa0799000 | Msa1459910 | 0.821696 | 3.519403e-53 | -8.615850e-47 |
| Msa0804250 | Msa1459910 | 0.810471 | 1.134109e-50 | -8.615850e-47 |
| Msa0818770 | Msa1459910 | 0.815415 | 9.352915e-52 | -8.615850e-47 |
| Msa0819540 | Msa1459910 | 0.824064 | 9.882259e-54 | -8.615850e-47 |
| Msa0825270 | Msa1459910 | 0.833874 | 4.150525e-56 | -8.615850e-47 |
| Msa0826510 | Msa1459910 | 0.994866 | 6.719190e-211 | -8.615850e-47 |
| Msa0836120 | Msa1459910 | 0.821504 | 3.898891e-53 | -8.615850e-47 |
| Msa0127040 | Msa1459910 | 0.826915 | 2.086857e-54 | -8.615850e-47 |
| Msa0127530 | Msa1459910 | 0.811968 | 5.368307e-51 | -8.615850e-47 |
| Msa0127850 | Msa1459910 | 0.817341 | 3.467726e-52 | -8.615850e-47 |
| Msa0130110 | Msa1459910 | 0.808108 | 3.641813e-50 | -8.615850e-47 |
| Msa0131700 | Msa1459910 | 0.800337 | 1.511085e-48 | -8.615850e-47 |
| Msa0133820 | Msa1459910 | 0.802528 | 5.375815e-49 | -8.615850e-47 |
| Msa0138360 | Msa1459910 | 0.811065 | 8.434473e-51 | -8.615850e-47 |
| Msa0142110 | Msa1459910 | 0.840463 | 8.563574e-58 | -8.615850e-47 |
| Msa0142410 | Msa1459910 | 0.823467 | 1.363672e-53 | -8.615850e-47 |
| Msa0147980 | Msa1459910 | 0.811512 | 6.745865e-51 | -8.615850e-47 |
| Msa0167400 | Msa1459910 | 0.818065 | 2.380565e-52 | -8.615850e-47 |
| Msa0167480 | Msa1459910 | 0.802068 | 6.686920e-49 | -8.615850e-47 |
| Msa0168090 | Msa1459910 | 0.822456 | 2.346586e-53 | -8.615850e-47 |
| Msa0168940 | Msa1459910 | 0.809191 | 2.137617e-50 | -8.615850e-47 |
| Msa0171850 | Msa1459910 | 0.814493 | 1.497816e-51 | -8.615850e-47 |
| Msa0174000 | Msa1459910 | 0.831328 | 1.776106e-55 | -8.615850e-47 |
| Msa0178120 | Msa1459910 | 0.809488 | 1.845754e-50 | -8.615850e-47 |
| Msa0188690 | Msa1459910 | 0.822085 | 2.860013e-53 | -8.615850e-47 |
| Msa0209140 | Msa1459910 | 0.802776 | 4.778591e-49 | -8.615850e-47 |
| Msa0223170 | Msa1459910 | 0.850907 | 1.253487e-60 | -8.615850e-47 |
| Msa0229920 | Msa1459910 | 0.828769 | 7.476802e-55 | -8.615850e-47 |
| Msa1228970 | Msa1459910 | 0.826111 | 3.246062e-54 | -8.615850e-47 |
| Msa1235530 | Msa1459910 | 0.808967 | 2.387499e-50 | -8.615850e-47 |
| Msa1254620 | Msa1459910 | 0.819901 | 9.102510e-53 | -8.615850e-47 |
| Msa1259640 | Msa1459910 | 0.804265 | 2.346771e-49 | -8.615850e-47 |
| Msa1263820 | Msa1459910 | 0.821530 | 3.844960e-53 | -8.615850e-47 |
| Msa1271580 | Msa1459910 | 0.810165 | 1.320332e-50 | -8.615850e-47 |
| Msa1293070 | Msa1459910 | 0.800277 | 1.554515e-48 | -8.615850e-47 |
| Msa1294840 | Msa1459910 | 0.800827 | 1.200609e-48 | -8.615850e-47 |
| Msa1329300 | Msa1459910 | 0.801461 | 8.908786e-49 | -8.615850e-47 |
| Msa1329450 | Msa1459910 | 0.809908 | 1.499488e-50 | -8.615850e-47 |
| Msa1329790 | Msa1459910 | 0.815061 | 1.120960e-51 | -8.615850e-47 |
| Msa1333560 | Msa1459910 | 0.821464 | 3.981188e-53 | -8.615850e-47 |
| Msa1333970 | Msa1459910 | 0.810707 | 1.008065e-50 | -8.615850e-47 |
| Msa1344310 | Msa1459910 | 0.842204 | 2.982820e-58 | -8.615850e-47 |
| Msa0372490 | Msa1459910 | 0.805788 | 1.127192e-49 | -8.615850e-47 |
| Msa0376280 | Msa1459910 | 0.801585 | 8.399865e-49 | -8.615850e-47 |
| Msa0383130 | Msa1459910 | 0.823454 | 1.372950e-53 | -8.615850e-47 |
| Msa0384670 | Msa1459910 | 0.828671 | 7.897169e-55 | -8.615850e-47 |
| Msa0430230 | Msa1459910 | 0.820059 | 8.378076e-53 | -8.615850e-47 |
| Msa0431410 | Msa1459910 | 0.826609 | 2.469934e-54 | -8.615850e-47 |
| Msa0432070 | Msa1459910 | 0.811594 | 6.475083e-51 | -8.615850e-47 |
| Msa0434420 | Msa1459910 | 0.842763 | 2.119799e-58 | -8.615850e-47 |
| Msa0434570 | Msa1459910 | 0.831065 | 2.061381e-55 | -8.615850e-47 |
| Msa0434770 | Msa1459910 | 0.839138 | 1.895143e-57 | -8.615850e-47 |
| Msa0435370 | Msa1459910 | 0.830283 | 3.204146e-55 | -8.615850e-47 |
| Msa0436200 | Msa1459910 | 0.853866 | 1.799450e-61 | -8.615850e-47 |
| Msa0468490 | Msa1459910 | 0.805966 | 1.034361e-49 | -8.615850e-47 |
| Msa0478580 | Msa1459910 | 0.832446 | 9.410452e-56 | -8.615850e-47 |
| Msa1027250 | Msa1459910 | 0.807507 | 4.886783e-50 | -8.615850e-47 |
| Msa1027360 | Msa1459910 | 0.818229 | 2.185972e-52 | -8.615850e-47 |
| Msa1031390 | Msa1459910 | 0.849380 | 3.355589e-60 | -8.615850e-47 |
| Msa1070390 | Msa1459910 | 0.829293 | 5.581662e-55 | -8.615850e-47 |
| Msa1072600 | Msa1459910 | 0.814651 | 1.382343e-51 | -8.615850e-47 |
| Msa1076560 | Msa1459910 | 0.816821 | 4.538751e-52 | -8.615850e-47 |
| Msa1078000 | Msa1459910 | 0.811048 | 8.504678e-51 | -8.615850e-47 |
| Msa1083880 | Msa1459910 | 0.807567 | 4.746854e-50 | -8.615850e-47 |
| Msa1095790 | Msa1459910 | 0.855746 | 5.131181e-62 | -8.615850e-47 |
| Msa0241830 | Msa1459910 | 0.854574 | 1.124040e-61 | -8.615850e-47 |
| Msa0244970 | Msa1459910 | 0.815547 | 8.740120e-52 | -8.615850e-47 |
| Msa0245580 | Msa1459910 | 0.811556 | 6.598698e-51 | -8.615850e-47 |
| Msa0248460 | Msa1459910 | 0.800059 | 1.721523e-48 | -8.615850e-47 |
| Msa0262480 | Msa1459910 | 0.846723 | 1.815859e-59 | -8.615850e-47 |
| Msa0270210 | Msa1459910 | 0.866523 | 2.679859e-65 | -8.615850e-47 |
| Msa0296250 | Msa1459910 | 0.841249 | 5.327587e-58 | -8.615850e-47 |
| Msa0300350 | Msa1459910 | 0.843190 | 1.631737e-58 | -8.615850e-47 |
| Msa0301520 | Msa1459910 | 0.840627 | 7.758982e-58 | -8.615850e-47 |
| Msa0307570 | Msa1459910 | 0.825944 | 3.555229e-54 | -8.615850e-47 |
| Msa0307850 | Msa1459910 | 0.807085 | 6.004028e-50 | -8.615850e-47 |
| Msa0307860 | Msa1459910 | 0.803833 | 2.886112e-49 | -8.615850e-47 |
| Msa0322900 | Msa1459910 | 0.845538 | 3.816291e-59 | -8.615850e-47 |
| Msa0332640 | Msa1459910 | 0.808234 | 3.423638e-50 | -8.615850e-47 |
| Msa0339690 | Msa1459910 | 0.817410 | 3.345415e-52 | -8.615850e-47 |
| Msa0363060 | Msa1459910 | 0.830757 | 2.453852e-55 | -8.615850e-47 |
| Msa0363810 | Msa1459910 | 0.823371 | 1.435770e-53 | -8.615850e-47 |
| Msa1123350 | Msa1459910 | 0.837740 | 4.347818e-57 | -8.615850e-47 |
| Msa1127540 | Msa1459910 | 0.870014 | 2.009343e-66 | -8.615850e-47 |
| Msa1127590 | Msa1459910 | 0.820297 | 7.389582e-53 | -8.615850e-47 |
| Msa1133540 | Msa1459910 | 0.816491 | 5.381430e-52 | -8.615850e-47 |
| Msa1162080 | Msa1459910 | 0.819884 | 9.187405e-53 | -8.615850e-47 |
| Msa1169720 | Msa1459910 | 0.802107 | 6.564435e-49 | -8.615850e-47 |
| Msa1188560 | Msa1459910 | 0.819191 | 1.322004e-52 | -8.615850e-47 |
| Msa1201640 | Msa1459910 | 0.824769 | 6.744430e-54 | -8.615850e-47 |
| Msa1201810 | Msa1459910 | 0.819042 | 1.429736e-52 | -8.615850e-47 |
| Msa1201830 | Msa1459910 | 0.824231 | 9.026410e-54 | -8.615850e-47 |
| Msa1202580 | Msa1459910 | 0.803471 | 3.430904e-49 | -8.615850e-47 |
| Msa1205480 | Msa1459910 | 0.811371 | 7.238937e-51 | -8.615850e-47 |
| Msa1205850 | Msa1459910 | 0.802273 | 6.067227e-49 | -8.615850e-47 |
| Msa1211340 | Msa1459910 | 0.807885 | 4.062167e-50 | -8.615850e-47 |
| Msa1223330 | Msa1459910 | 0.803230 | 3.849500e-49 | -8.615850e-47 |
| Msa0510290 | Msa1459910 | 0.800181 | 1.625814e-48 | -8.615850e-47 |
| Msa0511150 | Msa1459910 | 0.855764 | 5.066403e-62 | -8.615850e-47 |
| Msa0512850 | Msa1459910 | 0.808578 | 2.891620e-50 | -8.615850e-47 |
| Msa0516120 | Msa1459910 | 0.821972 | 3.038922e-53 | -8.615850e-47 |
| Msa0518030 | Msa1459910 | 0.842735 | 2.156047e-58 | -8.615850e-47 |
| Msa0518960 | Msa1459910 | 0.830966 | 2.180471e-55 | -8.615850e-47 |
| Msa0519150 | Msa1459910 | 0.841078 | 5.909499e-58 | -8.615850e-47 |
| Msa0524590 | Msa1459910 | 0.838374 | 2.987288e-57 | -8.615850e-47 |
| Msa0531250 | Msa1459910 | 0.812357 | 4.415161e-51 | -8.615850e-47 |
| Msa0547680 | Msa1459910 | 0.802073 | 6.670989e-49 | -8.615850e-47 |
| Msa0547990 | Msa1459910 | 0.835180 | 1.949726e-56 | -8.615850e-47 |
| Msa0549790 | Msa1459910 | 0.826223 | 3.052764e-54 | -8.615850e-47 |
| Msa0550570 | Msa1459910 | 0.804565 | 2.032720e-49 | -8.615850e-47 |
| Msa0573010 | Msa1459910 | 0.801516 | 8.679071e-49 | -8.615850e-47 |
| Msa0581690 | Msa1459910 | 0.836175 | 1.091607e-56 | -8.615850e-47 |
| Msa0583500 | Msa1459910 | 0.843321 | 1.505628e-58 | -8.615850e-47 |
| Msa0593700 | Msa1459910 | 0.845067 | 5.117875e-59 | -8.615850e-47 |
| Msa0597770 | Msa1459910 | 0.833622 | 4.798176e-56 | -8.615850e-47 |
| Msa0599900 | Msa1459910 | 0.819948 | 8.881858e-53 | -8.615850e-47 |
| Msa0862650 | Msa1459910 | 0.833577 | 4.923330e-56 | -8.615850e-47 |
| Msa0864420 | Msa1459910 | 0.814576 | 1.435706e-51 | -8.615850e-47 |
| Msa0865620 | Msa1459910 | 0.996877 | 1.641393e-233 | -8.615850e-47 |
| Msa0869010 | Msa1459910 | 0.806717 | 7.181620e-50 | -8.615850e-47 |
| Msa0870650 | Msa1459910 | 0.802571 | 5.267067e-49 | -8.615850e-47 |
| Msa0879850 | Msa1459910 | 0.828385 | 9.258066e-55 | -8.615850e-47 |
| Msa0888940 | Msa1459910 | 0.819715 | 1.004060e-52 | -8.615850e-47 |
| Msa0940420 | Msa1459910 | 0.803419 | 3.517859e-49 | -8.615850e-47 |
| Msa0963020 | Msa1459910 | 0.837637 | 4.622430e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1459910 | MtrunA17_Chr5g0447761 | 98.109 | 476 | 8 | 1 | 1 | 475 | 1 | 476 | 0.0 | 919 |
| Msa1459910 | MtrunA17_Chr3g0101061 | 63.825 | 481 | 165 | 7 | 1 | 475 | 35 | 512 | 0.0 | 583 |
| Msa1459910 | MtrunA17_Chr2g0290191 | 58.038 | 479 | 192 | 7 | 4 | 475 | 2 | 478 | 1.04e-176 | 505 |
| Msa1459910 | MtrunA17_Chr1g0186351 | 59.487 | 195 | 73 | 1 | 1 | 189 | 1 | 195 | 1.57e-77 | 250 |
| Msa1459910 | MtrunA17_Chr3g0135111 | 50.777 | 193 | 86 | 2 | 1 | 185 | 5 | 196 | 1.10e-55 | 190 |
| Msa1459910 | MtrunA17_Chr6g0449481 | 42.932 | 191 | 92 | 3 | 6 | 193 | 45 | 221 | 2.48e-46 | 165 |
| Msa1459910 | MtrunA17_Chr3g0120721 | 41.989 | 181 | 92 | 3 | 6 | 185 | 18 | 186 | 5.17e-43 | 155 |
| Msa1459910 | MtrunA17_Chr5g0402191 | 37.234 | 188 | 105 | 2 | 4 | 191 | 2 | 176 | 2.28e-35 | 136 |
| Msa1459910 | MtrunA17_Chr5g0402191 | 28.095 | 210 | 117 | 3 | 7 | 183 | 93 | 301 | 6.31e-19 | 88.6 |
| Msa1459910 | MtrunA17_Chr8g0375101 | 36.181 | 199 | 111 | 4 | 4 | 199 | 2 | 187 | 7.43e-34 | 131 |
| Msa1459910 | MtrunA17_Chr8g0375101 | 29.577 | 213 | 111 | 6 | 7 | 183 | 93 | 302 | 1.45e-18 | 87.4 |
| Msa1459910 | MtrunA17_Chr4g0045921 | 30.672 | 238 | 141 | 6 | 7 | 238 | 77 | 296 | 1.62e-20 | 92.8 |
| Msa1459910 | MtrunA17_Chr8g0360551 | 30.508 | 177 | 113 | 3 | 7 | 182 | 74 | 241 | 1.65e-20 | 94.0 |
| Msa1459910 | MtrunA17_Chr4g0058151 | 29.730 | 185 | 107 | 4 | 3 | 178 | 119 | 289 | 2.37e-16 | 79.7 |
| Msa1459910 | MtrunA17_Chr7g0219021 | 49.383 | 81 | 39 | 1 | 5 | 83 | 39 | 119 | 6.16e-16 | 77.8 |
| Msa1459910 | MtrunA17_Chr3g0127751 | 39.759 | 83 | 49 | 1 | 7 | 88 | 27 | 109 | 1.34e-15 | 76.6 |
| Msa1459910 | MtrunA17_Chr8g0346011 | 36.885 | 122 | 71 | 3 | 7 | 125 | 38 | 156 | 1.68e-15 | 77.0 |
| Msa1459910 | MtrunA17_Chr5g0440831 | 25.397 | 189 | 111 | 3 | 7 | 182 | 166 | 337 | 1.83e-15 | 79.0 |
| Msa1459910 | MtrunA17_Chr4g0017401 | 41.333 | 75 | 43 | 1 | 7 | 80 | 17 | 91 | 4.02e-15 | 75.5 |
| Msa1459910 | MtrunA17_Chr4g0061451 | 48.101 | 79 | 39 | 1 | 7 | 83 | 43 | 121 | 6.64e-15 | 74.7 |
| Msa1459910 | MtrunA17_Chr3g0144311 | 41.333 | 75 | 43 | 1 | 7 | 80 | 30 | 104 | 1.13e-14 | 74.3 |
| Msa1459910 | MtrunA17_Chr7g0255011 | 25.926 | 189 | 134 | 4 | 7 | 192 | 128 | 313 | 2.67e-14 | 75.1 |
| Msa1459910 | MtrunA17_Chr3g0116631 | 30.939 | 181 | 117 | 3 | 4 | 181 | 107 | 282 | 4.11e-14 | 72.8 |
| Msa1459910 | MtrunA17_Chr2g0278661 | 37.349 | 83 | 50 | 1 | 3 | 83 | 4 | 86 | 4.99e-14 | 72.0 |
| Msa1459910 | MtrunA17_Chr1g0181111 | 29.474 | 190 | 117 | 6 | 7 | 181 | 85 | 272 | 8.55e-14 | 71.6 |
| Msa1459910 | MtrunA17_Chr5g0426311 | 42.647 | 68 | 38 | 1 | 7 | 73 | 17 | 84 | 1.13e-13 | 71.6 |
| Msa1459910 | MtrunA17_Chr7g0276531 | 46.667 | 60 | 32 | 0 | 7 | 66 | 19 | 78 | 1.45e-13 | 70.9 |
| Msa1459910 | MtrunA17_Chr3g0121631 | 41.250 | 80 | 46 | 1 | 5 | 83 | 35 | 114 | 2.30e-13 | 67.4 |
| Msa1459910 | MtrunA17_Chr3g0086861 | 42.683 | 82 | 43 | 2 | 7 | 84 | 45 | 126 | 2.97e-13 | 71.6 |
| Msa1459910 | MtrunA17_Chr4g0068631 | 26.066 | 211 | 106 | 5 | 6 | 194 | 88 | 270 | 3.40e-13 | 72.0 |
| Msa1459910 | MtrunA17_Chr1g0153871 | 29.885 | 174 | 107 | 5 | 8 | 176 | 192 | 355 | 4.99e-13 | 70.9 |
| Msa1459910 | MtrunA17_Chr1g0210241 | 39.241 | 79 | 46 | 1 | 7 | 83 | 8 | 86 | 1.13e-12 | 68.6 |
| Msa1459910 | MtrunA17_Chr1g0210241 | 35.443 | 79 | 50 | 1 | 107 | 184 | 8 | 86 | 8.82e-12 | 65.9 |
| Msa1459910 | MtrunA17_Chr1g0211191 | 26.087 | 184 | 126 | 5 | 2 | 178 | 66 | 246 | 1.36e-12 | 69.7 |
| Msa1459910 | MtrunA17_Chr4g0035051 | 39.474 | 76 | 44 | 1 | 7 | 80 | 9 | 84 | 1.85e-12 | 64.3 |
| Msa1459910 | MtrunA17_Chr6g0466451 | 26.354 | 277 | 155 | 14 | 13 | 266 | 113 | 363 | 3.33e-12 | 68.6 |
| Msa1459910 | MtrunA17_Chr4g0074711 | 28.177 | 181 | 103 | 7 | 8 | 176 | 169 | 334 | 3.41e-12 | 68.2 |
| Msa1459910 | MtrunA17_Chr3g0119311 | 54.167 | 48 | 22 | 0 | 7 | 54 | 37 | 84 | 3.81e-12 | 63.9 |
| Msa1459910 | MtrunA17_Chr6g0465631 | 26.354 | 277 | 155 | 14 | 13 | 266 | 113 | 363 | 4.11e-12 | 68.6 |
| Msa1459910 | MtrunA17_Chr4g0035031 | 36.842 | 76 | 46 | 1 | 7 | 80 | 9 | 84 | 4.29e-12 | 65.1 |
| Msa1459910 | MtrunA17_Chr3g0110211 | 32.075 | 159 | 90 | 4 | 9 | 164 | 28 | 171 | 5.10e-12 | 67.4 |
| Msa1459910 | MtrunA17_Chr4g0045221 | 28.788 | 198 | 115 | 7 | 8 | 192 | 118 | 302 | 5.87e-12 | 67.8 |
| Msa1459910 | MtrunA17_Chr4g0050781 | 30.952 | 84 | 56 | 1 | 2 | 83 | 3 | 86 | 6.30e-12 | 65.1 |
| Msa1459910 | MtrunA17_Chr1g0168601 | 30.769 | 169 | 95 | 6 | 18 | 181 | 78 | 229 | 1.93e-11 | 63.9 |
| Msa1459910 | MtrunA17_Chr7g0276201 | 27.632 | 152 | 84 | 5 | 7 | 154 | 105 | 234 | 2.08e-11 | 65.9 |
| Msa1459910 | MtrunA17_Chr7g0219031 | 44.615 | 65 | 36 | 0 | 5 | 69 | 39 | 103 | 2.49e-11 | 60.8 |
| Msa1459910 | MtrunA17_Chr4g0035001 | 38.158 | 76 | 45 | 1 | 7 | 80 | 7 | 82 | 5.01e-11 | 61.2 |
| Msa1459910 | MtrunA17_Chr2g0327921 | 36.905 | 84 | 44 | 2 | 107 | 185 | 8 | 87 | 6.93e-11 | 58.9 |
| Msa1459910 | MtrunA17_Chr1g0201151 | 23.891 | 293 | 153 | 14 | 8 | 266 | 211 | 467 | 9.03e-11 | 64.3 |
| Msa1459910 | MtrunA17_Chr2g0328791 | 27.807 | 187 | 116 | 6 | 8 | 187 | 17 | 191 | 9.34e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1459910 | AT3G07810.2 | 64.185 | 497 | 152 | 12 | 1 | 476 | 1 | 492 | 0.0 | 550 |
| Msa1459910 | AT3G07810.1 | 64.315 | 496 | 151 | 12 | 1 | 475 | 1 | 491 | 0.0 | 550 |
| Msa1459910 | AT5G47620.1 | 47.917 | 480 | 193 | 9 | 1 | 475 | 1 | 428 | 1.95e-133 | 393 |
| Msa1459910 | AT5G47620.2 | 47.917 | 480 | 193 | 9 | 1 | 475 | 1 | 428 | 1.95e-133 | 393 |
| Msa1459910 | AT5G47620.5 | 47.917 | 480 | 193 | 9 | 1 | 475 | 1 | 428 | 1.95e-133 | 393 |
| Msa1459910 | AT4G26650.2 | 51.807 | 498 | 158 | 20 | 3 | 475 | 9 | 449 | 3.75e-132 | 390 |
| Msa1459910 | AT4G26650.1 | 51.807 | 498 | 158 | 20 | 3 | 475 | 12 | 452 | 5.31e-132 | 390 |
| Msa1459910 | AT5G47620.4 | 45.817 | 502 | 193 | 10 | 1 | 475 | 1 | 450 | 1.93e-128 | 381 |
| Msa1459910 | AT5G55550.2 | 48.819 | 508 | 188 | 21 | 1 | 487 | 1 | 457 | 1.96e-120 | 361 |
| Msa1459910 | AT5G55550.3 | 48.819 | 508 | 188 | 21 | 1 | 487 | 1 | 457 | 1.96e-120 | 361 |
| Msa1459910 | AT5G55550.6 | 48.819 | 508 | 188 | 21 | 1 | 487 | 1 | 457 | 1.96e-120 | 361 |
| Msa1459910 | AT5G55550.11 | 48.819 | 508 | 188 | 21 | 1 | 487 | 1 | 457 | 1.96e-120 | 361 |
| Msa1459910 | AT5G55550.5 | 49.597 | 496 | 178 | 21 | 1 | 475 | 1 | 445 | 1.62e-119 | 358 |
| Msa1459910 | AT5G55550.4 | 49.597 | 496 | 178 | 21 | 1 | 475 | 1 | 445 | 1.62e-119 | 358 |
| Msa1459910 | AT5G55550.9 | 49.597 | 496 | 178 | 21 | 1 | 475 | 1 | 445 | 1.62e-119 | 358 |
| Msa1459910 | AT5G55550.7 | 49.597 | 496 | 178 | 21 | 1 | 475 | 1 | 445 | 1.62e-119 | 358 |
| Msa1459910 | AT5G55550.1 | 49.597 | 496 | 178 | 21 | 1 | 475 | 1 | 445 | 1.62e-119 | 358 |
| Msa1459910 | AT5G55550.10 | 44.685 | 555 | 188 | 22 | 1 | 487 | 1 | 504 | 6.29e-112 | 340 |
| Msa1459910 | AT5G55550.8 | 45.304 | 543 | 178 | 22 | 1 | 475 | 1 | 492 | 4.27e-111 | 338 |
| Msa1459910 | AT5G47620.3 | 43.980 | 407 | 171 | 9 | 74 | 475 | 14 | 368 | 4.24e-92 | 285 |
| Msa1459910 | AT5G47620.3 | 39.759 | 83 | 49 | 1 | 3 | 84 | 43 | 125 | 2.51e-15 | 78.2 |
| Msa1459910 | AT4G14300.1 | 56.995 | 193 | 77 | 2 | 1 | 188 | 1 | 192 | 1.83e-75 | 243 |
| Msa1459910 | AT4G14300.2 | 56.995 | 193 | 77 | 2 | 1 | 188 | 1 | 192 | 1.83e-75 | 243 |
| Msa1459910 | AT2G33410.1 | 55.959 | 193 | 79 | 2 | 1 | 188 | 1 | 192 | 4.22e-71 | 232 |
| Msa1459910 | AT1G58470.2 | 47.236 | 199 | 91 | 2 | 1 | 185 | 1 | 199 | 6.25e-52 | 180 |
| Msa1459910 | AT1G58470.1 | 47.236 | 199 | 91 | 2 | 1 | 185 | 1 | 199 | 6.25e-52 | 180 |
| Msa1459910 | AT1G17640.2 | 47.222 | 180 | 85 | 2 | 6 | 184 | 66 | 236 | 3.68e-48 | 170 |
| Msa1459910 | AT1G17640.1 | 47.222 | 180 | 85 | 2 | 6 | 184 | 66 | 236 | 3.68e-48 | 170 |
| Msa1459910 | AT1G17640.3 | 47.222 | 180 | 85 | 2 | 6 | 184 | 66 | 236 | 3.68e-48 | 170 |
| Msa1459910 | AT3G13224.2 | 42.541 | 181 | 93 | 2 | 6 | 185 | 19 | 189 | 3.39e-45 | 162 |
| Msa1459910 | AT3G13224.3 | 42.222 | 180 | 93 | 2 | 7 | 185 | 11 | 180 | 4.78e-44 | 159 |
| Msa1459910 | AT3G13224.3 | 51.250 | 80 | 38 | 1 | 105 | 184 | 9 | 87 | 6.36e-19 | 88.6 |
| Msa1459910 | AT5G40490.1 | 43.350 | 203 | 98 | 5 | 5 | 206 | 41 | 227 | 7.76e-44 | 160 |
| Msa1459910 | AT3G13224.1 | 44.099 | 161 | 80 | 1 | 6 | 166 | 19 | 169 | 4.12e-41 | 147 |
| Msa1459910 | AT3G13224.1 | 49.425 | 87 | 38 | 2 | 98 | 184 | 16 | 96 | 8.93e-18 | 82.8 |
| Msa1459910 | AT5G40490.2 | 44.565 | 184 | 85 | 5 | 24 | 206 | 43 | 210 | 9.81e-39 | 145 |
| Msa1459910 | AT5G40490.2 | 36.275 | 102 | 62 | 2 | 85 | 184 | 2 | 102 | 3.04e-13 | 72.0 |
| Msa1459910 | AT5G40490.2 | 38.372 | 86 | 51 | 1 | 5 | 88 | 112 | 197 | 1.20e-11 | 67.0 |
| Msa1459910 | AT4G36960.1 | 35.263 | 190 | 110 | 2 | 7 | 196 | 4 | 180 | 4.13e-36 | 138 |
| Msa1459910 | AT4G36960.2 | 35.263 | 190 | 110 | 2 | 7 | 196 | 4 | 180 | 4.13e-36 | 138 |
| Msa1459910 | AT2G41060.1 | 24.437 | 311 | 173 | 9 | 7 | 271 | 129 | 423 | 2.20e-19 | 90.9 |
| Msa1459910 | AT2G41060.3 | 24.437 | 311 | 173 | 9 | 7 | 271 | 129 | 423 | 2.20e-19 | 90.9 |
| Msa1459910 | AT2G41060.2 | 24.437 | 311 | 173 | 9 | 7 | 271 | 129 | 423 | 2.20e-19 | 90.9 |
| Msa1459910 | AT1G33470.3 | 34.615 | 156 | 80 | 6 | 7 | 157 | 8 | 146 | 2.02e-17 | 82.0 |
| Msa1459910 | AT1G33470.1 | 34.615 | 156 | 80 | 6 | 7 | 157 | 8 | 146 | 2.03e-17 | 82.4 |
| Msa1459910 | AT1G33470.2 | 34.615 | 156 | 80 | 6 | 7 | 157 | 8 | 146 | 2.21e-17 | 82.0 |
| Msa1459910 | AT3G15010.1 | 28.571 | 182 | 110 | 3 | 7 | 182 | 76 | 243 | 2.43e-17 | 84.3 |
| Msa1459910 | AT3G15010.2 | 28.571 | 182 | 110 | 3 | 7 | 182 | 76 | 243 | 2.43e-17 | 84.3 |
| Msa1459910 | AT4G16280.2 | 30.542 | 203 | 111 | 6 | 2 | 192 | 116 | 300 | 3.26e-17 | 85.1 |
| Msa1459910 | AT4G16280.4 | 30.542 | 203 | 111 | 6 | 2 | 192 | 41 | 225 | 3.40e-17 | 85.1 |
| Msa1459910 | AT4G16280.3 | 30.542 | 203 | 111 | 6 | 2 | 192 | 116 | 300 | 4.13e-17 | 84.3 |
| Msa1459910 | AT4G24770.1 | 29.412 | 204 | 115 | 7 | 3 | 198 | 147 | 329 | 5.34e-16 | 79.7 |
| Msa1459910 | AT4G24770.2 | 29.412 | 204 | 115 | 7 | 3 | 198 | 147 | 329 | 5.34e-16 | 79.7 |
| Msa1459910 | AT1G76460.1 | 44.000 | 75 | 41 | 1 | 7 | 80 | 25 | 99 | 1.20e-15 | 77.8 |
| Msa1459910 | AT1G71770.1 | 28.525 | 305 | 154 | 16 | 8 | 268 | 241 | 525 | 1.22e-15 | 80.1 |
| Msa1459910 | AT1G71770.2 | 28.525 | 305 | 154 | 16 | 8 | 268 | 241 | 525 | 1.22e-15 | 80.1 |
| Msa1459910 | AT3G56860.9 | 24.599 | 187 | 124 | 3 | 7 | 182 | 141 | 321 | 2.08e-15 | 79.0 |
| Msa1459910 | AT3G56860.11 | 24.599 | 187 | 124 | 3 | 7 | 182 | 141 | 321 | 2.08e-15 | 79.0 |
| Msa1459910 | AT3G56860.8 | 24.599 | 187 | 124 | 3 | 7 | 182 | 141 | 321 | 2.08e-15 | 79.0 |
| Msa1459910 | AT3G56860.5 | 24.599 | 187 | 124 | 3 | 7 | 182 | 141 | 321 | 2.08e-15 | 79.0 |
| Msa1459910 | AT3G56860.7 | 24.599 | 187 | 124 | 3 | 7 | 182 | 141 | 321 | 2.08e-15 | 79.0 |
| Msa1459910 | AT3G56860.2 | 24.599 | 187 | 124 | 3 | 7 | 182 | 141 | 321 | 2.08e-15 | 79.0 |
| Msa1459910 | AT3G56860.6 | 24.599 | 187 | 124 | 3 | 7 | 182 | 141 | 321 | 2.08e-15 | 79.0 |
| Msa1459910 | AT3G56860.10 | 24.599 | 187 | 124 | 3 | 7 | 182 | 141 | 321 | 2.08e-15 | 79.0 |
| Msa1459910 | AT3G56860.3 | 24.599 | 187 | 124 | 3 | 7 | 182 | 141 | 321 | 2.08e-15 | 79.0 |
| Msa1459910 | AT3G56860.1 | 24.599 | 187 | 124 | 3 | 7 | 182 | 141 | 321 | 2.08e-15 | 79.0 |
| Msa1459910 | AT3G56860.4 | 24.599 | 187 | 124 | 3 | 7 | 182 | 141 | 321 | 2.08e-15 | 79.0 |
| Msa1459910 | AT1G20880.2 | 44.000 | 75 | 41 | 1 | 7 | 80 | 25 | 99 | 2.35e-15 | 76.6 |
| Msa1459910 | AT1G20880.3 | 44.000 | 75 | 41 | 1 | 7 | 80 | 25 | 99 | 2.35e-15 | 76.6 |
| Msa1459910 | AT1G20880.1 | 44.000 | 75 | 41 | 1 | 7 | 80 | 25 | 99 | 2.35e-15 | 76.6 |
| Msa1459910 | AT3G52380.1 | 32.161 | 199 | 124 | 7 | 4 | 196 | 114 | 307 | 2.54e-15 | 77.4 |
| Msa1459910 | AT3G23830.2 | 41.975 | 81 | 45 | 1 | 5 | 83 | 34 | 114 | 2.56e-15 | 73.2 |
| Msa1459910 | AT3G23830.2 | 34.940 | 83 | 53 | 1 | 107 | 188 | 36 | 118 | 2.93e-11 | 61.6 |
| Msa1459910 | AT3G23830.1 | 41.975 | 81 | 45 | 1 | 5 | 83 | 34 | 114 | 2.56e-15 | 73.2 |
| Msa1459910 | AT3G23830.1 | 34.940 | 83 | 53 | 1 | 107 | 188 | 36 | 118 | 2.93e-11 | 61.6 |
| Msa1459910 | AT2G37220.1 | 28.421 | 190 | 120 | 5 | 7 | 181 | 92 | 280 | 1.96e-14 | 74.3 |
| Msa1459910 | AT4G00830.2 | 28.649 | 185 | 103 | 6 | 7 | 184 | 117 | 279 | 1.97e-14 | 75.9 |
| Msa1459910 | AT4G00830.1 | 28.649 | 185 | 103 | 6 | 7 | 184 | 117 | 279 | 1.97e-14 | 75.9 |
| Msa1459910 | AT4G00830.6 | 28.649 | 185 | 103 | 6 | 7 | 184 | 117 | 279 | 1.97e-14 | 75.9 |
| Msa1459910 | AT4G39260.3 | 39.241 | 79 | 46 | 1 | 7 | 83 | 7 | 85 | 4.91e-14 | 68.2 |
| Msa1459910 | AT4G39260.3 | 35.443 | 79 | 50 | 1 | 107 | 184 | 7 | 85 | 5.76e-11 | 59.3 |
| Msa1459910 | AT5G61030.2 | 43.210 | 81 | 44 | 1 | 5 | 83 | 39 | 119 | 8.61e-14 | 72.8 |
| Msa1459910 | AT5G61030.1 | 43.210 | 81 | 44 | 1 | 5 | 83 | 39 | 119 | 8.61e-14 | 72.8 |
| Msa1459910 | AT1G22330.1 | 41.333 | 75 | 43 | 1 | 7 | 80 | 18 | 92 | 1.32e-13 | 72.0 |
| Msa1459910 | AT4G13850.4 | 43.210 | 81 | 44 | 1 | 5 | 83 | 34 | 114 | 1.45e-13 | 68.2 |
| Msa1459910 | AT2G46780.1 | 39.474 | 76 | 45 | 1 | 7 | 81 | 23 | 98 | 1.49e-13 | 72.4 |
| Msa1459910 | AT2G46780.1 | 35.106 | 94 | 61 | 0 | 104 | 197 | 20 | 113 | 3.16e-11 | 65.1 |
| Msa1459910 | AT2G46780.2 | 39.474 | 76 | 45 | 1 | 7 | 81 | 23 | 98 | 1.49e-13 | 72.4 |
| Msa1459910 | AT2G46780.2 | 35.106 | 94 | 61 | 0 | 104 | 197 | 20 | 113 | 3.16e-11 | 65.1 |
| Msa1459910 | AT4G13850.3 | 43.210 | 81 | 44 | 1 | 5 | 83 | 34 | 114 | 2.12e-13 | 68.2 |
| Msa1459910 | AT5G04280.1 | 39.241 | 79 | 47 | 1 | 107 | 184 | 8 | 86 | 2.60e-13 | 71.2 |
| Msa1459910 | AT5G04280.1 | 36.082 | 97 | 55 | 2 | 7 | 101 | 8 | 99 | 1.92e-12 | 68.6 |
| Msa1459910 | AT4G13850.2 | 43.210 | 81 | 44 | 1 | 5 | 83 | 34 | 114 | 2.61e-13 | 68.2 |
| Msa1459910 | AT4G13850.1 | 43.210 | 81 | 44 | 1 | 5 | 83 | 34 | 114 | 2.92e-13 | 68.2 |
| Msa1459910 | AT4G00830.3 | 29.508 | 183 | 96 | 5 | 7 | 184 | 117 | 271 | 3.47e-13 | 72.0 |
| Msa1459910 | AT4G00830.5 | 29.508 | 183 | 96 | 5 | 7 | 184 | 117 | 271 | 3.47e-13 | 72.0 |
| Msa1459910 | AT1G22910.1 | 37.333 | 75 | 46 | 1 | 7 | 80 | 14 | 88 | 3.70e-13 | 69.7 |
| Msa1459910 | AT1G22910.2 | 37.333 | 75 | 46 | 1 | 7 | 80 | 14 | 88 | 3.74e-13 | 69.7 |
| Msa1459910 | AT3G52150.2 | 29.775 | 178 | 108 | 5 | 7 | 177 | 77 | 244 | 4.63e-13 | 69.7 |
| Msa1459910 | AT3G52150.1 | 29.775 | 178 | 108 | 5 | 7 | 177 | 77 | 244 | 4.63e-13 | 69.7 |
| Msa1459910 | AT4G39260.2 | 39.474 | 76 | 44 | 1 | 7 | 80 | 7 | 82 | 9.45e-13 | 65.5 |
| Msa1459910 | AT1G78260.1 | 40.000 | 75 | 44 | 1 | 7 | 80 | 18 | 92 | 9.75e-13 | 69.3 |
| Msa1459910 | AT1G60650.2 | 43.750 | 80 | 42 | 2 | 107 | 184 | 13 | 91 | 1.15e-12 | 68.9 |
| Msa1459910 | AT1G60650.2 | 39.241 | 79 | 46 | 1 | 7 | 83 | 13 | 91 | 2.07e-12 | 68.2 |
| Msa1459910 | AT1G60650.1 | 43.750 | 80 | 42 | 2 | 107 | 184 | 13 | 91 | 1.15e-12 | 68.9 |
| Msa1459910 | AT1G60650.1 | 39.241 | 79 | 46 | 1 | 7 | 83 | 13 | 91 | 2.07e-12 | 68.2 |
| Msa1459910 | AT1G78260.2 | 40.000 | 75 | 44 | 1 | 7 | 80 | 18 | 92 | 1.34e-12 | 68.6 |
| Msa1459910 | AT4G27000.1 | 29.762 | 168 | 95 | 7 | 8 | 164 | 175 | 330 | 1.87e-12 | 69.3 |
| Msa1459910 | AT1G74230.1 | 45.570 | 79 | 42 | 1 | 5 | 82 | 33 | 111 | 2.03e-12 | 68.2 |
| Msa1459910 | AT5G50250.1 | 28.191 | 188 | 110 | 5 | 4 | 181 | 111 | 283 | 2.03e-12 | 68.2 |
| Msa1459910 | AT2G36660.1 | 30.688 | 189 | 112 | 8 | 8 | 185 | 203 | 383 | 2.03e-12 | 70.1 |
| Msa1459910 | AT1G22910.3 | 37.333 | 75 | 46 | 1 | 7 | 80 | 14 | 88 | 2.13e-12 | 68.9 |
| Msa1459910 | AT3G54770.3 | 38.667 | 75 | 45 | 1 | 7 | 80 | 18 | 92 | 2.42e-12 | 67.4 |
| Msa1459910 | AT3G26420.1 | 38.462 | 78 | 46 | 1 | 7 | 82 | 8 | 85 | 2.67e-12 | 67.0 |
| Msa1459910 | AT1G47490.1 | 30.055 | 183 | 97 | 6 | 8 | 176 | 199 | 364 | 2.78e-12 | 68.9 |
| Msa1459910 | AT3G54770.1 | 38.667 | 75 | 45 | 1 | 7 | 80 | 18 | 92 | 4.01e-12 | 67.0 |
| Msa1459910 | AT4G39260.1 | 39.474 | 76 | 44 | 1 | 7 | 80 | 7 | 82 | 4.54e-12 | 64.7 |
| Msa1459910 | AT1G47500.1 | 30.682 | 176 | 105 | 5 | 8 | 176 | 201 | 366 | 5.21e-12 | 68.2 |
| Msa1459910 | AT1G34140.1 | 28.108 | 185 | 116 | 7 | 2 | 176 | 111 | 288 | 8.73e-12 | 67.4 |
| Msa1459910 | AT5G54900.1 | 25.126 | 199 | 125 | 6 | 3 | 195 | 57 | 237 | 1.11e-11 | 67.0 |
| Msa1459910 | AT5G54900.1 | 31.737 | 167 | 94 | 7 | 8 | 164 | 156 | 312 | 2.70e-11 | 65.9 |
| Msa1459910 | AT4G39260.4 | 43.333 | 60 | 34 | 0 | 7 | 66 | 7 | 66 | 2.06e-11 | 61.2 |
| Msa1459910 | AT3G14100.1 | 28.324 | 173 | 95 | 6 | 8 | 157 | 146 | 312 | 2.26e-11 | 66.2 |
| Msa1459910 | AT2G23350.1 | 28.977 | 176 | 109 | 6 | 8 | 176 | 227 | 393 | 2.65e-11 | 66.6 |
| Msa1459910 | AT3G08000.1 | 46.269 | 67 | 33 | 1 | 7 | 73 | 42 | 105 | 3.30e-11 | 61.6 |
| Msa1459910 | AT3G16380.1 | 27.160 | 162 | 113 | 4 | 4 | 162 | 200 | 359 | 3.72e-11 | 65.9 |
| Msa1459910 | AT3G19130.1 | 28.272 | 191 | 113 | 7 | 4 | 184 | 106 | 282 | 6.26e-11 | 64.7 |
| Msa1459910 | AT1G18630.1 | 40.845 | 71 | 40 | 1 | 7 | 75 | 37 | 107 | 9.32e-11 | 60.8 |
Find 189 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATTCATTGCTTGATTTA+AGG | 0.085127 | tig0040546:+4366 | Msa1459910:five_prime_UTR |
| TGGAGTTCTTCGCCGATTTC+TGG | 0.115608 | tig0040546:+6257 | Msa1459910:CDS |
| TGAGGTTGTCTCACAATTTA+AGG | 0.152125 | tig0040546:+4447 | Msa1459910:five_prime_UTR |
| TTAATAAAAGGCAGCCAAAT+AGG | 0.234985 | tig0040546:+6603 | Msa1459910:CDS |
| CAGAGGGTAGGTTCATTATC+TGG | 0.243965 | tig0040546:-4146 | Msa1459910:intergenic |
| CCTGGTTTGAGTCCTGGTTT+TGG | 0.269369 | tig0040546:+5972 | Msa1459910:CDS |
| CGAAATGCATTTGCACCATT+TGG | 0.270381 | tig0040546:+5918 | Msa1459910:CDS |
| AGGGAGTATTTCAGTACTTA+TGG | 0.286225 | tig0040546:+4834 | Msa1459910:CDS |
| CCAAGTACTGTCAGTGGTTA+TGG | 0.301066 | tig0040546:+5855 | Msa1459910:CDS |
| AAGAAGTACTTTGACCAGTT+TGG | 0.302105 | tig0040546:+5570 | Msa1459910:CDS |
| TCATGAATTGAATGGTAAAA+TGG | 0.314163 | tig0040546:+5707 | Msa1459910:CDS |
| ATGTCGCTCTTACCCCTATT+TGG | 0.317513 | tig0040546:-6617 | Msa1459910:intergenic |
| AGAAGTACTTTGACCAGTTT+GGG | 0.325562 | tig0040546:+5571 | Msa1459910:CDS |
| CGGATTCAGTTAAGGATTAT+CGG | 0.328042 | tig0040546:-4391 | Msa1459910:intergenic |
| GCACCATTTGGATCTGGTTA+TGG | 0.328498 | tig0040546:+5930 | Msa1459910:CDS |
| GGTCCCTTCGGTTACGGACT+TGG | 0.329728 | tig0040546:+6521 | Msa1459910:CDS |
| GATCTTAAGATTTCTTCATC+TGG | 0.331910 | tig0040546:+4196 | Msa1459910:five_prime_UTR |
| ACTGGTAGAGCTCGTGGATT+TGG | 0.332076 | tig0040546:+4894 | Msa1459910:CDS |
| AGAGGAGAGCGGGTAGGTCC+TGG | 0.335119 | tig0040546:-5765 | Msa1459910:intergenic |
| ATAATCTAAAATTAAACAAT+TGG | 0.341433 | tig0040546:+4090 | Msa1459910:five_prime_UTR |
| TAATAAAAGGCAGCCAAATA+GGG | 0.346895 | tig0040546:+6604 | Msa1459910:CDS |
| ACTCAGAGGCCAAGAGGCTT+TGG | 0.352006 | tig0040546:+5630 | Msa1459910:CDS |
| GGAAATGCATTTGGCAATAC+TGG | 0.353181 | tig0040546:+6227 | Msa1459910:CDS |
| TTTCTTGAATGGCTTCAATC+AGG | 0.365914 | tig0040546:+5824 | Msa1459910:CDS |
| TCATCTGGGTCGTCTTCAAT+TGG | 0.368267 | tig0040546:+4211 | Msa1459910:five_prime_UTR |
| CCATAACCACTGACAGTACT+TGG | 0.369122 | tig0040546:-5855 | Msa1459910:intergenic |
| GGTAGGTTCAGTCCGGTTGC+TGG | 0.371671 | tig0040546:+5891 | Msa1459910:CDS |
| TTTGAGCCTGGTTTGAGTCC+TGG | 0.371865 | tig0040546:+5966 | Msa1459910:CDS |
| GGTAGTGGCAATCTTGGATA+TGG | 0.372310 | tig0040546:+6308 | Msa1459910:CDS |
| AGTATAACCACCAACATAAC+CGG | 0.379311 | tig0040546:-6579 | Msa1459910:intergenic |
| CAGTACTTATGGAGAGGTTA+AGG | 0.382272 | tig0040546:+4845 | Msa1459910:CDS |
| AACAGGACTGCCAAACCTAT+TGG | 0.383933 | tig0040546:-6063 | Msa1459910:intergenic |
| GGCAACAATGGTTATGGATT+GGG | 0.383968 | tig0040546:+6335 | Msa1459910:CDS |
| CAAATGGTGCAAATGCATTT+CGG | 0.395585 | tig0040546:-5917 | Msa1459910:intergenic |
| GATATTGTCGGATTCAGTTA+AGG | 0.405649 | tig0040546:-4399 | Msa1459910:intergenic |
| GGAGGTGGCAACAATGGTTA+TGG | 0.407795 | tig0040546:+6329 | Msa1459910:CDS |
| GTGGTTATACTGTTAATAAA+AGG | 0.411458 | tig0040546:+6591 | Msa1459910:CDS |
| ACTTCATCAGCGGCTCCAAT+AGG | 0.418956 | tig0040546:+6048 | Msa1459910:CDS |
| TGTCAGTGGTTATGGACTTC+GGG | 0.420303 | tig0040546:+5863 | Msa1459910:CDS |
| TCACAGGGTAGTGGCAATCT+TGG | 0.421665 | tig0040546:+6302 | Msa1459910:CDS |
| TTTGGATCTGGTTATGGAAT+GGG | 0.422212 | tig0040546:+5936 | Msa1459910:CDS |
| CGGACTTGGTGGCGCACCTT+CGG | 0.424422 | tig0040546:+6535 | Msa1459910:CDS |
| GCATTTGCACCATTTGGATC+TGG | 0.433796 | tig0040546:+5924 | Msa1459910:CDS |
| CGTACTCGAAAGATATTTGT+TGG | 0.441713 | tig0040546:+5513 | Msa1459910:CDS |
| GGAGGGAATGCAAATTTCAA+TGG | 0.441921 | tig0040546:+5993 | Msa1459910:CDS |
| GGATCTGGTCCCTTCGGTTA+CGG | 0.442912 | tig0040546:+6515 | Msa1459910:CDS |
| GATAGTGGCAAGCTATTTAT+CGG | 0.442915 | tig0040546:+4777 | Msa1459910:CDS |
| GATAAAATGCAATCCGATAG+TGG | 0.444623 | tig0040546:+4762 | Msa1459910:intron |
| AAGACGTTTCATGAATTGAA+TGG | 0.446280 | tig0040546:+5699 | Msa1459910:CDS |
| CCTCTCAGTGGATACAACTA+TGG | 0.448490 | tig0040546:+5783 | Msa1459910:CDS |
| GCATTTCGGCCACCAGCAAC+CGG | 0.451852 | tig0040546:-5903 | Msa1459910:intergenic |
| TTCAATGGCAATCTTAGCTA+TGG | 0.455039 | tig0040546:+6008 | Msa1459910:CDS |
| CTGTCAGTGGTTATGGACTT+CGG | 0.456654 | tig0040546:+5862 | Msa1459910:CDS |
| CGGTCTATGGGGACACCACT+TGG | 0.459862 | tig0040546:+6468 | Msa1459910:CDS |
| TCCAATGCATACATTGGATC+AGG | 0.460296 | tig0040546:+6188 | Msa1459910:CDS |
| GGGAATGGAAGCCTCAACTA+TGG | 0.461149 | tig0040546:+6149 | Msa1459910:CDS |
| ACTTCTCCCGGTTATGTTGG+TGG | 0.461953 | tig0040546:+6572 | Msa1459910:CDS |
| ATCAGCGGCTCCAATAGGTT+TGG | 0.462740 | tig0040546:+6053 | Msa1459910:CDS |
| AGGCGAAGAAAGCTGTTCCT+AGG | 0.462848 | tig0040546:+5430 | Msa1459910:CDS |
| TCTTCATACTCTACATCAAA+TGG | 0.463413 | tig0040546:+6404 | Msa1459910:CDS |
| AGGGTCAATAGTTTCTTGAA+TGG | 0.463707 | tig0040546:+5813 | Msa1459910:CDS |
| ATCTTAAGATTTCTTCATCT+GGG | 0.464032 | tig0040546:+4197 | Msa1459910:five_prime_UTR |
| TTCAGTGACTCGAAACTTGT+GGG | 0.464785 | tig0040546:+6127 | Msa1459910:CDS |
| TTTACAACAATTCGGTCTAT+GGG | 0.465614 | tig0040546:+6456 | Msa1459910:CDS |
| AATGTTGGAGGAAATGCATT+TGG | 0.468936 | tig0040546:+6218 | Msa1459910:CDS |
| GAGGAGAGCGGGTAGGTCCT+GGG | 0.471867 | tig0040546:-5764 | Msa1459910:intergenic |
| ATAATGAAAGATCGGACAAC+TGG | 0.474467 | tig0040546:+4876 | Msa1459910:CDS |
| TTGGCAATACTGGAGTCAAC+TGG | 0.476374 | tig0040546:+6237 | Msa1459910:CDS |
| GGCAGCATCCATGGTTCTCC+TGG | 0.477383 | tig0040546:+5483 | Msa1459910:CDS |
| TCCTGATCCAATGTATGCAT+TGG | 0.477405 | tig0040546:-6189 | Msa1459910:intergenic |
| GTGATAAATCCAAAGCCTCT+TGG | 0.479962 | tig0040546:-5639 | Msa1459910:intergenic |
| GATGACAATATAGATATTGT+CGG | 0.480388 | tig0040546:-4411 | Msa1459910:intergenic |
| ATTTGGATCTGGTTATGGAA+TGG | 0.480660 | tig0040546:+5935 | Msa1459910:CDS |
| TTACCACTTTCATATCCAAC+AGG | 0.481210 | tig0040546:-6080 | Msa1459910:intergenic |
| ACACAAATGAAGAGCGACTC+AGG | 0.484238 | tig0040546:+4814 | Msa1459910:CDS |
| GCGAATTCCAATGCATACAT+TGG | 0.490062 | tig0040546:+6182 | Msa1459910:CDS |
| GGGAGGGAACAATGTGTCAC+AGG | 0.491264 | tig0040546:+6286 | Msa1459910:CDS |
| AACATAACCGGGAGAAGTCT+TGG | 0.491823 | tig0040546:-6567 | Msa1459910:intergenic |
| AGAGATGGATCTGGTCCCTT+CGG | 0.492162 | tig0040546:+6509 | Msa1459910:CDS |
| CATCTGTTATAGTCCCAAAC+TGG | 0.492506 | tig0040546:-5584 | Msa1459910:intergenic |
| ATCCATGGTTCTCCTGGTCC+AGG | 0.495364 | tig0040546:+5489 | Msa1459910:CDS |
| CTTCGCCGATTTCTGGACAT+GGG | 0.496859 | tig0040546:+6264 | Msa1459910:CDS |
| TGGCAATCTTAGCTATGGAC+GGG | 0.497904 | tig0040546:+6013 | Msa1459910:CDS |
| TGGCAACAATGGTTATGGAT+TGG | 0.499108 | tig0040546:+6334 | Msa1459910:CDS |
| GCATACATTGGATCAGGAAG+TGG | 0.499227 | tig0040546:+6194 | Msa1459910:CDS |
| CCCTTCGGTTACGGACTTGG+TGG | 0.499873 | tig0040546:+6524 | Msa1459910:CDS |
| TTGGAGCCGCTGATGAAGTA+AGG | 0.500786 | tig0040546:-6044 | Msa1459910:intergenic |
| ATGGACTTCGGGTGGATGGT+AGG | 0.503258 | tig0040546:+5874 | Msa1459910:CDS |
| TCTTCGCCGATTTCTGGACA+TGG | 0.506686 | tig0040546:+6263 | Msa1459910:CDS |
| TTCTTGAATGGCTTCAATCA+GGG | 0.506734 | tig0040546:+5825 | Msa1459910:CDS |
| GGTTATGGATTGGGGACTGA+AGG | 0.507374 | tig0040546:+6344 | Msa1459910:CDS |
| AATAGGTTTGGCAGTCCTGT+TGG | 0.507880 | tig0040546:+6065 | Msa1459910:CDS |
| GTTTCTGCCAAGACTTCTCC+CGG | 0.512402 | tig0040546:+6560 | Msa1459910:CDS |
| GATAAATAGCTTGCCACTAT+CGG | 0.512544 | tig0040546:-4775 | Msa1459910:intergenic |
| GTTCCCAAGGAGTTATCCCC+AGG | 0.512565 | tig0040546:+5747 | Msa1459910:CDS |
| GAAGAAATCTTAAGATCTGA+GGG | 0.519188 | tig0040546:-4190 | Msa1459910:intergenic |
| GGTCCTGGGGATAACTCCTT+GGG | 0.519948 | tig0040546:-5750 | Msa1459910:intergenic |
| GATGTAGAGTATGAAGATGT+TGG | 0.525251 | tig0040546:-6398 | Msa1459910:intergenic |
| TCGAGTCACTGAACTGAAGA+AGG | 0.526474 | tig0040546:-6117 | Msa1459910:intergenic |
| AACAATGTGTCACAGGGTAG+TGG | 0.527545 | tig0040546:+6293 | Msa1459910:CDS |
| AAGACTTCTCCCGGTTATGT+TGG | 0.531035 | tig0040546:+6569 | Msa1459910:CDS |
| TTAAATCAAGCAATGAATCA+AGG | 0.531564 | tig0040546:-4364 | Msa1459910:intergenic |
| TTCTGAAGAAGCTGTTGACC+AGG | 0.531868 | tig0040546:+5668 | Msa1459910:CDS |
| GATACAACTATGGTCTGAGT+AGG | 0.534677 | tig0040546:+5793 | Msa1459910:CDS |
| TCAGGAAGTGGGAATGTTGG+AGG | 0.535187 | tig0040546:+6206 | Msa1459910:CDS |
| GTTATGGATTGGGGACTGAA+GGG | 0.539193 | tig0040546:+6345 | Msa1459910:CDS |
| AGGTCCTGGGGATAACTCCT+TGG | 0.539205 | tig0040546:-5751 | Msa1459910:intergenic |
| AGAACTAGCGGCAGCATCCA+TGG | 0.540555 | tig0040546:+5474 | Msa1459910:CDS |
| TGAAGAAATCTTAAGATCTG+AGG | 0.541551 | tig0040546:-4191 | Msa1459910:intergenic |
| GTATCCACTGAGAGGAGAGC+GGG | 0.544247 | tig0040546:-5775 | Msa1459910:intergenic |
| GGATCAGGAAGTGGGAATGT+TGG | 0.544657 | tig0040546:+6203 | Msa1459910:CDS |
| GGTGGATGGTAGGTTCAGTC+CGG | 0.547575 | tig0040546:+5884 | Msa1459910:CDS |
| GGTTATGGACTTCGGGTGGA+TGG | 0.547930 | tig0040546:+5870 | Msa1459910:CDS |
| AGAGGGTAGGTTCATTATCT+GGG | 0.549589 | tig0040546:-4145 | Msa1459910:intergenic |
| AAAAGAAGAAGAAAAGGGTG+GGG | 0.550920 | tig0040546:+4115 | Msa1459910:five_prime_UTR |
| TTTGCATTCCCTCCAAAACC+AGG | 0.550961 | tig0040546:-5984 | Msa1459910:intergenic |
| GTTCAGTGACTCGAAACTTG+TGG | 0.552521 | tig0040546:+6126 | Msa1459910:CDS |
| GGCAATCTTGGATATGGAGG+TGG | 0.555020 | tig0040546:+6314 | Msa1459910:CDS |
| GGATTGGGGACTGAAGGGTA+TGG | 0.556882 | tig0040546:+6350 | Msa1459910:CDS |
| AATTCTGAGAGAGATGGATC+TGG | 0.557338 | tig0040546:+6500 | Msa1459910:CDS |
| TCTTCAAATTCTGAGAGAGA+TGG | 0.557905 | tig0040546:+6494 | Msa1459910:CDS |
| AAGCAGTGATAATGAAAGAT+CGG | 0.559068 | tig0040546:+4868 | Msa1459910:CDS |
| AGAAGAAGAAAAGGGTGGGG+AGG | 0.560763 | tig0040546:+4118 | Msa1459910:five_prime_UTR |
| GGATATGGAGGTGGCAACAA+TGG | 0.566057 | tig0040546:+6323 | Msa1459910:CDS |
| GCAACAATGGTTATGGATTG+GGG | 0.566889 | tig0040546:+6336 | Msa1459910:CDS |
| CAAGAGAAGCACAACATCGA+TGG | 0.568209 | tig0040546:+4960 | Msa1459910:CDS |
| AGGAGAGCGGGTAGGTCCTG+GGG | 0.568371 | tig0040546:-5763 | Msa1459910:intergenic |
| TTCGCCGATTTCTGGACATG+GGG | 0.568888 | tig0040546:+6265 | Msa1459910:CDS |
| CACAATGAGATTAAGAACAG+AGG | 0.569778 | tig0040546:-4163 | Msa1459910:intergenic |
| ACTCGAAAGATATTTGTTGG+AGG | 0.570498 | tig0040546:+5516 | Msa1459910:CDS |
| GGTCAAGCGAGCAGTTCCCA+AGG | 0.571882 | tig0040546:+5734 | Msa1459910:CDS |
| TACTCTACATCAAATGGTGG+TGG | 0.572424 | tig0040546:+6410 | Msa1459910:CDS |
| ATGGCAATCTTAGCTATGGA+CGG | 0.574297 | tig0040546:+6012 | Msa1459910:CDS |
| AGGTTCAGTCCGGTTGCTGG+TGG | 0.575407 | tig0040546:+5894 | Msa1459910:CDS |
| CGGACAACTGGTAGAGCTCG+TGG | 0.575457 | tig0040546:+4888 | Msa1459910:CDS |
| TCAAATGGTGGTGGTGTCGA+TGG | 0.578644 | tig0040546:+6419 | Msa1459910:CDS |
| CAGAATTTGATCCATAGTTG+AGG | 0.580151 | tig0040546:-6160 | Msa1459910:intergenic |
| ACAATGAGATTAAGAACAGA+GGG | 0.581804 | tig0040546:-4162 | Msa1459910:intergenic |
| GGCGAAGAAAGCTGTTCCTA+GGG | 0.581977 | tig0040546:+5431 | Msa1459910:CDS |
| AATAAAAGGCAGCCAAATAG+GGG | 0.583343 | tig0040546:+6605 | Msa1459910:CDS |
| ATTCCATAACCAGATCCAAA+TGG | 0.585399 | tig0040546:-5933 | Msa1459910:intergenic |
| TGAGGATTATATAGTGTGAG+AGG | 0.587024 | tig0040546:-3920 | Msa1459910:intergenic |
| CCAAAACCAGGACTCAAACC+AGG | 0.587155 | tig0040546:-5972 | Msa1459910:intergenic |
| ATTGAATGGTAAAATGGTTG+AGG | 0.589220 | tig0040546:+5713 | Msa1459910:CDS |
| AATACATTCTGATCGTCCCT+AGG | 0.590803 | tig0040546:-5447 | Msa1459910:intergenic |
| TATTTATCGGTGGAATATCG+TGG | 0.592718 | tig0040546:+4790 | Msa1459910:CDS |
| GCACAACATCGATGGAAGGA+TGG | 0.596421 | tig0040546:+4968 | Msa1459910:CDS |
| GCCACCAAGTCCGTAACCGA+AGG | 0.601691 | tig0040546:-6525 | Msa1459910:intergenic |
| TGAAGATGTTGGTGCAAGAG+TGG | 0.603368 | tig0040546:-6387 | Msa1459910:intergenic |
| GTTGGATATGAAAGTGGTAA+CGG | 0.610186 | tig0040546:+6083 | Msa1459910:CDS |
| GTATTTCAGTACTTATGGAG+AGG | 0.612839 | tig0040546:+4839 | Msa1459910:CDS |
| ACGACAATATCTGCAACAGC+TGG | 0.617462 | tig0040546:-4936 | Msa1459910:intergenic |
| GGCAATCTTAGCTATGGACG+GGG | 0.618662 | tig0040546:+6014 | Msa1459910:CDS |
| ATTTATCGGTGGAATATCGT+GGG | 0.618688 | tig0040546:+4791 | Msa1459910:CDS |
| ATACAACTATGGTCTGAGTA+GGG | 0.621941 | tig0040546:+5794 | Msa1459910:CDS |
| AATATCTTTCGAGTACGACC+TGG | 0.622412 | tig0040546:-5507 | Msa1459910:intergenic |
| CATACATTGGATCAGGAAGT+GGG | 0.623256 | tig0040546:+6195 | Msa1459910:CDS |
| GAAGGGTATGGAAGAAGCAG+TGG | 0.627348 | tig0040546:+6362 | Msa1459910:CDS |
| TTAAATCCTTACTTCATCAG+CGG | 0.627455 | tig0040546:+6038 | Msa1459910:CDS |
| GAGAGAGGCTGCGAGATGTG+AGG | 0.630090 | tig0040546:-3943 | Msa1459910:intergenic |
| CACAAATGAAGAGCGACTCA+GGG | 0.630913 | tig0040546:+4815 | Msa1459910:CDS |
| AGAAGCACAACATCGATGGA+AGG | 0.632051 | tig0040546:+4964 | Msa1459910:CDS |
| GGAGGGAACAATGTGTCACA+GGG | 0.632586 | tig0040546:+6287 | Msa1459910:CDS |
| CCACCAAGTCCGTAACCGAA+GGG | 0.642362 | tig0040546:-6524 | Msa1459910:intergenic |
| GGATATGAAAGTGGTAACGG+AGG | 0.645295 | tig0040546:+6086 | Msa1459910:CDS |
| CACAACACTCAGAGGCCAAG+AGG | 0.646935 | tig0040546:+5624 | Msa1459910:CDS |
| AGGCTGCGAGATGTGAGGTG+AGG | 0.646991 | tig0040546:-3938 | Msa1459910:intergenic |
| AGTCCTGTTGGATATGAAAG+TGG | 0.648675 | tig0040546:+6077 | Msa1459910:CDS |
| AGTGGCAATCTTGGATATGG+AGG | 0.650388 | tig0040546:+6311 | Msa1459910:CDS |
| TGAGATTAAGAACAGAGGGT+AGG | 0.653048 | tig0040546:-4158 | Msa1459910:intergenic |
| TCAGTGACTCGAAACTTGTG+GGG | 0.656104 | tig0040546:+6128 | Msa1459910:CDS |
| TTACAACAATTCGGTCTATG+GGG | 0.656588 | tig0040546:+6457 | Msa1459910:CDS |
| CAGTGGTTATGGACTTCGGG+TGG | 0.656987 | tig0040546:+5866 | Msa1459910:CDS |
| GTATAACCACCAACATAACC+GGG | 0.661434 | tig0040546:-6578 | Msa1459910:intergenic |
| GAAACGTCTTAAGTAAGACC+TGG | 0.661991 | tig0040546:-5686 | Msa1459910:intergenic |
| TCGCCGATTTCTGGACATGG+GGG | 0.663346 | tig0040546:+6266 | Msa1459910:CDS |
| TATAGTCCAAGTACTGTCAG+TGG | 0.666281 | tig0040546:+5849 | Msa1459910:CDS |
| TGTATCCACTGAGAGGAGAG+CGG | 0.671738 | tig0040546:-5776 | Msa1459910:intergenic |
| TCATACTCTACATCAAATGG+TGG | 0.675750 | tig0040546:+6407 | Msa1459910:CDS |
| AAATCTTAAGATCTGAGGGG+AGG | 0.679194 | tig0040546:-4186 | Msa1459910:intergenic |
| GTCTTGGCAGAAACATCCGA+AGG | 0.680409 | tig0040546:-6551 | Msa1459910:intergenic |
| AATGTATTGAGTAGAACTAG+CGG | 0.682442 | tig0040546:+5462 | Msa1459910:CDS |
| CCATAGTTGTATCCACTGAG+AGG | 0.683991 | tig0040546:-5783 | Msa1459910:intergenic |
| GACCTGGACCAGGAGAACCA+TGG | 0.685524 | tig0040546:-5491 | Msa1459910:intergenic |
| TGTATGATCACAACACTCAG+AGG | 0.686370 | tig0040546:+5616 | Msa1459910:CDS |
| AGTGGCAAGCTATTTATCGG+TGG | 0.687015 | tig0040546:+4780 | Msa1459910:CDS |
| AGAATTTGAAGATCGCCAAG+TGG | 0.701973 | tig0040546:-6483 | Msa1459910:intergenic |
| CAGTGACTCGAAACTTGTGG+GGG | 0.709575 | tig0040546:+6129 | Msa1459910:CDS |
| AAGAAATCTTAAGATCTGAG+GGG | 0.735898 | tig0040546:-4189 | Msa1459900:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATCTAAAATTAAACAAT+TGG | + | tig0040546:4090-4109 | Msa1459910:five_prime_UTR | 10.0% |
| !!! | TTTGTTATGTTTTATTTTTT+TGG | + | tig0040546:4278-4297 | Msa1459910:intron | 10.0% |
| !!! | ATTTTTGTTTTTGTTTTTTC+AGG | + | tig0040546:4325-4344 | Msa1459910:intron | 15.0% |
| !!! | TTTTTTGTTTAGTTTTATGT+TGG | + | tig0040546:4567-4586 | Msa1459910:intron | 15.0% |
| !!! | AAACATAACACAAATTTTAT+CGG | - | tig0040546:4625-4644 | Msa1459910:intergenic | 15.0% |
| !!! | TTATTGATGTTTTATAAGTT+TGG | + | tig0040546:4644-4663 | Msa1459910:intron | 15.0% |
| !!! | TTGGTGTTATTGTTTTTTTA+AGG | + | tig0040546:4586-4605 | Msa1459910:intron | 20.0% |
| !!! | GTTTTTTTAAGGAATTTGAT+TGG | + | tig0040546:4597-4616 | Msa1459910:intron | 20.0% |
| !! | CTAATGCAATATAATTCAAA+AGG | - | tig0040546:5059-5078 | Msa1459910:intergenic | 20.0% |
| !! | TCATAAACAGTTATATGATT+GGG | - | tig0040546:5196-5215 | Msa1459910:intergenic | 20.0% |
| !! | ATCATAAACAGTTATATGAT+TGG | - | tig0040546:5197-5216 | Msa1459910:intergenic | 20.0% |
| !! | ATTAGAGAATGAAGTATATA+GGG | - | tig0040546:5306-5325 | Msa1459910:intergenic | 20.0% |
| !! | TATTAACTATAAATCACAAG+GGG | - | tig0040546:5387-5406 | Msa1459910:intergenic | 20.0% |
| !! | GTATTAACTATAAATCACAA+GGG | - | tig0040546:5388-5407 | Msa1459910:intergenic | 20.0% |
| !! | AGTATTAACTATAAATCACA+AGG | - | tig0040546:5389-5408 | Msa1459910:intergenic | 20.0% |
| !! | TACAATACAAACCTAAAAAT+AGG | + | tig0040546:6690-6709 | Msa1459910:three_prime_UTR | 20.0% |
| !! | ACAATACAAACCTAAAAATA+GGG | + | tig0040546:6691-6710 | Msa1459910:three_prime_UTR | 20.0% |
| !! | GAGAAAAAGTTTAATTGTTA+CGG | + | tig0040546:6716-6735 | Msa1459910:three_prime_UTR | 20.0% |
| ! | TTGGAAAAAAGAAGAAGAAA+AGG | + | tig0040546:4109-4128 | Msa1459910:five_prime_UTR | 25.0% |
| ! | TGGAAAAAAGAAGAAGAAAA+GGG | + | tig0040546:4110-4129 | Msa1459910:five_prime_UTR | 25.0% |
| ! | ATCTTAAGATTTCTTCATCT+GGG | + | tig0040546:4197-4216 | Msa1459910:five_prime_UTR | 25.0% |
| ! | TTAAATCAAGCAATGAATCA+AGG | - | tig0040546:4367-4386 | Msa1459910:intergenic | 25.0% |
| ! | TTGATTCATTGCTTGATTTA+AGG | + | tig0040546:4366-4385 | Msa1459910:five_prime_UTR | 25.0% |
| ! | GATGACAATATAGATATTGT+CGG | - | tig0040546:4414-4433 | Msa1459910:intergenic | 25.0% |
| !!! | TCATCTTTTTACACTTTTTG+AGG | + | tig0040546:4429-4448 | Msa1459910:five_prime_UTR | 25.0% |
| !!! | TAAGGTATTGTATTGTTTGT+TGG | + | tig0040546:4465-4484 | Msa1459910:intron | 25.0% |
| !! | GGTTTGATTTATCTTAAACT+AGG | + | tig0040546:4534-4553 | Msa1459910:intron | 25.0% |
| !!! | TGTATTGGTTTTAGTTTTGA+TGG | + | tig0040546:4708-4727 | Msa1459910:intron | 25.0% |
| ! | CATTAGAGAATGAAGTATAT+AGG | - | tig0040546:5307-5326 | Msa1459910:intergenic | 25.0% |
| ! | ATTAACTATAAATCACAAGG+GGG | - | tig0040546:5386-5405 | Msa1459910:intergenic | 25.0% |
| ! | TCATGAATTGAATGGTAAAA+TGG | + | tig0040546:5707-5726 | Msa1459910:CDS | 25.0% |
| !!! | TGCTGATTTTTACAACAATT+CGG | + | tig0040546:6448-6467 | Msa1459910:CDS | 25.0% |
| ! | GTGGTTATACTGTTAATAAA+AGG | + | tig0040546:6591-6610 | Msa1459910:CDS | 25.0% |
| !!! | TTTTTCTCAACCCTATTTTT+AGG | - | tig0040546:6704-6723 | Msa1459910:intergenic | 25.0% |
| !! | TAATTGTTACGGTTTTTGTT+TGG | + | tig0040546:6727-6746 | Msa1459910:three_prime_UTR | 25.0% |
| AAGCAAAAAACTATGAAGAG+AGG | - | tig0040546:4029-4048 | None:intergenic | 30.0% | |
| AAAAAAGAAGAAGAAAAGGG+TGG | + | tig0040546:4113-4132 | Msa1459910:five_prime_UTR | 30.0% | |
| AAAAAGAAGAAGAAAAGGGT+GGG | + | tig0040546:4114-4133 | Msa1459910:five_prime_UTR | 30.0% | |
| ACAATGAGATTAAGAACAGA+GGG | - | tig0040546:4165-4184 | Msa1459910:intergenic | 30.0% | |
| AAGAAATCTTAAGATCTGAG+GGG | - | tig0040546:4192-4211 | Msa1459910:intergenic | 30.0% | |
| GAAGAAATCTTAAGATCTGA+GGG | - | tig0040546:4193-4212 | Msa1459910:intergenic | 30.0% | |
| TGAAGAAATCTTAAGATCTG+AGG | - | tig0040546:4194-4213 | Msa1459910:intergenic | 30.0% | |
| GATCTTAAGATTTCTTCATC+TGG | + | tig0040546:4196-4215 | Msa1459910:five_prime_UTR | 30.0% | |
| ! | TAATGATAATGCTAGCATGT+TGG | + | tig0040546:4513-4532 | Msa1459910:intron | 30.0% |
| !! | ATGCTACTTGCATTTTGTAT+TGG | + | tig0040546:4693-4712 | Msa1459910:intron | 30.0% |
| ! | AAGCAGTGATAATGAAAGAT+CGG | + | tig0040546:4868-4887 | Msa1459910:CDS | 30.0% |
| TTCCATCCAAGATTTGAATT+CGG | + | tig0040546:5122-5141 | Msa1459910:intron | 30.0% | |
| !! | TCCTTAGCTACATTTTAAGA+TGG | + | tig0040546:5261-5280 | Msa1459910:intron | 30.0% |
| TCCATCTTAAAATGTAGCTA+AGG | - | tig0040546:5265-5284 | Msa1459910:intergenic | 30.0% | |
| TTAACTATAAATCACAAGGG+GGG | - | tig0040546:5385-5404 | Msa1459910:intergenic | 30.0% | |
| ! | ATACTTTTGCATCTTTCACT+AGG | + | tig0040546:5404-5423 | Msa1459910:intron | 30.0% |
| AATGTATTGAGTAGAACTAG+CGG | + | tig0040546:5462-5481 | Msa1459910:CDS | 30.0% | |
| AAGACGTTTCATGAATTGAA+TGG | + | tig0040546:5699-5718 | Msa1459910:CDS | 30.0% | |
| ATTGAATGGTAAAATGGTTG+AGG | + | tig0040546:5713-5732 | Msa1459910:CDS | 30.0% | |
| TTAAATCCTTACTTCATCAG+CGG | + | tig0040546:6038-6057 | Msa1459910:CDS | 30.0% | |
| TCTTCATACTCTACATCAAA+TGG | + | tig0040546:6404-6423 | Msa1459910:CDS | 30.0% | |
| ! | TTTTACAACAATTCGGTCTA+TGG | + | tig0040546:6455-6474 | Msa1459910:CDS | 30.0% |
| TTTACAACAATTCGGTCTAT+GGG | + | tig0040546:6456-6475 | Msa1459910:CDS | 30.0% | |
| TTAATAAAAGGCAGCCAAAT+AGG | + | tig0040546:6603-6622 | Msa1459910:CDS | 30.0% | |
| TAATAAAAGGCAGCCAAATA+GGG | + | tig0040546:6604-6623 | Msa1459910:CDS | 30.0% | |
| TGAGGATTATATAGTGTGAG+AGG | - | tig0040546:3923-3942 | None:intergenic | 35.0% | |
| AAAAGAAGAAGAAAAGGGTG+GGG | + | tig0040546:4115-4134 | Msa1459910:five_prime_UTR | 35.0% | |
| CACAATGAGATTAAGAACAG+AGG | - | tig0040546:4166-4185 | Msa1459910:intergenic | 35.0% | |
| CGGATTCAGTTAAGGATTAT+CGG | - | tig0040546:4394-4413 | Msa1459910:intergenic | 35.0% | |
| GATATTGTCGGATTCAGTTA+AGG | - | tig0040546:4402-4421 | Msa1459910:intergenic | 35.0% | |
| TGAGGTTGTCTCACAATTTA+AGG | + | tig0040546:4447-4466 | Msa1459910:five_prime_UTR | 35.0% | |
| GATAAAATGCAATCCGATAG+TGG | + | tig0040546:4762-4781 | Msa1459910:intron | 35.0% | |
| ! | GATAAATAGCTTGCCACTAT+CGG | - | tig0040546:4778-4797 | Msa1459910:intergenic | 35.0% |
| ! | GATAGTGGCAAGCTATTTAT+CGG | + | tig0040546:4777-4796 | Msa1459910:CDS | 35.0% |
| TATTTATCGGTGGAATATCG+TGG | + | tig0040546:4790-4809 | Msa1459910:CDS | 35.0% | |
| ATTTATCGGTGGAATATCGT+GGG | + | tig0040546:4791-4810 | Msa1459910:CDS | 35.0% | |
| !! | AGGGAGTATTTCAGTACTTA+TGG | + | tig0040546:4834-4853 | Msa1459910:CDS | 35.0% |
| GTATTTCAGTACTTATGGAG+AGG | + | tig0040546:4839-4858 | Msa1459910:CDS | 35.0% | |
| ATAATGAAAGATCGGACAAC+TGG | + | tig0040546:4876-4895 | Msa1459910:CDS | 35.0% | |
| AATCCATGGACTTAAAAGAG+GGG | - | tig0040546:5010-5029 | Msa1459910:intergenic | 35.0% | |
| CAATCCATGGACTTAAAAGA+GGG | - | tig0040546:5011-5030 | Msa1459910:intergenic | 35.0% | |
| TCATGTCAAAATGCAATCCA+TGG | - | tig0040546:5024-5043 | Msa1459910:intergenic | 35.0% | |
| TCCATCCAAGATTTGAATTC+GGG | + | tig0040546:5123-5142 | Msa1459910:intron | 35.0% | |
| TAGAACCCGAATTCAAATCT+TGG | - | tig0040546:5131-5150 | Msa1459910:intergenic | 35.0% | |
| !!! | ACATTTTAAGATGGACCAAG+AGG | + | tig0040546:5270-5289 | Msa1459910:intron | 35.0% |
| TAGGGAAATATACTTCCTCT+TGG | - | tig0040546:5288-5307 | Msa1459910:intergenic | 35.0% | |
| TAACTATAAATCACAAGGGG+GGG | - | tig0040546:5384-5403 | Msa1459910:intergenic | 35.0% | |
| CGTACTCGAAAGATATTTGT+TGG | + | tig0040546:5513-5532 | Msa1459910:CDS | 35.0% | |
| ! | ACTCGAAAGATATTTGTTGG+AGG | + | tig0040546:5516-5535 | Msa1459910:CDS | 35.0% |
| !! | AAGAAGTACTTTGACCAGTT+TGG | + | tig0040546:5570-5589 | Msa1459910:CDS | 35.0% |
| !! | AGAAGTACTTTGACCAGTTT+GGG | + | tig0040546:5571-5590 | Msa1459910:CDS | 35.0% |
| ATACAACTATGGTCTGAGTA+GGG | + | tig0040546:5794-5813 | Msa1459910:CDS | 35.0% | |
| AGGGTCAATAGTTTCTTGAA+TGG | + | tig0040546:5813-5832 | Msa1459910:CDS | 35.0% | |
| TTTCTTGAATGGCTTCAATC+AGG | + | tig0040546:5824-5843 | Msa1459910:CDS | 35.0% | |
| TTCTTGAATGGCTTCAATCA+GGG | + | tig0040546:5825-5844 | Msa1459910:CDS | 35.0% | |
| CAAATGGTGCAAATGCATTT+CGG | - | tig0040546:5920-5939 | Msa1459910:intergenic | 35.0% | |
| ATTCCATAACCAGATCCAAA+TGG | - | tig0040546:5936-5955 | Msa1459910:intergenic | 35.0% | |
| ATTTGGATCTGGTTATGGAA+TGG | + | tig0040546:5935-5954 | Msa1459910:CDS | 35.0% | |
| TTTGGATCTGGTTATGGAAT+GGG | + | tig0040546:5936-5955 | Msa1459910:CDS | 35.0% | |
| TTCAATGGCAATCTTAGCTA+TGG | + | tig0040546:6008-6027 | Msa1459910:CDS | 35.0% | |
| TTACCACTTTCATATCCAAC+AGG | - | tig0040546:6083-6102 | Msa1459910:intergenic | 35.0% | |
| GTTGGATATGAAAGTGGTAA+CGG | + | tig0040546:6083-6102 | Msa1459910:CDS | 35.0% | |
| CAGAATTTGATCCATAGTTG+AGG | - | tig0040546:6163-6182 | Msa1459910:intergenic | 35.0% | |
| AATGTTGGAGGAAATGCATT+TGG | + | tig0040546:6218-6237 | Msa1459910:CDS | 35.0% | |
| GATGTAGAGTATGAAGATGT+TGG | - | tig0040546:6401-6420 | Msa1459910:intergenic | 35.0% | |
| TCATACTCTACATCAAATGG+TGG | + | tig0040546:6407-6426 | Msa1459910:CDS | 35.0% | |
| TTACAACAATTCGGTCTATG+GGG | + | tig0040546:6457-6476 | Msa1459910:CDS | 35.0% | |
| ! | TCTTCAAATTCTGAGAGAGA+TGG | + | tig0040546:6494-6513 | Msa1459910:CDS | 35.0% |
| AGTATAACCACCAACATAAC+CGG | - | tig0040546:6582-6601 | Msa1459910:intergenic | 35.0% | |
| AATAAAAGGCAGCCAAATAG+GGG | + | tig0040546:6605-6624 | Msa1459910:CDS | 35.0% | |
| AGAGGGTAGGTTCATTATCT+GGG | - | tig0040546:4148-4167 | Msa1459910:intergenic | 40.0% | |
| TGAGATTAAGAACAGAGGGT+AGG | - | tig0040546:4161-4180 | Msa1459910:intergenic | 40.0% | |
| AAATCTTAAGATCTGAGGGG+AGG | - | tig0040546:4189-4208 | Msa1459910:intergenic | 40.0% | |
| CAGTACTTATGGAGAGGTTA+AGG | + | tig0040546:4845-4864 | Msa1459910:CDS | 40.0% | |
| GCAATCCATGGACTTAAAAG+AGG | - | tig0040546:5012-5031 | Msa1459910:intergenic | 40.0% | |
| ACCCGAATTCAAATCTTGGA+TGG | - | tig0040546:5127-5146 | Msa1459910:intergenic | 40.0% | |
| GTTATATGATTGGGCTCAAG+TGG | - | tig0040546:5187-5206 | Msa1459910:intergenic | 40.0% | |
| TTGCATCTTTCACTAGGTTG+AGG | + | tig0040546:5410-5429 | Msa1459910:intron | 40.0% | |
| AATACATTCTGATCGTCCCT+AGG | - | tig0040546:5450-5469 | Msa1459910:intergenic | 40.0% | |
| ! | AATATCTTTCGAGTACGACC+TGG | - | tig0040546:5510-5529 | Msa1459910:intergenic | 40.0% |
| CATCTGTTATAGTCCCAAAC+TGG | - | tig0040546:5587-5606 | Msa1459910:intergenic | 40.0% | |
| TGTATGATCACAACACTCAG+AGG | + | tig0040546:5616-5635 | Msa1459910:CDS | 40.0% | |
| GTGATAAATCCAAAGCCTCT+TGG | - | tig0040546:5642-5661 | Msa1459910:intergenic | 40.0% | |
| GAAACGTCTTAAGTAAGACC+TGG | - | tig0040546:5689-5708 | Msa1459910:intergenic | 40.0% | |
| GATACAACTATGGTCTGAGT+AGG | + | tig0040546:5793-5812 | Msa1459910:CDS | 40.0% | |
| ! | TATAGTCCAAGTACTGTCAG+TGG | + | tig0040546:5849-5868 | Msa1459910:CDS | 40.0% |
| CGAAATGCATTTGCACCATT+TGG | + | tig0040546:5918-5937 | Msa1459910:CDS | 40.0% | |
| ! | ATGGGTATGAATTTTGAGCC+TGG | + | tig0040546:5954-5973 | Msa1459910:CDS | 40.0% |
| GGAGGGAATGCAAATTTCAA+TGG | + | tig0040546:5993-6012 | Msa1459910:CDS | 40.0% | |
| ATGGCAATCTTAGCTATGGA+CGG | + | tig0040546:6012-6031 | Msa1459910:CDS | 40.0% | |
| AGTCCTGTTGGATATGAAAG+TGG | + | tig0040546:6077-6096 | Msa1459910:CDS | 40.0% | |
| TTCAGTGACTCGAAACTTGT+GGG | + | tig0040546:6127-6146 | Msa1459910:CDS | 40.0% | |
| GCGAATTCCAATGCATACAT+TGG | + | tig0040546:6182-6201 | Msa1459910:CDS | 40.0% | |
| TCCAATGCATACATTGGATC+AGG | + | tig0040546:6188-6207 | Msa1459910:CDS | 40.0% | |
| TCCTGATCCAATGTATGCAT+TGG | - | tig0040546:6192-6211 | Msa1459910:intergenic | 40.0% | |
| CATACATTGGATCAGGAAGT+GGG | + | tig0040546:6195-6214 | Msa1459910:CDS | 40.0% | |
| GGAAATGCATTTGGCAATAC+TGG | + | tig0040546:6227-6246 | Msa1459910:CDS | 40.0% | |
| TGGCAACAATGGTTATGGAT+TGG | + | tig0040546:6334-6353 | Msa1459910:CDS | 40.0% | |
| GGCAACAATGGTTATGGATT+GGG | + | tig0040546:6335-6354 | Msa1459910:CDS | 40.0% | |
| ! | GCAACAATGGTTATGGATTG+GGG | + | tig0040546:6336-6355 | Msa1459910:CDS | 40.0% |
| TACTCTACATCAAATGGTGG+TGG | + | tig0040546:6410-6429 | Msa1459910:CDS | 40.0% | |
| AGAATTTGAAGATCGCCAAG+TGG | - | tig0040546:6486-6505 | Msa1459910:intergenic | 40.0% | |
| ! | AATTCTGAGAGAGATGGATC+TGG | + | tig0040546:6500-6519 | Msa1459910:CDS | 40.0% |
| GTATAACCACCAACATAACC+GGG | - | tig0040546:6581-6600 | Msa1459910:intergenic | 40.0% | |
| AGAGACAAAGAGAGAGAGAG+AGG | - | tig0040546:3961-3980 | None:intergenic | 45.0% | |
| CAGAGGGTAGGTTCATTATC+TGG | - | tig0040546:4149-4168 | Msa1459910:intergenic | 45.0% | |
| TCATCTGGGTCGTCTTCAAT+TGG | + | tig0040546:4211-4230 | Msa1459910:five_prime_UTR | 45.0% | |
| AGCATCAGCATCACTACAGA+TGG | - | tig0040546:4678-4697 | Msa1459910:intergenic | 45.0% | |
| AGTGGCAAGCTATTTATCGG+TGG | + | tig0040546:4780-4799 | Msa1459910:CDS | 45.0% | |
| ACACAAATGAAGAGCGACTC+AGG | + | tig0040546:4814-4833 | Msa1459910:CDS | 45.0% | |
| CACAAATGAAGAGCGACTCA+GGG | + | tig0040546:4815-4834 | Msa1459910:CDS | 45.0% | |
| ACGACAATATCTGCAACAGC+TGG | - | tig0040546:4939-4958 | Msa1459910:intergenic | 45.0% | |
| ! | CAAGAGAAGCACAACATCGA+TGG | + | tig0040546:4960-4979 | Msa1459910:CDS | 45.0% |
| ! | AGAAGCACAACATCGATGGA+AGG | + | tig0040546:4964-4983 | Msa1459910:CDS | 45.0% |
| !! | TGTCCCCTCTTTTAAGTCCA+TGG | + | tig0040546:5004-5023 | Msa1459910:intron | 45.0% |
| ! | TTGAATTCGGGTTCTACCGA+AGG | + | tig0040546:5135-5154 | Msa1459910:intron | 45.0% |
| TGATGAGCTCCAGTTAAGGA+CGG | - | tig0040546:5163-5182 | Msa1459910:intergenic | 45.0% | |
| !! | TGGTTGATGAGCTCCAGTTA+AGG | - | tig0040546:5167-5186 | Msa1459910:intergenic | 45.0% |
| TATAAATCACAAGGGGGGGT+GGG | - | tig0040546:5380-5399 | Msa1459910:intergenic | 45.0% | |
| ! | TTCTGAAGAAGCTGTTGACC+AGG | + | tig0040546:5668-5687 | Msa1459910:CDS | 45.0% |
| CCATAGTTGTATCCACTGAG+AGG | - | tig0040546:5786-5805 | Msa1459910:intergenic | 45.0% | |
| CCTCTCAGTGGATACAACTA+TGG | + | tig0040546:5783-5802 | Msa1459910:CDS | 45.0% | |
| CCATAACCACTGACAGTACT+TGG | - | tig0040546:5858-5877 | Msa1459910:intergenic | 45.0% | |
| ! | CCAAGTACTGTCAGTGGTTA+TGG | + | tig0040546:5855-5874 | Msa1459910:CDS | 45.0% |
| CTGTCAGTGGTTATGGACTT+CGG | + | tig0040546:5862-5881 | Msa1459910:CDS | 45.0% | |
| TGTCAGTGGTTATGGACTTC+GGG | + | tig0040546:5863-5882 | Msa1459910:CDS | 45.0% | |
| GCATTTGCACCATTTGGATC+TGG | + | tig0040546:5924-5943 | Msa1459910:CDS | 45.0% | |
| GCACCATTTGGATCTGGTTA+TGG | + | tig0040546:5930-5949 | Msa1459910:CDS | 45.0% | |
| !!! | GTTTGAGTCCTGGTTTTGGA+GGG | + | tig0040546:5976-5995 | Msa1459910:CDS | 45.0% |
| TTTGCATTCCCTCCAAAACC+AGG | - | tig0040546:5987-6006 | Msa1459910:intergenic | 45.0% | |
| TGGCAATCTTAGCTATGGAC+GGG | + | tig0040546:6013-6032 | Msa1459910:CDS | 45.0% | |
| AACAGGACTGCCAAACCTAT+TGG | - | tig0040546:6066-6085 | Msa1459910:intergenic | 45.0% | |
| AATAGGTTTGGCAGTCCTGT+TGG | + | tig0040546:6065-6084 | Msa1459910:CDS | 45.0% | |
| !! | GGATATGAAAGTGGTAACGG+AGG | + | tig0040546:6086-6105 | Msa1459910:CDS | 45.0% |
| TCGAGTCACTGAACTGAAGA+AGG | - | tig0040546:6120-6139 | Msa1459910:intergenic | 45.0% | |
| GTTCAGTGACTCGAAACTTG+TGG | + | tig0040546:6126-6145 | Msa1459910:CDS | 45.0% | |
| TCAGTGACTCGAAACTTGTG+GGG | + | tig0040546:6128-6147 | Msa1459910:CDS | 45.0% | |
| GCATACATTGGATCAGGAAG+TGG | + | tig0040546:6194-6213 | Msa1459910:CDS | 45.0% | |
| TTGGCAATACTGGAGTCAAC+TGG | + | tig0040546:6237-6256 | Msa1459910:CDS | 45.0% | |
| AACAATGTGTCACAGGGTAG+TGG | + | tig0040546:6293-6312 | Msa1459910:CDS | 45.0% | |
| ! | GGTAGTGGCAATCTTGGATA+TGG | + | tig0040546:6308-6327 | Msa1459910:CDS | 45.0% |
| AGTGGCAATCTTGGATATGG+AGG | + | tig0040546:6311-6330 | Msa1459910:CDS | 45.0% | |
| !! | GTTATGGATTGGGGACTGAA+GGG | + | tig0040546:6345-6364 | Msa1459910:CDS | 45.0% |
| TGAAGATGTTGGTGCAAGAG+TGG | - | tig0040546:6390-6409 | Msa1459910:intergenic | 45.0% | |
| AACATAACCGGGAGAAGTCT+TGG | - | tig0040546:6570-6589 | Msa1459910:intergenic | 45.0% | |
| AAGACTTCTCCCGGTTATGT+TGG | + | tig0040546:6569-6588 | Msa1459910:CDS | 45.0% | |
| ATGTCGCTCTTACCCCTATT+TGG | - | tig0040546:6620-6639 | Msa1459910:intergenic | 45.0% | |
| !! | AAAATAATAATGAAAATAAA+AGG | - | tig0040546:5336-5355 | Msa1459910:intergenic | 5.0% |
| AGAAGAAGAAAAGGGTGGGG+AGG | + | tig0040546:4118-4137 | Msa1459910:five_prime_UTR | 50.0% | |
| ACTGGTAGAGCTCGTGGATT+TGG | + | tig0040546:4894-4913 | Msa1459910:CDS | 50.0% | |
| GCACAACATCGATGGAAGGA+TGG | + | tig0040546:4968-4987 | Msa1459910:CDS | 50.0% | |
| CCAGTTAAGGACGGATCCTT+CGG | - | tig0040546:5154-5173 | Msa1459910:intergenic | 50.0% | |
| ATAAATCACAAGGGGGGGTG+GGG | - | tig0040546:5379-5398 | Msa1459910:intergenic | 50.0% | |
| CTATAAATCACAAGGGGGGG+TGG | - | tig0040546:5381-5400 | Msa1459910:intergenic | 50.0% | |
| AGGCGAAGAAAGCTGTTCCT+AGG | + | tig0040546:5430-5449 | Msa1459910:CDS | 50.0% | |
| GGCGAAGAAAGCTGTTCCTA+GGG | + | tig0040546:5431-5450 | Msa1459910:CDS | 50.0% | |
| TGTATCCACTGAGAGGAGAG+CGG | - | tig0040546:5779-5798 | Msa1459910:intergenic | 50.0% | |
| ! | TTTGAGCCTGGTTTGAGTCC+TGG | + | tig0040546:5966-5985 | Msa1459910:CDS | 50.0% |
| CCAAAACCAGGACTCAAACC+AGG | - | tig0040546:5975-5994 | Msa1459910:intergenic | 50.0% | |
| !! | CCTGGTTTGAGTCCTGGTTT+TGG | + | tig0040546:5972-5991 | Msa1459910:CDS | 50.0% |
| !!! | GGTTTGAGTCCTGGTTTTGG+AGG | + | tig0040546:5975-5994 | Msa1459910:CDS | 50.0% |
| GGCAATCTTAGCTATGGACG+GGG | + | tig0040546:6014-6033 | Msa1459910:CDS | 50.0% | |
| TTGGAGCCGCTGATGAAGTA+AGG | - | tig0040546:6047-6066 | Msa1459910:intergenic | 50.0% | |
| ACTTCATCAGCGGCTCCAAT+AGG | + | tig0040546:6048-6067 | Msa1459910:CDS | 50.0% | |
| ATCAGCGGCTCCAATAGGTT+TGG | + | tig0040546:6053-6072 | Msa1459910:CDS | 50.0% | |
| CAGTGACTCGAAACTTGTGG+GGG | + | tig0040546:6129-6148 | Msa1459910:CDS | 50.0% | |
| ACTCGAAACTTGTGGGGGAA+TGG | + | tig0040546:6134-6153 | Msa1459910:CDS | 50.0% | |
| GGGAATGGAAGCCTCAACTA+TGG | + | tig0040546:6149-6168 | Msa1459910:CDS | 50.0% | |
| GGATCAGGAAGTGGGAATGT+TGG | + | tig0040546:6203-6222 | Msa1459910:CDS | 50.0% | |
| TCAGGAAGTGGGAATGTTGG+AGG | + | tig0040546:6206-6225 | Msa1459910:CDS | 50.0% | |
| !! | TGGAGTTCTTCGCCGATTTC+TGG | + | tig0040546:6257-6276 | Msa1459910:CDS | 50.0% |
| !! | TCTTCGCCGATTTCTGGACA+TGG | + | tig0040546:6263-6282 | Msa1459910:CDS | 50.0% |
| !! | CTTCGCCGATTTCTGGACAT+GGG | + | tig0040546:6264-6283 | Msa1459910:CDS | 50.0% |
| !! | TTCGCCGATTTCTGGACATG+GGG | + | tig0040546:6265-6284 | Msa1459910:CDS | 50.0% |
| GGAGGGAACAATGTGTCACA+GGG | + | tig0040546:6287-6306 | Msa1459910:CDS | 50.0% | |
| ! | TCACAGGGTAGTGGCAATCT+TGG | + | tig0040546:6302-6321 | Msa1459910:CDS | 50.0% |
| GGCAATCTTGGATATGGAGG+TGG | + | tig0040546:6314-6333 | Msa1459910:CDS | 50.0% | |
| GGATATGGAGGTGGCAACAA+TGG | + | tig0040546:6323-6342 | Msa1459910:CDS | 50.0% | |
| GGAGGTGGCAACAATGGTTA+TGG | + | tig0040546:6329-6348 | Msa1459910:CDS | 50.0% | |
| !! | GGTTATGGATTGGGGACTGA+AGG | + | tig0040546:6344-6363 | Msa1459910:CDS | 50.0% |
| ! | GAAGGGTATGGAAGAAGCAG+TGG | + | tig0040546:6362-6381 | Msa1459910:CDS | 50.0% |
| !! | TCAAATGGTGGTGGTGTCGA+TGG | + | tig0040546:6419-6438 | Msa1459910:CDS | 50.0% |
| AGAGATGGATCTGGTCCCTT+CGG | + | tig0040546:6509-6528 | Msa1459910:CDS | 50.0% | |
| GTCTTGGCAGAAACATCCGA+AGG | - | tig0040546:6554-6573 | Msa1459910:intergenic | 50.0% | |
| GTTTCTGCCAAGACTTCTCC+CGG | + | tig0040546:6560-6579 | Msa1459910:CDS | 50.0% | |
| ACTTCTCCCGGTTATGTTGG+TGG | + | tig0040546:6572-6591 | Msa1459910:CDS | 50.0% | |
| CCGAAGGATCCGTCCTTAAC+TGG | + | tig0040546:5151-5170 | Msa1459910:intron | 55.0% | |
| TAAATCACAAGGGGGGGTGG+GGG | - | tig0040546:5378-5397 | Msa1459910:intergenic | 55.0% | |
| AGAACTAGCGGCAGCATCCA+TGG | + | tig0040546:5474-5493 | Msa1459910:CDS | 55.0% | |
| ATCCATGGTTCTCCTGGTCC+AGG | + | tig0040546:5489-5508 | Msa1459910:CDS | 55.0% | |
| ! | TTTCGAGTACGACCTGGACC+AGG | - | tig0040546:5504-5523 | Msa1459910:intergenic | 55.0% |
| CACAACACTCAGAGGCCAAG+AGG | + | tig0040546:5624-5643 | Msa1459910:CDS | 55.0% | |
| ACTCAGAGGCCAAGAGGCTT+TGG | + | tig0040546:5630-5649 | Msa1459910:CDS | 55.0% | |
| GTTCCCAAGGAGTTATCCCC+AGG | + | tig0040546:5747-5766 | Msa1459910:CDS | 55.0% | |
| GGTCCTGGGGATAACTCCTT+GGG | - | tig0040546:5753-5772 | Msa1459910:intergenic | 55.0% | |
| AGGTCCTGGGGATAACTCCT+TGG | - | tig0040546:5754-5773 | Msa1459910:intergenic | 55.0% | |
| GTATCCACTGAGAGGAGAGC+GGG | - | tig0040546:5778-5797 | Msa1459910:intergenic | 55.0% | |
| CAGTGGTTATGGACTTCGGG+TGG | + | tig0040546:5866-5885 | Msa1459910:CDS | 55.0% | |
| GGTTATGGACTTCGGGTGGA+TGG | + | tig0040546:5870-5889 | Msa1459910:CDS | 55.0% | |
| ATGGACTTCGGGTGGATGGT+AGG | + | tig0040546:5874-5893 | Msa1459910:CDS | 55.0% | |
| GGTGGATGGTAGGTTCAGTC+CGG | + | tig0040546:5884-5903 | Msa1459910:CDS | 55.0% | |
| !! | TCGCCGATTTCTGGACATGG+GGG | + | tig0040546:6266-6285 | Msa1459910:CDS | 55.0% |
| CCTCCCCCATGTCCAGAAAT+CGG | - | tig0040546:6272-6291 | Msa1459910:intergenic | 55.0% | |
| ! | CGATTTCTGGACATGGGGGA+GGG | + | tig0040546:6270-6289 | Msa1459910:CDS | 55.0% |
| GGGAGGGAACAATGTGTCAC+AGG | + | tig0040546:6286-6305 | Msa1459910:CDS | 55.0% | |
| GGATTGGGGACTGAAGGGTA+TGG | + | tig0040546:6350-6369 | Msa1459910:CDS | 55.0% | |
| GGATCTGGTCCCTTCGGTTA+CGG | + | tig0040546:6515-6534 | Msa1459910:CDS | 55.0% | |
| CCACCAAGTCCGTAACCGAA+GGG | - | tig0040546:6527-6546 | Msa1459910:intergenic | 55.0% | |
| AGGCTGCGAGATGTGAGGTG+AGG | - | tig0040546:3941-3960 | None:intergenic | 60.0% | |
| GAGAGAGGCTGCGAGATGTG+AGG | - | tig0040546:3946-3965 | None:intergenic | 60.0% | |
| CGGACAACTGGTAGAGCTCG+TGG | + | tig0040546:4888-4907 | Msa1459910:CDS | 60.0% | |
| AAATCACAAGGGGGGGTGGG+GGG | - | tig0040546:5377-5396 | Msa1459910:intergenic | 60.0% | |
| GGCAGCATCCATGGTTCTCC+TGG | + | tig0040546:5483-5502 | Msa1459910:CDS | 60.0% | |
| GACCTGGACCAGGAGAACCA+TGG | - | tig0040546:5494-5513 | Msa1459910:intergenic | 60.0% | |
| GGTCAAGCGAGCAGTTCCCA+AGG | + | tig0040546:5734-5753 | Msa1459910:CDS | 60.0% | |
| GGTAGGTTCAGTCCGGTTGC+TGG | + | tig0040546:5891-5910 | Msa1459910:CDS | 60.0% | |
| AGGTTCAGTCCGGTTGCTGG+TGG | + | tig0040546:5894-5913 | Msa1459910:CDS | 60.0% | |
| GCATTTCGGCCACCAGCAAC+CGG | - | tig0040546:5906-5925 | Msa1459910:intergenic | 60.0% | |
| ! | CCGATTTCTGGACATGGGGG+AGG | + | tig0040546:6269-6288 | Msa1459910:CDS | 60.0% |
| CGGTCTATGGGGACACCACT+TGG | + | tig0040546:6468-6487 | Msa1459910:CDS | 60.0% | |
| GGTCCCTTCGGTTACGGACT+TGG | + | tig0040546:6521-6540 | Msa1459910:CDS | 60.0% | |
| CCCTTCGGTTACGGACTTGG+TGG | + | tig0040546:6524-6543 | Msa1459910:CDS | 60.0% | |
| GCCACCAAGTCCGTAACCGA+AGG | - | tig0040546:6528-6547 | Msa1459910:intergenic | 60.0% | |
| AGGAGAGCGGGTAGGTCCTG+GGG | - | tig0040546:5766-5785 | Msa1459910:intergenic | 65.0% | |
| GAGGAGAGCGGGTAGGTCCT+GGG | - | tig0040546:5767-5786 | Msa1459910:intergenic | 65.0% | |
| AGAGGAGAGCGGGTAGGTCC+TGG | - | tig0040546:5768-5787 | Msa1459910:intergenic | 65.0% | |
| CCACTGAGAGGAGAGCGGGT+AGG | - | tig0040546:5774-5793 | Msa1459910:intergenic | 65.0% | |
| CCTACCCGCTCTCCTCTCAG+TGG | + | tig0040546:5771-5790 | Msa1459910:CDS | 65.0% | |
| !! | CGGACTTGGTGGCGCACCTT+CGG | + | tig0040546:6535-6554 | Msa1459910:CDS | 65.0% |
| CACAAGGGGGGGTGGGGGGA+AGG | - | tig0040546:5373-5392 | Msa1459910:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0040546 | gene | 3916 | 6766 | 3916 | ID=Msa1459910;Name=Msa1459910 |
| tig0040546 | mRNA | 3916 | 6766 | 3916 | ID=Msa1459910-mRNA-1;Parent=Msa1459910;Name=Msa1459910-mRNA-1;_AED=0.13;_eAED=0.13;_QI=444|1|1|1|0.33|0.5|4|84|492 |
| tig0040546 | exon | 3916 | 4232 | 3916 | ID=Msa1459910-mRNA-1:exon:22479;Parent=Msa1459910-mRNA-1 |
| tig0040546 | exon | 4347 | 4468 | 4347 | ID=Msa1459910-mRNA-1:exon:22480;Parent=Msa1459910-mRNA-1 |
| tig0040546 | exon | 4763 | 4989 | 4763 | ID=Msa1459910-mRNA-1:exon:22481;Parent=Msa1459910-mRNA-1 |
| tig0040546 | exon | 5426 | 6766 | 5426 | ID=Msa1459910-mRNA-1:exon:22482;Parent=Msa1459910-mRNA-1 |
| tig0040546 | five_prime_UTR | 3916 | 4232 | 3916 | ID=Msa1459910-mRNA-1:five_prime_utr;Parent=Msa1459910-mRNA-1 |
| tig0040546 | five_prime_UTR | 4347 | 4468 | 4347 | ID=Msa1459910-mRNA-1:five_prime_utr;Parent=Msa1459910-mRNA-1 |
| tig0040546 | five_prime_UTR | 4763 | 4767 | 4763 | ID=Msa1459910-mRNA-1:five_prime_utr;Parent=Msa1459910-mRNA-1 |
| tig0040546 | CDS | 4768 | 4989 | 4768 | ID=Msa1459910-mRNA-1:cds;Parent=Msa1459910-mRNA-1 |
| tig0040546 | CDS | 5426 | 6682 | 5426 | ID=Msa1459910-mRNA-1:cds;Parent=Msa1459910-mRNA-1 |
| tig0040546 | three_prime_UTR | 6683 | 6766 | 6683 | ID=Msa1459910-mRNA-1:three_prime_utr;Parent=Msa1459910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
