Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1264830 | XP_013458562.1 | 99.388 | 327 | 2 | 0 | 1 | 327 | 1 | 327 | 0.0 | 659 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1264830 | sp|P26360|ATPG3_IPOBA | 81.707 | 328 | 57 | 3 | 1 | 327 | 1 | 326 | 0.0 | 549 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0108750 | Msa1264830 | 0.839329 | 1.691674e-57 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1264830 | MtrunA17_Chr4g0073341 | 99.388 | 327 | 2 | 0 | 1 | 327 | 1 | 327 | 0.0 | 659 |
Msa1264830 | MtrunA17_Chr2g0288451 | 28.455 | 369 | 200 | 10 | 17 | 325 | 9 | 373 | 1.96e-26 | 107 |
Msa1264830 | MtrunA17_Chr3g0099081 | 28.261 | 322 | 179 | 10 | 52 | 325 | 30 | 347 | 1.11e-25 | 105 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1264830 | AT2G33040.1 | 78.769 | 325 | 65 | 3 | 1 | 325 | 1 | 321 | 0.0 | 522 |
Msa1264830 | AT4G04640.1 | 29.296 | 355 | 191 | 9 | 15 | 324 | 32 | 371 | 1.62e-30 | 119 |
Msa1264830 | AT1G15700.1 | 28.000 | 325 | 176 | 9 | 52 | 325 | 66 | 383 | 1.41e-25 | 105 |
Find 94 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTGGTTGACCAGATATTTC+TGG | 0.183476 | 8_2:-68409146 | Msa1264830:three_prime_UTR |
AAACGATTATTATTATAAAA+AGG | 0.224110 | 8_2:+68409195 | None:intergenic |
CAAAGGCCAATAGTTATTAT+TGG | 0.237572 | 8_2:+68409054 | None:intergenic |
CGTACTATTTCCACTCAAAT+TGG | 0.238116 | 8_2:-68414343 | Msa1264830:intron |
ACATACTTTGTCTCTTTATC+AGG | 0.264351 | 8_2:+68413230 | None:intergenic |
GCCTTGAGCAAGTTGAATTC+TGG | 0.280287 | 8_2:-68413543 | Msa1264830:intron |
AACTAGCCTTGGGGATTTCT+TGG | 0.282149 | 8_2:-68409164 | Msa1264830:three_prime_UTR |
TACAGAGATCAATCTTCTAT+TGG | 0.285686 | 8_2:-68414373 | Msa1264830:intron |
TTATTTCCAATAATAACTAT+TGG | 0.339761 | 8_2:-68409060 | Msa1264830:three_prime_UTR |
AGAGACAAAGTATGTCATAT+TGG | 0.347992 | 8_2:-68413222 | Msa1264830:CDS |
TTGTACGTACGCAAGAAAAC+TGG | 0.369183 | 8_2:+68412094 | None:intergenic |
GTCTGACCCTCACTTATAAT+AGG | 0.386053 | 8_2:-68409540 | Msa1264830:intron |
GAGACAAAGTATGTCATATT+GGG | 0.404543 | 8_2:-68413221 | Msa1264830:CDS |
TTATAATAATAATCGTTTCA+AGG | 0.413740 | 8_2:-68409190 | Msa1264830:three_prime_UTR |
TTGTAGGTGTTATTTGGGCA+AGG | 0.419437 | 8_2:+68408980 | None:intergenic |
CTGAAAATTCACGTGGTTTG+TGG | 0.419923 | 8_2:-68414098 | Msa1264830:CDS |
AAAACAATTCCAGAAATATC+TGG | 0.429809 | 8_2:+68409137 | None:intergenic |
GACAGCTCTAGCAGGAATGC+TGG | 0.431443 | 8_2:-68409577 | Msa1264830:CDS |
TTCAAGGCGAAACTAGCCTT+GGG | 0.435586 | 8_2:-68409174 | Msa1264830:three_prime_UTR |
TGGAGGAAGTCTCGGTGAAC+TGG | 0.443236 | 8_2:-68412178 | Msa1264830:CDS |
CCTTGCTCCTTGCTCACTGC+AGG | 0.446628 | 8_2:+68409612 | None:intergenic |
CAGCCATTTACCGCTCTTCT+CGG | 0.447516 | 8_2:-68414075 | Msa1264830:CDS |
GAATTGATTGAGATTATCTC+TGG | 0.457104 | 8_2:-68409342 | Msa1264830:CDS |
TGTAGGTGTTATTTGGGCAA+GGG | 0.459087 | 8_2:+68408981 | None:intergenic |
TTGTTTGTGCAGTGAGAAAT+CGG | 0.465696 | 8_2:-68414206 | Msa1264830:intron |
ATGACGATATTGAGATATAT+CGG | 0.467507 | 8_2:-68409263 | Msa1264830:three_prime_UTR |
TCTTCAGACAAAGGTCTTTG+TGG | 0.469713 | 8_2:-68413600 | Msa1264830:CDS |
GATCGGAGAGTGGTGTTGAT+TGG | 0.474940 | 8_2:+68414493 | None:intergenic |
AGAGATCAATCTTCTATTGG+AGG | 0.475794 | 8_2:-68414370 | Msa1264830:CDS |
AGAGATAATCTCAATCAATT+CGG | 0.476977 | 8_2:+68409344 | None:intergenic |
AAGACCTTTGTCTGAAGAAA+CGG | 0.482952 | 8_2:+68413605 | None:intergenic |
CTGGATTCGTATGAGATTGA+AGG | 0.483416 | 8_2:-68412159 | Msa1264830:CDS |
CGATATTGAGATATATCGGT+TGG | 0.487663 | 8_2:-68409259 | Msa1264830:three_prime_UTR |
CTCGAACTGTTATTTACTTG+TGG | 0.488869 | 8_2:-68409028 | Msa1264830:three_prime_UTR |
CCACGTCTGTCAAGATAAGC+AGG | 0.495862 | 8_2:-68413566 | Msa1264830:CDS |
ACAGCTCTAGCAGGAATGCT+GGG | 0.501839 | 8_2:-68409576 | Msa1264830:CDS |
AGCAACCATCTTCATAGCCT+TGG | 0.502533 | 8_2:+68414152 | None:intergenic |
CATGTAGATTGTTGAAAGAG+AGG | 0.506420 | 8_2:-68412208 | Msa1264830:intron |
GTTGAAAGAGAGGCTGAAGC+TGG | 0.508534 | 8_2:-68412198 | Msa1264830:CDS |
CGGAGAGTGGTGTTGATTGG+TGG | 0.512550 | 8_2:+68414496 | None:intergenic |
TTTCAAGGCGAAACTAGCCT+TGG | 0.515698 | 8_2:-68409175 | Msa1264830:three_prime_UTR |
AACTACGTGCTGTTCAAACC+AGG | 0.516036 | 8_2:-68414122 | Msa1264830:CDS |
GATGAGAGGAGATCGGAGAG+TGG | 0.516462 | 8_2:+68414483 | None:intergenic |
CCGACGCGAAGGGAAGCGTT+TGG | 0.523663 | 8_2:-68414539 | Msa1264830:CDS |
CTGCCATGGACAGCTCTAGC+AGG | 0.525991 | 8_2:-68409585 | Msa1264830:CDS |
GCTGAAGCTGGAGGAAGTCT+CGG | 0.540570 | 8_2:-68412186 | Msa1264830:CDS |
TCTGGAGCATCAGCACTGAC+AGG | 0.540615 | 8_2:-68409324 | Msa1264830:CDS |
GCTGCTGCACTCCGACGCGA+AGG | 0.542082 | 8_2:-68414550 | Msa1264830:CDS |
AATTACCAAGGCTATGAAGA+TGG | 0.547208 | 8_2:-68414157 | Msa1264830:CDS |
TGGATTCGTATGAGATTGAA+GGG | 0.556021 | 8_2:-68412158 | Msa1264830:CDS |
TCAGACAAAGGTCTTTGTGG+TGG | 0.558554 | 8_2:-68413597 | Msa1264830:CDS |
GTATGTCATATTGGGAGAGA+AGG | 0.558989 | 8_2:-68413213 | Msa1264830:CDS |
AATGAAAGTACCAATTTGAG+TGG | 0.565521 | 8_2:+68414333 | None:intergenic |
GAGAATGCCTGCAGTGAGCA+AGG | 0.566041 | 8_2:-68409619 | Msa1264830:CDS |
AAAGATACCTATTATAAGTG+AGG | 0.568709 | 8_2:+68409533 | None:intergenic |
CTGCTGCACTCCGACGCGAA+GGG | 0.583053 | 8_2:-68414549 | Msa1264830:CDS |
AAGATACCTATTATAAGTGA+GGG | 0.587593 | 8_2:+68409534 | None:intergenic |
GGTCATGTTCAATGCGGTGT+TGG | 0.590854 | 8_2:-68409641 | Msa1264830:CDS |
CGTTGTACAATTTCTACCAA+CGG | 0.590879 | 8_2:-68412452 | Msa1264830:CDS |
AGGAGCAAGGATGTCTGCCA+TGG | 0.594950 | 8_2:-68409599 | Msa1264830:CDS |
AGGGAGAGATGAGAGGAGAT+CGG | 0.599654 | 8_2:+68414476 | None:intergenic |
ACGAAAGAATCTCAAATCGA+TGG | 0.600840 | 8_2:-68414578 | Msa1264830:exon |
GAATCTCAAATCGATGGCGA+TGG | 0.602234 | 8_2:-68414572 | Msa1264830:exon |
AATAACAGTTCGAGAAACAA+AGG | 0.603461 | 8_2:+68409037 | None:intergenic |
GATAATCTCAATCAATTCGG+TGG | 0.603991 | 8_2:+68409347 | None:intergenic |
GAATCCTCTGAATTATACTC+AGG | 0.606536 | 8_2:-68413126 | Msa1264830:intron |
TGTAGCATCGCCGAGAAGAG+CGG | 0.607988 | 8_2:+68414065 | None:intergenic |
ATTACCGTTTCTTCAGACAA+AGG | 0.610426 | 8_2:-68413609 | Msa1264830:CDS |
ACGAACAAGGGAGAGATGAG+AGG | 0.612203 | 8_2:+68414469 | None:intergenic |
ATTCCTGCTAGAGCTGTCCA+TGG | 0.613830 | 8_2:+68409582 | None:intergenic |
GAAAGAGAGGCTGAAGCTGG+AGG | 0.621120 | 8_2:-68412195 | Msa1264830:CDS |
CCTGCAGTGAGCAAGGAGCA+AGG | 0.624108 | 8_2:-68409612 | Msa1264830:CDS |
CTAACCTGAGTATAATTCAG+AGG | 0.633689 | 8_2:+68413122 | None:intergenic |
TCGCTGAGAGAGAGAAAGAG+AGG | 0.639910 | 8_2:+68414604 | None:intergenic |
CAGCTCTAGCAGGAATGCTG+GGG | 0.652373 | 8_2:-68409575 | Msa1264830:CDS |
CATATTGGGAGAGAAGGCTA+AGG | 0.655816 | 8_2:-68413207 | Msa1264830:CDS |
CCTGCTTATCTTGACAGACG+TGG | 0.656536 | 8_2:+68413566 | None:intergenic |
ACCAGAATTCAACTTGCTCA+AGG | 0.662579 | 8_2:+68413542 | None:intergenic |
TACGCAAGAAAACTGGAACT+CGG | 0.672354 | 8_2:+68412101 | None:intergenic |
CACGTCTGTCAAGATAAGCA+GGG | 0.673248 | 8_2:-68413565 | Msa1264830:CDS |
GAATATTCAGAAAATTACCA+AGG | 0.679225 | 8_2:-68414169 | Msa1264830:CDS |
CCAAACGCTTCCCTTCGCGT+CGG | 0.680197 | 8_2:+68414539 | None:intergenic |
ACCAGGGCTGAAAATTCACG+TGG | 0.682606 | 8_2:-68414105 | Msa1264830:CDS |
TCAAGGCGAAACTAGCCTTG+GGG | 0.682760 | 8_2:-68409173 | Msa1264830:three_prime_UTR |
GATAGTATAGTTGACACCGT+TGG | 0.683787 | 8_2:+68412436 | None:intergenic |
GGTGGTTGAGAAGACATGAG+AGG | 0.688310 | 8_2:+68414514 | None:intergenic |
GGATTCGTATGAGATTGAAG+GGG | 0.696951 | 8_2:-68412157 | Msa1264830:CDS |
ACTACGTGCTGTTCAAACCA+GGG | 0.699734 | 8_2:-68414121 | Msa1264830:CDS |
GATTCGTATGAGATTGAAGG+GGG | 0.707101 | 8_2:-68412156 | Msa1264830:CDS |
CGTTGGTAGAAATTGTACAA+CGG | 0.712891 | 8_2:+68412453 | None:intergenic |
GGTCAACCAAGAAATCCCCA+AGG | 0.725747 | 8_2:+68409158 | None:intergenic |
TATATAGGTCATGTTCAATG+CGG | 0.738383 | 8_2:-68409647 | Msa1264830:intron |
AATAGATGAAAGTACCTCGG+GGG | 0.741176 | 8_2:+68412414 | None:intergenic |
ACGTGGAGTATGATGCACTG+AGG | 0.781586 | 8_2:-68412498 | Msa1264830:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAAAAAATAAAAAATTA+GGG | + | chr8_2:68409421-68409440 | None:intergenic | 0.0% |
!! | TACGAATATAATTAATATAT+AGG | + | chr8_2:68413369-68413388 | None:intergenic | 10.0% |
!! | ACTAATTATGAATATAATAA+AGG | - | chr8_2:68413501-68413520 | Msa1264830:intron | 10.0% |
!! | AAACGATTATTATTATAAAA+AGG | + | chr8_2:68414524-68414543 | None:intergenic | 10.0% |
!!! | ATTAAATTTTGATTGTGTTA+TGG | - | chr8_2:68409477-68409496 | Msa1264830:intron | 15.0% |
!! | CAAATTGTAACAAAATAAAA+AGG | + | chr8_2:68409700-68409719 | None:intergenic | 15.0% |
!!! | AAATATTTTGAGATAAAATC+CGG | - | chr8_2:68410425-68410444 | Msa1264830:intron | 15.0% |
!!! | ATTCCTTAACAATTTAATTT+AGG | + | chr8_2:68410673-68410692 | None:intergenic | 15.0% |
!! | TTAAGGAATATTGAAAAATA+TGG | - | chr8_2:68410684-68410703 | Msa1264830:intron | 15.0% |
!!! | ATGTTTAAATAGCTTATTTT+GGG | + | chr8_2:68411043-68411062 | None:intergenic | 15.0% |
!!! | AATGTTTAAATAGCTTATTT+TGG | + | chr8_2:68411044-68411063 | None:intergenic | 15.0% |
!! | AACAATTAAAACTAAACAAT+GGG | + | chr8_2:68411157-68411176 | None:intergenic | 15.0% |
!! | AAATTATATACTACAACATT+CGG | - | chr8_2:68412741-68412760 | Msa1264830:intron | 15.0% |
!! | TATACTTTATTGTTGTATAT+AGG | - | chr8_2:68414054-68414073 | Msa1264830:intron | 15.0% |
!! | TTATAATAATAATCGTTTCA+AGG | - | chr8_2:68414526-68414545 | Msa1264830:CDS | 15.0% |
!! | TTATTTCCAATAATAACTAT+TGG | - | chr8_2:68414656-68414675 | Msa1264830:five_prime_UTR | 15.0% |
!!! | TCTTAGATTTTTGATGAATT+AGG | - | chr8_2:68409445-68409464 | Msa1264830:intron | 20.0% |
!! | TTGTATGATTGTGTAATAAT+TGG | - | chr8_2:68409744-68409763 | Msa1264830:intron | 20.0% |
!! | AGTCCTAAATTAAATTGTTA+AGG | - | chr8_2:68410667-68410686 | Msa1264830:intron | 20.0% |
!! | AGATATATATGTAAAACACA+AGG | + | chr8_2:68410752-68410771 | None:intergenic | 20.0% |
!! | TAGAAAACAAAGTTTATAAG+TGG | - | chr8_2:68410771-68410790 | Msa1264830:intron | 20.0% |
!! | TCTTTATAACAAACTAATTC+AGG | + | chr8_2:68410798-68410817 | None:intergenic | 20.0% |
!! | TCATTTATTCAACAACAAAA+AGG | + | chr8_2:68410936-68410955 | None:intergenic | 20.0% |
!!! | TGTTTAAATAGCTTATTTTG+GGG | + | chr8_2:68411042-68411061 | None:intergenic | 20.0% |
!! | CAACAATTAAAACTAAACAA+TGG | + | chr8_2:68411158-68411177 | None:intergenic | 20.0% |
!!! | GTTTTAATTGTTGTATTTTC+AGG | - | chr8_2:68411165-68411184 | Msa1264830:intron | 20.0% |
!!! | TATTGCAAAATAAGTTTTCA+TGG | + | chr8_2:68411431-68411450 | None:intergenic | 20.0% |
!!! | AAAACTTATTTTGCAATATC+AGG | - | chr8_2:68411433-68411452 | Msa1264830:intron | 20.0% |
!! | TAGAATATAAAATGCTATCT+GGG | - | chr8_2:68411828-68411847 | Msa1264830:intron | 20.0% |
!! | TTAAGATGATTATGATTTCA+TGG | - | chr8_2:68412024-68412043 | Msa1264830:intron | 20.0% |
!!! | TTTTGATCAAAATAGTAGAA+GGG | - | chr8_2:68412388-68412407 | Msa1264830:intron | 20.0% |
!! | AAGTATAAAAGAAACGAAAA+AGG | + | chr8_2:68413004-68413023 | None:intergenic | 20.0% |
!! | CAATTGCAATAAAATTGATA+TGG | + | chr8_2:68413346-68413365 | None:intergenic | 20.0% |
!! | TTTATCATTATAAACTTGAC+AGG | + | chr8_2:68413729-68413748 | None:intergenic | 20.0% |
!! | ATAAGTATAATTTGAAAGAG+AGG | + | chr8_2:68414029-68414048 | None:intergenic | 20.0% |
!!! | TTTAGACAAAATTTTTGTTC+TGG | - | chr8_2:68414244-68414263 | Msa1264830:intron | 20.0% |
! | AGAACTGTATTAAAAAGCTA+GGG | - | chr8_2:68409087-68409106 | Msa1264830:three_prime_UTR | 25.0% |
! | AATGAAGAGGTTAATTGAAA+AGG | + | chr8_2:68409313-68409332 | None:intergenic | 25.0% |
! | GTAATAGAAATGAAATGAAG+AGG | + | chr8_2:68409326-68409345 | None:intergenic | 25.0% |
! | GAATATTCAGAAAATTACCA+AGG | - | chr8_2:68409547-68409566 | Msa1264830:CDS | 25.0% |
! | TCCTATTCATCAAAAATCAA+GGG | + | chr8_2:68409970-68409989 | None:intergenic | 25.0% |
! | TTCCTATTCATCAAAAATCA+AGG | + | chr8_2:68409971-68409990 | None:intergenic | 25.0% |
! | AACGCCTAAAAGAATATAAA+CGG | + | chr8_2:68410066-68410085 | None:intergenic | 25.0% |
!! | TGTGAAATACTGTTTTCATT+TGG | - | chr8_2:68410354-68410373 | Msa1264830:intron | 25.0% |
! | CTAGATATATGTAAAACACA+AGG | + | chr8_2:68410636-68410655 | None:intergenic | 25.0% |
!! | TTTTCTGACTGAATATAATG+TGG | - | chr8_2:68410864-68410883 | Msa1264830:intron | 25.0% |
! | AGCTATTTAAACATTCATTG+TGG | - | chr8_2:68411049-68411068 | Msa1264830:intron | 25.0% |
! | GCTATTTAAACATTCATTGT+GGG | - | chr8_2:68411050-68411069 | Msa1264830:intron | 25.0% |
!!! | TTTAATAGATGAAAGTACCT+CGG | + | chr8_2:68411308-68411327 | None:intergenic | 25.0% |
! | CTAATTCAAATTGACGAAAT+GGG | + | chr8_2:68411694-68411713 | None:intergenic | 25.0% |
! | ACTAATTCAAATTGACGAAA+TGG | + | chr8_2:68411695-68411714 | None:intergenic | 25.0% |
! | GTAGAATATAAAATGCTATC+TGG | - | chr8_2:68411827-68411846 | Msa1264830:intron | 25.0% |
! | AAAATTTGGTATAGAGAGTA+AGG | + | chr8_2:68411889-68411908 | None:intergenic | 25.0% |
!!! | AAACTTGTTACAAAGTCAAT+AGG | + | chr8_2:68411991-68412010 | None:intergenic | 25.0% |
! | ATCATAATCATCTTAATGCA+AGG | + | chr8_2:68412020-68412039 | None:intergenic | 25.0% |
! | TGATATCACTTTACTTTCAA+AGG | - | chr8_2:68412085-68412104 | Msa1264830:intron | 25.0% |
!! | AAGATATTTTCAAAACCACT+AGG | + | chr8_2:68412159-68412178 | None:intergenic | 25.0% |
! | TAACTAAGTATAAACAGGTA+CGG | + | chr8_2:68412305-68412324 | None:intergenic | 25.0% |
! | CGAAATAACTAAGTATAAAC+AGG | + | chr8_2:68412310-68412329 | None:intergenic | 25.0% |
!! | GATCAAAAGCAAGATAATTT+TGG | + | chr8_2:68412376-68412395 | None:intergenic | 25.0% |
!! | CTTTTGATCAAAATAGTAGA+AGG | - | chr8_2:68412387-68412406 | Msa1264830:intron | 25.0% |
!!! | ATTTTAAAAAATGAAGGTCC+AGG | + | chr8_2:68412507-68412526 | None:intergenic | 25.0% |
!!! | CGGCAAATTTTAAAAAATGA+AGG | + | chr8_2:68412513-68412532 | None:intergenic | 25.0% |
!! | TTGTAGTTAGTTGATATTGT+TGG | - | chr8_2:68412795-68412814 | Msa1264830:intron | 25.0% |
! | CCAAATAAAACTATGTAGTT+GGG | + | chr8_2:68413815-68413834 | None:intergenic | 25.0% |
! | TCCAAATAAAACTATGTAGT+TGG | + | chr8_2:68413816-68413835 | None:intergenic | 25.0% |
! | AATCAATAAGCACAATATTC+AGG | + | chr8_2:68413927-68413946 | None:intergenic | 25.0% |
! | AAGATACCTATTATAAGTGA+GGG | + | chr8_2:68414185-68414204 | None:intergenic | 25.0% |
! | AAAGATACCTATTATAAGTG+AGG | + | chr8_2:68414186-68414205 | None:intergenic | 25.0% |
! | AGAGATAATCTCAATCAATT+CGG | + | chr8_2:68414375-68414394 | None:intergenic | 25.0% |
! | ATGACGATATTGAGATATAT+CGG | - | chr8_2:68414453-68414472 | Msa1264830:intron | 25.0% |
!!! | TTGGTTTCTTTTGAAATTGT+TGG | - | chr8_2:68414476-68414495 | Msa1264830:CDS | 25.0% |
! | AAAACAATTCCAGAAATATC+TGG | + | chr8_2:68414582-68414601 | None:intergenic | 25.0% |
CAGAACTGTATTAAAAAGCT+AGG | - | chr8_2:68409086-68409105 | Msa1264830:three_prime_UTR | 30.0% | |
TACAGAGATCAATCTTCTAT+TGG | - | chr8_2:68409343-68409362 | Msa1264830:CDS | 30.0% | |
!! | AATGAAAGTACCAATTTGAG+TGG | + | chr8_2:68409386-68409405 | None:intergenic | 30.0% |
! | ACCCTTGATTTTTGATGAAT+AGG | - | chr8_2:68409966-68409985 | Msa1264830:intron | 30.0% |
! | GGTTCCGTTTATATTCTTTT+AGG | - | chr8_2:68410059-68410078 | Msa1264830:intron | 30.0% |
AAATACAACTGATGCAATTG+TGG | + | chr8_2:68410263-68410282 | None:intergenic | 30.0% | |
TTGAAATTGCAGACAATTGT+GGG | + | chr8_2:68410287-68410306 | None:intergenic | 30.0% | |
!!! | AAAGGTTCTAAATTTTGTCG+GGG | + | chr8_2:68410330-68410349 | None:intergenic | 30.0% |
!!! | CAAAGGTTCTAAATTTTGTC+GGG | + | chr8_2:68410331-68410350 | None:intergenic | 30.0% |
!!! | GCAAAGGTTCTAAATTTTGT+CGG | + | chr8_2:68410332-68410351 | None:intergenic | 30.0% |
AACAGTATTTCACATTGCAA+AGG | + | chr8_2:68410348-68410367 | None:intergenic | 30.0% | |
! | TTTGAGATAAAATCCGGTAA+TGG | - | chr8_2:68410431-68410450 | Msa1264830:intron | 30.0% |
! | ATAAAATCCGGTAATGGTAA+TGG | - | chr8_2:68410437-68410456 | Msa1264830:intron | 30.0% |
ACATACTTTGTCTCTTTATC+AGG | + | chr8_2:68410489-68410508 | None:intergenic | 30.0% | |
AGAGACAAAGTATGTCATAT+TGG | - | chr8_2:68410494-68410513 | Msa1264830:intron | 30.0% | |
GAGACAAAGTATGTCATATT+GGG | - | chr8_2:68410495-68410514 | Msa1264830:intron | 30.0% | |
AATATGGACATTGCTCTTAA+CGG | - | chr8_2:68410700-68410719 | Msa1264830:intron | 30.0% | |
! | AAAAAGGCTTTAATGTCACT+GGG | + | chr8_2:68410920-68410939 | None:intergenic | 30.0% |
CTAAACAATGGGTATATACT+CGG | + | chr8_2:68411146-68411165 | None:intergenic | 30.0% | |
!! | TTAATAGATGAAAGTACCTC+GGG | + | chr8_2:68411307-68411326 | None:intergenic | 30.0% |
GGGAAAAACTTCATTACAAT+AGG | + | chr8_2:68411346-68411365 | None:intergenic | 30.0% | |
! | ATTGTAATGAAGTTTTTCCC+AGG | - | chr8_2:68411346-68411365 | Msa1264830:intron | 30.0% |
TTGACAATATTTCATGTCAG+GGG | + | chr8_2:68411373-68411392 | None:intergenic | 30.0% | |
CTTGACAATATTTCATGTCA+GGG | + | chr8_2:68411374-68411393 | None:intergenic | 30.0% | |
ACTTGACAATATTTCATGTC+AGG | + | chr8_2:68411375-68411394 | None:intergenic | 30.0% | |
ATTCAAAATATGACAGTGCA+AGG | - | chr8_2:68411746-68411765 | Msa1264830:intron | 30.0% | |
TAGAGGAAAGTGAGAAAATT+TGG | + | chr8_2:68411903-68411922 | None:intergenic | 30.0% | |
GATGATTATGATTTCATGGA+TGG | - | chr8_2:68412028-68412047 | Msa1264830:intron | 30.0% | |
GAGTATATATGAACTCTGAA+TGG | + | chr8_2:68412694-68412713 | None:intergenic | 30.0% | |
GTTAGATAACTAGTTAGAGA+CGG | - | chr8_2:68412817-68412836 | Msa1264830:intron | 30.0% | |
TTAGATAACTAGTTAGAGAC+GGG | - | chr8_2:68412818-68412837 | Msa1264830:intron | 30.0% | |
ATTAGAGGATGCATACAATA+TGG | - | chr8_2:68412843-68412862 | Msa1264830:intron | 30.0% | |
TTAGAGGATGCATACAATAT+GGG | - | chr8_2:68412844-68412863 | Msa1264830:intron | 30.0% | |
ACAATATGGGTGAAGTAATA+AGG | - | chr8_2:68412857-68412876 | Msa1264830:intron | 30.0% | |
CAATATGGGTGAAGTAATAA+GGG | - | chr8_2:68412858-68412877 | Msa1264830:intron | 30.0% | |
AATATGGGTGAAGTAATAAG+GGG | - | chr8_2:68412859-68412878 | Msa1264830:intron | 30.0% | |
GAAAATATGAACAACACTTG+AGG | + | chr8_2:68412929-68412948 | None:intergenic | 30.0% | |
TTCACGAAAATTTCGTGAAA+AGG | + | chr8_2:68413223-68413242 | None:intergenic | 30.0% | |
! | TTCACGAAATTTTCGTGAAA+AGG | - | chr8_2:68413224-68413243 | Msa1264830:CDS | 30.0% |
! | AAATGGTCAGTTTTTACTTC+AGG | + | chr8_2:68413572-68413591 | None:intergenic | 30.0% |
ACTGACCATTTAATTATGAG+AGG | - | chr8_2:68413581-68413600 | Msa1264830:CDS | 30.0% | |
CTGACCATTTAATTATGAGA+GGG | - | chr8_2:68413582-68413601 | Msa1264830:CDS | 30.0% | |
!!! | CCCAACTACATAGTTTTATT+TGG | - | chr8_2:68413812-68413831 | Msa1264830:intron | 30.0% |
CTTGTTAACACAAAAGAATC+AGG | + | chr8_2:68413886-68413905 | None:intergenic | 30.0% | |
CTCAATAAAAAAGCAGCAAA+AGG | + | chr8_2:68413966-68413985 | None:intergenic | 30.0% | |
TATATAGGTCATGTTCAATG+CGG | - | chr8_2:68414069-68414088 | Msa1264830:CDS | 30.0% | |
AGATACTGATGCAATTATAC+AGG | + | chr8_2:68414275-68414294 | None:intergenic | 30.0% | |
GAATTGATTGAGATTATCTC+TGG | - | chr8_2:68414374-68414393 | Msa1264830:intron | 30.0% | |
!!! | GGAATTGTTTTTTGATGTTG+AGG | - | chr8_2:68414591-68414610 | Msa1264830:five_prime_UTR | 30.0% |
CAAAGGCCAATAGTTATTAT+TGG | + | chr8_2:68414665-68414684 | None:intergenic | 30.0% | |
AATAACAGTTCGAGAAACAA+AGG | + | chr8_2:68414682-68414701 | None:intergenic | 30.0% | |
ACGAAAGAATCTCAAATCGA+TGG | - | chr8_2:68409138-68409157 | Msa1264830:three_prime_UTR | 35.0% | |
AGAGATCAATCTTCTATTGG+AGG | - | chr8_2:68409346-68409365 | Msa1264830:CDS | 35.0% | |
CGTACTATTTCCACTCAAAT+TGG | - | chr8_2:68409373-68409392 | Msa1264830:intron | 35.0% | |
TTGTTTGTGCAGTGAGAAAT+CGG | - | chr8_2:68409510-68409529 | Msa1264830:intron | 35.0% | |
AATTACCAAGGCTATGAAGA+TGG | - | chr8_2:68409559-68409578 | Msa1264830:CDS | 35.0% | |
GACTGAAAACAAAGACTGAA+TGG | - | chr8_2:68409768-68409787 | Msa1264830:intron | 35.0% | |
TTGATTGTAACCACACATGT+CGG | - | chr8_2:68409864-68409883 | Msa1264830:intron | 35.0% | |
GAATGTGTGTCTAGTATTGT+TGG | + | chr8_2:68409915-68409934 | None:intergenic | 35.0% | |
! | ACACATTCAATCAGAAGTGT+GGG | - | chr8_2:68409927-68409946 | Msa1264830:intron | 35.0% |
CATCAAAAATCAAGGGTGAA+GGG | + | chr8_2:68409963-68409982 | None:intergenic | 35.0% | |
TCATCAAAAATCAAGGGTGA+AGG | + | chr8_2:68409964-68409983 | None:intergenic | 35.0% | |
ATGAATAGGAATTGTCCACA+CGG | - | chr8_2:68409980-68409999 | Msa1264830:intron | 35.0% | |
TTTCATGTCATTGCTCATTG+TGG | - | chr8_2:68410038-68410057 | Msa1264830:intron | 35.0% | |
ATTACCGTTTCTTCAGACAA+AGG | - | chr8_2:68410107-68410126 | Msa1264830:intron | 35.0% | |
AAGACCTTTGTCTGAAGAAA+CGG | + | chr8_2:68410114-68410133 | None:intergenic | 35.0% | |
TTGTTGTCTGTGTATTGTGA+TGG | - | chr8_2:68410209-68410228 | Msa1264830:intron | 35.0% | |
CTTGAAATTGCAGACAATTG+TGG | + | chr8_2:68410288-68410307 | None:intergenic | 35.0% | |
CACAATTGTCTGCAATTTCA+AGG | - | chr8_2:68410286-68410305 | Msa1264830:intron | 35.0% | |
! | TTTGGAACCATTACCATTAC+CGG | + | chr8_2:68410447-68410466 | None:intergenic | 35.0% |
CCTATAGTAGCAAATAGGTT+TGG | + | chr8_2:68410465-68410484 | None:intergenic | 35.0% | |
! | CCAAACCTATTTGCTACTAT+AGG | - | chr8_2:68410462-68410481 | Msa1264830:intron | 35.0% |
GAATCCTCTGAATTATACTC+AGG | - | chr8_2:68410590-68410609 | Msa1264830:intron | 35.0% | |
CTAACCTGAGTATAATTCAG+AGG | + | chr8_2:68410597-68410616 | None:intergenic | 35.0% | |
AATATGAACGTCACTCTAAC+TGG | - | chr8_2:68410826-68410845 | Msa1264830:intron | 35.0% | |
TCTGACTGAATATAATGTGG+TGG | - | chr8_2:68410867-68410886 | Msa1264830:intron | 35.0% | |
! | CAAAAAGGCTTTAATGTCAC+TGG | + | chr8_2:68410921-68410940 | None:intergenic | 35.0% |
TTGGGGAAAAATGCTTTCTT+TGG | + | chr8_2:68411025-68411044 | None:intergenic | 35.0% | |
!!! | GTATTTTCAGGTTTCTGTCT+TGG | - | chr8_2:68411177-68411196 | Msa1264830:intron | 35.0% |
! | TGATGACATTCTGAAAAACG+TGG | - | chr8_2:68411201-68411220 | Msa1264830:intron | 35.0% |
! | CGTTGGTAGAAATTGTACAA+CGG | + | chr8_2:68411266-68411285 | None:intergenic | 35.0% |
CGTTGTACAATTTCTACCAA+CGG | - | chr8_2:68411264-68411283 | Msa1264830:intron | 35.0% | |
!! | TAATAGATGAAAGTACCTCG+GGG | + | chr8_2:68411306-68411325 | None:intergenic | 35.0% |
TATTGTCAAGTTTCGACGTT+TGG | - | chr8_2:68411384-68411403 | Msa1264830:intron | 35.0% | |
TTACATCACACCATTGAAAC+AGG | + | chr8_2:68411479-68411498 | None:intergenic | 35.0% | |
CATGTAGATTGTTGAAAGAG+AGG | - | chr8_2:68411508-68411527 | Msa1264830:intron | 35.0% | |
TGGATTCGTATGAGATTGAA+GGG | - | chr8_2:68411558-68411577 | Msa1264830:intron | 35.0% | |
! | TATAAAATGCTATCTGGGAC+CGG | - | chr8_2:68411833-68411852 | Msa1264830:intron | 35.0% |
! | GCTTAATTTGATCCCTGTTA+TGG | + | chr8_2:68411867-68411886 | None:intergenic | 35.0% |
TTATTTCCAAATAGCCAGGT+AGG | + | chr8_2:68411934-68411953 | None:intergenic | 35.0% | |
GGAATTATTTCCAAATAGCC+AGG | + | chr8_2:68411938-68411957 | None:intergenic | 35.0% | |
GTTACAAAGTCAATAGGAAG+CGG | + | chr8_2:68411985-68412004 | None:intergenic | 35.0% | |
!! | AAACTGCTCTAGAATGTTCT+TGG | + | chr8_2:68412065-68412084 | None:intergenic | 35.0% |
!!! | CATGATTTGTTGTGACCTTT+TGG | - | chr8_2:68412196-68412215 | Msa1264830:CDS | 35.0% |
AAGTATAAACAGGTACGGTT+CGG | + | chr8_2:68412300-68412319 | None:intergenic | 35.0% | |
! | CTTAGTTATTTCGTCGTAGT+TGG | - | chr8_2:68412317-68412336 | Msa1264830:intron | 35.0% |
! | ATGTTTTATACCAACGTACC+TGG | - | chr8_2:68412486-68412505 | Msa1264830:CDS | 35.0% |
TATGAACTCTGAATGGAATG+CGG | + | chr8_2:68412687-68412706 | None:intergenic | 35.0% | |
CTCACATATAAGCTGTAAAG+TGG | - | chr8_2:68412711-68412730 | Msa1264830:intron | 35.0% | |
ATACTACAACATTCGGTAAC+TGG | - | chr8_2:68412748-68412767 | Msa1264830:intron | 35.0% | |
GTCTTCTAAACCTTTGGTAT+AGG | - | chr8_2:68413292-68413311 | Msa1264830:intron | 35.0% | |
AGGATTTGAACCTATACCAA+AGG | + | chr8_2:68413305-68413324 | None:intergenic | 35.0% | |
GGTATAGGTTCAAATCCTAT+TGG | - | chr8_2:68413307-68413326 | Msa1264830:intron | 35.0% | |
GGAAAAAATTTGCGTCCAAT+AGG | + | chr8_2:68413325-68413344 | None:intergenic | 35.0% | |
CAAGCCCTCTCATAATTAAA+TGG | + | chr8_2:68413589-68413608 | None:intergenic | 35.0% | |
GAAGAAAAGAAACACATCAC+TGG | - | chr8_2:68413643-68413662 | Msa1264830:intron | 35.0% | |
TAAACACCTCTTATACTGCA+GGG | - | chr8_2:68413666-68413685 | Msa1264830:intron | 35.0% | |
AAAGAATCAGGAACAAGGTT+GGG | + | chr8_2:68413874-68413893 | None:intergenic | 35.0% | |
AAAAGAATCAGGAACAAGGT+TGG | + | chr8_2:68413875-68413894 | None:intergenic | 35.0% | |
ACACAAAAGAATCAGGAACA+AGG | + | chr8_2:68413879-68413898 | None:intergenic | 35.0% | |
TTGAGAACTTTGACGTTTGA+AGG | - | chr8_2:68413998-68414017 | Msa1264830:intron | 35.0% | |
ACTGATGCAATTATACAGGA+TGG | + | chr8_2:68414271-68414290 | None:intergenic | 35.0% | |
! | AGACTAGTCAGTGAAATCAT+AGG | + | chr8_2:68414313-68414332 | None:intergenic | 35.0% |
GATAATCTCAATCAATTCGG+TGG | + | chr8_2:68414372-68414391 | None:intergenic | 35.0% | |
CGATATTGAGATATATCGGT+TGG | - | chr8_2:68414457-68414476 | Msa1264830:intron | 35.0% | |
! | CTCGAACTGTTATTTACTTG+TGG | - | chr8_2:68414688-68414707 | Msa1264830:five_prime_UTR | 35.0% |
CTGAAAATTCACGTGGTTTG+TGG | - | chr8_2:68409618-68409637 | Msa1264830:CDS | 40.0% | |
GTCAATGTGTTTGTGTGTGT+CGG | + | chr8_2:68409813-68409832 | None:intergenic | 40.0% | |
CACACATTCAATCAGAAGTG+TGG | - | chr8_2:68409926-68409945 | Msa1264830:intron | 40.0% | |
ACAAATTAGTATGCACCGTG+TGG | + | chr8_2:68409998-68410017 | None:intergenic | 40.0% | |
TCTTCAGACAAAGGTCTTTG+TGG | - | chr8_2:68410116-68410135 | Msa1264830:intron | 40.0% | |
! | ACCAGAATTCAACTTGCTCA+AGG | + | chr8_2:68410177-68410196 | None:intergenic | 40.0% |
AACTGATGCAATTGTGGATG+TGG | + | chr8_2:68410257-68410276 | None:intergenic | 40.0% | |
CAGGTCCTATAGTAGCAAAT+AGG | + | chr8_2:68410470-68410489 | None:intergenic | 40.0% | |
GTATGTCATATTGGGAGAGA+AGG | - | chr8_2:68410503-68410522 | Msa1264830:intron | 40.0% | |
! | AAACCTGTTCAGCTTTTGTG+AGG | - | chr8_2:68410962-68410981 | Msa1264830:intron | 40.0% |
TTTCCTCACAAAAGCTGAAC+AGG | + | chr8_2:68410968-68410987 | None:intergenic | 40.0% | |
! | TGCTTTCTTTGGCAGCTTTT+GGG | + | chr8_2:68411014-68411033 | None:intergenic | 40.0% |
! | ATGCTTTCTTTGGCAGCTTT+TGG | + | chr8_2:68411015-68411034 | None:intergenic | 40.0% |
GATAGTATAGTTGACACCGT+TGG | + | chr8_2:68411283-68411302 | None:intergenic | 40.0% | |
!! | AATAGATGAAAGTACCTCGG+GGG | + | chr8_2:68411305-68411324 | None:intergenic | 40.0% |
!! | GTGCTTTTTGCCTGTTTCAA+TGG | - | chr8_2:68411466-68411485 | Msa1264830:intron | 40.0% |
CTGGATTCGTATGAGATTGA+AGG | - | chr8_2:68411557-68411576 | Msa1264830:intron | 40.0% | |
GGATTCGTATGAGATTGAAG+GGG | - | chr8_2:68411559-68411578 | Msa1264830:intron | 40.0% | |
GATTCGTATGAGATTGAAGG+GGG | - | chr8_2:68411560-68411579 | Msa1264830:intron | 40.0% | |
TACGCAAGAAAACTGGAACT+CGG | + | chr8_2:68411618-68411637 | None:intergenic | 40.0% | |
TTGTACGTACGCAAGAAAAC+TGG | + | chr8_2:68411625-68411644 | None:intergenic | 40.0% | |
AGTACACAACGAAGTTTGTC+AGG | + | chr8_2:68411660-68411679 | None:intergenic | 40.0% | |
TTAGTCTAATTGCCGTACGT+AGG | - | chr8_2:68411710-68411729 | Msa1264830:intron | 40.0% | |
!! | TGATTCTGAAGTCCTACGTA+CGG | + | chr8_2:68411725-68411744 | None:intergenic | 40.0% |
! | ATAAAATGCTATCTGGGACC+GGG | - | chr8_2:68411834-68411853 | Msa1264830:intron | 40.0% |
! | ACTTTCTCTCAGAGCATTCA+AGG | - | chr8_2:68412125-68412144 | Msa1264830:CDS | 40.0% |
TTCAAGGACATGTTACCTAG+TGG | - | chr8_2:68412141-68412160 | Msa1264830:CDS | 40.0% | |
!! | GTTGTGACCTTTTGGTTACT+AGG | - | chr8_2:68412204-68412223 | Msa1264830:CDS | 40.0% |
AGAGCTTCCTAGTAACCAAA+AGG | + | chr8_2:68412214-68412233 | None:intergenic | 40.0% | |
TTGGTGCAGCAAAAACGTAA+GGG | - | chr8_2:68412336-68412355 | Msa1264830:intron | 40.0% | |
AAATTTGCCGTATTACGCAC+CGG | - | chr8_2:68412523-68412542 | Msa1264830:CDS | 40.0% | |
TAGCTATGATGCATAGGTAC+GGG | + | chr8_2:68412575-68412594 | None:intergenic | 40.0% | |
CTAGCTATGATGCATAGGTA+CGG | + | chr8_2:68412576-68412595 | None:intergenic | 40.0% | |
TATGCATCATAGCTAGGAAG+CGG | - | chr8_2:68412580-68412599 | Msa1264830:intron | 40.0% | |
CTTCTCTTGATGCTTTCTCT+CGG | + | chr8_2:68412625-68412644 | None:intergenic | 40.0% | |
!! | GAGAGAAAGCATCAAGAGAA+GGG | - | chr8_2:68412624-68412643 | Msa1264830:intron | 40.0% |
AGTTAGAGACGGGAAATTAG+AGG | - | chr8_2:68412828-68412847 | Msa1264830:intron | 40.0% | |
!!! | AGGGGTTTTGTTCTGTAGTT+TGG | - | chr8_2:68412877-68412896 | Msa1264830:intron | 40.0% |
!!! | GGGGTTTTGTTCTGTAGTTT+GGG | - | chr8_2:68412878-68412897 | Msa1264830:intron | 40.0% |
!! | GAAAAGCGTCCATTGTCTAA+TGG | - | chr8_2:68413258-68413277 | Msa1264830:intron | 40.0% |
CTGTCCTATCCATTAGACAA+TGG | + | chr8_2:68413270-68413289 | None:intergenic | 40.0% | |
! | TTGTCTAATGGATAGGACAG+AGG | - | chr8_2:68413270-68413289 | Msa1264830:intron | 40.0% |
ACAGAGGTCTTCTAAACCTT+TGG | - | chr8_2:68413286-68413305 | Msa1264830:intron | 40.0% | |
GTAAACACCTCTTATACTGC+AGG | - | chr8_2:68413665-68413684 | Msa1264830:intron | 40.0% | |
! | CTATGTAGTTGGGAGTGTAA+TGG | + | chr8_2:68413805-68413824 | None:intergenic | 40.0% |
GGACATACCATGACATCAAA+AGG | - | chr8_2:68413833-68413852 | Msa1264830:intron | 40.0% | |
! | AAATGGGCCTTTTGATGTCA+TGG | + | chr8_2:68413843-68413862 | None:intergenic | 40.0% |
AGGTTGGGCGTAGATAAAAT+GGG | + | chr8_2:68413859-68413878 | None:intergenic | 40.0% | |
AAGGTTGGGCGTAGATAAAA+TGG | + | chr8_2:68413860-68413879 | None:intergenic | 40.0% | |
GTCTGACCCTCACTTATAAT+AGG | - | chr8_2:68414176-68414195 | Msa1264830:CDS | 40.0% | |
CTTGGTTGACCAGATATTTC+TGG | - | chr8_2:68414570-68414589 | Msa1264830:exon | 40.0% | |
GAATCTCAAATCGATGGCGA+TGG | - | chr8_2:68409144-68409163 | Msa1264830:three_prime_UTR | 45.0% | |
GAGTGAGAGAGAACGAACAA+GGG | + | chr8_2:68409262-68409281 | None:intergenic | 45.0% | |
AGAGTGAGAGAGAACGAACA+AGG | + | chr8_2:68409263-68409282 | None:intergenic | 45.0% | |
AGCAACCATCTTCATAGCCT+TGG | + | chr8_2:68409567-68409586 | None:intergenic | 45.0% | |
! | AACTACGTGCTGTTCAAACC+AGG | - | chr8_2:68409594-68409613 | Msa1264830:CDS | 45.0% |
! | ACTACGTGCTGTTCAAACCA+GGG | - | chr8_2:68409595-68409614 | Msa1264830:CDS | 45.0% |
GTGTTTGATACCGACATGTG+TGG | + | chr8_2:68409877-68409896 | None:intergenic | 45.0% | |
GTATCAAACACTGACGAGTG+AGG | - | chr8_2:68409886-68409905 | Msa1264830:intron | 45.0% | |
TCAGACAAAGGTCTTTGTGG+TGG | - | chr8_2:68410119-68410138 | Msa1264830:intron | 45.0% | |
CACGTCTGTCAAGATAAGCA+GGG | - | chr8_2:68410151-68410170 | Msa1264830:intron | 45.0% | |
! | GCCTTGAGCAAGTTGAATTC+TGG | - | chr8_2:68410173-68410192 | Msa1264830:intron | 45.0% |
CATATTGGGAGAGAAGGCTA+AGG | - | chr8_2:68410509-68410528 | Msa1264830:intron | 45.0% | |
ATGTGGTGGTTGCTTAATGC+TGG | - | chr8_2:68410881-68410900 | Msa1264830:intron | 45.0% | |
TGGTTGCTTAATGCTGGCAA+GGG | - | chr8_2:68410887-68410906 | Msa1264830:intron | 45.0% | |
! | GGCTTTAATGTCACTGGGTT+GGG | + | chr8_2:68410915-68410934 | None:intergenic | 45.0% |
! | AGGCTTTAATGTCACTGGGT+TGG | + | chr8_2:68410916-68410935 | None:intergenic | 45.0% |
TATTTCATGTCAGGGGACCT+GGG | + | chr8_2:68411366-68411385 | None:intergenic | 45.0% | |
ATATTTCATGTCAGGGGACC+TGG | + | chr8_2:68411367-68411386 | None:intergenic | 45.0% | |
! | TAAAATGCTATCTGGGACCG+GGG | - | chr8_2:68411835-68411854 | Msa1264830:intron | 45.0% |
GTTGTGTGGAGGGATAGATA+TGG | + | chr8_2:68411959-68411978 | None:intergenic | 45.0% | |
ATAGGAAGCGGAAAGTTGTG+TGG | + | chr8_2:68411973-68411992 | None:intergenic | 45.0% | |
AAGCATGCGTACTCCAAACA+TGG | - | chr8_2:68412235-68412254 | Msa1264830:intron | 45.0% | |
! | CTCCAAACATGGAGAAGTAC+CGG | - | chr8_2:68412246-68412265 | Msa1264830:intron | 45.0% |
!! | TCCAAACATGGAGAAGTACC+GGG | - | chr8_2:68412247-68412266 | Msa1264830:intron | 45.0% |
GTTGGTGCAGCAAAAACGTA+AGG | - | chr8_2:68412335-68412354 | Msa1264830:intron | 45.0% | |
AAATGAAGGTCCAGGTACGT+TGG | + | chr8_2:68412499-68412518 | None:intergenic | 45.0% | |
ATGATGCATAGGTACGGGTA+CGG | + | chr8_2:68412570-68412589 | None:intergenic | 45.0% | |
CGTACCTATGCATCATAGCT+AGG | - | chr8_2:68412574-68412593 | Msa1264830:intron | 45.0% | |
GCTTCCTAGCTATGATGCAT+AGG | + | chr8_2:68412581-68412600 | None:intergenic | 45.0% | |
!! | CGAGAGAAAGCATCAAGAGA+AGG | - | chr8_2:68412623-68412642 | Msa1264830:intron | 45.0% |
! | TTGAGGCATTTGAGAGACCT+GGG | + | chr8_2:68412912-68412931 | None:intergenic | 45.0% |
! | GCGTCCATTGTCTAATGGAT+AGG | - | chr8_2:68413263-68413282 | Msa1264830:intron | 45.0% |
TCACAACCCTGCAGTATAAG+AGG | + | chr8_2:68413675-68413694 | None:intergenic | 45.0% | |
CTTGACAGGTCACTACTTTG+TGG | + | chr8_2:68413715-68413734 | None:intergenic | 45.0% | |
! | AGAGGTGTACTTGGACTCTT+GGG | + | chr8_2:68413775-68413794 | None:intergenic | 45.0% |
! | TGTAGTTGGGAGTGTAATGG+AGG | + | chr8_2:68413802-68413821 | None:intergenic | 45.0% |
! | TTTCAAGGCGAAACTAGCCT+TGG | - | chr8_2:68414541-68414560 | Msa1264830:CDS | 45.0% |
!! | TTCAAGGCGAAACTAGCCTT+GGG | - | chr8_2:68414542-68414561 | Msa1264830:CDS | 45.0% |
!! | AACTAGCCTTGGGGATTTCT+TGG | - | chr8_2:68414552-68414571 | Msa1264830:CDS | 45.0% |
!! | GAATAAAAAAATAAAAAATT+AGG | + | chr8_2:68409422-68409441 | None:intergenic | 5.0% |
!!! | TTGTTTATATAAATTTTATA+AGG | - | chr8_2:68413039-68413058 | Msa1264830:intron | 5.0% |
TCGCTGAGAGAGAGAAAGAG+AGG | + | chr8_2:68409115-68409134 | None:intergenic | 50.0% | |
GGTGGTTGAGAAGACATGAG+AGG | + | chr8_2:68409205-68409224 | None:intergenic | 50.0% | |
!! | GATCGGAGAGTGGTGTTGAT+TGG | + | chr8_2:68409226-68409245 | None:intergenic | 50.0% |
AGGGAGAGATGAGAGGAGAT+CGG | + | chr8_2:68409243-68409262 | None:intergenic | 50.0% | |
ACGAACAAGGGAGAGATGAG+AGG | + | chr8_2:68409250-68409269 | None:intergenic | 50.0% | |
ACCAGGGCTGAAAATTCACG+TGG | - | chr8_2:68409611-68409630 | Msa1264830:CDS | 50.0% | |
! | ACCACGTGAATTTTCAGCCC+TGG | + | chr8_2:68409615-68409634 | None:intergenic | 50.0% |
CAGCCATTTACCGCTCTTCT+CGG | - | chr8_2:68409641-68409660 | Msa1264830:CDS | 50.0% | |
! | GTCGGTGCTTCATTGGTGAA+GGG | + | chr8_2:68409795-68409814 | None:intergenic | 50.0% |
! | TGTCGGTGCTTCATTGGTGA+AGG | + | chr8_2:68409796-68409815 | None:intergenic | 50.0% |
! | TGTGTGTGTCGGTGCTTCAT+TGG | + | chr8_2:68409802-68409821 | None:intergenic | 50.0% |
CCTGCTTATCTTGACAGACG+TGG | + | chr8_2:68410153-68410172 | None:intergenic | 50.0% | |
CCACGTCTGTCAAGATAAGC+AGG | - | chr8_2:68410150-68410169 | Msa1264830:intron | 50.0% | |
GTGGTTGCTTAATGCTGGCA+AGG | - | chr8_2:68410886-68410905 | Msa1264830:intron | 50.0% | |
ACGTGGAGTATGATGCACTG+AGG | - | chr8_2:68411218-68411237 | Msa1264830:intron | 50.0% | |
GTCAACTATACTATCCCCCG+AGG | - | chr8_2:68411288-68411307 | Msa1264830:intron | 50.0% | |
GTTGAAAGAGAGGCTGAAGC+TGG | - | chr8_2:68411518-68411537 | Msa1264830:intron | 50.0% | |
ACCGGGGTGAAATCCATAAC+AGG | - | chr8_2:68411851-68411870 | Msa1264830:intron | 50.0% | |
CCCTGTTATGGATTTCACCC+CGG | + | chr8_2:68411855-68411874 | None:intergenic | 50.0% | |
CCGGGGTGAAATCCATAACA+GGG | - | chr8_2:68411852-68411871 | Msa1264830:intron | 50.0% | |
CAAATAGCCAGGTAGGAGCT+AGG | + | chr8_2:68411927-68411946 | None:intergenic | 50.0% | |
CTAGCTCCTACCTGGCTATT+TGG | - | chr8_2:68411925-68411944 | Msa1264830:intron | 50.0% | |
GAAGCGGAAAGTTGTGTGGA+GGG | + | chr8_2:68411969-68411988 | None:intergenic | 50.0% | |
ACCCGGTACTTCTCCATGTT+TGG | + | chr8_2:68412251-68412270 | None:intergenic | 50.0% | |
!! | ATGGGTACCGGTGCGTAATA+CGG | + | chr8_2:68412533-68412552 | None:intergenic | 50.0% |
CTAGGAAGCGGTCAAAGCAT+AGG | - | chr8_2:68412592-68412611 | Msa1264830:intron | 50.0% | |
GAAGCGGTCAAAGCATAGGA+AGG | - | chr8_2:68412596-68412615 | Msa1264830:intron | 50.0% | |
CATTTGAGAGACCTGGGATC+TGG | + | chr8_2:68412906-68412925 | None:intergenic | 50.0% | |
! | CTTGAGGCATTTGAGAGACC+TGG | + | chr8_2:68412913-68412932 | None:intergenic | 50.0% |
TGTACTTGGACTCTTGGGGA+AGG | + | chr8_2:68413770-68413789 | None:intergenic | 50.0% | |
GAGGTGTACTTGGACTCTTG+GGG | + | chr8_2:68413774-68413793 | None:intergenic | 50.0% | |
! | CAGAGGTGTACTTGGACTCT+TGG | + | chr8_2:68413776-68413795 | None:intergenic | 50.0% |
! | AGTTGGGAGTGTAATGGAGG+AGG | + | chr8_2:68413799-68413818 | None:intergenic | 50.0% |
GGTCATGTTCAATGCGGTGT+TGG | - | chr8_2:68414075-68414094 | Msa1264830:CDS | 50.0% | |
ATTCCTGCTAGAGCTGTCCA+TGG | + | chr8_2:68414137-68414156 | None:intergenic | 50.0% | |
! | ACAGCTCTAGCAGGAATGCT+GGG | - | chr8_2:68414140-68414159 | Msa1264830:CDS | 50.0% |
!! | TCAAGGCGAAACTAGCCTTG+GGG | - | chr8_2:68414543-68414562 | Msa1264830:CDS | 50.0% |
GGTCAACCAAGAAATCCCCA+AGG | + | chr8_2:68414561-68414580 | None:intergenic | 50.0% | |
!! | CGGAGAGTGGTGTTGATTGG+TGG | + | chr8_2:68409223-68409242 | None:intergenic | 55.0% |
GATGAGAGGAGATCGGAGAG+TGG | + | chr8_2:68409236-68409255 | None:intergenic | 55.0% | |
TCGCCGAGAAGAGCGGTAAA+TGG | + | chr8_2:68409647-68409666 | None:intergenic | 55.0% | |
TGTAGCATCGCCGAGAAGAG+CGG | + | chr8_2:68409654-68409673 | None:intergenic | 55.0% | |
GAAAGAGAGGCTGAAGCTGG+AGG | - | chr8_2:68411521-68411540 | Msa1264830:intron | 55.0% | |
GCTGAAGCTGGAGGAAGTCT+CGG | - | chr8_2:68411530-68411549 | Msa1264830:intron | 55.0% | |
TGGAGGAAGTCTCGGTGAAC+TGG | - | chr8_2:68411538-68411557 | Msa1264830:intron | 55.0% | |
CCAGGTAGGAGCTAGGTTAG+AGG | + | chr8_2:68411920-68411939 | None:intergenic | 55.0% | |
CCTCTAACCTAGCTCCTACC+TGG | - | chr8_2:68411917-68411936 | Msa1264830:intron | 55.0% | |
GGAAGCGGAAAGTTGTGTGG+AGG | + | chr8_2:68411970-68411989 | None:intergenic | 55.0% | |
!! | AGAAGTACCGGGTACGCGTA+TGG | - | chr8_2:68412258-68412277 | Msa1264830:intron | 55.0% |
ACGAGTACCATACGCGTACC+CGG | + | chr8_2:68412268-68412287 | None:intergenic | 55.0% | |
ATAGGTACGGGTACGGTACC+CGG | + | chr8_2:68412563-68412582 | None:intergenic | 55.0% | |
TAGTTTGGGAGCCAGATCCC+AGG | - | chr8_2:68412892-68412911 | Msa1264830:intron | 55.0% | |
TTGGACTCTTGGGGAAGGAC+GGG | + | chr8_2:68413765-68413784 | None:intergenic | 55.0% | |
CTTGGACTCTTGGGGAAGGA+CGG | + | chr8_2:68413766-68413785 | None:intergenic | 55.0% | |
! | GAGTGTAATGGAGGAGGCAG+AGG | + | chr8_2:68413793-68413812 | None:intergenic | 55.0% |
GAGAATGCCTGCAGTGAGCA+AGG | - | chr8_2:68414097-68414116 | Msa1264830:CDS | 55.0% | |
AGGAGCAAGGATGTCTGCCA+TGG | - | chr8_2:68414117-68414136 | Msa1264830:CDS | 55.0% | |
! | GACAGCTCTAGCAGGAATGC+TGG | - | chr8_2:68414139-68414158 | Msa1264830:CDS | 55.0% |
! | CAGCTCTAGCAGGAATGCTG+GGG | - | chr8_2:68414141-68414160 | Msa1264830:CDS | 55.0% |
!! | TCTGGAGCATCAGCACTGAC+AGG | - | chr8_2:68414392-68414411 | Msa1264830:intron | 55.0% |
CCAAACGCTTCCCTTCGCGT+CGG | + | chr8_2:68409180-68409199 | None:intergenic | 60.0% | |
ACCGGTACCCATACCCGTAC+CGG | - | chr8_2:68412541-68412560 | Msa1264830:intron | 60.0% | |
ACGGTACCCGGTACGGGTAT+GGG | + | chr8_2:68412551-68412570 | None:intergenic | 60.0% | |
TACGGTACCCGGTACGGGTA+TGG | + | chr8_2:68412552-68412571 | None:intergenic | 60.0% | |
TACGGGTACGGTACCCGGTA+CGG | + | chr8_2:68412558-68412577 | None:intergenic | 60.0% | |
!! | GAAGGACGGGGCTTTTGGGA+AGG | + | chr8_2:68413752-68413771 | None:intergenic | 60.0% |
! | TGGGGAAGGACGGGGCTTTT+GGG | + | chr8_2:68413756-68413775 | None:intergenic | 60.0% |
! | TTGGGGAAGGACGGGGCTTT+TGG | + | chr8_2:68413757-68413776 | None:intergenic | 60.0% |
TGGACTCTTGGGGAAGGACG+GGG | + | chr8_2:68413764-68413783 | None:intergenic | 60.0% | |
! | GGAGGAGGCAGAGGTGTACT+TGG | + | chr8_2:68413784-68413803 | None:intergenic | 60.0% |
CCTTGCTCCTTGCTCACTGC+AGG | + | chr8_2:68414107-68414126 | None:intergenic | 60.0% | |
CCTGCAGTGAGCAAGGAGCA+AGG | - | chr8_2:68414104-68414123 | Msa1264830:CDS | 60.0% | |
! | CTGCCATGGACAGCTCTAGC+AGG | - | chr8_2:68414131-68414150 | Msa1264830:CDS | 60.0% |
CTGCTGCACTCCGACGCGAA+GGG | - | chr8_2:68409167-68409186 | Msa1264830:three_prime_UTR | 65.0% | |
!! | CCGACGCGAAGGGAAGCGTT+TGG | - | chr8_2:68409177-68409196 | Msa1264830:three_prime_UTR | 65.0% |
CCCGGTACGGGTATGGGTAC+CGG | + | chr8_2:68412545-68412564 | None:intergenic | 65.0% | |
CCGGTACCCATACCCGTACC+GGG | - | chr8_2:68412542-68412561 | Msa1264830:intron | 65.0% | |
ACGGGTACGGTACCCGGTAC+GGG | + | chr8_2:68412557-68412576 | None:intergenic | 65.0% | |
GCTGCTGCACTCCGACGCGA+AGG | - | chr8_2:68409166-68409185 | Msa1264830:three_prime_UTR | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 68408993 | 68414745 | 68408993 | ID=Msa1264830;Name=Msa1264830 |
chr8_2 | mRNA | 68408993 | 68414745 | 68408993 | ID=Msa1264830-mRNA-1;Parent=Msa1264830;Name=Msa1264830-mRNA-1;_AED=0.07;_eAED=0.07;_QI=164|1|1|1|1|1|9|327|327 |
chr8_2 | exon | 68408993 | 68409389 | 68408993 | ID=Msa1264830-mRNA-1:exon:22693;Parent=Msa1264830-mRNA-1 |
chr8_2 | exon | 68409541 | 68409662 | 68409541 | ID=Msa1264830-mRNA-1:exon:22692;Parent=Msa1264830-mRNA-1 |
chr8_2 | exon | 68412104 | 68412223 | 68412104 | ID=Msa1264830-mRNA-1:exon:22691;Parent=Msa1264830-mRNA-1 |
chr8_2 | exon | 68412429 | 68412551 | 68412429 | ID=Msa1264830-mRNA-1:exon:22690;Parent=Msa1264830-mRNA-1 |
chr8_2 | exon | 68413127 | 68413254 | 68413127 | ID=Msa1264830-mRNA-1:exon:22689;Parent=Msa1264830-mRNA-1 |
chr8_2 | exon | 68413544 | 68413657 | 68413544 | ID=Msa1264830-mRNA-1:exon:22688;Parent=Msa1264830-mRNA-1 |
chr8_2 | exon | 68414064 | 68414216 | 68414064 | ID=Msa1264830-mRNA-1:exon:22687;Parent=Msa1264830-mRNA-1 |
chr8_2 | exon | 68414344 | 68414390 | 68414344 | ID=Msa1264830-mRNA-1:exon:22686;Parent=Msa1264830-mRNA-1 |
chr8_2 | exon | 68414475 | 68414745 | 68414475 | ID=Msa1264830-mRNA-1:exon:22685;Parent=Msa1264830-mRNA-1 |
chr8_2 | five_prime_UTR | 68414582 | 68414745 | 68414582 | ID=Msa1264830-mRNA-1:five_prime_utr;Parent=Msa1264830-mRNA-1 |
chr8_2 | CDS | 68414475 | 68414581 | 68414475 | ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1 |
chr8_2 | CDS | 68414344 | 68414390 | 68414344 | ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1 |
chr8_2 | CDS | 68414064 | 68414216 | 68414064 | ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1 |
chr8_2 | CDS | 68413544 | 68413657 | 68413544 | ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1 |
chr8_2 | CDS | 68413127 | 68413254 | 68413127 | ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1 |
chr8_2 | CDS | 68412429 | 68412551 | 68412429 | ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1 |
chr8_2 | CDS | 68412104 | 68412223 | 68412104 | ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1 |
chr8_2 | CDS | 68409541 | 68409662 | 68409541 | ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1 |
chr8_2 | CDS | 68409320 | 68409389 | 68409320 | ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1 |
chr8_2 | three_prime_UTR | 68408993 | 68409319 | 68408993 | ID=Msa1264830-mRNA-1:three_prime_utr;Parent=Msa1264830-mRNA-1 |
Gene Sequence |
Protein sequence |