AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1264830


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1264830 MtrunA17_Chr4g0073341 99.388 327 2 0 1 327 1 327 0.0 659
Msa1264830 MtrunA17_Chr2g0288451 28.455 369 200 10 17 325 9 373 1.96e-26 107
Msa1264830 MtrunA17_Chr3g0099081 28.261 322 179 10 52 325 30 347 1.11e-25 105
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1264830 AT2G33040.1 78.769 325 65 3 1 325 1 321 0.0 522
Msa1264830 AT4G04640.1 29.296 355 191 9 15 324 32 371 1.62e-30 119
Msa1264830 AT1G15700.1 28.000 325 176 9 52 325 66 383 1.41e-25 105

Find 94 sgRNAs with CRISPR-Local

Find 360 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGTTGACCAGATATTTC+TGG 0.183476 8_2:-68409146 Msa1264830:three_prime_UTR
AAACGATTATTATTATAAAA+AGG 0.224110 8_2:+68409195 None:intergenic
CAAAGGCCAATAGTTATTAT+TGG 0.237572 8_2:+68409054 None:intergenic
CGTACTATTTCCACTCAAAT+TGG 0.238116 8_2:-68414343 Msa1264830:intron
ACATACTTTGTCTCTTTATC+AGG 0.264351 8_2:+68413230 None:intergenic
GCCTTGAGCAAGTTGAATTC+TGG 0.280287 8_2:-68413543 Msa1264830:intron
AACTAGCCTTGGGGATTTCT+TGG 0.282149 8_2:-68409164 Msa1264830:three_prime_UTR
TACAGAGATCAATCTTCTAT+TGG 0.285686 8_2:-68414373 Msa1264830:intron
TTATTTCCAATAATAACTAT+TGG 0.339761 8_2:-68409060 Msa1264830:three_prime_UTR
AGAGACAAAGTATGTCATAT+TGG 0.347992 8_2:-68413222 Msa1264830:CDS
TTGTACGTACGCAAGAAAAC+TGG 0.369183 8_2:+68412094 None:intergenic
GTCTGACCCTCACTTATAAT+AGG 0.386053 8_2:-68409540 Msa1264830:intron
GAGACAAAGTATGTCATATT+GGG 0.404543 8_2:-68413221 Msa1264830:CDS
TTATAATAATAATCGTTTCA+AGG 0.413740 8_2:-68409190 Msa1264830:three_prime_UTR
TTGTAGGTGTTATTTGGGCA+AGG 0.419437 8_2:+68408980 None:intergenic
CTGAAAATTCACGTGGTTTG+TGG 0.419923 8_2:-68414098 Msa1264830:CDS
AAAACAATTCCAGAAATATC+TGG 0.429809 8_2:+68409137 None:intergenic
GACAGCTCTAGCAGGAATGC+TGG 0.431443 8_2:-68409577 Msa1264830:CDS
TTCAAGGCGAAACTAGCCTT+GGG 0.435586 8_2:-68409174 Msa1264830:three_prime_UTR
TGGAGGAAGTCTCGGTGAAC+TGG 0.443236 8_2:-68412178 Msa1264830:CDS
CCTTGCTCCTTGCTCACTGC+AGG 0.446628 8_2:+68409612 None:intergenic
CAGCCATTTACCGCTCTTCT+CGG 0.447516 8_2:-68414075 Msa1264830:CDS
GAATTGATTGAGATTATCTC+TGG 0.457104 8_2:-68409342 Msa1264830:CDS
TGTAGGTGTTATTTGGGCAA+GGG 0.459087 8_2:+68408981 None:intergenic
TTGTTTGTGCAGTGAGAAAT+CGG 0.465696 8_2:-68414206 Msa1264830:intron
ATGACGATATTGAGATATAT+CGG 0.467507 8_2:-68409263 Msa1264830:three_prime_UTR
TCTTCAGACAAAGGTCTTTG+TGG 0.469713 8_2:-68413600 Msa1264830:CDS
GATCGGAGAGTGGTGTTGAT+TGG 0.474940 8_2:+68414493 None:intergenic
AGAGATCAATCTTCTATTGG+AGG 0.475794 8_2:-68414370 Msa1264830:CDS
AGAGATAATCTCAATCAATT+CGG 0.476977 8_2:+68409344 None:intergenic
AAGACCTTTGTCTGAAGAAA+CGG 0.482952 8_2:+68413605 None:intergenic
CTGGATTCGTATGAGATTGA+AGG 0.483416 8_2:-68412159 Msa1264830:CDS
CGATATTGAGATATATCGGT+TGG 0.487663 8_2:-68409259 Msa1264830:three_prime_UTR
CTCGAACTGTTATTTACTTG+TGG 0.488869 8_2:-68409028 Msa1264830:three_prime_UTR
CCACGTCTGTCAAGATAAGC+AGG 0.495862 8_2:-68413566 Msa1264830:CDS
ACAGCTCTAGCAGGAATGCT+GGG 0.501839 8_2:-68409576 Msa1264830:CDS
AGCAACCATCTTCATAGCCT+TGG 0.502533 8_2:+68414152 None:intergenic
CATGTAGATTGTTGAAAGAG+AGG 0.506420 8_2:-68412208 Msa1264830:intron
GTTGAAAGAGAGGCTGAAGC+TGG 0.508534 8_2:-68412198 Msa1264830:CDS
CGGAGAGTGGTGTTGATTGG+TGG 0.512550 8_2:+68414496 None:intergenic
TTTCAAGGCGAAACTAGCCT+TGG 0.515698 8_2:-68409175 Msa1264830:three_prime_UTR
AACTACGTGCTGTTCAAACC+AGG 0.516036 8_2:-68414122 Msa1264830:CDS
GATGAGAGGAGATCGGAGAG+TGG 0.516462 8_2:+68414483 None:intergenic
CCGACGCGAAGGGAAGCGTT+TGG 0.523663 8_2:-68414539 Msa1264830:CDS
CTGCCATGGACAGCTCTAGC+AGG 0.525991 8_2:-68409585 Msa1264830:CDS
GCTGAAGCTGGAGGAAGTCT+CGG 0.540570 8_2:-68412186 Msa1264830:CDS
TCTGGAGCATCAGCACTGAC+AGG 0.540615 8_2:-68409324 Msa1264830:CDS
GCTGCTGCACTCCGACGCGA+AGG 0.542082 8_2:-68414550 Msa1264830:CDS
AATTACCAAGGCTATGAAGA+TGG 0.547208 8_2:-68414157 Msa1264830:CDS
TGGATTCGTATGAGATTGAA+GGG 0.556021 8_2:-68412158 Msa1264830:CDS
TCAGACAAAGGTCTTTGTGG+TGG 0.558554 8_2:-68413597 Msa1264830:CDS
GTATGTCATATTGGGAGAGA+AGG 0.558989 8_2:-68413213 Msa1264830:CDS
AATGAAAGTACCAATTTGAG+TGG 0.565521 8_2:+68414333 None:intergenic
GAGAATGCCTGCAGTGAGCA+AGG 0.566041 8_2:-68409619 Msa1264830:CDS
AAAGATACCTATTATAAGTG+AGG 0.568709 8_2:+68409533 None:intergenic
CTGCTGCACTCCGACGCGAA+GGG 0.583053 8_2:-68414549 Msa1264830:CDS
AAGATACCTATTATAAGTGA+GGG 0.587593 8_2:+68409534 None:intergenic
GGTCATGTTCAATGCGGTGT+TGG 0.590854 8_2:-68409641 Msa1264830:CDS
CGTTGTACAATTTCTACCAA+CGG 0.590879 8_2:-68412452 Msa1264830:CDS
AGGAGCAAGGATGTCTGCCA+TGG 0.594950 8_2:-68409599 Msa1264830:CDS
AGGGAGAGATGAGAGGAGAT+CGG 0.599654 8_2:+68414476 None:intergenic
ACGAAAGAATCTCAAATCGA+TGG 0.600840 8_2:-68414578 Msa1264830:exon
GAATCTCAAATCGATGGCGA+TGG 0.602234 8_2:-68414572 Msa1264830:exon
AATAACAGTTCGAGAAACAA+AGG 0.603461 8_2:+68409037 None:intergenic
GATAATCTCAATCAATTCGG+TGG 0.603991 8_2:+68409347 None:intergenic
GAATCCTCTGAATTATACTC+AGG 0.606536 8_2:-68413126 Msa1264830:intron
TGTAGCATCGCCGAGAAGAG+CGG 0.607988 8_2:+68414065 None:intergenic
ATTACCGTTTCTTCAGACAA+AGG 0.610426 8_2:-68413609 Msa1264830:CDS
ACGAACAAGGGAGAGATGAG+AGG 0.612203 8_2:+68414469 None:intergenic
ATTCCTGCTAGAGCTGTCCA+TGG 0.613830 8_2:+68409582 None:intergenic
GAAAGAGAGGCTGAAGCTGG+AGG 0.621120 8_2:-68412195 Msa1264830:CDS
CCTGCAGTGAGCAAGGAGCA+AGG 0.624108 8_2:-68409612 Msa1264830:CDS
CTAACCTGAGTATAATTCAG+AGG 0.633689 8_2:+68413122 None:intergenic
TCGCTGAGAGAGAGAAAGAG+AGG 0.639910 8_2:+68414604 None:intergenic
CAGCTCTAGCAGGAATGCTG+GGG 0.652373 8_2:-68409575 Msa1264830:CDS
CATATTGGGAGAGAAGGCTA+AGG 0.655816 8_2:-68413207 Msa1264830:CDS
CCTGCTTATCTTGACAGACG+TGG 0.656536 8_2:+68413566 None:intergenic
ACCAGAATTCAACTTGCTCA+AGG 0.662579 8_2:+68413542 None:intergenic
TACGCAAGAAAACTGGAACT+CGG 0.672354 8_2:+68412101 None:intergenic
CACGTCTGTCAAGATAAGCA+GGG 0.673248 8_2:-68413565 Msa1264830:CDS
GAATATTCAGAAAATTACCA+AGG 0.679225 8_2:-68414169 Msa1264830:CDS
CCAAACGCTTCCCTTCGCGT+CGG 0.680197 8_2:+68414539 None:intergenic
ACCAGGGCTGAAAATTCACG+TGG 0.682606 8_2:-68414105 Msa1264830:CDS
TCAAGGCGAAACTAGCCTTG+GGG 0.682760 8_2:-68409173 Msa1264830:three_prime_UTR
GATAGTATAGTTGACACCGT+TGG 0.683787 8_2:+68412436 None:intergenic
GGTGGTTGAGAAGACATGAG+AGG 0.688310 8_2:+68414514 None:intergenic
GGATTCGTATGAGATTGAAG+GGG 0.696951 8_2:-68412157 Msa1264830:CDS
ACTACGTGCTGTTCAAACCA+GGG 0.699734 8_2:-68414121 Msa1264830:CDS
GATTCGTATGAGATTGAAGG+GGG 0.707101 8_2:-68412156 Msa1264830:CDS
CGTTGGTAGAAATTGTACAA+CGG 0.712891 8_2:+68412453 None:intergenic
GGTCAACCAAGAAATCCCCA+AGG 0.725747 8_2:+68409158 None:intergenic
TATATAGGTCATGTTCAATG+CGG 0.738383 8_2:-68409647 Msa1264830:intron
AATAGATGAAAGTACCTCGG+GGG 0.741176 8_2:+68412414 None:intergenic
ACGTGGAGTATGATGCACTG+AGG 0.781586 8_2:-68412498 Msa1264830:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAAAAATAAAAAATTA+GGG + chr8_2:68409421-68409440 None:intergenic 0.0%
!! TACGAATATAATTAATATAT+AGG + chr8_2:68413369-68413388 None:intergenic 10.0%
!! ACTAATTATGAATATAATAA+AGG - chr8_2:68413501-68413520 Msa1264830:intron 10.0%
!! AAACGATTATTATTATAAAA+AGG + chr8_2:68414524-68414543 None:intergenic 10.0%
!!! ATTAAATTTTGATTGTGTTA+TGG - chr8_2:68409477-68409496 Msa1264830:intron 15.0%
!! CAAATTGTAACAAAATAAAA+AGG + chr8_2:68409700-68409719 None:intergenic 15.0%
!!! AAATATTTTGAGATAAAATC+CGG - chr8_2:68410425-68410444 Msa1264830:intron 15.0%
!!! ATTCCTTAACAATTTAATTT+AGG + chr8_2:68410673-68410692 None:intergenic 15.0%
!! TTAAGGAATATTGAAAAATA+TGG - chr8_2:68410684-68410703 Msa1264830:intron 15.0%
!!! ATGTTTAAATAGCTTATTTT+GGG + chr8_2:68411043-68411062 None:intergenic 15.0%
!!! AATGTTTAAATAGCTTATTT+TGG + chr8_2:68411044-68411063 None:intergenic 15.0%
!! AACAATTAAAACTAAACAAT+GGG + chr8_2:68411157-68411176 None:intergenic 15.0%
!! AAATTATATACTACAACATT+CGG - chr8_2:68412741-68412760 Msa1264830:intron 15.0%
!! TATACTTTATTGTTGTATAT+AGG - chr8_2:68414054-68414073 Msa1264830:intron 15.0%
!! TTATAATAATAATCGTTTCA+AGG - chr8_2:68414526-68414545 Msa1264830:CDS 15.0%
!! TTATTTCCAATAATAACTAT+TGG - chr8_2:68414656-68414675 Msa1264830:five_prime_UTR 15.0%
!!! TCTTAGATTTTTGATGAATT+AGG - chr8_2:68409445-68409464 Msa1264830:intron 20.0%
!! TTGTATGATTGTGTAATAAT+TGG - chr8_2:68409744-68409763 Msa1264830:intron 20.0%
!! AGTCCTAAATTAAATTGTTA+AGG - chr8_2:68410667-68410686 Msa1264830:intron 20.0%
!! AGATATATATGTAAAACACA+AGG + chr8_2:68410752-68410771 None:intergenic 20.0%
!! TAGAAAACAAAGTTTATAAG+TGG - chr8_2:68410771-68410790 Msa1264830:intron 20.0%
!! TCTTTATAACAAACTAATTC+AGG + chr8_2:68410798-68410817 None:intergenic 20.0%
!! TCATTTATTCAACAACAAAA+AGG + chr8_2:68410936-68410955 None:intergenic 20.0%
!!! TGTTTAAATAGCTTATTTTG+GGG + chr8_2:68411042-68411061 None:intergenic 20.0%
!! CAACAATTAAAACTAAACAA+TGG + chr8_2:68411158-68411177 None:intergenic 20.0%
!!! GTTTTAATTGTTGTATTTTC+AGG - chr8_2:68411165-68411184 Msa1264830:intron 20.0%
!!! TATTGCAAAATAAGTTTTCA+TGG + chr8_2:68411431-68411450 None:intergenic 20.0%
!!! AAAACTTATTTTGCAATATC+AGG - chr8_2:68411433-68411452 Msa1264830:intron 20.0%
!! TAGAATATAAAATGCTATCT+GGG - chr8_2:68411828-68411847 Msa1264830:intron 20.0%
!! TTAAGATGATTATGATTTCA+TGG - chr8_2:68412024-68412043 Msa1264830:intron 20.0%
!!! TTTTGATCAAAATAGTAGAA+GGG - chr8_2:68412388-68412407 Msa1264830:intron 20.0%
!! AAGTATAAAAGAAACGAAAA+AGG + chr8_2:68413004-68413023 None:intergenic 20.0%
!! CAATTGCAATAAAATTGATA+TGG + chr8_2:68413346-68413365 None:intergenic 20.0%
!! TTTATCATTATAAACTTGAC+AGG + chr8_2:68413729-68413748 None:intergenic 20.0%
!! ATAAGTATAATTTGAAAGAG+AGG + chr8_2:68414029-68414048 None:intergenic 20.0%
!!! TTTAGACAAAATTTTTGTTC+TGG - chr8_2:68414244-68414263 Msa1264830:intron 20.0%
! AGAACTGTATTAAAAAGCTA+GGG - chr8_2:68409087-68409106 Msa1264830:three_prime_UTR 25.0%
! AATGAAGAGGTTAATTGAAA+AGG + chr8_2:68409313-68409332 None:intergenic 25.0%
! GTAATAGAAATGAAATGAAG+AGG + chr8_2:68409326-68409345 None:intergenic 25.0%
! GAATATTCAGAAAATTACCA+AGG - chr8_2:68409547-68409566 Msa1264830:CDS 25.0%
! TCCTATTCATCAAAAATCAA+GGG + chr8_2:68409970-68409989 None:intergenic 25.0%
! TTCCTATTCATCAAAAATCA+AGG + chr8_2:68409971-68409990 None:intergenic 25.0%
! AACGCCTAAAAGAATATAAA+CGG + chr8_2:68410066-68410085 None:intergenic 25.0%
!! TGTGAAATACTGTTTTCATT+TGG - chr8_2:68410354-68410373 Msa1264830:intron 25.0%
! CTAGATATATGTAAAACACA+AGG + chr8_2:68410636-68410655 None:intergenic 25.0%
!! TTTTCTGACTGAATATAATG+TGG - chr8_2:68410864-68410883 Msa1264830:intron 25.0%
! AGCTATTTAAACATTCATTG+TGG - chr8_2:68411049-68411068 Msa1264830:intron 25.0%
! GCTATTTAAACATTCATTGT+GGG - chr8_2:68411050-68411069 Msa1264830:intron 25.0%
!!! TTTAATAGATGAAAGTACCT+CGG + chr8_2:68411308-68411327 None:intergenic 25.0%
! CTAATTCAAATTGACGAAAT+GGG + chr8_2:68411694-68411713 None:intergenic 25.0%
! ACTAATTCAAATTGACGAAA+TGG + chr8_2:68411695-68411714 None:intergenic 25.0%
! GTAGAATATAAAATGCTATC+TGG - chr8_2:68411827-68411846 Msa1264830:intron 25.0%
! AAAATTTGGTATAGAGAGTA+AGG + chr8_2:68411889-68411908 None:intergenic 25.0%
!!! AAACTTGTTACAAAGTCAAT+AGG + chr8_2:68411991-68412010 None:intergenic 25.0%
! ATCATAATCATCTTAATGCA+AGG + chr8_2:68412020-68412039 None:intergenic 25.0%
! TGATATCACTTTACTTTCAA+AGG - chr8_2:68412085-68412104 Msa1264830:intron 25.0%
!! AAGATATTTTCAAAACCACT+AGG + chr8_2:68412159-68412178 None:intergenic 25.0%
! TAACTAAGTATAAACAGGTA+CGG + chr8_2:68412305-68412324 None:intergenic 25.0%
! CGAAATAACTAAGTATAAAC+AGG + chr8_2:68412310-68412329 None:intergenic 25.0%
!! GATCAAAAGCAAGATAATTT+TGG + chr8_2:68412376-68412395 None:intergenic 25.0%
!! CTTTTGATCAAAATAGTAGA+AGG - chr8_2:68412387-68412406 Msa1264830:intron 25.0%
!!! ATTTTAAAAAATGAAGGTCC+AGG + chr8_2:68412507-68412526 None:intergenic 25.0%
!!! CGGCAAATTTTAAAAAATGA+AGG + chr8_2:68412513-68412532 None:intergenic 25.0%
!! TTGTAGTTAGTTGATATTGT+TGG - chr8_2:68412795-68412814 Msa1264830:intron 25.0%
! CCAAATAAAACTATGTAGTT+GGG + chr8_2:68413815-68413834 None:intergenic 25.0%
! TCCAAATAAAACTATGTAGT+TGG + chr8_2:68413816-68413835 None:intergenic 25.0%
! AATCAATAAGCACAATATTC+AGG + chr8_2:68413927-68413946 None:intergenic 25.0%
! AAGATACCTATTATAAGTGA+GGG + chr8_2:68414185-68414204 None:intergenic 25.0%
! AAAGATACCTATTATAAGTG+AGG + chr8_2:68414186-68414205 None:intergenic 25.0%
! AGAGATAATCTCAATCAATT+CGG + chr8_2:68414375-68414394 None:intergenic 25.0%
! ATGACGATATTGAGATATAT+CGG - chr8_2:68414453-68414472 Msa1264830:intron 25.0%
!!! TTGGTTTCTTTTGAAATTGT+TGG - chr8_2:68414476-68414495 Msa1264830:CDS 25.0%
! AAAACAATTCCAGAAATATC+TGG + chr8_2:68414582-68414601 None:intergenic 25.0%
CAGAACTGTATTAAAAAGCT+AGG - chr8_2:68409086-68409105 Msa1264830:three_prime_UTR 30.0%
TACAGAGATCAATCTTCTAT+TGG - chr8_2:68409343-68409362 Msa1264830:CDS 30.0%
!! AATGAAAGTACCAATTTGAG+TGG + chr8_2:68409386-68409405 None:intergenic 30.0%
! ACCCTTGATTTTTGATGAAT+AGG - chr8_2:68409966-68409985 Msa1264830:intron 30.0%
! GGTTCCGTTTATATTCTTTT+AGG - chr8_2:68410059-68410078 Msa1264830:intron 30.0%
AAATACAACTGATGCAATTG+TGG + chr8_2:68410263-68410282 None:intergenic 30.0%
TTGAAATTGCAGACAATTGT+GGG + chr8_2:68410287-68410306 None:intergenic 30.0%
!!! AAAGGTTCTAAATTTTGTCG+GGG + chr8_2:68410330-68410349 None:intergenic 30.0%
!!! CAAAGGTTCTAAATTTTGTC+GGG + chr8_2:68410331-68410350 None:intergenic 30.0%
!!! GCAAAGGTTCTAAATTTTGT+CGG + chr8_2:68410332-68410351 None:intergenic 30.0%
AACAGTATTTCACATTGCAA+AGG + chr8_2:68410348-68410367 None:intergenic 30.0%
! TTTGAGATAAAATCCGGTAA+TGG - chr8_2:68410431-68410450 Msa1264830:intron 30.0%
! ATAAAATCCGGTAATGGTAA+TGG - chr8_2:68410437-68410456 Msa1264830:intron 30.0%
ACATACTTTGTCTCTTTATC+AGG + chr8_2:68410489-68410508 None:intergenic 30.0%
AGAGACAAAGTATGTCATAT+TGG - chr8_2:68410494-68410513 Msa1264830:intron 30.0%
GAGACAAAGTATGTCATATT+GGG - chr8_2:68410495-68410514 Msa1264830:intron 30.0%
AATATGGACATTGCTCTTAA+CGG - chr8_2:68410700-68410719 Msa1264830:intron 30.0%
! AAAAAGGCTTTAATGTCACT+GGG + chr8_2:68410920-68410939 None:intergenic 30.0%
CTAAACAATGGGTATATACT+CGG + chr8_2:68411146-68411165 None:intergenic 30.0%
!! TTAATAGATGAAAGTACCTC+GGG + chr8_2:68411307-68411326 None:intergenic 30.0%
GGGAAAAACTTCATTACAAT+AGG + chr8_2:68411346-68411365 None:intergenic 30.0%
! ATTGTAATGAAGTTTTTCCC+AGG - chr8_2:68411346-68411365 Msa1264830:intron 30.0%
TTGACAATATTTCATGTCAG+GGG + chr8_2:68411373-68411392 None:intergenic 30.0%
CTTGACAATATTTCATGTCA+GGG + chr8_2:68411374-68411393 None:intergenic 30.0%
ACTTGACAATATTTCATGTC+AGG + chr8_2:68411375-68411394 None:intergenic 30.0%
ATTCAAAATATGACAGTGCA+AGG - chr8_2:68411746-68411765 Msa1264830:intron 30.0%
TAGAGGAAAGTGAGAAAATT+TGG + chr8_2:68411903-68411922 None:intergenic 30.0%
GATGATTATGATTTCATGGA+TGG - chr8_2:68412028-68412047 Msa1264830:intron 30.0%
GAGTATATATGAACTCTGAA+TGG + chr8_2:68412694-68412713 None:intergenic 30.0%
GTTAGATAACTAGTTAGAGA+CGG - chr8_2:68412817-68412836 Msa1264830:intron 30.0%
TTAGATAACTAGTTAGAGAC+GGG - chr8_2:68412818-68412837 Msa1264830:intron 30.0%
ATTAGAGGATGCATACAATA+TGG - chr8_2:68412843-68412862 Msa1264830:intron 30.0%
TTAGAGGATGCATACAATAT+GGG - chr8_2:68412844-68412863 Msa1264830:intron 30.0%
ACAATATGGGTGAAGTAATA+AGG - chr8_2:68412857-68412876 Msa1264830:intron 30.0%
CAATATGGGTGAAGTAATAA+GGG - chr8_2:68412858-68412877 Msa1264830:intron 30.0%
AATATGGGTGAAGTAATAAG+GGG - chr8_2:68412859-68412878 Msa1264830:intron 30.0%
GAAAATATGAACAACACTTG+AGG + chr8_2:68412929-68412948 None:intergenic 30.0%
TTCACGAAAATTTCGTGAAA+AGG + chr8_2:68413223-68413242 None:intergenic 30.0%
! TTCACGAAATTTTCGTGAAA+AGG - chr8_2:68413224-68413243 Msa1264830:CDS 30.0%
! AAATGGTCAGTTTTTACTTC+AGG + chr8_2:68413572-68413591 None:intergenic 30.0%
ACTGACCATTTAATTATGAG+AGG - chr8_2:68413581-68413600 Msa1264830:CDS 30.0%
CTGACCATTTAATTATGAGA+GGG - chr8_2:68413582-68413601 Msa1264830:CDS 30.0%
!!! CCCAACTACATAGTTTTATT+TGG - chr8_2:68413812-68413831 Msa1264830:intron 30.0%
CTTGTTAACACAAAAGAATC+AGG + chr8_2:68413886-68413905 None:intergenic 30.0%
CTCAATAAAAAAGCAGCAAA+AGG + chr8_2:68413966-68413985 None:intergenic 30.0%
TATATAGGTCATGTTCAATG+CGG - chr8_2:68414069-68414088 Msa1264830:CDS 30.0%
AGATACTGATGCAATTATAC+AGG + chr8_2:68414275-68414294 None:intergenic 30.0%
GAATTGATTGAGATTATCTC+TGG - chr8_2:68414374-68414393 Msa1264830:intron 30.0%
!!! GGAATTGTTTTTTGATGTTG+AGG - chr8_2:68414591-68414610 Msa1264830:five_prime_UTR 30.0%
CAAAGGCCAATAGTTATTAT+TGG + chr8_2:68414665-68414684 None:intergenic 30.0%
AATAACAGTTCGAGAAACAA+AGG + chr8_2:68414682-68414701 None:intergenic 30.0%
ACGAAAGAATCTCAAATCGA+TGG - chr8_2:68409138-68409157 Msa1264830:three_prime_UTR 35.0%
AGAGATCAATCTTCTATTGG+AGG - chr8_2:68409346-68409365 Msa1264830:CDS 35.0%
CGTACTATTTCCACTCAAAT+TGG - chr8_2:68409373-68409392 Msa1264830:intron 35.0%
TTGTTTGTGCAGTGAGAAAT+CGG - chr8_2:68409510-68409529 Msa1264830:intron 35.0%
AATTACCAAGGCTATGAAGA+TGG - chr8_2:68409559-68409578 Msa1264830:CDS 35.0%
GACTGAAAACAAAGACTGAA+TGG - chr8_2:68409768-68409787 Msa1264830:intron 35.0%
TTGATTGTAACCACACATGT+CGG - chr8_2:68409864-68409883 Msa1264830:intron 35.0%
GAATGTGTGTCTAGTATTGT+TGG + chr8_2:68409915-68409934 None:intergenic 35.0%
! ACACATTCAATCAGAAGTGT+GGG - chr8_2:68409927-68409946 Msa1264830:intron 35.0%
CATCAAAAATCAAGGGTGAA+GGG + chr8_2:68409963-68409982 None:intergenic 35.0%
TCATCAAAAATCAAGGGTGA+AGG + chr8_2:68409964-68409983 None:intergenic 35.0%
ATGAATAGGAATTGTCCACA+CGG - chr8_2:68409980-68409999 Msa1264830:intron 35.0%
TTTCATGTCATTGCTCATTG+TGG - chr8_2:68410038-68410057 Msa1264830:intron 35.0%
ATTACCGTTTCTTCAGACAA+AGG - chr8_2:68410107-68410126 Msa1264830:intron 35.0%
AAGACCTTTGTCTGAAGAAA+CGG + chr8_2:68410114-68410133 None:intergenic 35.0%
TTGTTGTCTGTGTATTGTGA+TGG - chr8_2:68410209-68410228 Msa1264830:intron 35.0%
CTTGAAATTGCAGACAATTG+TGG + chr8_2:68410288-68410307 None:intergenic 35.0%
CACAATTGTCTGCAATTTCA+AGG - chr8_2:68410286-68410305 Msa1264830:intron 35.0%
! TTTGGAACCATTACCATTAC+CGG + chr8_2:68410447-68410466 None:intergenic 35.0%
CCTATAGTAGCAAATAGGTT+TGG + chr8_2:68410465-68410484 None:intergenic 35.0%
! CCAAACCTATTTGCTACTAT+AGG - chr8_2:68410462-68410481 Msa1264830:intron 35.0%
GAATCCTCTGAATTATACTC+AGG - chr8_2:68410590-68410609 Msa1264830:intron 35.0%
CTAACCTGAGTATAATTCAG+AGG + chr8_2:68410597-68410616 None:intergenic 35.0%
AATATGAACGTCACTCTAAC+TGG - chr8_2:68410826-68410845 Msa1264830:intron 35.0%
TCTGACTGAATATAATGTGG+TGG - chr8_2:68410867-68410886 Msa1264830:intron 35.0%
! CAAAAAGGCTTTAATGTCAC+TGG + chr8_2:68410921-68410940 None:intergenic 35.0%
TTGGGGAAAAATGCTTTCTT+TGG + chr8_2:68411025-68411044 None:intergenic 35.0%
!!! GTATTTTCAGGTTTCTGTCT+TGG - chr8_2:68411177-68411196 Msa1264830:intron 35.0%
! TGATGACATTCTGAAAAACG+TGG - chr8_2:68411201-68411220 Msa1264830:intron 35.0%
! CGTTGGTAGAAATTGTACAA+CGG + chr8_2:68411266-68411285 None:intergenic 35.0%
CGTTGTACAATTTCTACCAA+CGG - chr8_2:68411264-68411283 Msa1264830:intron 35.0%
!! TAATAGATGAAAGTACCTCG+GGG + chr8_2:68411306-68411325 None:intergenic 35.0%
TATTGTCAAGTTTCGACGTT+TGG - chr8_2:68411384-68411403 Msa1264830:intron 35.0%
TTACATCACACCATTGAAAC+AGG + chr8_2:68411479-68411498 None:intergenic 35.0%
CATGTAGATTGTTGAAAGAG+AGG - chr8_2:68411508-68411527 Msa1264830:intron 35.0%
TGGATTCGTATGAGATTGAA+GGG - chr8_2:68411558-68411577 Msa1264830:intron 35.0%
! TATAAAATGCTATCTGGGAC+CGG - chr8_2:68411833-68411852 Msa1264830:intron 35.0%
! GCTTAATTTGATCCCTGTTA+TGG + chr8_2:68411867-68411886 None:intergenic 35.0%
TTATTTCCAAATAGCCAGGT+AGG + chr8_2:68411934-68411953 None:intergenic 35.0%
GGAATTATTTCCAAATAGCC+AGG + chr8_2:68411938-68411957 None:intergenic 35.0%
GTTACAAAGTCAATAGGAAG+CGG + chr8_2:68411985-68412004 None:intergenic 35.0%
!! AAACTGCTCTAGAATGTTCT+TGG + chr8_2:68412065-68412084 None:intergenic 35.0%
!!! CATGATTTGTTGTGACCTTT+TGG - chr8_2:68412196-68412215 Msa1264830:CDS 35.0%
AAGTATAAACAGGTACGGTT+CGG + chr8_2:68412300-68412319 None:intergenic 35.0%
! CTTAGTTATTTCGTCGTAGT+TGG - chr8_2:68412317-68412336 Msa1264830:intron 35.0%
! ATGTTTTATACCAACGTACC+TGG - chr8_2:68412486-68412505 Msa1264830:CDS 35.0%
TATGAACTCTGAATGGAATG+CGG + chr8_2:68412687-68412706 None:intergenic 35.0%
CTCACATATAAGCTGTAAAG+TGG - chr8_2:68412711-68412730 Msa1264830:intron 35.0%
ATACTACAACATTCGGTAAC+TGG - chr8_2:68412748-68412767 Msa1264830:intron 35.0%
GTCTTCTAAACCTTTGGTAT+AGG - chr8_2:68413292-68413311 Msa1264830:intron 35.0%
AGGATTTGAACCTATACCAA+AGG + chr8_2:68413305-68413324 None:intergenic 35.0%
GGTATAGGTTCAAATCCTAT+TGG - chr8_2:68413307-68413326 Msa1264830:intron 35.0%
GGAAAAAATTTGCGTCCAAT+AGG + chr8_2:68413325-68413344 None:intergenic 35.0%
CAAGCCCTCTCATAATTAAA+TGG + chr8_2:68413589-68413608 None:intergenic 35.0%
GAAGAAAAGAAACACATCAC+TGG - chr8_2:68413643-68413662 Msa1264830:intron 35.0%
TAAACACCTCTTATACTGCA+GGG - chr8_2:68413666-68413685 Msa1264830:intron 35.0%
AAAGAATCAGGAACAAGGTT+GGG + chr8_2:68413874-68413893 None:intergenic 35.0%
AAAAGAATCAGGAACAAGGT+TGG + chr8_2:68413875-68413894 None:intergenic 35.0%
ACACAAAAGAATCAGGAACA+AGG + chr8_2:68413879-68413898 None:intergenic 35.0%
TTGAGAACTTTGACGTTTGA+AGG - chr8_2:68413998-68414017 Msa1264830:intron 35.0%
ACTGATGCAATTATACAGGA+TGG + chr8_2:68414271-68414290 None:intergenic 35.0%
! AGACTAGTCAGTGAAATCAT+AGG + chr8_2:68414313-68414332 None:intergenic 35.0%
GATAATCTCAATCAATTCGG+TGG + chr8_2:68414372-68414391 None:intergenic 35.0%
CGATATTGAGATATATCGGT+TGG - chr8_2:68414457-68414476 Msa1264830:intron 35.0%
! CTCGAACTGTTATTTACTTG+TGG - chr8_2:68414688-68414707 Msa1264830:five_prime_UTR 35.0%
CTGAAAATTCACGTGGTTTG+TGG - chr8_2:68409618-68409637 Msa1264830:CDS 40.0%
GTCAATGTGTTTGTGTGTGT+CGG + chr8_2:68409813-68409832 None:intergenic 40.0%
CACACATTCAATCAGAAGTG+TGG - chr8_2:68409926-68409945 Msa1264830:intron 40.0%
ACAAATTAGTATGCACCGTG+TGG + chr8_2:68409998-68410017 None:intergenic 40.0%
TCTTCAGACAAAGGTCTTTG+TGG - chr8_2:68410116-68410135 Msa1264830:intron 40.0%
! ACCAGAATTCAACTTGCTCA+AGG + chr8_2:68410177-68410196 None:intergenic 40.0%
AACTGATGCAATTGTGGATG+TGG + chr8_2:68410257-68410276 None:intergenic 40.0%
CAGGTCCTATAGTAGCAAAT+AGG + chr8_2:68410470-68410489 None:intergenic 40.0%
GTATGTCATATTGGGAGAGA+AGG - chr8_2:68410503-68410522 Msa1264830:intron 40.0%
! AAACCTGTTCAGCTTTTGTG+AGG - chr8_2:68410962-68410981 Msa1264830:intron 40.0%
TTTCCTCACAAAAGCTGAAC+AGG + chr8_2:68410968-68410987 None:intergenic 40.0%
! TGCTTTCTTTGGCAGCTTTT+GGG + chr8_2:68411014-68411033 None:intergenic 40.0%
! ATGCTTTCTTTGGCAGCTTT+TGG + chr8_2:68411015-68411034 None:intergenic 40.0%
GATAGTATAGTTGACACCGT+TGG + chr8_2:68411283-68411302 None:intergenic 40.0%
!! AATAGATGAAAGTACCTCGG+GGG + chr8_2:68411305-68411324 None:intergenic 40.0%
!! GTGCTTTTTGCCTGTTTCAA+TGG - chr8_2:68411466-68411485 Msa1264830:intron 40.0%
CTGGATTCGTATGAGATTGA+AGG - chr8_2:68411557-68411576 Msa1264830:intron 40.0%
GGATTCGTATGAGATTGAAG+GGG - chr8_2:68411559-68411578 Msa1264830:intron 40.0%
GATTCGTATGAGATTGAAGG+GGG - chr8_2:68411560-68411579 Msa1264830:intron 40.0%
TACGCAAGAAAACTGGAACT+CGG + chr8_2:68411618-68411637 None:intergenic 40.0%
TTGTACGTACGCAAGAAAAC+TGG + chr8_2:68411625-68411644 None:intergenic 40.0%
AGTACACAACGAAGTTTGTC+AGG + chr8_2:68411660-68411679 None:intergenic 40.0%
TTAGTCTAATTGCCGTACGT+AGG - chr8_2:68411710-68411729 Msa1264830:intron 40.0%
!! TGATTCTGAAGTCCTACGTA+CGG + chr8_2:68411725-68411744 None:intergenic 40.0%
! ATAAAATGCTATCTGGGACC+GGG - chr8_2:68411834-68411853 Msa1264830:intron 40.0%
! ACTTTCTCTCAGAGCATTCA+AGG - chr8_2:68412125-68412144 Msa1264830:CDS 40.0%
TTCAAGGACATGTTACCTAG+TGG - chr8_2:68412141-68412160 Msa1264830:CDS 40.0%
!! GTTGTGACCTTTTGGTTACT+AGG - chr8_2:68412204-68412223 Msa1264830:CDS 40.0%
AGAGCTTCCTAGTAACCAAA+AGG + chr8_2:68412214-68412233 None:intergenic 40.0%
TTGGTGCAGCAAAAACGTAA+GGG - chr8_2:68412336-68412355 Msa1264830:intron 40.0%
AAATTTGCCGTATTACGCAC+CGG - chr8_2:68412523-68412542 Msa1264830:CDS 40.0%
TAGCTATGATGCATAGGTAC+GGG + chr8_2:68412575-68412594 None:intergenic 40.0%
CTAGCTATGATGCATAGGTA+CGG + chr8_2:68412576-68412595 None:intergenic 40.0%
TATGCATCATAGCTAGGAAG+CGG - chr8_2:68412580-68412599 Msa1264830:intron 40.0%
CTTCTCTTGATGCTTTCTCT+CGG + chr8_2:68412625-68412644 None:intergenic 40.0%
!! GAGAGAAAGCATCAAGAGAA+GGG - chr8_2:68412624-68412643 Msa1264830:intron 40.0%
AGTTAGAGACGGGAAATTAG+AGG - chr8_2:68412828-68412847 Msa1264830:intron 40.0%
!!! AGGGGTTTTGTTCTGTAGTT+TGG - chr8_2:68412877-68412896 Msa1264830:intron 40.0%
!!! GGGGTTTTGTTCTGTAGTTT+GGG - chr8_2:68412878-68412897 Msa1264830:intron 40.0%
!! GAAAAGCGTCCATTGTCTAA+TGG - chr8_2:68413258-68413277 Msa1264830:intron 40.0%
CTGTCCTATCCATTAGACAA+TGG + chr8_2:68413270-68413289 None:intergenic 40.0%
! TTGTCTAATGGATAGGACAG+AGG - chr8_2:68413270-68413289 Msa1264830:intron 40.0%
ACAGAGGTCTTCTAAACCTT+TGG - chr8_2:68413286-68413305 Msa1264830:intron 40.0%
GTAAACACCTCTTATACTGC+AGG - chr8_2:68413665-68413684 Msa1264830:intron 40.0%
! CTATGTAGTTGGGAGTGTAA+TGG + chr8_2:68413805-68413824 None:intergenic 40.0%
GGACATACCATGACATCAAA+AGG - chr8_2:68413833-68413852 Msa1264830:intron 40.0%
! AAATGGGCCTTTTGATGTCA+TGG + chr8_2:68413843-68413862 None:intergenic 40.0%
AGGTTGGGCGTAGATAAAAT+GGG + chr8_2:68413859-68413878 None:intergenic 40.0%
AAGGTTGGGCGTAGATAAAA+TGG + chr8_2:68413860-68413879 None:intergenic 40.0%
GTCTGACCCTCACTTATAAT+AGG - chr8_2:68414176-68414195 Msa1264830:CDS 40.0%
CTTGGTTGACCAGATATTTC+TGG - chr8_2:68414570-68414589 Msa1264830:exon 40.0%
GAATCTCAAATCGATGGCGA+TGG - chr8_2:68409144-68409163 Msa1264830:three_prime_UTR 45.0%
GAGTGAGAGAGAACGAACAA+GGG + chr8_2:68409262-68409281 None:intergenic 45.0%
AGAGTGAGAGAGAACGAACA+AGG + chr8_2:68409263-68409282 None:intergenic 45.0%
AGCAACCATCTTCATAGCCT+TGG + chr8_2:68409567-68409586 None:intergenic 45.0%
! AACTACGTGCTGTTCAAACC+AGG - chr8_2:68409594-68409613 Msa1264830:CDS 45.0%
! ACTACGTGCTGTTCAAACCA+GGG - chr8_2:68409595-68409614 Msa1264830:CDS 45.0%
GTGTTTGATACCGACATGTG+TGG + chr8_2:68409877-68409896 None:intergenic 45.0%
GTATCAAACACTGACGAGTG+AGG - chr8_2:68409886-68409905 Msa1264830:intron 45.0%
TCAGACAAAGGTCTTTGTGG+TGG - chr8_2:68410119-68410138 Msa1264830:intron 45.0%
CACGTCTGTCAAGATAAGCA+GGG - chr8_2:68410151-68410170 Msa1264830:intron 45.0%
! GCCTTGAGCAAGTTGAATTC+TGG - chr8_2:68410173-68410192 Msa1264830:intron 45.0%
CATATTGGGAGAGAAGGCTA+AGG - chr8_2:68410509-68410528 Msa1264830:intron 45.0%
ATGTGGTGGTTGCTTAATGC+TGG - chr8_2:68410881-68410900 Msa1264830:intron 45.0%
TGGTTGCTTAATGCTGGCAA+GGG - chr8_2:68410887-68410906 Msa1264830:intron 45.0%
! GGCTTTAATGTCACTGGGTT+GGG + chr8_2:68410915-68410934 None:intergenic 45.0%
! AGGCTTTAATGTCACTGGGT+TGG + chr8_2:68410916-68410935 None:intergenic 45.0%
TATTTCATGTCAGGGGACCT+GGG + chr8_2:68411366-68411385 None:intergenic 45.0%
ATATTTCATGTCAGGGGACC+TGG + chr8_2:68411367-68411386 None:intergenic 45.0%
! TAAAATGCTATCTGGGACCG+GGG - chr8_2:68411835-68411854 Msa1264830:intron 45.0%
GTTGTGTGGAGGGATAGATA+TGG + chr8_2:68411959-68411978 None:intergenic 45.0%
ATAGGAAGCGGAAAGTTGTG+TGG + chr8_2:68411973-68411992 None:intergenic 45.0%
AAGCATGCGTACTCCAAACA+TGG - chr8_2:68412235-68412254 Msa1264830:intron 45.0%
! CTCCAAACATGGAGAAGTAC+CGG - chr8_2:68412246-68412265 Msa1264830:intron 45.0%
!! TCCAAACATGGAGAAGTACC+GGG - chr8_2:68412247-68412266 Msa1264830:intron 45.0%
GTTGGTGCAGCAAAAACGTA+AGG - chr8_2:68412335-68412354 Msa1264830:intron 45.0%
AAATGAAGGTCCAGGTACGT+TGG + chr8_2:68412499-68412518 None:intergenic 45.0%
ATGATGCATAGGTACGGGTA+CGG + chr8_2:68412570-68412589 None:intergenic 45.0%
CGTACCTATGCATCATAGCT+AGG - chr8_2:68412574-68412593 Msa1264830:intron 45.0%
GCTTCCTAGCTATGATGCAT+AGG + chr8_2:68412581-68412600 None:intergenic 45.0%
!! CGAGAGAAAGCATCAAGAGA+AGG - chr8_2:68412623-68412642 Msa1264830:intron 45.0%
! TTGAGGCATTTGAGAGACCT+GGG + chr8_2:68412912-68412931 None:intergenic 45.0%
! GCGTCCATTGTCTAATGGAT+AGG - chr8_2:68413263-68413282 Msa1264830:intron 45.0%
TCACAACCCTGCAGTATAAG+AGG + chr8_2:68413675-68413694 None:intergenic 45.0%
CTTGACAGGTCACTACTTTG+TGG + chr8_2:68413715-68413734 None:intergenic 45.0%
! AGAGGTGTACTTGGACTCTT+GGG + chr8_2:68413775-68413794 None:intergenic 45.0%
! TGTAGTTGGGAGTGTAATGG+AGG + chr8_2:68413802-68413821 None:intergenic 45.0%
! TTTCAAGGCGAAACTAGCCT+TGG - chr8_2:68414541-68414560 Msa1264830:CDS 45.0%
!! TTCAAGGCGAAACTAGCCTT+GGG - chr8_2:68414542-68414561 Msa1264830:CDS 45.0%
!! AACTAGCCTTGGGGATTTCT+TGG - chr8_2:68414552-68414571 Msa1264830:CDS 45.0%
!! GAATAAAAAAATAAAAAATT+AGG + chr8_2:68409422-68409441 None:intergenic 5.0%
!!! TTGTTTATATAAATTTTATA+AGG - chr8_2:68413039-68413058 Msa1264830:intron 5.0%
TCGCTGAGAGAGAGAAAGAG+AGG + chr8_2:68409115-68409134 None:intergenic 50.0%
GGTGGTTGAGAAGACATGAG+AGG + chr8_2:68409205-68409224 None:intergenic 50.0%
!! GATCGGAGAGTGGTGTTGAT+TGG + chr8_2:68409226-68409245 None:intergenic 50.0%
AGGGAGAGATGAGAGGAGAT+CGG + chr8_2:68409243-68409262 None:intergenic 50.0%
ACGAACAAGGGAGAGATGAG+AGG + chr8_2:68409250-68409269 None:intergenic 50.0%
ACCAGGGCTGAAAATTCACG+TGG - chr8_2:68409611-68409630 Msa1264830:CDS 50.0%
! ACCACGTGAATTTTCAGCCC+TGG + chr8_2:68409615-68409634 None:intergenic 50.0%
CAGCCATTTACCGCTCTTCT+CGG - chr8_2:68409641-68409660 Msa1264830:CDS 50.0%
! GTCGGTGCTTCATTGGTGAA+GGG + chr8_2:68409795-68409814 None:intergenic 50.0%
! TGTCGGTGCTTCATTGGTGA+AGG + chr8_2:68409796-68409815 None:intergenic 50.0%
! TGTGTGTGTCGGTGCTTCAT+TGG + chr8_2:68409802-68409821 None:intergenic 50.0%
CCTGCTTATCTTGACAGACG+TGG + chr8_2:68410153-68410172 None:intergenic 50.0%
CCACGTCTGTCAAGATAAGC+AGG - chr8_2:68410150-68410169 Msa1264830:intron 50.0%
GTGGTTGCTTAATGCTGGCA+AGG - chr8_2:68410886-68410905 Msa1264830:intron 50.0%
ACGTGGAGTATGATGCACTG+AGG - chr8_2:68411218-68411237 Msa1264830:intron 50.0%
GTCAACTATACTATCCCCCG+AGG - chr8_2:68411288-68411307 Msa1264830:intron 50.0%
GTTGAAAGAGAGGCTGAAGC+TGG - chr8_2:68411518-68411537 Msa1264830:intron 50.0%
ACCGGGGTGAAATCCATAAC+AGG - chr8_2:68411851-68411870 Msa1264830:intron 50.0%
CCCTGTTATGGATTTCACCC+CGG + chr8_2:68411855-68411874 None:intergenic 50.0%
CCGGGGTGAAATCCATAACA+GGG - chr8_2:68411852-68411871 Msa1264830:intron 50.0%
CAAATAGCCAGGTAGGAGCT+AGG + chr8_2:68411927-68411946 None:intergenic 50.0%
CTAGCTCCTACCTGGCTATT+TGG - chr8_2:68411925-68411944 Msa1264830:intron 50.0%
GAAGCGGAAAGTTGTGTGGA+GGG + chr8_2:68411969-68411988 None:intergenic 50.0%
ACCCGGTACTTCTCCATGTT+TGG + chr8_2:68412251-68412270 None:intergenic 50.0%
!! ATGGGTACCGGTGCGTAATA+CGG + chr8_2:68412533-68412552 None:intergenic 50.0%
CTAGGAAGCGGTCAAAGCAT+AGG - chr8_2:68412592-68412611 Msa1264830:intron 50.0%
GAAGCGGTCAAAGCATAGGA+AGG - chr8_2:68412596-68412615 Msa1264830:intron 50.0%
CATTTGAGAGACCTGGGATC+TGG + chr8_2:68412906-68412925 None:intergenic 50.0%
! CTTGAGGCATTTGAGAGACC+TGG + chr8_2:68412913-68412932 None:intergenic 50.0%
TGTACTTGGACTCTTGGGGA+AGG + chr8_2:68413770-68413789 None:intergenic 50.0%
GAGGTGTACTTGGACTCTTG+GGG + chr8_2:68413774-68413793 None:intergenic 50.0%
! CAGAGGTGTACTTGGACTCT+TGG + chr8_2:68413776-68413795 None:intergenic 50.0%
! AGTTGGGAGTGTAATGGAGG+AGG + chr8_2:68413799-68413818 None:intergenic 50.0%
GGTCATGTTCAATGCGGTGT+TGG - chr8_2:68414075-68414094 Msa1264830:CDS 50.0%
ATTCCTGCTAGAGCTGTCCA+TGG + chr8_2:68414137-68414156 None:intergenic 50.0%
! ACAGCTCTAGCAGGAATGCT+GGG - chr8_2:68414140-68414159 Msa1264830:CDS 50.0%
!! TCAAGGCGAAACTAGCCTTG+GGG - chr8_2:68414543-68414562 Msa1264830:CDS 50.0%
GGTCAACCAAGAAATCCCCA+AGG + chr8_2:68414561-68414580 None:intergenic 50.0%
!! CGGAGAGTGGTGTTGATTGG+TGG + chr8_2:68409223-68409242 None:intergenic 55.0%
GATGAGAGGAGATCGGAGAG+TGG + chr8_2:68409236-68409255 None:intergenic 55.0%
TCGCCGAGAAGAGCGGTAAA+TGG + chr8_2:68409647-68409666 None:intergenic 55.0%
TGTAGCATCGCCGAGAAGAG+CGG + chr8_2:68409654-68409673 None:intergenic 55.0%
GAAAGAGAGGCTGAAGCTGG+AGG - chr8_2:68411521-68411540 Msa1264830:intron 55.0%
GCTGAAGCTGGAGGAAGTCT+CGG - chr8_2:68411530-68411549 Msa1264830:intron 55.0%
TGGAGGAAGTCTCGGTGAAC+TGG - chr8_2:68411538-68411557 Msa1264830:intron 55.0%
CCAGGTAGGAGCTAGGTTAG+AGG + chr8_2:68411920-68411939 None:intergenic 55.0%
CCTCTAACCTAGCTCCTACC+TGG - chr8_2:68411917-68411936 Msa1264830:intron 55.0%
GGAAGCGGAAAGTTGTGTGG+AGG + chr8_2:68411970-68411989 None:intergenic 55.0%
!! AGAAGTACCGGGTACGCGTA+TGG - chr8_2:68412258-68412277 Msa1264830:intron 55.0%
ACGAGTACCATACGCGTACC+CGG + chr8_2:68412268-68412287 None:intergenic 55.0%
ATAGGTACGGGTACGGTACC+CGG + chr8_2:68412563-68412582 None:intergenic 55.0%
TAGTTTGGGAGCCAGATCCC+AGG - chr8_2:68412892-68412911 Msa1264830:intron 55.0%
TTGGACTCTTGGGGAAGGAC+GGG + chr8_2:68413765-68413784 None:intergenic 55.0%
CTTGGACTCTTGGGGAAGGA+CGG + chr8_2:68413766-68413785 None:intergenic 55.0%
! GAGTGTAATGGAGGAGGCAG+AGG + chr8_2:68413793-68413812 None:intergenic 55.0%
GAGAATGCCTGCAGTGAGCA+AGG - chr8_2:68414097-68414116 Msa1264830:CDS 55.0%
AGGAGCAAGGATGTCTGCCA+TGG - chr8_2:68414117-68414136 Msa1264830:CDS 55.0%
! GACAGCTCTAGCAGGAATGC+TGG - chr8_2:68414139-68414158 Msa1264830:CDS 55.0%
! CAGCTCTAGCAGGAATGCTG+GGG - chr8_2:68414141-68414160 Msa1264830:CDS 55.0%
!! TCTGGAGCATCAGCACTGAC+AGG - chr8_2:68414392-68414411 Msa1264830:intron 55.0%
CCAAACGCTTCCCTTCGCGT+CGG + chr8_2:68409180-68409199 None:intergenic 60.0%
ACCGGTACCCATACCCGTAC+CGG - chr8_2:68412541-68412560 Msa1264830:intron 60.0%
ACGGTACCCGGTACGGGTAT+GGG + chr8_2:68412551-68412570 None:intergenic 60.0%
TACGGTACCCGGTACGGGTA+TGG + chr8_2:68412552-68412571 None:intergenic 60.0%
TACGGGTACGGTACCCGGTA+CGG + chr8_2:68412558-68412577 None:intergenic 60.0%
!! GAAGGACGGGGCTTTTGGGA+AGG + chr8_2:68413752-68413771 None:intergenic 60.0%
! TGGGGAAGGACGGGGCTTTT+GGG + chr8_2:68413756-68413775 None:intergenic 60.0%
! TTGGGGAAGGACGGGGCTTT+TGG + chr8_2:68413757-68413776 None:intergenic 60.0%
TGGACTCTTGGGGAAGGACG+GGG + chr8_2:68413764-68413783 None:intergenic 60.0%
! GGAGGAGGCAGAGGTGTACT+TGG + chr8_2:68413784-68413803 None:intergenic 60.0%
CCTTGCTCCTTGCTCACTGC+AGG + chr8_2:68414107-68414126 None:intergenic 60.0%
CCTGCAGTGAGCAAGGAGCA+AGG - chr8_2:68414104-68414123 Msa1264830:CDS 60.0%
! CTGCCATGGACAGCTCTAGC+AGG - chr8_2:68414131-68414150 Msa1264830:CDS 60.0%
CTGCTGCACTCCGACGCGAA+GGG - chr8_2:68409167-68409186 Msa1264830:three_prime_UTR 65.0%
!! CCGACGCGAAGGGAAGCGTT+TGG - chr8_2:68409177-68409196 Msa1264830:three_prime_UTR 65.0%
CCCGGTACGGGTATGGGTAC+CGG + chr8_2:68412545-68412564 None:intergenic 65.0%
CCGGTACCCATACCCGTACC+GGG - chr8_2:68412542-68412561 Msa1264830:intron 65.0%
ACGGGTACGGTACCCGGTAC+GGG + chr8_2:68412557-68412576 None:intergenic 65.0%
GCTGCTGCACTCCGACGCGA+AGG - chr8_2:68409166-68409185 Msa1264830:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 68408993 68414745 68408993 ID=Msa1264830;Name=Msa1264830
chr8_2 mRNA 68408993 68414745 68408993 ID=Msa1264830-mRNA-1;Parent=Msa1264830;Name=Msa1264830-mRNA-1;_AED=0.07;_eAED=0.07;_QI=164|1|1|1|1|1|9|327|327
chr8_2 exon 68408993 68409389 68408993 ID=Msa1264830-mRNA-1:exon:22693;Parent=Msa1264830-mRNA-1
chr8_2 exon 68409541 68409662 68409541 ID=Msa1264830-mRNA-1:exon:22692;Parent=Msa1264830-mRNA-1
chr8_2 exon 68412104 68412223 68412104 ID=Msa1264830-mRNA-1:exon:22691;Parent=Msa1264830-mRNA-1
chr8_2 exon 68412429 68412551 68412429 ID=Msa1264830-mRNA-1:exon:22690;Parent=Msa1264830-mRNA-1
chr8_2 exon 68413127 68413254 68413127 ID=Msa1264830-mRNA-1:exon:22689;Parent=Msa1264830-mRNA-1
chr8_2 exon 68413544 68413657 68413544 ID=Msa1264830-mRNA-1:exon:22688;Parent=Msa1264830-mRNA-1
chr8_2 exon 68414064 68414216 68414064 ID=Msa1264830-mRNA-1:exon:22687;Parent=Msa1264830-mRNA-1
chr8_2 exon 68414344 68414390 68414344 ID=Msa1264830-mRNA-1:exon:22686;Parent=Msa1264830-mRNA-1
chr8_2 exon 68414475 68414745 68414475 ID=Msa1264830-mRNA-1:exon:22685;Parent=Msa1264830-mRNA-1
chr8_2 five_prime_UTR 68414582 68414745 68414582 ID=Msa1264830-mRNA-1:five_prime_utr;Parent=Msa1264830-mRNA-1
chr8_2 CDS 68414475 68414581 68414475 ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1
chr8_2 CDS 68414344 68414390 68414344 ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1
chr8_2 CDS 68414064 68414216 68414064 ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1
chr8_2 CDS 68413544 68413657 68413544 ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1
chr8_2 CDS 68413127 68413254 68413127 ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1
chr8_2 CDS 68412429 68412551 68412429 ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1
chr8_2 CDS 68412104 68412223 68412104 ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1
chr8_2 CDS 68409541 68409662 68409541 ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1
chr8_2 CDS 68409320 68409389 68409320 ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1
chr8_2 three_prime_UTR 68408993 68409319 68408993 ID=Msa1264830-mRNA-1:three_prime_utr;Parent=Msa1264830-mRNA-1
Gene Sequence

>Msa1264830

ATGGCGATGGCTGCTGCACTCCGACGCGAAGGGAAGCGTTTGGCTCCTCTCATGTCTTCTCAACCACCAATCAACACCACTCTCCGATCTCCTCTCATCTCTCCCTTAGATCAATCTTCTATTGGAGGAGCTCGTACTATTTCCACTCAAATTGTGAGAAATCGGATGAAGAGTGTCAAGAATATTCAGAAAATTACCAAGGCTATGAAGATGGTTGCTGCGTCTAAACTACGTGCTGTTCAAACCAGGGCTGAAAATTCACGTGGTTTGTGGCAGCCATTTACCGCTCTTCTCGGCGATGCTACAAGCGTTGATGTCAAGAAGAATGTTGTAATTACCGTTTCTTCAGACAAAGGTCTTTGTGGTGGAATCAACTCCACGTCTGTCAAGATAAGCAGGGCCTTGAGCAAGTTGAATTCTGGACCTGATAAAGAGACAAAGTATGTCATATTGGGAGAGAAGGCTAAGGCTCAGTTGATTCGTGACTCAAAGAAAGACATTGCACTTAGCTTAACTGAGATACAAAAGAATCCTCTGAATTATACTCAGGTTTCTGTCTTGGCTGATGACATTCTGAAAAACGTGGAGTATGATGCACTGAGGATTGTTTTCAACAGATTTCAATCCGTTGTACAATTTCTACCAACGGTGTCAACTATACTATCCCCCGAGATTGTTGAAAGAGAGGCTGAAGCTGGAGGAAGTCTCGGTGAACTGGATTCGTATGAGATTGAAGGGGGTGACACAAAATCAGAAATTCTTCAGAATCTGACCGAGTTCCAGTTTTCTTGCGTCATGTTCAATGCGGTGTTGGAGAATGCCTGCAGTGAGCAAGGAGCAAGGATGTCTGCCATGGACAGCTCTAGCAGGAATGCTGGGGATATGCTTGATCGTCTGACCCTCACTTATAATAGAACTCGTCAAGCATCAATTACCACCGAATTGATTGAGATTATCTCTGGAGCATCAGCACTGACAGGTTAA

Protein sequence

>Msa1264830

MAMAAALRREGKRLAPLMSSQPPINTTLRSPLISPLDQSSIGGARTISTQIVRNRMKSVKNIQKITKAMKMVAASKLRAVQTRAENSRGLWQPFTALLGDATSVDVKKNVVITVSSDKGLCGGINSTSVKISRALSKLNSGPDKETKYVILGEKAKAQLIRDSKKDIALSLTEIQKNPLNYTQVSVLADDILKNVEYDALRIVFNRFQSVVQFLPTVSTILSPEIVEREAEAGGSLGELDSYEIEGGDTKSEILQNLTEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGDMLDRLTLTYNRTRQASITTELIEIISGASALTG*