Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1264830 | XP_013458562.1 | 99.388 | 327 | 2 | 0 | 1 | 327 | 1 | 327 | 0.0 | 659 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1264830 | sp|P26360|ATPG3_IPOBA | 81.707 | 328 | 57 | 3 | 1 | 327 | 1 | 326 | 0.0 | 549 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0108750 | Msa1264830 | 0.839329 | 1.691674e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1264830 | MtrunA17_Chr4g0073341 | 99.388 | 327 | 2 | 0 | 1 | 327 | 1 | 327 | 0.0 | 659 |
| Msa1264830 | MtrunA17_Chr2g0288451 | 28.455 | 369 | 200 | 10 | 17 | 325 | 9 | 373 | 1.96e-26 | 107 |
| Msa1264830 | MtrunA17_Chr3g0099081 | 28.261 | 322 | 179 | 10 | 52 | 325 | 30 | 347 | 1.11e-25 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1264830 | AT2G33040.1 | 78.769 | 325 | 65 | 3 | 1 | 325 | 1 | 321 | 0.0 | 522 |
| Msa1264830 | AT4G04640.1 | 29.296 | 355 | 191 | 9 | 15 | 324 | 32 | 371 | 1.62e-30 | 119 |
| Msa1264830 | AT1G15700.1 | 28.000 | 325 | 176 | 9 | 52 | 325 | 66 | 383 | 1.41e-25 | 105 |
Find 94 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGTTGACCAGATATTTC+TGG | 0.183476 | 8_2:-68409146 | Msa1264830:three_prime_UTR |
| AAACGATTATTATTATAAAA+AGG | 0.224110 | 8_2:+68409195 | None:intergenic |
| CAAAGGCCAATAGTTATTAT+TGG | 0.237572 | 8_2:+68409054 | None:intergenic |
| CGTACTATTTCCACTCAAAT+TGG | 0.238116 | 8_2:-68414343 | Msa1264830:intron |
| ACATACTTTGTCTCTTTATC+AGG | 0.264351 | 8_2:+68413230 | None:intergenic |
| GCCTTGAGCAAGTTGAATTC+TGG | 0.280287 | 8_2:-68413543 | Msa1264830:intron |
| AACTAGCCTTGGGGATTTCT+TGG | 0.282149 | 8_2:-68409164 | Msa1264830:three_prime_UTR |
| TACAGAGATCAATCTTCTAT+TGG | 0.285686 | 8_2:-68414373 | Msa1264830:intron |
| TTATTTCCAATAATAACTAT+TGG | 0.339761 | 8_2:-68409060 | Msa1264830:three_prime_UTR |
| AGAGACAAAGTATGTCATAT+TGG | 0.347992 | 8_2:-68413222 | Msa1264830:CDS |
| TTGTACGTACGCAAGAAAAC+TGG | 0.369183 | 8_2:+68412094 | None:intergenic |
| GTCTGACCCTCACTTATAAT+AGG | 0.386053 | 8_2:-68409540 | Msa1264830:intron |
| GAGACAAAGTATGTCATATT+GGG | 0.404543 | 8_2:-68413221 | Msa1264830:CDS |
| TTATAATAATAATCGTTTCA+AGG | 0.413740 | 8_2:-68409190 | Msa1264830:three_prime_UTR |
| TTGTAGGTGTTATTTGGGCA+AGG | 0.419437 | 8_2:+68408980 | None:intergenic |
| CTGAAAATTCACGTGGTTTG+TGG | 0.419923 | 8_2:-68414098 | Msa1264830:CDS |
| AAAACAATTCCAGAAATATC+TGG | 0.429809 | 8_2:+68409137 | None:intergenic |
| GACAGCTCTAGCAGGAATGC+TGG | 0.431443 | 8_2:-68409577 | Msa1264830:CDS |
| TTCAAGGCGAAACTAGCCTT+GGG | 0.435586 | 8_2:-68409174 | Msa1264830:three_prime_UTR |
| TGGAGGAAGTCTCGGTGAAC+TGG | 0.443236 | 8_2:-68412178 | Msa1264830:CDS |
| CCTTGCTCCTTGCTCACTGC+AGG | 0.446628 | 8_2:+68409612 | None:intergenic |
| CAGCCATTTACCGCTCTTCT+CGG | 0.447516 | 8_2:-68414075 | Msa1264830:CDS |
| GAATTGATTGAGATTATCTC+TGG | 0.457104 | 8_2:-68409342 | Msa1264830:CDS |
| TGTAGGTGTTATTTGGGCAA+GGG | 0.459087 | 8_2:+68408981 | None:intergenic |
| TTGTTTGTGCAGTGAGAAAT+CGG | 0.465696 | 8_2:-68414206 | Msa1264830:intron |
| ATGACGATATTGAGATATAT+CGG | 0.467507 | 8_2:-68409263 | Msa1264830:three_prime_UTR |
| TCTTCAGACAAAGGTCTTTG+TGG | 0.469713 | 8_2:-68413600 | Msa1264830:CDS |
| GATCGGAGAGTGGTGTTGAT+TGG | 0.474940 | 8_2:+68414493 | None:intergenic |
| AGAGATCAATCTTCTATTGG+AGG | 0.475794 | 8_2:-68414370 | Msa1264830:CDS |
| AGAGATAATCTCAATCAATT+CGG | 0.476977 | 8_2:+68409344 | None:intergenic |
| AAGACCTTTGTCTGAAGAAA+CGG | 0.482952 | 8_2:+68413605 | None:intergenic |
| CTGGATTCGTATGAGATTGA+AGG | 0.483416 | 8_2:-68412159 | Msa1264830:CDS |
| CGATATTGAGATATATCGGT+TGG | 0.487663 | 8_2:-68409259 | Msa1264830:three_prime_UTR |
| CTCGAACTGTTATTTACTTG+TGG | 0.488869 | 8_2:-68409028 | Msa1264830:three_prime_UTR |
| CCACGTCTGTCAAGATAAGC+AGG | 0.495862 | 8_2:-68413566 | Msa1264830:CDS |
| ACAGCTCTAGCAGGAATGCT+GGG | 0.501839 | 8_2:-68409576 | Msa1264830:CDS |
| AGCAACCATCTTCATAGCCT+TGG | 0.502533 | 8_2:+68414152 | None:intergenic |
| CATGTAGATTGTTGAAAGAG+AGG | 0.506420 | 8_2:-68412208 | Msa1264830:intron |
| GTTGAAAGAGAGGCTGAAGC+TGG | 0.508534 | 8_2:-68412198 | Msa1264830:CDS |
| CGGAGAGTGGTGTTGATTGG+TGG | 0.512550 | 8_2:+68414496 | None:intergenic |
| TTTCAAGGCGAAACTAGCCT+TGG | 0.515698 | 8_2:-68409175 | Msa1264830:three_prime_UTR |
| AACTACGTGCTGTTCAAACC+AGG | 0.516036 | 8_2:-68414122 | Msa1264830:CDS |
| GATGAGAGGAGATCGGAGAG+TGG | 0.516462 | 8_2:+68414483 | None:intergenic |
| CCGACGCGAAGGGAAGCGTT+TGG | 0.523663 | 8_2:-68414539 | Msa1264830:CDS |
| CTGCCATGGACAGCTCTAGC+AGG | 0.525991 | 8_2:-68409585 | Msa1264830:CDS |
| GCTGAAGCTGGAGGAAGTCT+CGG | 0.540570 | 8_2:-68412186 | Msa1264830:CDS |
| TCTGGAGCATCAGCACTGAC+AGG | 0.540615 | 8_2:-68409324 | Msa1264830:CDS |
| GCTGCTGCACTCCGACGCGA+AGG | 0.542082 | 8_2:-68414550 | Msa1264830:CDS |
| AATTACCAAGGCTATGAAGA+TGG | 0.547208 | 8_2:-68414157 | Msa1264830:CDS |
| TGGATTCGTATGAGATTGAA+GGG | 0.556021 | 8_2:-68412158 | Msa1264830:CDS |
| TCAGACAAAGGTCTTTGTGG+TGG | 0.558554 | 8_2:-68413597 | Msa1264830:CDS |
| GTATGTCATATTGGGAGAGA+AGG | 0.558989 | 8_2:-68413213 | Msa1264830:CDS |
| AATGAAAGTACCAATTTGAG+TGG | 0.565521 | 8_2:+68414333 | None:intergenic |
| GAGAATGCCTGCAGTGAGCA+AGG | 0.566041 | 8_2:-68409619 | Msa1264830:CDS |
| AAAGATACCTATTATAAGTG+AGG | 0.568709 | 8_2:+68409533 | None:intergenic |
| CTGCTGCACTCCGACGCGAA+GGG | 0.583053 | 8_2:-68414549 | Msa1264830:CDS |
| AAGATACCTATTATAAGTGA+GGG | 0.587593 | 8_2:+68409534 | None:intergenic |
| GGTCATGTTCAATGCGGTGT+TGG | 0.590854 | 8_2:-68409641 | Msa1264830:CDS |
| CGTTGTACAATTTCTACCAA+CGG | 0.590879 | 8_2:-68412452 | Msa1264830:CDS |
| AGGAGCAAGGATGTCTGCCA+TGG | 0.594950 | 8_2:-68409599 | Msa1264830:CDS |
| AGGGAGAGATGAGAGGAGAT+CGG | 0.599654 | 8_2:+68414476 | None:intergenic |
| ACGAAAGAATCTCAAATCGA+TGG | 0.600840 | 8_2:-68414578 | Msa1264830:exon |
| GAATCTCAAATCGATGGCGA+TGG | 0.602234 | 8_2:-68414572 | Msa1264830:exon |
| AATAACAGTTCGAGAAACAA+AGG | 0.603461 | 8_2:+68409037 | None:intergenic |
| GATAATCTCAATCAATTCGG+TGG | 0.603991 | 8_2:+68409347 | None:intergenic |
| GAATCCTCTGAATTATACTC+AGG | 0.606536 | 8_2:-68413126 | Msa1264830:intron |
| TGTAGCATCGCCGAGAAGAG+CGG | 0.607988 | 8_2:+68414065 | None:intergenic |
| ATTACCGTTTCTTCAGACAA+AGG | 0.610426 | 8_2:-68413609 | Msa1264830:CDS |
| ACGAACAAGGGAGAGATGAG+AGG | 0.612203 | 8_2:+68414469 | None:intergenic |
| ATTCCTGCTAGAGCTGTCCA+TGG | 0.613830 | 8_2:+68409582 | None:intergenic |
| GAAAGAGAGGCTGAAGCTGG+AGG | 0.621120 | 8_2:-68412195 | Msa1264830:CDS |
| CCTGCAGTGAGCAAGGAGCA+AGG | 0.624108 | 8_2:-68409612 | Msa1264830:CDS |
| CTAACCTGAGTATAATTCAG+AGG | 0.633689 | 8_2:+68413122 | None:intergenic |
| TCGCTGAGAGAGAGAAAGAG+AGG | 0.639910 | 8_2:+68414604 | None:intergenic |
| CAGCTCTAGCAGGAATGCTG+GGG | 0.652373 | 8_2:-68409575 | Msa1264830:CDS |
| CATATTGGGAGAGAAGGCTA+AGG | 0.655816 | 8_2:-68413207 | Msa1264830:CDS |
| CCTGCTTATCTTGACAGACG+TGG | 0.656536 | 8_2:+68413566 | None:intergenic |
| ACCAGAATTCAACTTGCTCA+AGG | 0.662579 | 8_2:+68413542 | None:intergenic |
| TACGCAAGAAAACTGGAACT+CGG | 0.672354 | 8_2:+68412101 | None:intergenic |
| CACGTCTGTCAAGATAAGCA+GGG | 0.673248 | 8_2:-68413565 | Msa1264830:CDS |
| GAATATTCAGAAAATTACCA+AGG | 0.679225 | 8_2:-68414169 | Msa1264830:CDS |
| CCAAACGCTTCCCTTCGCGT+CGG | 0.680197 | 8_2:+68414539 | None:intergenic |
| ACCAGGGCTGAAAATTCACG+TGG | 0.682606 | 8_2:-68414105 | Msa1264830:CDS |
| TCAAGGCGAAACTAGCCTTG+GGG | 0.682760 | 8_2:-68409173 | Msa1264830:three_prime_UTR |
| GATAGTATAGTTGACACCGT+TGG | 0.683787 | 8_2:+68412436 | None:intergenic |
| GGTGGTTGAGAAGACATGAG+AGG | 0.688310 | 8_2:+68414514 | None:intergenic |
| GGATTCGTATGAGATTGAAG+GGG | 0.696951 | 8_2:-68412157 | Msa1264830:CDS |
| ACTACGTGCTGTTCAAACCA+GGG | 0.699734 | 8_2:-68414121 | Msa1264830:CDS |
| GATTCGTATGAGATTGAAGG+GGG | 0.707101 | 8_2:-68412156 | Msa1264830:CDS |
| CGTTGGTAGAAATTGTACAA+CGG | 0.712891 | 8_2:+68412453 | None:intergenic |
| GGTCAACCAAGAAATCCCCA+AGG | 0.725747 | 8_2:+68409158 | None:intergenic |
| TATATAGGTCATGTTCAATG+CGG | 0.738383 | 8_2:-68409647 | Msa1264830:intron |
| AATAGATGAAAGTACCTCGG+GGG | 0.741176 | 8_2:+68412414 | None:intergenic |
| ACGTGGAGTATGATGCACTG+AGG | 0.781586 | 8_2:-68412498 | Msa1264830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAAATAAAAAATTA+GGG | + | chr8_2:68409421-68409440 | None:intergenic | 0.0% |
| !! | TACGAATATAATTAATATAT+AGG | + | chr8_2:68413369-68413388 | None:intergenic | 10.0% |
| !! | ACTAATTATGAATATAATAA+AGG | - | chr8_2:68413501-68413520 | Msa1264830:intron | 10.0% |
| !! | AAACGATTATTATTATAAAA+AGG | + | chr8_2:68414524-68414543 | None:intergenic | 10.0% |
| !!! | ATTAAATTTTGATTGTGTTA+TGG | - | chr8_2:68409477-68409496 | Msa1264830:intron | 15.0% |
| !! | CAAATTGTAACAAAATAAAA+AGG | + | chr8_2:68409700-68409719 | None:intergenic | 15.0% |
| !!! | AAATATTTTGAGATAAAATC+CGG | - | chr8_2:68410425-68410444 | Msa1264830:intron | 15.0% |
| !!! | ATTCCTTAACAATTTAATTT+AGG | + | chr8_2:68410673-68410692 | None:intergenic | 15.0% |
| !! | TTAAGGAATATTGAAAAATA+TGG | - | chr8_2:68410684-68410703 | Msa1264830:intron | 15.0% |
| !!! | ATGTTTAAATAGCTTATTTT+GGG | + | chr8_2:68411043-68411062 | None:intergenic | 15.0% |
| !!! | AATGTTTAAATAGCTTATTT+TGG | + | chr8_2:68411044-68411063 | None:intergenic | 15.0% |
| !! | AACAATTAAAACTAAACAAT+GGG | + | chr8_2:68411157-68411176 | None:intergenic | 15.0% |
| !! | AAATTATATACTACAACATT+CGG | - | chr8_2:68412741-68412760 | Msa1264830:intron | 15.0% |
| !! | TATACTTTATTGTTGTATAT+AGG | - | chr8_2:68414054-68414073 | Msa1264830:intron | 15.0% |
| !! | TTATAATAATAATCGTTTCA+AGG | - | chr8_2:68414526-68414545 | Msa1264830:CDS | 15.0% |
| !! | TTATTTCCAATAATAACTAT+TGG | - | chr8_2:68414656-68414675 | Msa1264830:five_prime_UTR | 15.0% |
| !!! | TCTTAGATTTTTGATGAATT+AGG | - | chr8_2:68409445-68409464 | Msa1264830:intron | 20.0% |
| !! | TTGTATGATTGTGTAATAAT+TGG | - | chr8_2:68409744-68409763 | Msa1264830:intron | 20.0% |
| !! | AGTCCTAAATTAAATTGTTA+AGG | - | chr8_2:68410667-68410686 | Msa1264830:intron | 20.0% |
| !! | AGATATATATGTAAAACACA+AGG | + | chr8_2:68410752-68410771 | None:intergenic | 20.0% |
| !! | TAGAAAACAAAGTTTATAAG+TGG | - | chr8_2:68410771-68410790 | Msa1264830:intron | 20.0% |
| !! | TCTTTATAACAAACTAATTC+AGG | + | chr8_2:68410798-68410817 | None:intergenic | 20.0% |
| !! | TCATTTATTCAACAACAAAA+AGG | + | chr8_2:68410936-68410955 | None:intergenic | 20.0% |
| !!! | TGTTTAAATAGCTTATTTTG+GGG | + | chr8_2:68411042-68411061 | None:intergenic | 20.0% |
| !! | CAACAATTAAAACTAAACAA+TGG | + | chr8_2:68411158-68411177 | None:intergenic | 20.0% |
| !!! | GTTTTAATTGTTGTATTTTC+AGG | - | chr8_2:68411165-68411184 | Msa1264830:intron | 20.0% |
| !!! | TATTGCAAAATAAGTTTTCA+TGG | + | chr8_2:68411431-68411450 | None:intergenic | 20.0% |
| !!! | AAAACTTATTTTGCAATATC+AGG | - | chr8_2:68411433-68411452 | Msa1264830:intron | 20.0% |
| !! | TAGAATATAAAATGCTATCT+GGG | - | chr8_2:68411828-68411847 | Msa1264830:intron | 20.0% |
| !! | TTAAGATGATTATGATTTCA+TGG | - | chr8_2:68412024-68412043 | Msa1264830:intron | 20.0% |
| !!! | TTTTGATCAAAATAGTAGAA+GGG | - | chr8_2:68412388-68412407 | Msa1264830:intron | 20.0% |
| !! | AAGTATAAAAGAAACGAAAA+AGG | + | chr8_2:68413004-68413023 | None:intergenic | 20.0% |
| !! | CAATTGCAATAAAATTGATA+TGG | + | chr8_2:68413346-68413365 | None:intergenic | 20.0% |
| !! | TTTATCATTATAAACTTGAC+AGG | + | chr8_2:68413729-68413748 | None:intergenic | 20.0% |
| !! | ATAAGTATAATTTGAAAGAG+AGG | + | chr8_2:68414029-68414048 | None:intergenic | 20.0% |
| !!! | TTTAGACAAAATTTTTGTTC+TGG | - | chr8_2:68414244-68414263 | Msa1264830:intron | 20.0% |
| ! | AGAACTGTATTAAAAAGCTA+GGG | - | chr8_2:68409087-68409106 | Msa1264830:three_prime_UTR | 25.0% |
| ! | AATGAAGAGGTTAATTGAAA+AGG | + | chr8_2:68409313-68409332 | None:intergenic | 25.0% |
| ! | GTAATAGAAATGAAATGAAG+AGG | + | chr8_2:68409326-68409345 | None:intergenic | 25.0% |
| ! | GAATATTCAGAAAATTACCA+AGG | - | chr8_2:68409547-68409566 | Msa1264830:CDS | 25.0% |
| ! | TCCTATTCATCAAAAATCAA+GGG | + | chr8_2:68409970-68409989 | None:intergenic | 25.0% |
| ! | TTCCTATTCATCAAAAATCA+AGG | + | chr8_2:68409971-68409990 | None:intergenic | 25.0% |
| ! | AACGCCTAAAAGAATATAAA+CGG | + | chr8_2:68410066-68410085 | None:intergenic | 25.0% |
| !! | TGTGAAATACTGTTTTCATT+TGG | - | chr8_2:68410354-68410373 | Msa1264830:intron | 25.0% |
| ! | CTAGATATATGTAAAACACA+AGG | + | chr8_2:68410636-68410655 | None:intergenic | 25.0% |
| !! | TTTTCTGACTGAATATAATG+TGG | - | chr8_2:68410864-68410883 | Msa1264830:intron | 25.0% |
| ! | AGCTATTTAAACATTCATTG+TGG | - | chr8_2:68411049-68411068 | Msa1264830:intron | 25.0% |
| ! | GCTATTTAAACATTCATTGT+GGG | - | chr8_2:68411050-68411069 | Msa1264830:intron | 25.0% |
| !!! | TTTAATAGATGAAAGTACCT+CGG | + | chr8_2:68411308-68411327 | None:intergenic | 25.0% |
| ! | CTAATTCAAATTGACGAAAT+GGG | + | chr8_2:68411694-68411713 | None:intergenic | 25.0% |
| ! | ACTAATTCAAATTGACGAAA+TGG | + | chr8_2:68411695-68411714 | None:intergenic | 25.0% |
| ! | GTAGAATATAAAATGCTATC+TGG | - | chr8_2:68411827-68411846 | Msa1264830:intron | 25.0% |
| ! | AAAATTTGGTATAGAGAGTA+AGG | + | chr8_2:68411889-68411908 | None:intergenic | 25.0% |
| !!! | AAACTTGTTACAAAGTCAAT+AGG | + | chr8_2:68411991-68412010 | None:intergenic | 25.0% |
| ! | ATCATAATCATCTTAATGCA+AGG | + | chr8_2:68412020-68412039 | None:intergenic | 25.0% |
| ! | TGATATCACTTTACTTTCAA+AGG | - | chr8_2:68412085-68412104 | Msa1264830:intron | 25.0% |
| !! | AAGATATTTTCAAAACCACT+AGG | + | chr8_2:68412159-68412178 | None:intergenic | 25.0% |
| ! | TAACTAAGTATAAACAGGTA+CGG | + | chr8_2:68412305-68412324 | None:intergenic | 25.0% |
| ! | CGAAATAACTAAGTATAAAC+AGG | + | chr8_2:68412310-68412329 | None:intergenic | 25.0% |
| !! | GATCAAAAGCAAGATAATTT+TGG | + | chr8_2:68412376-68412395 | None:intergenic | 25.0% |
| !! | CTTTTGATCAAAATAGTAGA+AGG | - | chr8_2:68412387-68412406 | Msa1264830:intron | 25.0% |
| !!! | ATTTTAAAAAATGAAGGTCC+AGG | + | chr8_2:68412507-68412526 | None:intergenic | 25.0% |
| !!! | CGGCAAATTTTAAAAAATGA+AGG | + | chr8_2:68412513-68412532 | None:intergenic | 25.0% |
| !! | TTGTAGTTAGTTGATATTGT+TGG | - | chr8_2:68412795-68412814 | Msa1264830:intron | 25.0% |
| ! | CCAAATAAAACTATGTAGTT+GGG | + | chr8_2:68413815-68413834 | None:intergenic | 25.0% |
| ! | TCCAAATAAAACTATGTAGT+TGG | + | chr8_2:68413816-68413835 | None:intergenic | 25.0% |
| ! | AATCAATAAGCACAATATTC+AGG | + | chr8_2:68413927-68413946 | None:intergenic | 25.0% |
| ! | AAGATACCTATTATAAGTGA+GGG | + | chr8_2:68414185-68414204 | None:intergenic | 25.0% |
| ! | AAAGATACCTATTATAAGTG+AGG | + | chr8_2:68414186-68414205 | None:intergenic | 25.0% |
| ! | AGAGATAATCTCAATCAATT+CGG | + | chr8_2:68414375-68414394 | None:intergenic | 25.0% |
| ! | ATGACGATATTGAGATATAT+CGG | - | chr8_2:68414453-68414472 | Msa1264830:intron | 25.0% |
| !!! | TTGGTTTCTTTTGAAATTGT+TGG | - | chr8_2:68414476-68414495 | Msa1264830:CDS | 25.0% |
| ! | AAAACAATTCCAGAAATATC+TGG | + | chr8_2:68414582-68414601 | None:intergenic | 25.0% |
| CAGAACTGTATTAAAAAGCT+AGG | - | chr8_2:68409086-68409105 | Msa1264830:three_prime_UTR | 30.0% | |
| TACAGAGATCAATCTTCTAT+TGG | - | chr8_2:68409343-68409362 | Msa1264830:CDS | 30.0% | |
| !! | AATGAAAGTACCAATTTGAG+TGG | + | chr8_2:68409386-68409405 | None:intergenic | 30.0% |
| ! | ACCCTTGATTTTTGATGAAT+AGG | - | chr8_2:68409966-68409985 | Msa1264830:intron | 30.0% |
| ! | GGTTCCGTTTATATTCTTTT+AGG | - | chr8_2:68410059-68410078 | Msa1264830:intron | 30.0% |
| AAATACAACTGATGCAATTG+TGG | + | chr8_2:68410263-68410282 | None:intergenic | 30.0% | |
| TTGAAATTGCAGACAATTGT+GGG | + | chr8_2:68410287-68410306 | None:intergenic | 30.0% | |
| !!! | AAAGGTTCTAAATTTTGTCG+GGG | + | chr8_2:68410330-68410349 | None:intergenic | 30.0% |
| !!! | CAAAGGTTCTAAATTTTGTC+GGG | + | chr8_2:68410331-68410350 | None:intergenic | 30.0% |
| !!! | GCAAAGGTTCTAAATTTTGT+CGG | + | chr8_2:68410332-68410351 | None:intergenic | 30.0% |
| AACAGTATTTCACATTGCAA+AGG | + | chr8_2:68410348-68410367 | None:intergenic | 30.0% | |
| ! | TTTGAGATAAAATCCGGTAA+TGG | - | chr8_2:68410431-68410450 | Msa1264830:intron | 30.0% |
| ! | ATAAAATCCGGTAATGGTAA+TGG | - | chr8_2:68410437-68410456 | Msa1264830:intron | 30.0% |
| ACATACTTTGTCTCTTTATC+AGG | + | chr8_2:68410489-68410508 | None:intergenic | 30.0% | |
| AGAGACAAAGTATGTCATAT+TGG | - | chr8_2:68410494-68410513 | Msa1264830:intron | 30.0% | |
| GAGACAAAGTATGTCATATT+GGG | - | chr8_2:68410495-68410514 | Msa1264830:intron | 30.0% | |
| AATATGGACATTGCTCTTAA+CGG | - | chr8_2:68410700-68410719 | Msa1264830:intron | 30.0% | |
| ! | AAAAAGGCTTTAATGTCACT+GGG | + | chr8_2:68410920-68410939 | None:intergenic | 30.0% |
| CTAAACAATGGGTATATACT+CGG | + | chr8_2:68411146-68411165 | None:intergenic | 30.0% | |
| !! | TTAATAGATGAAAGTACCTC+GGG | + | chr8_2:68411307-68411326 | None:intergenic | 30.0% |
| GGGAAAAACTTCATTACAAT+AGG | + | chr8_2:68411346-68411365 | None:intergenic | 30.0% | |
| ! | ATTGTAATGAAGTTTTTCCC+AGG | - | chr8_2:68411346-68411365 | Msa1264830:intron | 30.0% |
| TTGACAATATTTCATGTCAG+GGG | + | chr8_2:68411373-68411392 | None:intergenic | 30.0% | |
| CTTGACAATATTTCATGTCA+GGG | + | chr8_2:68411374-68411393 | None:intergenic | 30.0% | |
| ACTTGACAATATTTCATGTC+AGG | + | chr8_2:68411375-68411394 | None:intergenic | 30.0% | |
| ATTCAAAATATGACAGTGCA+AGG | - | chr8_2:68411746-68411765 | Msa1264830:intron | 30.0% | |
| TAGAGGAAAGTGAGAAAATT+TGG | + | chr8_2:68411903-68411922 | None:intergenic | 30.0% | |
| GATGATTATGATTTCATGGA+TGG | - | chr8_2:68412028-68412047 | Msa1264830:intron | 30.0% | |
| GAGTATATATGAACTCTGAA+TGG | + | chr8_2:68412694-68412713 | None:intergenic | 30.0% | |
| GTTAGATAACTAGTTAGAGA+CGG | - | chr8_2:68412817-68412836 | Msa1264830:intron | 30.0% | |
| TTAGATAACTAGTTAGAGAC+GGG | - | chr8_2:68412818-68412837 | Msa1264830:intron | 30.0% | |
| ATTAGAGGATGCATACAATA+TGG | - | chr8_2:68412843-68412862 | Msa1264830:intron | 30.0% | |
| TTAGAGGATGCATACAATAT+GGG | - | chr8_2:68412844-68412863 | Msa1264830:intron | 30.0% | |
| ACAATATGGGTGAAGTAATA+AGG | - | chr8_2:68412857-68412876 | Msa1264830:intron | 30.0% | |
| CAATATGGGTGAAGTAATAA+GGG | - | chr8_2:68412858-68412877 | Msa1264830:intron | 30.0% | |
| AATATGGGTGAAGTAATAAG+GGG | - | chr8_2:68412859-68412878 | Msa1264830:intron | 30.0% | |
| GAAAATATGAACAACACTTG+AGG | + | chr8_2:68412929-68412948 | None:intergenic | 30.0% | |
| TTCACGAAAATTTCGTGAAA+AGG | + | chr8_2:68413223-68413242 | None:intergenic | 30.0% | |
| ! | TTCACGAAATTTTCGTGAAA+AGG | - | chr8_2:68413224-68413243 | Msa1264830:CDS | 30.0% |
| ! | AAATGGTCAGTTTTTACTTC+AGG | + | chr8_2:68413572-68413591 | None:intergenic | 30.0% |
| ACTGACCATTTAATTATGAG+AGG | - | chr8_2:68413581-68413600 | Msa1264830:CDS | 30.0% | |
| CTGACCATTTAATTATGAGA+GGG | - | chr8_2:68413582-68413601 | Msa1264830:CDS | 30.0% | |
| !!! | CCCAACTACATAGTTTTATT+TGG | - | chr8_2:68413812-68413831 | Msa1264830:intron | 30.0% |
| CTTGTTAACACAAAAGAATC+AGG | + | chr8_2:68413886-68413905 | None:intergenic | 30.0% | |
| CTCAATAAAAAAGCAGCAAA+AGG | + | chr8_2:68413966-68413985 | None:intergenic | 30.0% | |
| TATATAGGTCATGTTCAATG+CGG | - | chr8_2:68414069-68414088 | Msa1264830:CDS | 30.0% | |
| AGATACTGATGCAATTATAC+AGG | + | chr8_2:68414275-68414294 | None:intergenic | 30.0% | |
| GAATTGATTGAGATTATCTC+TGG | - | chr8_2:68414374-68414393 | Msa1264830:intron | 30.0% | |
| !!! | GGAATTGTTTTTTGATGTTG+AGG | - | chr8_2:68414591-68414610 | Msa1264830:five_prime_UTR | 30.0% |
| CAAAGGCCAATAGTTATTAT+TGG | + | chr8_2:68414665-68414684 | None:intergenic | 30.0% | |
| AATAACAGTTCGAGAAACAA+AGG | + | chr8_2:68414682-68414701 | None:intergenic | 30.0% | |
| ACGAAAGAATCTCAAATCGA+TGG | - | chr8_2:68409138-68409157 | Msa1264830:three_prime_UTR | 35.0% | |
| AGAGATCAATCTTCTATTGG+AGG | - | chr8_2:68409346-68409365 | Msa1264830:CDS | 35.0% | |
| CGTACTATTTCCACTCAAAT+TGG | - | chr8_2:68409373-68409392 | Msa1264830:intron | 35.0% | |
| TTGTTTGTGCAGTGAGAAAT+CGG | - | chr8_2:68409510-68409529 | Msa1264830:intron | 35.0% | |
| AATTACCAAGGCTATGAAGA+TGG | - | chr8_2:68409559-68409578 | Msa1264830:CDS | 35.0% | |
| GACTGAAAACAAAGACTGAA+TGG | - | chr8_2:68409768-68409787 | Msa1264830:intron | 35.0% | |
| TTGATTGTAACCACACATGT+CGG | - | chr8_2:68409864-68409883 | Msa1264830:intron | 35.0% | |
| GAATGTGTGTCTAGTATTGT+TGG | + | chr8_2:68409915-68409934 | None:intergenic | 35.0% | |
| ! | ACACATTCAATCAGAAGTGT+GGG | - | chr8_2:68409927-68409946 | Msa1264830:intron | 35.0% |
| CATCAAAAATCAAGGGTGAA+GGG | + | chr8_2:68409963-68409982 | None:intergenic | 35.0% | |
| TCATCAAAAATCAAGGGTGA+AGG | + | chr8_2:68409964-68409983 | None:intergenic | 35.0% | |
| ATGAATAGGAATTGTCCACA+CGG | - | chr8_2:68409980-68409999 | Msa1264830:intron | 35.0% | |
| TTTCATGTCATTGCTCATTG+TGG | - | chr8_2:68410038-68410057 | Msa1264830:intron | 35.0% | |
| ATTACCGTTTCTTCAGACAA+AGG | - | chr8_2:68410107-68410126 | Msa1264830:intron | 35.0% | |
| AAGACCTTTGTCTGAAGAAA+CGG | + | chr8_2:68410114-68410133 | None:intergenic | 35.0% | |
| TTGTTGTCTGTGTATTGTGA+TGG | - | chr8_2:68410209-68410228 | Msa1264830:intron | 35.0% | |
| CTTGAAATTGCAGACAATTG+TGG | + | chr8_2:68410288-68410307 | None:intergenic | 35.0% | |
| CACAATTGTCTGCAATTTCA+AGG | - | chr8_2:68410286-68410305 | Msa1264830:intron | 35.0% | |
| ! | TTTGGAACCATTACCATTAC+CGG | + | chr8_2:68410447-68410466 | None:intergenic | 35.0% |
| CCTATAGTAGCAAATAGGTT+TGG | + | chr8_2:68410465-68410484 | None:intergenic | 35.0% | |
| ! | CCAAACCTATTTGCTACTAT+AGG | - | chr8_2:68410462-68410481 | Msa1264830:intron | 35.0% |
| GAATCCTCTGAATTATACTC+AGG | - | chr8_2:68410590-68410609 | Msa1264830:intron | 35.0% | |
| CTAACCTGAGTATAATTCAG+AGG | + | chr8_2:68410597-68410616 | None:intergenic | 35.0% | |
| AATATGAACGTCACTCTAAC+TGG | - | chr8_2:68410826-68410845 | Msa1264830:intron | 35.0% | |
| TCTGACTGAATATAATGTGG+TGG | - | chr8_2:68410867-68410886 | Msa1264830:intron | 35.0% | |
| ! | CAAAAAGGCTTTAATGTCAC+TGG | + | chr8_2:68410921-68410940 | None:intergenic | 35.0% |
| TTGGGGAAAAATGCTTTCTT+TGG | + | chr8_2:68411025-68411044 | None:intergenic | 35.0% | |
| !!! | GTATTTTCAGGTTTCTGTCT+TGG | - | chr8_2:68411177-68411196 | Msa1264830:intron | 35.0% |
| ! | TGATGACATTCTGAAAAACG+TGG | - | chr8_2:68411201-68411220 | Msa1264830:intron | 35.0% |
| ! | CGTTGGTAGAAATTGTACAA+CGG | + | chr8_2:68411266-68411285 | None:intergenic | 35.0% |
| CGTTGTACAATTTCTACCAA+CGG | - | chr8_2:68411264-68411283 | Msa1264830:intron | 35.0% | |
| !! | TAATAGATGAAAGTACCTCG+GGG | + | chr8_2:68411306-68411325 | None:intergenic | 35.0% |
| TATTGTCAAGTTTCGACGTT+TGG | - | chr8_2:68411384-68411403 | Msa1264830:intron | 35.0% | |
| TTACATCACACCATTGAAAC+AGG | + | chr8_2:68411479-68411498 | None:intergenic | 35.0% | |
| CATGTAGATTGTTGAAAGAG+AGG | - | chr8_2:68411508-68411527 | Msa1264830:intron | 35.0% | |
| TGGATTCGTATGAGATTGAA+GGG | - | chr8_2:68411558-68411577 | Msa1264830:intron | 35.0% | |
| ! | TATAAAATGCTATCTGGGAC+CGG | - | chr8_2:68411833-68411852 | Msa1264830:intron | 35.0% |
| ! | GCTTAATTTGATCCCTGTTA+TGG | + | chr8_2:68411867-68411886 | None:intergenic | 35.0% |
| TTATTTCCAAATAGCCAGGT+AGG | + | chr8_2:68411934-68411953 | None:intergenic | 35.0% | |
| GGAATTATTTCCAAATAGCC+AGG | + | chr8_2:68411938-68411957 | None:intergenic | 35.0% | |
| GTTACAAAGTCAATAGGAAG+CGG | + | chr8_2:68411985-68412004 | None:intergenic | 35.0% | |
| !! | AAACTGCTCTAGAATGTTCT+TGG | + | chr8_2:68412065-68412084 | None:intergenic | 35.0% |
| !!! | CATGATTTGTTGTGACCTTT+TGG | - | chr8_2:68412196-68412215 | Msa1264830:CDS | 35.0% |
| AAGTATAAACAGGTACGGTT+CGG | + | chr8_2:68412300-68412319 | None:intergenic | 35.0% | |
| ! | CTTAGTTATTTCGTCGTAGT+TGG | - | chr8_2:68412317-68412336 | Msa1264830:intron | 35.0% |
| ! | ATGTTTTATACCAACGTACC+TGG | - | chr8_2:68412486-68412505 | Msa1264830:CDS | 35.0% |
| TATGAACTCTGAATGGAATG+CGG | + | chr8_2:68412687-68412706 | None:intergenic | 35.0% | |
| CTCACATATAAGCTGTAAAG+TGG | - | chr8_2:68412711-68412730 | Msa1264830:intron | 35.0% | |
| ATACTACAACATTCGGTAAC+TGG | - | chr8_2:68412748-68412767 | Msa1264830:intron | 35.0% | |
| GTCTTCTAAACCTTTGGTAT+AGG | - | chr8_2:68413292-68413311 | Msa1264830:intron | 35.0% | |
| AGGATTTGAACCTATACCAA+AGG | + | chr8_2:68413305-68413324 | None:intergenic | 35.0% | |
| GGTATAGGTTCAAATCCTAT+TGG | - | chr8_2:68413307-68413326 | Msa1264830:intron | 35.0% | |
| GGAAAAAATTTGCGTCCAAT+AGG | + | chr8_2:68413325-68413344 | None:intergenic | 35.0% | |
| CAAGCCCTCTCATAATTAAA+TGG | + | chr8_2:68413589-68413608 | None:intergenic | 35.0% | |
| GAAGAAAAGAAACACATCAC+TGG | - | chr8_2:68413643-68413662 | Msa1264830:intron | 35.0% | |
| TAAACACCTCTTATACTGCA+GGG | - | chr8_2:68413666-68413685 | Msa1264830:intron | 35.0% | |
| AAAGAATCAGGAACAAGGTT+GGG | + | chr8_2:68413874-68413893 | None:intergenic | 35.0% | |
| AAAAGAATCAGGAACAAGGT+TGG | + | chr8_2:68413875-68413894 | None:intergenic | 35.0% | |
| ACACAAAAGAATCAGGAACA+AGG | + | chr8_2:68413879-68413898 | None:intergenic | 35.0% | |
| TTGAGAACTTTGACGTTTGA+AGG | - | chr8_2:68413998-68414017 | Msa1264830:intron | 35.0% | |
| ACTGATGCAATTATACAGGA+TGG | + | chr8_2:68414271-68414290 | None:intergenic | 35.0% | |
| ! | AGACTAGTCAGTGAAATCAT+AGG | + | chr8_2:68414313-68414332 | None:intergenic | 35.0% |
| GATAATCTCAATCAATTCGG+TGG | + | chr8_2:68414372-68414391 | None:intergenic | 35.0% | |
| CGATATTGAGATATATCGGT+TGG | - | chr8_2:68414457-68414476 | Msa1264830:intron | 35.0% | |
| ! | CTCGAACTGTTATTTACTTG+TGG | - | chr8_2:68414688-68414707 | Msa1264830:five_prime_UTR | 35.0% |
| CTGAAAATTCACGTGGTTTG+TGG | - | chr8_2:68409618-68409637 | Msa1264830:CDS | 40.0% | |
| GTCAATGTGTTTGTGTGTGT+CGG | + | chr8_2:68409813-68409832 | None:intergenic | 40.0% | |
| CACACATTCAATCAGAAGTG+TGG | - | chr8_2:68409926-68409945 | Msa1264830:intron | 40.0% | |
| ACAAATTAGTATGCACCGTG+TGG | + | chr8_2:68409998-68410017 | None:intergenic | 40.0% | |
| TCTTCAGACAAAGGTCTTTG+TGG | - | chr8_2:68410116-68410135 | Msa1264830:intron | 40.0% | |
| ! | ACCAGAATTCAACTTGCTCA+AGG | + | chr8_2:68410177-68410196 | None:intergenic | 40.0% |
| AACTGATGCAATTGTGGATG+TGG | + | chr8_2:68410257-68410276 | None:intergenic | 40.0% | |
| CAGGTCCTATAGTAGCAAAT+AGG | + | chr8_2:68410470-68410489 | None:intergenic | 40.0% | |
| GTATGTCATATTGGGAGAGA+AGG | - | chr8_2:68410503-68410522 | Msa1264830:intron | 40.0% | |
| ! | AAACCTGTTCAGCTTTTGTG+AGG | - | chr8_2:68410962-68410981 | Msa1264830:intron | 40.0% |
| TTTCCTCACAAAAGCTGAAC+AGG | + | chr8_2:68410968-68410987 | None:intergenic | 40.0% | |
| ! | TGCTTTCTTTGGCAGCTTTT+GGG | + | chr8_2:68411014-68411033 | None:intergenic | 40.0% |
| ! | ATGCTTTCTTTGGCAGCTTT+TGG | + | chr8_2:68411015-68411034 | None:intergenic | 40.0% |
| GATAGTATAGTTGACACCGT+TGG | + | chr8_2:68411283-68411302 | None:intergenic | 40.0% | |
| !! | AATAGATGAAAGTACCTCGG+GGG | + | chr8_2:68411305-68411324 | None:intergenic | 40.0% |
| !! | GTGCTTTTTGCCTGTTTCAA+TGG | - | chr8_2:68411466-68411485 | Msa1264830:intron | 40.0% |
| CTGGATTCGTATGAGATTGA+AGG | - | chr8_2:68411557-68411576 | Msa1264830:intron | 40.0% | |
| GGATTCGTATGAGATTGAAG+GGG | - | chr8_2:68411559-68411578 | Msa1264830:intron | 40.0% | |
| GATTCGTATGAGATTGAAGG+GGG | - | chr8_2:68411560-68411579 | Msa1264830:intron | 40.0% | |
| TACGCAAGAAAACTGGAACT+CGG | + | chr8_2:68411618-68411637 | None:intergenic | 40.0% | |
| TTGTACGTACGCAAGAAAAC+TGG | + | chr8_2:68411625-68411644 | None:intergenic | 40.0% | |
| AGTACACAACGAAGTTTGTC+AGG | + | chr8_2:68411660-68411679 | None:intergenic | 40.0% | |
| TTAGTCTAATTGCCGTACGT+AGG | - | chr8_2:68411710-68411729 | Msa1264830:intron | 40.0% | |
| !! | TGATTCTGAAGTCCTACGTA+CGG | + | chr8_2:68411725-68411744 | None:intergenic | 40.0% |
| ! | ATAAAATGCTATCTGGGACC+GGG | - | chr8_2:68411834-68411853 | Msa1264830:intron | 40.0% |
| ! | ACTTTCTCTCAGAGCATTCA+AGG | - | chr8_2:68412125-68412144 | Msa1264830:CDS | 40.0% |
| TTCAAGGACATGTTACCTAG+TGG | - | chr8_2:68412141-68412160 | Msa1264830:CDS | 40.0% | |
| !! | GTTGTGACCTTTTGGTTACT+AGG | - | chr8_2:68412204-68412223 | Msa1264830:CDS | 40.0% |
| AGAGCTTCCTAGTAACCAAA+AGG | + | chr8_2:68412214-68412233 | None:intergenic | 40.0% | |
| TTGGTGCAGCAAAAACGTAA+GGG | - | chr8_2:68412336-68412355 | Msa1264830:intron | 40.0% | |
| AAATTTGCCGTATTACGCAC+CGG | - | chr8_2:68412523-68412542 | Msa1264830:CDS | 40.0% | |
| TAGCTATGATGCATAGGTAC+GGG | + | chr8_2:68412575-68412594 | None:intergenic | 40.0% | |
| CTAGCTATGATGCATAGGTA+CGG | + | chr8_2:68412576-68412595 | None:intergenic | 40.0% | |
| TATGCATCATAGCTAGGAAG+CGG | - | chr8_2:68412580-68412599 | Msa1264830:intron | 40.0% | |
| CTTCTCTTGATGCTTTCTCT+CGG | + | chr8_2:68412625-68412644 | None:intergenic | 40.0% | |
| !! | GAGAGAAAGCATCAAGAGAA+GGG | - | chr8_2:68412624-68412643 | Msa1264830:intron | 40.0% |
| AGTTAGAGACGGGAAATTAG+AGG | - | chr8_2:68412828-68412847 | Msa1264830:intron | 40.0% | |
| !!! | AGGGGTTTTGTTCTGTAGTT+TGG | - | chr8_2:68412877-68412896 | Msa1264830:intron | 40.0% |
| !!! | GGGGTTTTGTTCTGTAGTTT+GGG | - | chr8_2:68412878-68412897 | Msa1264830:intron | 40.0% |
| !! | GAAAAGCGTCCATTGTCTAA+TGG | - | chr8_2:68413258-68413277 | Msa1264830:intron | 40.0% |
| CTGTCCTATCCATTAGACAA+TGG | + | chr8_2:68413270-68413289 | None:intergenic | 40.0% | |
| ! | TTGTCTAATGGATAGGACAG+AGG | - | chr8_2:68413270-68413289 | Msa1264830:intron | 40.0% |
| ACAGAGGTCTTCTAAACCTT+TGG | - | chr8_2:68413286-68413305 | Msa1264830:intron | 40.0% | |
| GTAAACACCTCTTATACTGC+AGG | - | chr8_2:68413665-68413684 | Msa1264830:intron | 40.0% | |
| ! | CTATGTAGTTGGGAGTGTAA+TGG | + | chr8_2:68413805-68413824 | None:intergenic | 40.0% |
| GGACATACCATGACATCAAA+AGG | - | chr8_2:68413833-68413852 | Msa1264830:intron | 40.0% | |
| ! | AAATGGGCCTTTTGATGTCA+TGG | + | chr8_2:68413843-68413862 | None:intergenic | 40.0% |
| AGGTTGGGCGTAGATAAAAT+GGG | + | chr8_2:68413859-68413878 | None:intergenic | 40.0% | |
| AAGGTTGGGCGTAGATAAAA+TGG | + | chr8_2:68413860-68413879 | None:intergenic | 40.0% | |
| GTCTGACCCTCACTTATAAT+AGG | - | chr8_2:68414176-68414195 | Msa1264830:CDS | 40.0% | |
| CTTGGTTGACCAGATATTTC+TGG | - | chr8_2:68414570-68414589 | Msa1264830:exon | 40.0% | |
| GAATCTCAAATCGATGGCGA+TGG | - | chr8_2:68409144-68409163 | Msa1264830:three_prime_UTR | 45.0% | |
| GAGTGAGAGAGAACGAACAA+GGG | + | chr8_2:68409262-68409281 | None:intergenic | 45.0% | |
| AGAGTGAGAGAGAACGAACA+AGG | + | chr8_2:68409263-68409282 | None:intergenic | 45.0% | |
| AGCAACCATCTTCATAGCCT+TGG | + | chr8_2:68409567-68409586 | None:intergenic | 45.0% | |
| ! | AACTACGTGCTGTTCAAACC+AGG | - | chr8_2:68409594-68409613 | Msa1264830:CDS | 45.0% |
| ! | ACTACGTGCTGTTCAAACCA+GGG | - | chr8_2:68409595-68409614 | Msa1264830:CDS | 45.0% |
| GTGTTTGATACCGACATGTG+TGG | + | chr8_2:68409877-68409896 | None:intergenic | 45.0% | |
| GTATCAAACACTGACGAGTG+AGG | - | chr8_2:68409886-68409905 | Msa1264830:intron | 45.0% | |
| TCAGACAAAGGTCTTTGTGG+TGG | - | chr8_2:68410119-68410138 | Msa1264830:intron | 45.0% | |
| CACGTCTGTCAAGATAAGCA+GGG | - | chr8_2:68410151-68410170 | Msa1264830:intron | 45.0% | |
| ! | GCCTTGAGCAAGTTGAATTC+TGG | - | chr8_2:68410173-68410192 | Msa1264830:intron | 45.0% |
| CATATTGGGAGAGAAGGCTA+AGG | - | chr8_2:68410509-68410528 | Msa1264830:intron | 45.0% | |
| ATGTGGTGGTTGCTTAATGC+TGG | - | chr8_2:68410881-68410900 | Msa1264830:intron | 45.0% | |
| TGGTTGCTTAATGCTGGCAA+GGG | - | chr8_2:68410887-68410906 | Msa1264830:intron | 45.0% | |
| ! | GGCTTTAATGTCACTGGGTT+GGG | + | chr8_2:68410915-68410934 | None:intergenic | 45.0% |
| ! | AGGCTTTAATGTCACTGGGT+TGG | + | chr8_2:68410916-68410935 | None:intergenic | 45.0% |
| TATTTCATGTCAGGGGACCT+GGG | + | chr8_2:68411366-68411385 | None:intergenic | 45.0% | |
| ATATTTCATGTCAGGGGACC+TGG | + | chr8_2:68411367-68411386 | None:intergenic | 45.0% | |
| ! | TAAAATGCTATCTGGGACCG+GGG | - | chr8_2:68411835-68411854 | Msa1264830:intron | 45.0% |
| GTTGTGTGGAGGGATAGATA+TGG | + | chr8_2:68411959-68411978 | None:intergenic | 45.0% | |
| ATAGGAAGCGGAAAGTTGTG+TGG | + | chr8_2:68411973-68411992 | None:intergenic | 45.0% | |
| AAGCATGCGTACTCCAAACA+TGG | - | chr8_2:68412235-68412254 | Msa1264830:intron | 45.0% | |
| ! | CTCCAAACATGGAGAAGTAC+CGG | - | chr8_2:68412246-68412265 | Msa1264830:intron | 45.0% |
| !! | TCCAAACATGGAGAAGTACC+GGG | - | chr8_2:68412247-68412266 | Msa1264830:intron | 45.0% |
| GTTGGTGCAGCAAAAACGTA+AGG | - | chr8_2:68412335-68412354 | Msa1264830:intron | 45.0% | |
| AAATGAAGGTCCAGGTACGT+TGG | + | chr8_2:68412499-68412518 | None:intergenic | 45.0% | |
| ATGATGCATAGGTACGGGTA+CGG | + | chr8_2:68412570-68412589 | None:intergenic | 45.0% | |
| CGTACCTATGCATCATAGCT+AGG | - | chr8_2:68412574-68412593 | Msa1264830:intron | 45.0% | |
| GCTTCCTAGCTATGATGCAT+AGG | + | chr8_2:68412581-68412600 | None:intergenic | 45.0% | |
| !! | CGAGAGAAAGCATCAAGAGA+AGG | - | chr8_2:68412623-68412642 | Msa1264830:intron | 45.0% |
| ! | TTGAGGCATTTGAGAGACCT+GGG | + | chr8_2:68412912-68412931 | None:intergenic | 45.0% |
| ! | GCGTCCATTGTCTAATGGAT+AGG | - | chr8_2:68413263-68413282 | Msa1264830:intron | 45.0% |
| TCACAACCCTGCAGTATAAG+AGG | + | chr8_2:68413675-68413694 | None:intergenic | 45.0% | |
| CTTGACAGGTCACTACTTTG+TGG | + | chr8_2:68413715-68413734 | None:intergenic | 45.0% | |
| ! | AGAGGTGTACTTGGACTCTT+GGG | + | chr8_2:68413775-68413794 | None:intergenic | 45.0% |
| ! | TGTAGTTGGGAGTGTAATGG+AGG | + | chr8_2:68413802-68413821 | None:intergenic | 45.0% |
| ! | TTTCAAGGCGAAACTAGCCT+TGG | - | chr8_2:68414541-68414560 | Msa1264830:CDS | 45.0% |
| !! | TTCAAGGCGAAACTAGCCTT+GGG | - | chr8_2:68414542-68414561 | Msa1264830:CDS | 45.0% |
| !! | AACTAGCCTTGGGGATTTCT+TGG | - | chr8_2:68414552-68414571 | Msa1264830:CDS | 45.0% |
| !! | GAATAAAAAAATAAAAAATT+AGG | + | chr8_2:68409422-68409441 | None:intergenic | 5.0% |
| !!! | TTGTTTATATAAATTTTATA+AGG | - | chr8_2:68413039-68413058 | Msa1264830:intron | 5.0% |
| TCGCTGAGAGAGAGAAAGAG+AGG | + | chr8_2:68409115-68409134 | None:intergenic | 50.0% | |
| GGTGGTTGAGAAGACATGAG+AGG | + | chr8_2:68409205-68409224 | None:intergenic | 50.0% | |
| !! | GATCGGAGAGTGGTGTTGAT+TGG | + | chr8_2:68409226-68409245 | None:intergenic | 50.0% |
| AGGGAGAGATGAGAGGAGAT+CGG | + | chr8_2:68409243-68409262 | None:intergenic | 50.0% | |
| ACGAACAAGGGAGAGATGAG+AGG | + | chr8_2:68409250-68409269 | None:intergenic | 50.0% | |
| ACCAGGGCTGAAAATTCACG+TGG | - | chr8_2:68409611-68409630 | Msa1264830:CDS | 50.0% | |
| ! | ACCACGTGAATTTTCAGCCC+TGG | + | chr8_2:68409615-68409634 | None:intergenic | 50.0% |
| CAGCCATTTACCGCTCTTCT+CGG | - | chr8_2:68409641-68409660 | Msa1264830:CDS | 50.0% | |
| ! | GTCGGTGCTTCATTGGTGAA+GGG | + | chr8_2:68409795-68409814 | None:intergenic | 50.0% |
| ! | TGTCGGTGCTTCATTGGTGA+AGG | + | chr8_2:68409796-68409815 | None:intergenic | 50.0% |
| ! | TGTGTGTGTCGGTGCTTCAT+TGG | + | chr8_2:68409802-68409821 | None:intergenic | 50.0% |
| CCTGCTTATCTTGACAGACG+TGG | + | chr8_2:68410153-68410172 | None:intergenic | 50.0% | |
| CCACGTCTGTCAAGATAAGC+AGG | - | chr8_2:68410150-68410169 | Msa1264830:intron | 50.0% | |
| GTGGTTGCTTAATGCTGGCA+AGG | - | chr8_2:68410886-68410905 | Msa1264830:intron | 50.0% | |
| ACGTGGAGTATGATGCACTG+AGG | - | chr8_2:68411218-68411237 | Msa1264830:intron | 50.0% | |
| GTCAACTATACTATCCCCCG+AGG | - | chr8_2:68411288-68411307 | Msa1264830:intron | 50.0% | |
| GTTGAAAGAGAGGCTGAAGC+TGG | - | chr8_2:68411518-68411537 | Msa1264830:intron | 50.0% | |
| ACCGGGGTGAAATCCATAAC+AGG | - | chr8_2:68411851-68411870 | Msa1264830:intron | 50.0% | |
| CCCTGTTATGGATTTCACCC+CGG | + | chr8_2:68411855-68411874 | None:intergenic | 50.0% | |
| CCGGGGTGAAATCCATAACA+GGG | - | chr8_2:68411852-68411871 | Msa1264830:intron | 50.0% | |
| CAAATAGCCAGGTAGGAGCT+AGG | + | chr8_2:68411927-68411946 | None:intergenic | 50.0% | |
| CTAGCTCCTACCTGGCTATT+TGG | - | chr8_2:68411925-68411944 | Msa1264830:intron | 50.0% | |
| GAAGCGGAAAGTTGTGTGGA+GGG | + | chr8_2:68411969-68411988 | None:intergenic | 50.0% | |
| ACCCGGTACTTCTCCATGTT+TGG | + | chr8_2:68412251-68412270 | None:intergenic | 50.0% | |
| !! | ATGGGTACCGGTGCGTAATA+CGG | + | chr8_2:68412533-68412552 | None:intergenic | 50.0% |
| CTAGGAAGCGGTCAAAGCAT+AGG | - | chr8_2:68412592-68412611 | Msa1264830:intron | 50.0% | |
| GAAGCGGTCAAAGCATAGGA+AGG | - | chr8_2:68412596-68412615 | Msa1264830:intron | 50.0% | |
| CATTTGAGAGACCTGGGATC+TGG | + | chr8_2:68412906-68412925 | None:intergenic | 50.0% | |
| ! | CTTGAGGCATTTGAGAGACC+TGG | + | chr8_2:68412913-68412932 | None:intergenic | 50.0% |
| TGTACTTGGACTCTTGGGGA+AGG | + | chr8_2:68413770-68413789 | None:intergenic | 50.0% | |
| GAGGTGTACTTGGACTCTTG+GGG | + | chr8_2:68413774-68413793 | None:intergenic | 50.0% | |
| ! | CAGAGGTGTACTTGGACTCT+TGG | + | chr8_2:68413776-68413795 | None:intergenic | 50.0% |
| ! | AGTTGGGAGTGTAATGGAGG+AGG | + | chr8_2:68413799-68413818 | None:intergenic | 50.0% |
| GGTCATGTTCAATGCGGTGT+TGG | - | chr8_2:68414075-68414094 | Msa1264830:CDS | 50.0% | |
| ATTCCTGCTAGAGCTGTCCA+TGG | + | chr8_2:68414137-68414156 | None:intergenic | 50.0% | |
| ! | ACAGCTCTAGCAGGAATGCT+GGG | - | chr8_2:68414140-68414159 | Msa1264830:CDS | 50.0% |
| !! | TCAAGGCGAAACTAGCCTTG+GGG | - | chr8_2:68414543-68414562 | Msa1264830:CDS | 50.0% |
| GGTCAACCAAGAAATCCCCA+AGG | + | chr8_2:68414561-68414580 | None:intergenic | 50.0% | |
| !! | CGGAGAGTGGTGTTGATTGG+TGG | + | chr8_2:68409223-68409242 | None:intergenic | 55.0% |
| GATGAGAGGAGATCGGAGAG+TGG | + | chr8_2:68409236-68409255 | None:intergenic | 55.0% | |
| TCGCCGAGAAGAGCGGTAAA+TGG | + | chr8_2:68409647-68409666 | None:intergenic | 55.0% | |
| TGTAGCATCGCCGAGAAGAG+CGG | + | chr8_2:68409654-68409673 | None:intergenic | 55.0% | |
| GAAAGAGAGGCTGAAGCTGG+AGG | - | chr8_2:68411521-68411540 | Msa1264830:intron | 55.0% | |
| GCTGAAGCTGGAGGAAGTCT+CGG | - | chr8_2:68411530-68411549 | Msa1264830:intron | 55.0% | |
| TGGAGGAAGTCTCGGTGAAC+TGG | - | chr8_2:68411538-68411557 | Msa1264830:intron | 55.0% | |
| CCAGGTAGGAGCTAGGTTAG+AGG | + | chr8_2:68411920-68411939 | None:intergenic | 55.0% | |
| CCTCTAACCTAGCTCCTACC+TGG | - | chr8_2:68411917-68411936 | Msa1264830:intron | 55.0% | |
| GGAAGCGGAAAGTTGTGTGG+AGG | + | chr8_2:68411970-68411989 | None:intergenic | 55.0% | |
| !! | AGAAGTACCGGGTACGCGTA+TGG | - | chr8_2:68412258-68412277 | Msa1264830:intron | 55.0% |
| ACGAGTACCATACGCGTACC+CGG | + | chr8_2:68412268-68412287 | None:intergenic | 55.0% | |
| ATAGGTACGGGTACGGTACC+CGG | + | chr8_2:68412563-68412582 | None:intergenic | 55.0% | |
| TAGTTTGGGAGCCAGATCCC+AGG | - | chr8_2:68412892-68412911 | Msa1264830:intron | 55.0% | |
| TTGGACTCTTGGGGAAGGAC+GGG | + | chr8_2:68413765-68413784 | None:intergenic | 55.0% | |
| CTTGGACTCTTGGGGAAGGA+CGG | + | chr8_2:68413766-68413785 | None:intergenic | 55.0% | |
| ! | GAGTGTAATGGAGGAGGCAG+AGG | + | chr8_2:68413793-68413812 | None:intergenic | 55.0% |
| GAGAATGCCTGCAGTGAGCA+AGG | - | chr8_2:68414097-68414116 | Msa1264830:CDS | 55.0% | |
| AGGAGCAAGGATGTCTGCCA+TGG | - | chr8_2:68414117-68414136 | Msa1264830:CDS | 55.0% | |
| ! | GACAGCTCTAGCAGGAATGC+TGG | - | chr8_2:68414139-68414158 | Msa1264830:CDS | 55.0% |
| ! | CAGCTCTAGCAGGAATGCTG+GGG | - | chr8_2:68414141-68414160 | Msa1264830:CDS | 55.0% |
| !! | TCTGGAGCATCAGCACTGAC+AGG | - | chr8_2:68414392-68414411 | Msa1264830:intron | 55.0% |
| CCAAACGCTTCCCTTCGCGT+CGG | + | chr8_2:68409180-68409199 | None:intergenic | 60.0% | |
| ACCGGTACCCATACCCGTAC+CGG | - | chr8_2:68412541-68412560 | Msa1264830:intron | 60.0% | |
| ACGGTACCCGGTACGGGTAT+GGG | + | chr8_2:68412551-68412570 | None:intergenic | 60.0% | |
| TACGGTACCCGGTACGGGTA+TGG | + | chr8_2:68412552-68412571 | None:intergenic | 60.0% | |
| TACGGGTACGGTACCCGGTA+CGG | + | chr8_2:68412558-68412577 | None:intergenic | 60.0% | |
| !! | GAAGGACGGGGCTTTTGGGA+AGG | + | chr8_2:68413752-68413771 | None:intergenic | 60.0% |
| ! | TGGGGAAGGACGGGGCTTTT+GGG | + | chr8_2:68413756-68413775 | None:intergenic | 60.0% |
| ! | TTGGGGAAGGACGGGGCTTT+TGG | + | chr8_2:68413757-68413776 | None:intergenic | 60.0% |
| TGGACTCTTGGGGAAGGACG+GGG | + | chr8_2:68413764-68413783 | None:intergenic | 60.0% | |
| ! | GGAGGAGGCAGAGGTGTACT+TGG | + | chr8_2:68413784-68413803 | None:intergenic | 60.0% |
| CCTTGCTCCTTGCTCACTGC+AGG | + | chr8_2:68414107-68414126 | None:intergenic | 60.0% | |
| CCTGCAGTGAGCAAGGAGCA+AGG | - | chr8_2:68414104-68414123 | Msa1264830:CDS | 60.0% | |
| ! | CTGCCATGGACAGCTCTAGC+AGG | - | chr8_2:68414131-68414150 | Msa1264830:CDS | 60.0% |
| CTGCTGCACTCCGACGCGAA+GGG | - | chr8_2:68409167-68409186 | Msa1264830:three_prime_UTR | 65.0% | |
| !! | CCGACGCGAAGGGAAGCGTT+TGG | - | chr8_2:68409177-68409196 | Msa1264830:three_prime_UTR | 65.0% |
| CCCGGTACGGGTATGGGTAC+CGG | + | chr8_2:68412545-68412564 | None:intergenic | 65.0% | |
| CCGGTACCCATACCCGTACC+GGG | - | chr8_2:68412542-68412561 | Msa1264830:intron | 65.0% | |
| ACGGGTACGGTACCCGGTAC+GGG | + | chr8_2:68412557-68412576 | None:intergenic | 65.0% | |
| GCTGCTGCACTCCGACGCGA+AGG | - | chr8_2:68409166-68409185 | Msa1264830:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 68408993 | 68414745 | 68408993 | ID=Msa1264830;Name=Msa1264830 |
| chr8_2 | mRNA | 68408993 | 68414745 | 68408993 | ID=Msa1264830-mRNA-1;Parent=Msa1264830;Name=Msa1264830-mRNA-1;_AED=0.07;_eAED=0.07;_QI=164|1|1|1|1|1|9|327|327 |
| chr8_2 | exon | 68408993 | 68409389 | 68408993 | ID=Msa1264830-mRNA-1:exon:22693;Parent=Msa1264830-mRNA-1 |
| chr8_2 | exon | 68409541 | 68409662 | 68409541 | ID=Msa1264830-mRNA-1:exon:22692;Parent=Msa1264830-mRNA-1 |
| chr8_2 | exon | 68412104 | 68412223 | 68412104 | ID=Msa1264830-mRNA-1:exon:22691;Parent=Msa1264830-mRNA-1 |
| chr8_2 | exon | 68412429 | 68412551 | 68412429 | ID=Msa1264830-mRNA-1:exon:22690;Parent=Msa1264830-mRNA-1 |
| chr8_2 | exon | 68413127 | 68413254 | 68413127 | ID=Msa1264830-mRNA-1:exon:22689;Parent=Msa1264830-mRNA-1 |
| chr8_2 | exon | 68413544 | 68413657 | 68413544 | ID=Msa1264830-mRNA-1:exon:22688;Parent=Msa1264830-mRNA-1 |
| chr8_2 | exon | 68414064 | 68414216 | 68414064 | ID=Msa1264830-mRNA-1:exon:22687;Parent=Msa1264830-mRNA-1 |
| chr8_2 | exon | 68414344 | 68414390 | 68414344 | ID=Msa1264830-mRNA-1:exon:22686;Parent=Msa1264830-mRNA-1 |
| chr8_2 | exon | 68414475 | 68414745 | 68414475 | ID=Msa1264830-mRNA-1:exon:22685;Parent=Msa1264830-mRNA-1 |
| chr8_2 | five_prime_UTR | 68414582 | 68414745 | 68414582 | ID=Msa1264830-mRNA-1:five_prime_utr;Parent=Msa1264830-mRNA-1 |
| chr8_2 | CDS | 68414475 | 68414581 | 68414475 | ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1 |
| chr8_2 | CDS | 68414344 | 68414390 | 68414344 | ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1 |
| chr8_2 | CDS | 68414064 | 68414216 | 68414064 | ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1 |
| chr8_2 | CDS | 68413544 | 68413657 | 68413544 | ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1 |
| chr8_2 | CDS | 68413127 | 68413254 | 68413127 | ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1 |
| chr8_2 | CDS | 68412429 | 68412551 | 68412429 | ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1 |
| chr8_2 | CDS | 68412104 | 68412223 | 68412104 | ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1 |
| chr8_2 | CDS | 68409541 | 68409662 | 68409541 | ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1 |
| chr8_2 | CDS | 68409320 | 68409389 | 68409320 | ID=Msa1264830-mRNA-1:cds;Parent=Msa1264830-mRNA-1 |
| chr8_2 | three_prime_UTR | 68408993 | 68409319 | 68408993 | ID=Msa1264830-mRNA-1:three_prime_utr;Parent=Msa1264830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
