Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0768370 | Msa1264930 | 0.808908 | 2.457965e-50 | -8.615850e-47 |
| Msa0807370 | Msa1264930 | 0.809677 | 1.681625e-50 | -8.615850e-47 |
| Msa0322360 | Msa1264930 | 0.836142 | 1.112539e-56 | -8.615850e-47 |
| Msa1205020 | Msa1264930 | 0.802097 | 6.592901e-49 | -8.615850e-47 |
| Msa0899430 | Msa1264930 | 0.802366 | 5.804476e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 22 sgRNAs with CRISPR-Local
Find 383 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGGGAGAGGGAGAGGGAG+AGG | 0.340398 | 8_2:-68570946 | None:intergenic |
| GCGTGCGTTCTTGATGATAT+TGG | 0.353978 | 8_2:-68571112 | None:intergenic |
| TGATTATTCTACTATCTCAT+TGG | 0.402067 | 8_2:+68573508 | Msa1264930:CDS |
| AAAAGAAAGTGTCACATGTT+TGG | 0.412909 | 8_2:-68570923 | None:intergenic |
| AGTGAGAGAGGGAGAGGGAG+AGG | 0.422848 | 8_2:-68570952 | None:intergenic |
| CTTGATCAGCTAAACTTCCT+TGG | 0.433635 | 8_2:-68573478 | None:intergenic |
| AAAGTGTCACATGTTTGGTC+TGG | 0.457612 | 8_2:-68570918 | None:intergenic |
| CGATCGATGTGTTACATGTT+GGG | 0.463229 | 8_2:+68571026 | Msa1264930:exon |
| CATCAAGAACGCACGCTACA+AGG | 0.477870 | 8_2:+68571119 | Msa1264930:CDS |
| CTCATTGGATGCATCTCTAA+AGG | 0.492161 | 8_2:+68573523 | Msa1264930:CDS |
| CGTTGTAGTGAGAGAGGGAG+AGG | 0.506100 | 8_2:-68570958 | None:intergenic |
| GTGAGAGAGGGAGAGGGAGA+GGG | 0.512976 | 8_2:-68570951 | None:intergenic |
| GCGATCGATGTGTTACATGT+TGG | 0.534141 | 8_2:+68571025 | Msa1264930:exon |
| GATGCTCGTTGTAGTGAGAG+AGG | 0.579359 | 8_2:-68570964 | None:intergenic |
| TCAATGAAAGGAAAGAGTAG+AGG | 0.582023 | 8_2:-68571086 | None:intergenic |
| ACATGTAACACATCGATCGC+AGG | 0.598904 | 8_2:-68571022 | None:intergenic |
| TGATATTGGAAATCAATGAA+AGG | 0.601674 | 8_2:-68571098 | None:intergenic |
| ATCGCAGGAAGGAGTTGCAA+TGG | 0.606905 | 8_2:-68571007 | None:intergenic |
| GTTGTAGTGAGAGAGGGAGA+GGG | 0.614607 | 8_2:-68570957 | None:intergenic |
| ATAGATAGTATTCTTCTCCA+AGG | 0.618229 | 8_2:+68573461 | Msa1264930:intron |
| ATGCTCGTTGTAGTGAGAGA+GGG | 0.626331 | 8_2:-68570963 | None:intergenic |
| GTAACACATCGATCGCAGGA+AGG | 0.703562 | 8_2:-68571018 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTAATTTTGTTTGT+AGG | + | chr8_2:68571160-68571179 | Msa1264930:intron | 10.0% |
| !!! | TTTTTTTAATTTTGTTTGTA+GGG | + | chr8_2:68571161-68571180 | Msa1264930:intron | 10.0% |
| !! | ACAAAAATATATAAATGATA+AGG | - | chr8_2:68574346-68574365 | None:intergenic | 10.0% |
| !! | CCTAATAAAATTAATAAATA+AGG | - | chr8_2:68576700-68576719 | None:intergenic | 10.0% |
| !!! | CCTTATTTATTAATTTTATT+AGG | + | chr8_2:68576697-68576716 | Msa1264930:intron | 10.0% |
| !! | ACAATGATTAATAAAAATAA+CGG | + | chr8_2:68578432-68578451 | Msa1264930:intron | 10.0% |
| !!! | AATTTAATAATTTTGCTTTT+TGG | + | chr8_2:68578583-68578602 | Msa1264930:intron | 10.0% |
| !!! | TTATGATTTATTGATAGTTT+AGG | + | chr8_2:68571199-68571218 | Msa1264930:intron | 15.0% |
| !! | TAATTGTCATCATAATTAAA+TGG | + | chr8_2:68571322-68571341 | Msa1264930:intron | 15.0% |
| !! | AATTGTCATCATAATTAAAT+GGG | + | chr8_2:68571323-68571342 | Msa1264930:intron | 15.0% |
| !! | ATTTACTGTTAGATTATATT+TGG | + | chr8_2:68572112-68572131 | Msa1264930:intron | 15.0% |
| !! | ATAGAAACTACTATAATAAA+AGG | - | chr8_2:68572181-68572200 | None:intergenic | 15.0% |
| !!! | TATTTTTTTGAATCGTAAAA+CGG | - | chr8_2:68572222-68572241 | None:intergenic | 15.0% |
| !!! | TATGTTTCTATTGAATATTT+AGG | + | chr8_2:68572775-68572794 | Msa1264930:intron | 15.0% |
| !!! | ATGTTTCTATTGAATATTTA+GGG | + | chr8_2:68572776-68572795 | Msa1264930:intron | 15.0% |
| !! | ATGTACATATGTATTATTAT+TGG | + | chr8_2:68572953-68572972 | Msa1264930:intron | 15.0% |
| !! | TATATATTCAAGATTGTAAA+TGG | + | chr8_2:68573292-68573311 | Msa1264930:intron | 15.0% |
| !! | ATATATTCAAGATTGTAAAT+GGG | + | chr8_2:68573293-68573312 | Msa1264930:intron | 15.0% |
| !!! | ATATTTGTTTCTTTTTCTTT+AGG | + | chr8_2:68573644-68573663 | Msa1264930:intron | 15.0% |
| !!! | ATACTTTGATTATCTATTTT+TGG | + | chr8_2:68573775-68573794 | Msa1264930:intron | 15.0% |
| !!! | TGATTATATCAGATTTTTTT+AGG | + | chr8_2:68573899-68573918 | Msa1264930:intron | 15.0% |
| !!! | TATATCTTTTTGTTCAATTT+TGG | + | chr8_2:68574409-68574428 | Msa1264930:intron | 15.0% |
| !!! | TTTGTTTGTTTTTTATATGT+TGG | + | chr8_2:68574793-68574812 | Msa1264930:intron | 15.0% |
| !!! | AATACATTTGTTGTAATAAT+TGG | - | chr8_2:68575143-68575162 | None:intergenic | 15.0% |
| !! | AATTATTACAACAAATGTAT+TGG | + | chr8_2:68575142-68575161 | Msa1264930:intron | 15.0% |
| !!! | AGTTTTTTTTTATTACTTCT+TGG | + | chr8_2:68575382-68575401 | Msa1264930:intron | 15.0% |
| !! | AATAGATACTTGAAATATAA+AGG | - | chr8_2:68575523-68575542 | None:intergenic | 15.0% |
| !! | AAAACAAAAAACTTATTGAT+AGG | + | chr8_2:68575595-68575614 | Msa1264930:intron | 15.0% |
| !! | CACTTTCTATTAAAAATTAT+AGG | - | chr8_2:68575701-68575720 | None:intergenic | 15.0% |
| !! | TTAAAAGAAGAAAAAAGTTA+GGG | - | chr8_2:68575840-68575859 | None:intergenic | 15.0% |
| !! | ATTAAAAGAAGAAAAAAGTT+AGG | - | chr8_2:68575841-68575860 | None:intergenic | 15.0% |
| !! | ATTTCTATTGTTATAGTTTA+TGG | + | chr8_2:68576553-68576572 | Msa1264930:intron | 15.0% |
| !! | TGTAAAAAAAAAAAAGTCTA+CGG | - | chr8_2:68576910-68576929 | None:intergenic | 15.0% |
| !!! | TAGTTTGTATATTGAAATTA+AGG | + | chr8_2:68577219-68577238 | Msa1264930:intron | 15.0% |
| !! | TGTCTATATAAATATTTGTT+AGG | + | chr8_2:68577560-68577579 | Msa1264930:intron | 15.0% |
| !!! | ACTCTTTTTAAAAAATAAGT+CGG | - | chr8_2:68577733-68577752 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr8_2:68577946-68577965 | None:intergenic | 15.0% |
| !! | TTAAAACAATTGTTACAAGA+CGG | + | chr8_2:68571432-68571451 | Msa1264930:intron | 20.0% |
| !! | CAATATGTATTACTATCAAT+TGG | + | chr8_2:68571720-68571739 | Msa1264930:intron | 20.0% |
| !! | CGTGATATAATTAGTATATA+TGG | + | chr8_2:68571825-68571844 | Msa1264930:intron | 20.0% |
| !! | CTAAAATAAGTTTGAAAACA+CGG | - | chr8_2:68571868-68571887 | None:intergenic | 20.0% |
| !! | AATAATACATATGTACATCA+AGG | - | chr8_2:68572951-68572970 | None:intergenic | 20.0% |
| !!! | CATATGTATTATTATTGGTT+TGG | + | chr8_2:68572958-68572977 | Msa1264930:intron | 20.0% |
| !! | AAATTAAGTTAAAGCGAAAA+TGG | + | chr8_2:68573016-68573035 | Msa1264930:intron | 20.0% |
| !!! | GAATATTTGATTGACTTTTT+TGG | + | chr8_2:68573101-68573120 | Msa1264930:intron | 20.0% |
| !! | AGAAAAATAAATCACAAAGA+TGG | - | chr8_2:68573268-68573287 | None:intergenic | 20.0% |
| !! | TCAATAGATATGTCATAAAA+TGG | - | chr8_2:68573745-68573764 | None:intergenic | 20.0% |
| !! | AATCTTCACTATATTGAATT+TGG | - | chr8_2:68573824-68573843 | None:intergenic | 20.0% |
| !!! | TTTGTTTGAAATGAAATAGT+AGG | + | chr8_2:68574197-68574216 | Msa1264930:intron | 20.0% |
| !!! | TTTTGTTAAATTTTGGTTGA+TGG | + | chr8_2:68574360-68574379 | Msa1264930:intron | 20.0% |
| !! | CAACAATATTATAACACTAA+AGG | - | chr8_2:68574837-68574856 | None:intergenic | 20.0% |
| !!! | TTTTTTAAACCATAAACATC+TGG | - | chr8_2:68575235-68575254 | None:intergenic | 20.0% |
| !! | AGATGTTTATGGTTTAAAAA+AGG | + | chr8_2:68575234-68575253 | Msa1264930:intron | 20.0% |
| !!! | TTAAAAAAGGTGTAGTTATA+CGG | + | chr8_2:68575247-68575266 | Msa1264930:intron | 20.0% |
| !! | TAAAAGAAGAAAAAAGTTAG+GGG | - | chr8_2:68575839-68575858 | None:intergenic | 20.0% |
| !!! | TAAGCAAAAAACACTTTTTT+AGG | + | chr8_2:68576107-68576126 | Msa1264930:intron | 20.0% |
| !!! | TAAGCAAAAAACACTTTTTA+AGG | - | chr8_2:68576196-68576215 | None:intergenic | 20.0% |
| !! | ATATGAAAGTGAAAGATAAA+TGG | - | chr8_2:68576490-68576509 | None:intergenic | 20.0% |
| !! | TTTCTGTTAACCTAATTATT+AGG | - | chr8_2:68576738-68576757 | None:intergenic | 20.0% |
| !! | GCATATGATAACTAAAAAAT+TGG | - | chr8_2:68577649-68577668 | None:intergenic | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr8_2:68577876-68577895 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr8_2:68577986-68578005 | None:intergenic | 20.0% |
| !! | TATATAAATAAAAGGGAAAG+TGG | - | chr8_2:68578002-68578021 | None:intergenic | 20.0% |
| !! | TTTACTCAAAAATAGAAAGT+TGG | + | chr8_2:68578249-68578268 | Msa1264930:intron | 20.0% |
| !! | TTACTCAAAAATAGAAAGTT+GGG | + | chr8_2:68578250-68578269 | Msa1264930:intron | 20.0% |
| !! | ATATCAAATCAAATTACTGT+GGG | + | chr8_2:68578371-68578390 | Msa1264930:intron | 20.0% |
| !!! | ATTTCAATTCTTTGATTTGA+TGG | - | chr8_2:68578798-68578817 | None:intergenic | 20.0% |
| ! | TGATATTGGAAATCAATGAA+AGG | - | chr8_2:68571101-68571120 | None:intergenic | 25.0% |
| ! | AAATCAAACTAAAGATCAGT+GGG | - | chr8_2:68571257-68571276 | None:intergenic | 25.0% |
| ! | AAAATCAAACTAAAGATCAG+TGG | - | chr8_2:68571258-68571277 | None:intergenic | 25.0% |
| ! | AGTAATACATATTGTATGCA+GGG | - | chr8_2:68571714-68571733 | None:intergenic | 25.0% |
| ! | TAGTAATACATATTGTATGC+AGG | - | chr8_2:68571715-68571734 | None:intergenic | 25.0% |
| ! | ATATATGGTTTCTATGTATG+AGG | + | chr8_2:68571840-68571859 | Msa1264930:intron | 25.0% |
| ! | ATTTAAACATCTTCCTATGT+TGG | + | chr8_2:68571979-68571998 | Msa1264930:intron | 25.0% |
| ! | TTTAAACATCTTCCTATGTT+GGG | + | chr8_2:68571980-68571999 | Msa1264930:intron | 25.0% |
| ! | AAAGGTTCAATACATAACAA+AGG | - | chr8_2:68572163-68572182 | None:intergenic | 25.0% |
| ! | TGTTTATTTCAATCCAATGT+AGG | + | chr8_2:68572435-68572454 | Msa1264930:intron | 25.0% |
| !! | AAATCAAACCCTTTTTGAAT+CGG | - | chr8_2:68572570-68572589 | None:intergenic | 25.0% |
| !!! | TCTTCTCATCATTTTTTTAC+AGG | + | chr8_2:68572589-68572608 | Msa1264930:intron | 25.0% |
| !! | TTTATATGTTTCTATTGTGC+AGG | + | chr8_2:68572749-68572768 | Msa1264930:intron | 25.0% |
| !! | TTCTATTGAATATTTAGGGT+AGG | + | chr8_2:68572780-68572799 | Msa1264930:intron | 25.0% |
| !!! | AAAACATTCTAAAAGCATTC+AGG | - | chr8_2:68572844-68572863 | None:intergenic | 25.0% |
| ! | TTCTATATACACATTTGACA+TGG | + | chr8_2:68572989-68573008 | Msa1264930:intron | 25.0% |
| ! | GAGATAAGTTACATAAACAA+AGG | - | chr8_2:68573044-68573063 | None:intergenic | 25.0% |
| !!! | TTGACTTTTTTGGTTATGAA+AGG | + | chr8_2:68573111-68573130 | Msa1264930:intron | 25.0% |
| !!! | TGTAGTTTTATGATATCAGT+AGG | + | chr8_2:68573341-68573360 | Msa1264930:intron | 25.0% |
| ! | TGATTATTCTACTATCTCAT+TGG | + | chr8_2:68573508-68573527 | Msa1264930:CDS | 25.0% |
| !!! | CTTTGATTATCTATTTTTGG+AGG | + | chr8_2:68573778-68573797 | Msa1264930:intron | 25.0% |
| !!! | ACAGTAGCATTTTTGTTTAT+CGG | + | chr8_2:68573977-68573996 | Msa1264930:intron | 25.0% |
| !!! | TTTTGTTCAATTTTGGTTGA+TGG | + | chr8_2:68574416-68574435 | Msa1264930:intron | 25.0% |
| ! | AACAACAACTAATCTTCATA+GGG | - | chr8_2:68574607-68574626 | None:intergenic | 25.0% |
| ! | AAAAAGATAAAATCCATCCA+GGG | - | chr8_2:68574630-68574649 | None:intergenic | 25.0% |
| ! | AAAAAAGATAAAATCCATCC+AGG | - | chr8_2:68574631-68574650 | None:intergenic | 25.0% |
| ! | GGATGCTGATATATAAAAAA+TGG | + | chr8_2:68574910-68574929 | Msa1264930:intron | 25.0% |
| ! | TATAAAAAATGGCATTGCAA+TGG | + | chr8_2:68574921-68574940 | Msa1264930:intron | 25.0% |
| ! | AACAAAGTTCAAAAGTAACT+TGG | + | chr8_2:68574995-68575014 | Msa1264930:intron | 25.0% |
| !! | ATTGAGAACTTTTACTTCAT+GGG | - | chr8_2:68575024-68575043 | None:intergenic | 25.0% |
| !! | TATTGAGAACTTTTACTTCA+TGG | - | chr8_2:68575025-68575044 | None:intergenic | 25.0% |
| ! | ACATTAAGTAGTAACAGAAA+TGG | - | chr8_2:68575069-68575088 | None:intergenic | 25.0% |
| !! | TTTTCCTAAACATATCTTGA+AGG | - | chr8_2:68575306-68575325 | None:intergenic | 25.0% |
| ! | CTTGCATTGTATTGAAAATA+CGG | + | chr8_2:68575333-68575352 | Msa1264930:intron | 25.0% |
| ! | CATTCCAAGTATGTATTAAT+TGG | + | chr8_2:68575454-68575473 | Msa1264930:intron | 25.0% |
| !!! | CGTATATACGATAATTTGTT+TGG | - | chr8_2:68575637-68575656 | None:intergenic | 25.0% |
| ! | TATAGGTGTGAAATATCATA+AGG | - | chr8_2:68575684-68575703 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAAATGTGAC+CGG | - | chr8_2:68576206-68576225 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAAATGTGAC+CGG | + | chr8_2:68576206-68576225 | Msa1264930:intron | 25.0% |
| ! | GAGAATAAAAAGAAGATAAG+AGG | + | chr8_2:68576261-68576280 | Msa1264930:intron | 25.0% |
| ! | AATAAAAAGAAGATAAGAGG+TGG | + | chr8_2:68576264-68576283 | Msa1264930:intron | 25.0% |
| ! | AAAGAAACGAAAAAGAGAAT+TGG | - | chr8_2:68576426-68576445 | None:intergenic | 25.0% |
| !!! | TTGAAAAGTGTTAATAGCTA+GGG | - | chr8_2:68576517-68576536 | None:intergenic | 25.0% |
| !!! | TTTGAAAAGTGTTAATAGCT+AGG | - | chr8_2:68576518-68576537 | None:intergenic | 25.0% |
| ! | ATAACTATGTTCACACAAAA+AGG | + | chr8_2:68576647-68576666 | Msa1264930:intron | 25.0% |
| ! | AGCAACTTAACCTAATAATT+AGG | + | chr8_2:68576725-68576744 | Msa1264930:intron | 25.0% |
| !! | AAGGATTATTGCATTTTAGA+GGG | - | chr8_2:68576816-68576835 | None:intergenic | 25.0% |
| !! | TAAGGATTATTGCATTTTAG+AGG | - | chr8_2:68576817-68576836 | None:intergenic | 25.0% |
| ! | ATTATCCTTGTCATGTTAAT+TGG | + | chr8_2:68577144-68577163 | Msa1264930:intron | 25.0% |
| ! | TAGTAAACTGACATTAATGT+GGG | - | chr8_2:68577191-68577210 | None:intergenic | 25.0% |
| ! | GCAATTGTGAATTGATTAAT+TGG | + | chr8_2:68577272-68577291 | Msa1264930:intron | 25.0% |
| ! | ACATGTTCAATTAAACTGTT+AGG | + | chr8_2:68577388-68577407 | Msa1264930:intron | 25.0% |
| ! | AAATCAGAGACTATATTGAT+TGG | + | chr8_2:68577487-68577506 | Msa1264930:intron | 25.0% |
| !! | AATCAGAGACTATATTGATT+GGG | + | chr8_2:68577488-68577507 | Msa1264930:intron | 25.0% |
| !! | ACTCTTTCTAAAAAATAGCT+AGG | + | chr8_2:68577675-68577694 | Msa1264930:intron | 25.0% |
| !!! | GTATTTAACTACTTTTGTTG+AGG | + | chr8_2:68577778-68577797 | Msa1264930:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr8_2:68577877-68577896 | None:intergenic | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | - | chr8_2:68577898-68577917 | None:intergenic | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | - | chr8_2:68577899-68577918 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr8_2:68577987-68578006 | None:intergenic | 25.0% |
| ! | GTTGAATTAATATGTACTCT+CGG | - | chr8_2:68578093-68578112 | None:intergenic | 25.0% |
| ! | TAACGGTATTATCTACTTAA+AGG | - | chr8_2:68578208-68578227 | None:intergenic | 25.0% |
| ! | TTGATATGTTTCTTGAATGT+TGG | - | chr8_2:68578358-68578377 | None:intergenic | 25.0% |
| ! | CATATCAAATCAAATTACTG+TGG | + | chr8_2:68578370-68578389 | Msa1264930:intron | 25.0% |
| ! | TATCAAATCAAATTACTGTG+GGG | + | chr8_2:68578372-68578391 | Msa1264930:intron | 25.0% |
| !!! | AAGACATACTTTTGTTTGAT+TGG | - | chr8_2:68578856-68578875 | None:intergenic | 25.0% |
| !! | AAAAGAAAGTGTCACATGTT+TGG | - | chr8_2:68570926-68570945 | None:intergenic | 30.0% |
| !! | TTTTGTTTGTAGGGTATTTG+AGG | + | chr8_2:68571170-68571189 | Msa1264930:intron | 30.0% |
| ! | TTTGTTTGTAGGGTATTTGA+GGG | + | chr8_2:68571171-68571190 | Msa1264930:intron | 30.0% |
| GTTATTCGCGTATTCATATA+TGG | - | chr8_2:68571368-68571387 | None:intergenic | 30.0% | |
| TATGAATACGCGAATAACTT+TGG | + | chr8_2:68571370-68571389 | Msa1264930:intron | 30.0% | |
| ATGAATACGCGAATAACTTT+GGG | + | chr8_2:68571371-68571390 | Msa1264930:intron | 30.0% | |
| TTCCATCTCAAACGTAATTA+CGG | - | chr8_2:68571771-68571790 | None:intergenic | 30.0% | |
| ! | AATTACGTTTGAGATGGAAA+AGG | + | chr8_2:68571772-68571791 | Msa1264930:intron | 30.0% |
| TACGCATATTATAACTGTGT+AGG | + | chr8_2:68571892-68571911 | Msa1264930:intron | 30.0% | |
| TTAAACATCTTCCTATGTTG+GGG | + | chr8_2:68571981-68572000 | Msa1264930:intron | 30.0% | |
| AATTCTATGACCTGTACAAA+TGG | - | chr8_2:68572045-68572064 | None:intergenic | 30.0% | |
| ! | TAGTGCGTCTAATTTTTGTT+TGG | + | chr8_2:68572297-68572316 | Msa1264930:intron | 30.0% |
| !! | AGTGCGTCTAATTTTTGTTT+GGG | + | chr8_2:68572298-68572317 | Msa1264930:intron | 30.0% |
| GATAATTATGTGAAATGCAC+TGG | + | chr8_2:68572873-68572892 | Msa1264930:intron | 30.0% | |
| ! | ATGCAATTGATTCCTGTAAA+TGG | - | chr8_2:68573202-68573221 | None:intergenic | 30.0% |
| CTACATGACATAAAACTACA+TGG | - | chr8_2:68573326-68573345 | None:intergenic | 30.0% | |
| GGTACCATTATCTAATTGTT+TGG | + | chr8_2:68573362-68573381 | Msa1264930:intron | 30.0% | |
| CATTCTTCAATGATTCGATT+CGG | + | chr8_2:68573417-68573436 | Msa1264930:intron | 30.0% | |
| GGAGAAGAATACTATCTATT+AGG | - | chr8_2:68573460-68573479 | None:intergenic | 30.0% | |
| ATAGATAGTATTCTTCTCCA+AGG | + | chr8_2:68573461-68573480 | Msa1264930:intron | 30.0% | |
| CCATTGTTCAAAAAAGAGAA+AGG | - | chr8_2:68573576-68573595 | None:intergenic | 30.0% | |
| !!! | CCTTTCTCTTTTTTGAACAA+TGG | + | chr8_2:68573573-68573592 | Msa1264930:intron | 30.0% |
| CTACAATATGAATAGCAAAG+AGG | - | chr8_2:68574076-68574095 | None:intergenic | 30.0% | |
| !! | TTCGTTTTTATTGTCTTGAC+AGG | + | chr8_2:68574271-68574290 | Msa1264930:intron | 30.0% |
| GAACAACAACTAATCTTCAT+AGG | - | chr8_2:68574608-68574627 | None:intergenic | 30.0% | |
| !!! | GTTCTGTTTGTTTTGTTGTT+TGG | + | chr8_2:68574666-68574685 | Msa1264930:intron | 30.0% |
| !!! | TTTGTTTTGTTGTTTGGATC+TGG | + | chr8_2:68574672-68574691 | Msa1264930:intron | 30.0% |
| CTTTGTTCAATGTAAAAGCA+TGG | - | chr8_2:68574982-68575001 | None:intergenic | 30.0% | |
| TAATTGGTCAATAGCAGAAT+AGG | - | chr8_2:68575127-68575146 | None:intergenic | 30.0% | |
| ! | AATGTATTGGCATTATGTGT+TGG | + | chr8_2:68575155-68575174 | Msa1264930:intron | 30.0% |
| ACTTCCTTCAAGATATGTTT+AGG | + | chr8_2:68575299-68575318 | Msa1264930:intron | 30.0% | |
| ACGTGAATTTCTTGATAGAA+CGG | + | chr8_2:68575902-68575921 | Msa1264930:intron | 30.0% | |
| TTCCTAATTGAAGATTATCG+TGG | + | chr8_2:68576037-68576056 | Msa1264930:intron | 30.0% | |
| TCCTAATTGAAGATTATCGT+GGG | + | chr8_2:68576038-68576057 | Msa1264930:intron | 30.0% | |
| TTCATTGTGCTCTTTATGTA+AGG | + | chr8_2:68576318-68576337 | Msa1264930:intron | 30.0% | |
| ! | AATAAGGTTGTTTGAAGCAT+AGG | - | chr8_2:68576684-68576703 | None:intergenic | 30.0% |
| ATCAGTGAGGAGAAATATTA+AGG | - | chr8_2:68576835-68576854 | None:intergenic | 30.0% | |
| ! | AATGGTTTGCATGGAAATTA+GGG | - | chr8_2:68576973-68576992 | None:intergenic | 30.0% |
| ! | AAATGGTTTGCATGGAAATT+AGG | - | chr8_2:68576974-68576993 | None:intergenic | 30.0% |
| ! | ATTCACAAAAATGGTTTGCA+TGG | - | chr8_2:68576982-68577001 | None:intergenic | 30.0% |
| TTTGAGCGTATTCACAAAAA+TGG | - | chr8_2:68576991-68577010 | None:intergenic | 30.0% | |
| CTAGTAAACTGACATTAATG+TGG | - | chr8_2:68577192-68577211 | None:intergenic | 30.0% | |
| CCTTCATAAAAAACACAAGT+GGG | - | chr8_2:68577591-68577610 | None:intergenic | 30.0% | |
| ACCTTCATAAAAAACACAAG+TGG | - | chr8_2:68577592-68577611 | None:intergenic | 30.0% | |
| AAGTAGTTAAATACTCCTTG+AGG | - | chr8_2:68577772-68577791 | None:intergenic | 30.0% | |
| ATAGAGCTAAGTGATACTAA+TGG | - | chr8_2:68578176-68578195 | None:intergenic | 30.0% | |
| AAGTAGATAATACCGTTAAC+TGG | + | chr8_2:68578210-68578229 | Msa1264930:intron | 30.0% | |
| CAATTCAACTATTCAAGTCA+AGG | - | chr8_2:68578278-68578297 | None:intergenic | 30.0% | |
| ATCAAATCAAATTACTGTGG+GGG | + | chr8_2:68578373-68578392 | Msa1264930:intron | 30.0% | |
| TGTGTTATAAAACCAGCAAA+AGG | - | chr8_2:68578415-68578434 | None:intergenic | 30.0% | |
| TTCTCATGCAAACTATTGTT+TGG | - | chr8_2:68578702-68578721 | None:intergenic | 30.0% | |
| TCAATGAAAGGAAAGAGTAG+AGG | - | chr8_2:68571089-68571108 | None:intergenic | 35.0% | |
| ! | TTGTTTGTAGGGTATTTGAG+GGG | + | chr8_2:68571172-68571191 | Msa1264930:intron | 35.0% |
| CAGCTTATTCAAAAGCAGAA+TGG | - | chr8_2:68571486-68571505 | None:intergenic | 35.0% | |
| AGGAGCTTATAACAACGAAA+AGG | - | chr8_2:68571599-68571618 | None:intergenic | 35.0% | |
| ATGTTCATGTTCATAGTGGT+AGG | - | chr8_2:68571619-68571638 | None:intergenic | 35.0% | |
| TACCACTATGAACATGAACA+TGG | + | chr8_2:68571618-68571637 | Msa1264930:intron | 35.0% | |
| !!! | AAGGCATTGCATATTTTGAC+TGG | + | chr8_2:68571678-68571697 | Msa1264930:intron | 35.0% |
| GCATATTATAACTGTGTAGG+CGG | + | chr8_2:68571895-68571914 | Msa1264930:intron | 35.0% | |
| TAAACATCTTCCTATGTTGG+GGG | + | chr8_2:68571982-68572001 | Msa1264930:intron | 35.0% | |
| ATAACAGTCTCCATTTGTAC+AGG | + | chr8_2:68572032-68572051 | Msa1264930:intron | 35.0% | |
| !!! | CAATCGAGTTTTGTTGCAAT+AGG | - | chr8_2:68572349-68572368 | None:intergenic | 35.0% |
| CTATTGCAACAAAACTCGAT+TGG | + | chr8_2:68572347-68572366 | Msa1264930:intron | 35.0% | |
| ! | ATTTTCCTGGTCATCATCAA+TGG | - | chr8_2:68572380-68572399 | None:intergenic | 35.0% |
| ! | GAAAAAGCTCAAGATTTTCC+TGG | - | chr8_2:68572393-68572412 | None:intergenic | 35.0% |
| TGAATTTCGATCACCTACAT+TGG | - | chr8_2:68572451-68572470 | None:intergenic | 35.0% | |
| ! | ATCAGAATCGCTGATTAGTT+TGG | + | chr8_2:68572484-68572503 | Msa1264930:intron | 35.0% |
| ! | TTTCAAGCAGAGAGCATAAA+GGG | + | chr8_2:68572507-68572526 | Msa1264930:intron | 35.0% |
| AACAGAGAACAGAAAGATAC+TGG | + | chr8_2:68572676-68572695 | Msa1264930:intron | 35.0% | |
| ! | ATATGTTTCTATTGTGCAGG+AGG | + | chr8_2:68572752-68572771 | Msa1264930:intron | 35.0% |
| ATGCTCTCTAATCCATTTAC+AGG | + | chr8_2:68573187-68573206 | Msa1264930:intron | 35.0% | |
| GACGCCAAACAATTAGATAA+TGG | - | chr8_2:68573369-68573388 | None:intergenic | 35.0% | |
| !! | CGATTCGGTTTGATTTCATT+AGG | + | chr8_2:68573432-68573451 | Msa1264930:intron | 35.0% |
| GTGTTGTAGAGAATGAAATG+TGG | + | chr8_2:68573595-68573614 | Msa1264930:intron | 35.0% | |
| !!! | ATTTTGGTTGATGGCAATTC+TGG | + | chr8_2:68574369-68574388 | Msa1264930:intron | 35.0% |
| !!! | ATTTTGGTTGATGGCAATTC+TGG | + | chr8_2:68574369-68574388 | Msa1264930:intron | 35.0% |
| !! | TAAAAGGACTGTTGATAGTG+TGG | + | chr8_2:68574524-68574543 | Msa1264930:intron | 35.0% |
| AGATTGTGTTCGTGTTACAA+TGG | + | chr8_2:68574580-68574599 | Msa1264930:intron | 35.0% | |
| GATCTCAATCCAGATGTTTA+TGG | + | chr8_2:68575223-68575242 | Msa1264930:intron | 35.0% | |
| AGGTGTAGTTATACGGATAA+AGG | + | chr8_2:68575254-68575273 | Msa1264930:intron | 35.0% | |
| ! | AAAATACGGTGTCAACAATG+CGG | + | chr8_2:68575347-68575366 | Msa1264930:intron | 35.0% |
| TGGAATGAGAATTATAGCAC+CGG | - | chr8_2:68575441-68575460 | None:intergenic | 35.0% | |
| GCTGCCAATTAATACATACT+TGG | - | chr8_2:68575461-68575480 | None:intergenic | 35.0% | |
| AGTGTCTATGTCAACATGAT+TGG | - | chr8_2:68575492-68575511 | None:intergenic | 35.0% | |
| AATCATGTTGACATAGACAC+TGG | + | chr8_2:68575491-68575510 | Msa1264930:intron | 35.0% | |
| CGTGAATTTCTTGATAGAAC+GGG | + | chr8_2:68575903-68575922 | Msa1264930:intron | 35.0% | |
| TCCCACGATAATCTTCAATT+AGG | - | chr8_2:68576042-68576061 | None:intergenic | 35.0% | |
| AAAAAGATAGATACTCCCTC+CGG | + | chr8_2:68576075-68576094 | Msa1264930:intron | 35.0% | |
| AAAAGAGAATTGGCATGATC+CGG | - | chr8_2:68576416-68576435 | None:intergenic | 35.0% | |
| AGGCATATAGTTAGGATATG+AGG | - | chr8_2:68576454-68576473 | None:intergenic | 35.0% | |
| ! | GTTTGAAGCATAGGATAGTT+AGG | - | chr8_2:68576675-68576694 | None:intergenic | 35.0% |
| !! | CATTTTAGAGGGAATGTGTT+AGG | - | chr8_2:68576805-68576824 | None:intergenic | 35.0% |
| GTCGCACATGTTTATTGTTA+AGG | - | chr8_2:68577090-68577109 | None:intergenic | 35.0% | |
| CATGTCCAATTAACATGACA+AGG | - | chr8_2:68577152-68577171 | None:intergenic | 35.0% | |
| CTGACATTAATGTGGGATTA+AGG | - | chr8_2:68577184-68577203 | None:intergenic | 35.0% | |
| TTGATGTGAGATCAATGTAG+AGG | + | chr8_2:68577361-68577380 | Msa1264930:intron | 35.0% | |
| TGATGTGAGATCAATGTAGA+GGG | + | chr8_2:68577362-68577381 | Msa1264930:intron | 35.0% | |
| !!! | CCCACTTGTGTTTTTTATGA+AGG | + | chr8_2:68577588-68577607 | Msa1264930:intron | 35.0% |
| ATCTTAACCACATACACCTT+AGG | + | chr8_2:68577614-68577633 | Msa1264930:intron | 35.0% | |
| TCTTAACCACATACACCTTA+GGG | + | chr8_2:68577615-68577634 | Msa1264930:intron | 35.0% | |
| AAATTGGTGAATACACCCTA+AGG | - | chr8_2:68577633-68577652 | None:intergenic | 35.0% | |
| GTATCCTAGCAAATGTTTGT+AGG | + | chr8_2:68577699-68577718 | Msa1264930:intron | 35.0% | |
| AACTCCTACAAACATTTGCT+AGG | - | chr8_2:68577706-68577725 | None:intergenic | 35.0% | |
| ! | GTTGTTCAAGACTTTTGTTG+AGG | + | chr8_2:68577815-68577834 | Msa1264930:intron | 35.0% |
| AGAAAATGGGTCAGTTATTC+CGG | - | chr8_2:68577863-68577882 | None:intergenic | 35.0% | |
| ! | GCTAAGTGATACTAATGGAT+TGG | - | chr8_2:68578171-68578190 | None:intergenic | 35.0% |
| CAAAACTCTACACCAGTTAA+CGG | - | chr8_2:68578225-68578244 | None:intergenic | 35.0% | |
| !! | TAACTGGTGTAGAGTTTTGT+AGG | + | chr8_2:68578226-68578245 | Msa1264930:intron | 35.0% |
| ! | CTTAATTGACTACCTTTTGC+TGG | + | chr8_2:68578400-68578419 | Msa1264930:intron | 35.0% |
| ! | CCATGCAATTTTTATGCATG+TGG | - | chr8_2:68578676-68578695 | None:intergenic | 35.0% |
| CCACATGCATAAAAATTGCA+TGG | + | chr8_2:68578673-68578692 | Msa1264930:intron | 35.0% | |
| AATTTCATCATATGCTCCGA+AGG | + | chr8_2:68578747-68578766 | Msa1264930:intron | 35.0% | |
| ! | AAAGTGTCACATGTTTGGTC+TGG | - | chr8_2:68570921-68570940 | None:intergenic | 40.0% |
| ! | ATGGCTTCTTTCTCTTTTGC+TGG | - | chr8_2:68570991-68571010 | None:intergenic | 40.0% |
| CGATCGATGTGTTACATGTT+GGG | + | chr8_2:68571026-68571045 | Msa1264930:exon | 40.0% | |
| ACACTCACATTACGTCAACA+TGG | - | chr8_2:68571558-68571577 | None:intergenic | 40.0% | |
| ! | GTAATGTGAGTGTCACTAGA+AGG | + | chr8_2:68571565-68571584 | Msa1264930:intron | 40.0% |
| CTCCATGTTCATGTTCATAG+TGG | - | chr8_2:68571623-68571642 | None:intergenic | 40.0% | |
| ! | ATGAACATGGAGTCTGAGAT+CGG | + | chr8_2:68571631-68571650 | Msa1264930:intron | 40.0% |
| ATATCGAAGTAGAGACACGA+AGG | + | chr8_2:68571659-68571678 | Msa1264930:intron | 40.0% | |
| AATTACGGCAACAACAGAAC+AGG | - | chr8_2:68571756-68571775 | None:intergenic | 40.0% | |
| TGCCGTAATTACGTTTGAGA+TGG | + | chr8_2:68571766-68571785 | Msa1264930:intron | 40.0% | |
| TGTGAAACAGTTTCCGTCTA+TGG | - | chr8_2:68572093-68572112 | None:intergenic | 40.0% | |
| TGCAACAAAACTCGATTGGT+TGG | + | chr8_2:68572351-68572370 | Msa1264930:intron | 40.0% | |
| ! | GTTTCAAGCAGAGAGCATAA+AGG | + | chr8_2:68572506-68572525 | Msa1264930:intron | 40.0% |
| !! | TTCCGCTTACCGATTCAAAA+AGG | + | chr8_2:68572558-68572577 | Msa1264930:intron | 40.0% |
| !! | TCCGCTTACCGATTCAAAAA+GGG | + | chr8_2:68572559-68572578 | Msa1264930:intron | 40.0% |
| ! | ACCCTTTTTGAATCGGTAAG+CGG | - | chr8_2:68572563-68572582 | None:intergenic | 40.0% |
| TACTGGATGCTACACATCTA+TGG | + | chr8_2:68572693-68572712 | Msa1264930:intron | 40.0% | |
| ! | GTTTCATGGCAAGAAAGTGT+TGG | + | chr8_2:68573075-68573094 | Msa1264930:intron | 40.0% |
| CTTGATCAGCTAAACTTCCT+TGG | - | chr8_2:68573481-68573500 | None:intergenic | 40.0% | |
| CTCATTGGATGCATCTCTAA+AGG | + | chr8_2:68573523-68573542 | Msa1264930:CDS | 40.0% | |
| AAGGAGAGTTTGAACACGTA+AGG | + | chr8_2:68573542-68573561 | Msa1264930:intron | 40.0% | |
| !!! | TCTATTTTTGGAGGCTTCAG+TGG | + | chr8_2:68573787-68573806 | Msa1264930:intron | 40.0% |
| TTGCATTTGTGCGATTGTTG+AGG | + | chr8_2:68574239-68574258 | Msa1264930:intron | 40.0% | |
| ACAAAGGATGTGCTAGAACT+TGG | + | chr8_2:68574555-68574574 | Msa1264930:intron | 40.0% | |
| CAAAGGATGTGCTAGAACTT+GGG | + | chr8_2:68574556-68574575 | Msa1264930:intron | 40.0% | |
| AAAGGATGTGCTAGAACTTG+GGG | + | chr8_2:68574557-68574576 | Msa1264930:intron | 40.0% | |
| ! | GAAGATTAGTTGTTGTTCCC+TGG | + | chr8_2:68574610-68574629 | Msa1264930:intron | 40.0% |
| ! | ATTAGTTGTTGTTCCCTGGA+TGG | + | chr8_2:68574614-68574633 | Msa1264930:intron | 40.0% |
| CCTCATGATCTATTTGGCAT+TGG | - | chr8_2:68574892-68574911 | None:intergenic | 40.0% | |
| CCAATGCCAAATAGATCATG+AGG | + | chr8_2:68574889-68574908 | Msa1264930:intron | 40.0% | |
| CAGCATCCTCATGATCTATT+TGG | - | chr8_2:68574898-68574917 | None:intergenic | 40.0% | |
| ! | CAATGTAAAAGCATGGAGCA+AGG | - | chr8_2:68574975-68574994 | None:intergenic | 40.0% |
| TCAACAATGCGGTTTCTTCT+TGG | + | chr8_2:68575358-68575377 | Msa1264930:intron | 40.0% | |
| AACCATGTTGACACATATGC+CGG | + | chr8_2:68575419-68575438 | Msa1264930:intron | 40.0% | |
| TGAACTATATATGACCCGTG+CGG | + | chr8_2:68575733-68575752 | Msa1264930:intron | 40.0% | |
| CTTGATAGAACGGGTATAGA+TGG | + | chr8_2:68575912-68575931 | Msa1264930:intron | 40.0% | |
| ACGGGTATAGATGGACAAAA+AGG | + | chr8_2:68575921-68575940 | Msa1264930:intron | 40.0% | |
| CGGGTATAGATGGACAAAAA+GGG | + | chr8_2:68575922-68575941 | Msa1264930:intron | 40.0% | |
| AGATTATCGTGGGAAACAAG+TGG | + | chr8_2:68576048-68576067 | Msa1264930:intron | 40.0% | |
| GATTATCGTGGGAAACAAGT+GGG | + | chr8_2:68576049-68576068 | Msa1264930:intron | 40.0% | |
| ATTATCGTGGGAAACAAGTG+GGG | + | chr8_2:68576050-68576069 | Msa1264930:intron | 40.0% | |
| TGCTTATAAATGTGACCGGA+GGG | - | chr8_2:68576210-68576229 | None:intergenic | 40.0% | |
| TTGCTTATAAATGTGACCGG+AGG | - | chr8_2:68576209-68576228 | None:intergenic | 40.0% | |
| TTGCTTATAAATGTGACCGG+AGG | + | chr8_2:68576209-68576228 | Msa1264930:intron | 40.0% | |
| TGCTTATAAATGTGACCGGA+GGG | + | chr8_2:68576210-68576229 | Msa1264930:intron | 40.0% | |
| AGGGAGTAAATAACAAGGCA+AGG | + | chr8_2:68576229-68576248 | Msa1264930:intron | 40.0% | |
| !! | TCACTTTTGAAAGGCACATG+TGG | + | chr8_2:68576291-68576310 | Msa1264930:intron | 40.0% |
| !! | CACTTTTGAAAGGCACATGT+GGG | + | chr8_2:68576292-68576311 | Msa1264930:intron | 40.0% |
| !! | ACTTTTGAAAGGCACATGTG+GGG | + | chr8_2:68576293-68576312 | Msa1264930:intron | 40.0% |
| CTACAAGAATTCGAATTCCC+GGG | - | chr8_2:68576364-68576383 | None:intergenic | 40.0% | |
| CCTACAAGAATTCGAATTCC+CGG | - | chr8_2:68576365-68576384 | None:intergenic | 40.0% | |
| ! | ACTCGTATAGGCATGTTTTC+CGG | + | chr8_2:68576394-68576413 | Msa1264930:intron | 40.0% |
| GAATGAAAAGCTCATCAGTG+AGG | - | chr8_2:68576848-68576867 | None:intergenic | 40.0% | |
| GATGTGAGATCAATGTAGAG+GGG | + | chr8_2:68577363-68577382 | Msa1264930:intron | 40.0% | |
| AATACACCCTAAGGTGTATG+TGG | - | chr8_2:68577624-68577643 | None:intergenic | 40.0% | |
| ! | TTTTAGCAACATGCACCTCA+AGG | + | chr8_2:68577754-68577773 | Msa1264930:intron | 40.0% |
| GAAAATGGGTCAGTTATTCC+GGG | - | chr8_2:68577862-68577881 | None:intergenic | 40.0% | |
| AATCTGTGTGATATGAGCCA+AGG | + | chr8_2:68578030-68578049 | Msa1264930:intron | 40.0% | |
| ATCTGTGTGATATGAGCCAA+GGG | + | chr8_2:68578031-68578050 | Msa1264930:intron | 40.0% | |
| AGCCAAGGGGTCAAATAAAT+TGG | + | chr8_2:68578045-68578064 | Msa1264930:intron | 40.0% | |
| GCCAAGGGGTCAAATAAATT+GGG | + | chr8_2:68578046-68578065 | Msa1264930:intron | 40.0% | |
| TCCCAATTTATTTGACCCCT+TGG | - | chr8_2:68578050-68578069 | None:intergenic | 40.0% | |
| AGGGGTCAAATAAATTGGGA+CGG | + | chr8_2:68578050-68578069 | Msa1264930:intron | 40.0% | |
| GTCAAATAAATTGGGACGGA+GGG | + | chr8_2:68578054-68578073 | Msa1264930:intron | 40.0% | |
| ATGCTCGTTGTAGTGAGAGA+GGG | - | chr8_2:68570966-68570985 | None:intergenic | 45.0% | |
| ACATGTAACACATCGATCGC+AGG | - | chr8_2:68571025-68571044 | None:intergenic | 45.0% | |
| GCGATCGATGTGTTACATGT+TGG | + | chr8_2:68571025-68571044 | Msa1264930:exon | 45.0% | |
| ! | GCGTGCGTTCTTGATGATAT+TGG | - | chr8_2:68571115-68571134 | None:intergenic | 45.0% |
| AAATGTTTCGCCCCCAACAT+AGG | - | chr8_2:68571995-68572014 | None:intergenic | 45.0% | |
| GTATCGTAGACCTCCATAGA+CGG | + | chr8_2:68572077-68572096 | Msa1264930:intron | 45.0% | |
| GAAACAGTTTCCGTCTATGG+AGG | - | chr8_2:68572090-68572109 | None:intergenic | 45.0% | |
| TTCCTGGTCATCATCAATGG+TGG | - | chr8_2:68572377-68572396 | None:intergenic | 45.0% | |
| CTCGATCAAGTGACGTTTCA+TGG | + | chr8_2:68573061-68573080 | Msa1264930:intron | 45.0% | |
| TTGTCTTGACAGGTACGCAA+AGG | + | chr8_2:68574281-68574300 | Msa1264930:intron | 45.0% | |
| TGTCTTGACAGGTACGCAAA+GGG | + | chr8_2:68574282-68574301 | Msa1264930:intron | 45.0% | |
| !! | ATCCTTGTGCTGAGTTTTGG+TGG | - | chr8_2:68574466-68574485 | None:intergenic | 45.0% |
| ! | TGCATCCTTGTGCTGAGTTT+TGG | - | chr8_2:68574469-68574488 | None:intergenic | 45.0% |
| TAGTGTGGAGTCTGCTACAA+AGG | + | chr8_2:68574539-68574558 | Msa1264930:intron | 45.0% | |
| CCAACAGTACGGAAAACAGA+AGG | - | chr8_2:68574744-68574763 | None:intergenic | 45.0% | |
| ! | CCTTCTGTTTTCCGTACTGT+TGG | + | chr8_2:68574741-68574760 | Msa1264930:intron | 45.0% |
| AAGCATGGAGCAAGGATCAT+TGG | - | chr8_2:68574967-68574986 | None:intergenic | 45.0% | |
| TTAGAGTCTCAAGTGTGCAG+TGG | - | chr8_2:68575280-68575299 | None:intergenic | 45.0% | |
| GGCATATGTGTCAACATGGT+TGG | - | chr8_2:68575420-68575439 | None:intergenic | 45.0% | |
| ACCGGAGGGAGTAAATAACA+AGG | + | chr8_2:68576224-68576243 | Msa1264930:intron | 45.0% | |
| !! | GCCTTGTTATTTACTCCCTC+CGG | - | chr8_2:68576228-68576247 | None:intergenic | 45.0% |
| ATAACAAGGCAAGGAGAGAG+AGG | + | chr8_2:68576238-68576257 | Msa1264930:intron | 45.0% | |
| TAACAAGGCAAGGAGAGAGA+GGG | + | chr8_2:68576239-68576258 | Msa1264930:intron | 45.0% | |
| !! | GGTGGAAGCTCACTTTTGAA+AGG | + | chr8_2:68576282-68576301 | Msa1264930:intron | 45.0% |
| CCGGGAATTCGAATTCTTGT+AGG | + | chr8_2:68576362-68576381 | Msa1264930:intron | 45.0% | |
| TCTGTGTGATATGAGCCAAG+GGG | + | chr8_2:68578032-68578051 | Msa1264930:intron | 45.0% | |
| GGTCAAATAAATTGGGACGG+AGG | + | chr8_2:68578053-68578072 | Msa1264930:intron | 45.0% | |
| ! | AAGAACAAGAGCACAGCCTT+CGG | - | chr8_2:68578766-68578785 | None:intergenic | 45.0% |
| !! | CTTTTGTTTGATTGGCACGC+TGG | - | chr8_2:68578848-68578867 | None:intergenic | 45.0% |
| !!! | TATATATTTTTGTTAAATTT+TGG | + | chr8_2:68574353-68574372 | Msa1264930:intron | 5.0% |
| !! | AGAAAAATATATAAATAAAA+GGG | - | chr8_2:68578009-68578028 | None:intergenic | 5.0% |
| !! | AAGAAAAATATATAAATAAA+AGG | - | chr8_2:68578010-68578029 | None:intergenic | 5.0% |
| !!! | TTTTTATATTTTTAAAACTT+TGG | - | chr8_2:68578552-68578571 | None:intergenic | 5.0% |
| !!! | AATTAATAACATTTTTTATT+CGG | - | chr8_2:68578731-68578750 | None:intergenic | 5.0% |
| GTTGTAGTGAGAGAGGGAGA+GGG | - | chr8_2:68570960-68570979 | None:intergenic | 50.0% | |
| GATGCTCGTTGTAGTGAGAG+AGG | - | chr8_2:68570967-68570986 | None:intergenic | 50.0% | |
| ATCGCAGGAAGGAGTTGCAA+TGG | - | chr8_2:68571010-68571029 | None:intergenic | 50.0% | |
| GTAACACATCGATCGCAGGA+AGG | - | chr8_2:68571021-68571040 | None:intergenic | 50.0% | |
| CATCAAGAACGCACGCTACA+AGG | + | chr8_2:68571119-68571138 | Msa1264930:CDS | 50.0% | |
| ! | ATGGCAATTCTGGCTGAGTG+TGG | + | chr8_2:68574379-68574398 | Msa1264930:intron | 50.0% |
| ! | ATGGCAATTCTGGCTGAGTG+TGG | + | chr8_2:68574379-68574398 | Msa1264930:intron | 50.0% |
| CTCCACCAAAACTCAGCACA+AGG | + | chr8_2:68574461-68574480 | Msa1264930:intron | 50.0% | |
| CACAAGGATGCAGTCGATGA+AGG | + | chr8_2:68574477-68574496 | Msa1264930:intron | 50.0% | |
| TTACCAACGACCTTGCTGCA+CGG | - | chr8_2:68574507-68574526 | None:intergenic | 50.0% | |
| ! | GCAGCAAGGTCGTTGGTAAA+AGG | + | chr8_2:68574508-68574527 | Msa1264930:intron | 50.0% |
| TCGTTGCTCGACCAACAGTA+CGG | - | chr8_2:68574755-68574774 | None:intergenic | 50.0% | |
| CACCGGCATATGTGTCAACA+TGG | - | chr8_2:68575424-68575443 | None:intergenic | 50.0% | |
| ATTCGAATTCCCGGGCACTT+GGG | - | chr8_2:68576356-68576375 | None:intergenic | 50.0% | |
| AATTCGAATTCCCGGGCACT+TGG | - | chr8_2:68576357-68576376 | None:intergenic | 50.0% | |
| AGGACCTGACAGACTCGTAT+AGG | + | chr8_2:68576382-68576401 | Msa1264930:intron | 50.0% | |
| CATGCCTATACGAGTCTGTC+AGG | - | chr8_2:68576389-68576408 | None:intergenic | 50.0% | |
| CGTGGCGTAGGCATATAGTT+AGG | - | chr8_2:68576462-68576481 | None:intergenic | 50.0% | |
| GAAAGATAAATGGCCGCACG+TGG | - | chr8_2:68576480-68576499 | None:intergenic | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | - | chr8_2:68577858-68577877 | None:intergenic | 50.0% | |
| CGTTGTAGTGAGAGAGGGAG+AGG | - | chr8_2:68570961-68570980 | None:intergenic | 55.0% | |
| !! | GGCCACCATTGATGATGACC+AGG | + | chr8_2:68572372-68572391 | Msa1264930:intron | 55.0% |
| ATGCCAAATCCCCAAGTGCC+CGG | + | chr8_2:68576343-68576362 | Msa1264930:intron | 55.0% | |
| TTCGAATTCCCGGGCACTTG+GGG | - | chr8_2:68576355-68576374 | None:intergenic | 55.0% | |
| CTATATGCCTACGCCACGTG+CGG | + | chr8_2:68576464-68576483 | Msa1264930:intron | 55.0% | |
| GTAGAATACTCCCTCCGTCC+CGG | + | chr8_2:68577841-68577860 | Msa1264930:intron | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | chr8_2:68577854-68577873 | None:intergenic | 55.0% | |
| GTGAGAGAGGGAGAGGGAGA+GGG | - | chr8_2:68570954-68570973 | None:intergenic | 60.0% | |
| AGTGAGAGAGGGAGAGGGAG+AGG | - | chr8_2:68570955-68570974 | None:intergenic | 60.0% | |
| ! | TGAAGGCATGCCGTGCAGCA+AGG | + | chr8_2:68574494-68574513 | Msa1264930:intron | 60.0% |
| ATGCCGTGCAGCAAGGTCGT+TGG | + | chr8_2:68574501-68574520 | Msa1264930:intron | 60.0% | |
| ATATGACCCGTGCGGCAGCA+CGG | + | chr8_2:68575741-68575760 | Msa1264930:intron | 60.0% | |
| ! | TTTTCACCCGTGCTGCCGCA+CGG | - | chr8_2:68575751-68575770 | None:intergenic | 60.0% |
| TGCCAAATCCCCAAGTGCCC+GGG | + | chr8_2:68576344-68576363 | Msa1264930:intron | 60.0% | |
| TTCCCGGGCACTTGGGGATT+TGG | - | chr8_2:68576349-68576368 | None:intergenic | 60.0% | |
| TAAATGGCCGCACGTGGCGT+AGG | - | chr8_2:68576474-68576493 | None:intergenic | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | - | chr8_2:68577855-68577874 | None:intergenic | 60.0% | |
| AGAGGGAGAGGGAGAGGGAG+AGG | - | chr8_2:68570949-68570968 | None:intergenic | 65.0% | |
| TATGACCCGTGCGGCAGCAC+GGG | + | chr8_2:68575742-68575761 | Msa1264930:intron | 65.0% | |
| TTTCACCCGTGCTGCCGCAC+GGG | - | chr8_2:68575750-68575769 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 68570896 | 68578902 | 68570896 | ID=Msa1264930;Name=Msa1264930 |
| chr8_2 | mRNA | 68570896 | 68578902 | 68570896 | ID=Msa1264930-mRNA-1;Parent=Msa1264930;Name=Msa1264930-mRNA-1;_AED=0.39;_eAED=0.39;_QI=136|0|0.33|0.66|0|0|3|0|69 |
| chr8_2 | exon | 68570896 | 68571140 | 68570896 | ID=Msa1264930-mRNA-1:exon:22712;Parent=Msa1264930-mRNA-1 |
| chr8_2 | exon | 68573465 | 68573558 | 68573465 | ID=Msa1264930-mRNA-1:exon:22713;Parent=Msa1264930-mRNA-1 |
| chr8_2 | exon | 68578899 | 68578902 | 68578899 | ID=Msa1264930-mRNA-1:exon:22714;Parent=Msa1264930-mRNA-1 |
| chr8_2 | five_prime_UTR | 68570896 | 68571031 | 68570896 | ID=Msa1264930-mRNA-1:five_prime_utr;Parent=Msa1264930-mRNA-1 |
| chr8_2 | CDS | 68571032 | 68571140 | 68571032 | ID=Msa1264930-mRNA-1:cds;Parent=Msa1264930-mRNA-1 |
| chr8_2 | CDS | 68573465 | 68573558 | 68573465 | ID=Msa1264930-mRNA-1:cds;Parent=Msa1264930-mRNA-1 |
| chr8_2 | CDS | 68578899 | 68578902 | 68578899 | ID=Msa1264930-mRNA-1:cds;Parent=Msa1264930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
