Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0899430 | XP_039690907.1 | 89.908 | 109 | 11 | 0 | 1 | 109 | 70 | 178 | 1.64e-26 | 107 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015400 | Msa0899430 | 0.818741 | 1.673024e-52 | -8.615850e-47 |
| Msa0016580 | Msa0899430 | 0.806261 | 8.965542e-50 | -8.615850e-47 |
| Msa0018650 | Msa0899430 | 0.827313 | 1.676477e-54 | -8.615850e-47 |
| Msa0031520 | Msa0899430 | 0.803421 | 3.514164e-49 | -8.615850e-47 |
| Msa0032330 | Msa0899430 | 0.803787 | 2.951087e-49 | -8.615850e-47 |
| Msa0044330 | Msa0899430 | 0.806219 | 9.148426e-50 | -8.615850e-47 |
| Msa0047110 | Msa0899430 | 0.800301 | 1.536565e-48 | -8.615850e-47 |
| Msa0062860 | Msa0899430 | 0.814423 | 1.552217e-51 | -8.615850e-47 |
| Msa0075470 | Msa0899430 | 0.807981 | 3.875780e-50 | -8.615850e-47 |
| Msa0076220 | Msa0899430 | 0.800771 | 1.232693e-48 | -8.615850e-47 |
| Msa0092630 | Msa0899430 | 0.808525 | 2.967764e-50 | -8.615850e-47 |
| Msa0095970 | Msa0899430 | 0.801329 | 9.478693e-49 | -8.615850e-47 |
| Msa0099210 | Msa0899430 | 0.819507 | 1.120058e-52 | -8.615850e-47 |
| Msa0105070 | Msa0899430 | 0.819748 | 9.868047e-53 | -8.615850e-47 |
| Msa0107580 | Msa0899430 | 0.805183 | 1.509558e-49 | -8.615850e-47 |
| Msa0112590 | Msa0899430 | 0.822876 | 1.873202e-53 | -8.615850e-47 |
| Msa0120300 | Msa0899430 | 0.805738 | 1.154889e-49 | -8.615850e-47 |
| Msa0602980 | Msa0899430 | 0.830605 | 2.672531e-55 | -8.615850e-47 |
| Msa0604350 | Msa0899430 | 0.815423 | 9.313885e-52 | -8.615850e-47 |
| Msa0610800 | Msa0899430 | 0.824082 | 9.787907e-54 | -8.615850e-47 |
| Msa0613440 | Msa0899430 | 0.800270 | 1.558993e-48 | -8.615850e-47 |
| Msa0615010 | Msa0899430 | 0.816861 | 4.445263e-52 | -8.615850e-47 |
| Msa0618470 | Msa0899430 | 0.809287 | 2.038782e-50 | -8.615850e-47 |
| Msa0632740 | Msa0899430 | 0.809342 | 1.983666e-50 | -8.615850e-47 |
| Msa0639610 | Msa0899430 | 0.819153 | 1.348484e-52 | -8.615850e-47 |
| Msa0645300 | Msa0899430 | 0.863601 | 2.215634e-64 | -8.615850e-47 |
| Msa0649000 | Msa0899430 | 0.809642 | 1.710935e-50 | -8.615850e-47 |
| Msa0649110 | Msa0899430 | 0.804818 | 1.799533e-49 | -8.615850e-47 |
| Msa0650630 | Msa0899430 | 0.866286 | 3.186394e-65 | -8.615850e-47 |
| Msa0672690 | Msa0899430 | 0.803596 | 3.232876e-49 | -8.615850e-47 |
| Msa0675690 | Msa0899430 | 0.802752 | 4.834079e-49 | -8.615850e-47 |
| Msa0694370 | Msa0899430 | 0.818769 | 1.649303e-52 | -8.615850e-47 |
| Msa0701010 | Msa0899430 | 0.875728 | 2.451031e-68 | -8.615850e-47 |
| Msa0703120 | Msa0899430 | 0.832007 | 1.208397e-55 | -8.615850e-47 |
| Msa0703780 | Msa0899430 | 0.819782 | 9.692218e-53 | -8.615850e-47 |
| Msa0718100 | Msa0899430 | 0.835647 | 1.485767e-56 | -8.615850e-47 |
| Msa0725850 | Msa0899430 | 0.800981 | 1.116620e-48 | -8.615850e-47 |
| Msa0729800 | Msa0899430 | 0.857739 | 1.329090e-62 | -8.615850e-47 |
| Msa0731550 | Msa0899430 | 0.807109 | 5.935419e-50 | -8.615850e-47 |
| Msa0731560 | Msa0899430 | 0.803655 | 3.143149e-49 | -8.615850e-47 |
| Msa0731940 | Msa0899430 | 0.843331 | 1.496384e-58 | -8.615850e-47 |
| Msa0732540 | Msa0899430 | 0.824427 | 8.120779e-54 | -8.615850e-47 |
| Msa0733290 | Msa0899430 | 0.819001 | 1.460696e-52 | -8.615850e-47 |
| Msa0738500 | Msa0899430 | 0.822023 | 2.956946e-53 | -8.615850e-47 |
| Msa0743810 | Msa0899430 | 0.827076 | 1.909972e-54 | -8.615850e-47 |
| Msa0745060 | Msa0899430 | 0.800991 | 1.111304e-48 | -8.615850e-47 |
| Msa0748970 | Msa0899430 | 0.840823 | 6.894601e-58 | -8.615850e-47 |
| Msa0750650 | Msa0899430 | 0.804436 | 2.162083e-49 | -8.615850e-47 |
| Msa0753720 | Msa0899430 | 0.815954 | 7.093159e-52 | -8.615850e-47 |
| Msa0755180 | Msa0899430 | 0.829605 | 4.689016e-55 | -8.615850e-47 |
| Msa0756460 | Msa0899430 | 0.821607 | 3.690085e-53 | -8.615850e-47 |
| Msa0760130 | Msa0899430 | 0.819621 | 1.054933e-52 | -8.615850e-47 |
| Msa0766630 | Msa0899430 | 0.826656 | 2.406309e-54 | -8.615850e-47 |
| Msa0767760 | Msa0899430 | 0.820886 | 5.413005e-53 | -8.615850e-47 |
| Msa0768290 | Msa0899430 | 0.878248 | 3.273341e-69 | -8.615850e-47 |
| Msa0768370 | Msa0899430 | 0.910991 | 1.006763e-82 | -8.615850e-47 |
| Msa0773180 | Msa0899430 | 0.848269 | 6.826558e-60 | -8.615850e-47 |
| Msa0775300 | Msa0899430 | 0.812321 | 4.497541e-51 | -8.615850e-47 |
| Msa0783160 | Msa0899430 | 0.821859 | 3.227735e-53 | -8.615850e-47 |
| Msa0784290 | Msa0899430 | 0.872342 | 3.424575e-67 | -8.615850e-47 |
| Msa0784300 | Msa0899430 | 0.863310 | 2.727480e-64 | -8.615850e-47 |
| Msa0787120 | Msa0899430 | 0.805607 | 1.230009e-49 | -8.615850e-47 |
| Msa0808010 | Msa0899430 | 0.849952 | 2.323931e-60 | -8.615850e-47 |
| Msa0808020 | Msa0899430 | 0.843199 | 1.622559e-58 | -8.615850e-47 |
| Msa0810220 | Msa0899430 | 0.819149 | 1.351289e-52 | -8.615850e-47 |
| Msa0810270 | Msa0899430 | 0.801631 | 8.221471e-49 | -8.615850e-47 |
| Msa0811270 | Msa0899430 | 0.820245 | 7.593947e-53 | -8.615850e-47 |
| Msa0814600 | Msa0899430 | 0.801272 | 9.735528e-49 | -8.615850e-47 |
| Msa0820850 | Msa0899430 | 0.837679 | 4.507211e-57 | -8.615850e-47 |
| Msa0824390 | Msa0899430 | 0.815650 | 8.292426e-52 | -8.615850e-47 |
| Msa0824590 | Msa0899430 | 0.893526 | 5.790910e-75 | -8.615850e-47 |
| Msa0824600 | Msa0899430 | 0.845397 | 4.165006e-59 | -8.615850e-47 |
| Msa0825860 | Msa0899430 | 0.808582 | 2.885640e-50 | -8.615850e-47 |
| Msa0826320 | Msa0899430 | 0.803084 | 4.126234e-49 | -8.615850e-47 |
| Msa0832340 | Msa0899430 | 0.816282 | 5.992459e-52 | -8.615850e-47 |
| Msa0833290 | Msa0899430 | 0.809924 | 1.487588e-50 | -8.615850e-47 |
| Msa0123810 | Msa0899430 | 0.801477 | 8.841204e-49 | -8.615850e-47 |
| Msa0127800 | Msa0899430 | 0.802815 | 4.690291e-49 | -8.615850e-47 |
| Msa0131770 | Msa0899430 | 0.818664 | 1.742141e-52 | -8.615850e-47 |
| Msa0135660 | Msa0899430 | 0.846584 | 1.981393e-59 | -8.615850e-47 |
| Msa0158480 | Msa0899430 | 0.807748 | 4.343170e-50 | -8.615850e-47 |
| Msa0175740 | Msa0899430 | 0.805442 | 1.332019e-49 | -8.615850e-47 |
| Msa0180500 | Msa0899430 | 0.846775 | 1.756980e-59 | -8.615850e-47 |
| Msa0182740 | Msa0899430 | 0.802976 | 4.345434e-49 | -8.615850e-47 |
| Msa0188460 | Msa0899430 | 0.807744 | 4.351669e-50 | -8.615850e-47 |
| Msa0198910 | Msa0899430 | 0.834057 | 3.735597e-56 | -8.615850e-47 |
| Msa0200000 | Msa0899430 | 0.814343 | 1.616730e-51 | -8.615850e-47 |
| Msa0227480 | Msa0899430 | 0.827941 | 1.184740e-54 | -8.615850e-47 |
| Msa0232850 | Msa0899430 | 0.802134 | 6.479486e-49 | -8.615850e-47 |
| Msa0233080 | Msa0899430 | 0.852666 | 3.974412e-61 | -8.615850e-47 |
| Msa0233300 | Msa0899430 | 0.811111 | 8.245255e-51 | -8.615850e-47 |
| Msa0365500 | Msa0899430 | 0.823408 | 1.407920e-53 | -8.615850e-47 |
| Msa0369730 | Msa0899430 | 0.812594 | 3.920105e-51 | -8.615850e-47 |
| Msa0370450 | Msa0899430 | 0.830271 | 3.226280e-55 | -8.615850e-47 |
| Msa0371730 | Msa0899430 | 0.827086 | 1.899434e-54 | -8.615850e-47 |
| Msa0375870 | Msa0899430 | 0.827826 | 1.262083e-54 | -8.615850e-47 |
| Msa0381610 | Msa0899430 | -0.802747 | 4.844512e-49 | -8.615850e-47 |
| Msa0384890 | Msa0899430 | 0.846406 | 2.216508e-59 | -8.615850e-47 |
| Msa0385840 | Msa0899430 | 0.804949 | 1.689491e-49 | -8.615850e-47 |
| Msa0391430 | Msa0899430 | 0.805404 | 1.357287e-49 | -8.615850e-47 |
| Msa0413410 | Msa0899430 | 0.820082 | 8.275338e-53 | -8.615850e-47 |
| Msa0414420 | Msa0899430 | 0.819003 | 1.458681e-52 | -8.615850e-47 |
| Msa0416650 | Msa0899430 | 0.823662 | 1.227851e-53 | -8.615850e-47 |
| Msa0417940 | Msa0899430 | 0.821165 | 4.667429e-53 | -8.615850e-47 |
| Msa0424320 | Msa0899430 | 0.874051 | 9.135619e-68 | -8.615850e-47 |
| Msa0424550 | Msa0899430 | 0.809233 | 2.094030e-50 | -8.615850e-47 |
| Msa0425790 | Msa0899430 | 0.807101 | 5.957212e-50 | -8.615850e-47 |
| Msa0434000 | Msa0899430 | 0.811631 | 6.355783e-51 | -8.615850e-47 |
| Msa0434200 | Msa0899430 | 0.812141 | 4.922301e-51 | -8.615850e-47 |
| Msa0435230 | Msa0899430 | 0.842874 | 1.980282e-58 | -8.615850e-47 |
| Msa0436780 | Msa0899430 | 0.801907 | 7.213918e-49 | -8.615850e-47 |
| Msa0444130 | Msa0899430 | 0.824885 | 6.334219e-54 | -8.615850e-47 |
| Msa0444750 | Msa0899430 | -0.813136 | 2.981838e-51 | -8.615850e-47 |
| Msa0445780 | Msa0899430 | 0.804449 | 2.148693e-49 | -8.615850e-47 |
| Msa0450000 | Msa0899430 | 0.855882 | 4.680762e-62 | -8.615850e-47 |
| Msa0452900 | Msa0899430 | 0.826224 | 3.050072e-54 | -8.615850e-47 |
| Msa0453580 | Msa0899430 | 0.828602 | 8.204928e-55 | -8.615850e-47 |
| Msa0466120 | Msa0899430 | 0.808415 | 3.131854e-50 | -8.615850e-47 |
| Msa0471380 | Msa0899430 | 0.834126 | 3.589692e-56 | -8.615850e-47 |
| Msa0475600 | Msa0899430 | 0.800042 | 1.735025e-48 | -8.615850e-47 |
| Msa0479340 | Msa0899430 | 0.874017 | 9.377115e-68 | -8.615850e-47 |
| Msa0251320 | Msa0899430 | 0.867932 | 9.503149e-66 | -8.615850e-47 |
| Msa0251640 | Msa0899430 | 0.864394 | 1.254802e-64 | -8.615850e-47 |
| Msa0257320 | Msa0899430 | 0.805316 | 1.415678e-49 | -8.615850e-47 |
| Msa0267000 | Msa0899430 | 0.823152 | 1.615550e-53 | -8.615850e-47 |
| Msa0267010 | Msa0899430 | 0.827329 | 1.661682e-54 | -8.615850e-47 |
| Msa0278110 | Msa0899430 | 0.828457 | 8.895385e-55 | -8.615850e-47 |
| Msa0278190 | Msa0899430 | 0.847202 | 1.342356e-59 | -8.615850e-47 |
| Msa0290870 | Msa0899430 | 0.812838 | 3.465902e-51 | -8.615850e-47 |
| Msa0295770 | Msa0899430 | 0.805292 | 1.432204e-49 | -8.615850e-47 |
| Msa0305190 | Msa0899430 | 0.834030 | 3.792734e-56 | -8.615850e-47 |
| Msa0307540 | Msa0899430 | 0.834561 | 2.791057e-56 | -8.615850e-47 |
| Msa0315200 | Msa0899430 | 0.804272 | 2.339011e-49 | -8.615850e-47 |
| Msa0317290 | Msa0899430 | 0.815674 | 8.189779e-52 | -8.615850e-47 |
| Msa0322360 | Msa0899430 | 0.869690 | 2.562247e-66 | -8.615850e-47 |
| Msa0342750 | Msa0899430 | 0.850584 | 1.544797e-60 | -8.615850e-47 |
| Msa0360510 | Msa0899430 | 0.804868 | 1.756935e-49 | -8.615850e-47 |
| Msa0490140 | Msa0899430 | 0.838506 | 2.762385e-57 | -8.615850e-47 |
| Msa0491590 | Msa0899430 | 0.812180 | 4.826414e-51 | -8.615850e-47 |
| Msa0493000 | Msa0899430 | 0.825195 | 5.351153e-54 | -8.615850e-47 |
| Msa0495330 | Msa0899430 | 0.803536 | 3.326166e-49 | -8.615850e-47 |
| Msa0501560 | Msa0899430 | 0.805792 | 1.124741e-49 | -8.615850e-47 |
| Msa0502340 | Msa0899430 | 0.836048 | 1.175676e-56 | -8.615850e-47 |
| Msa0503430 | Msa0899430 | 0.819915 | 9.038451e-53 | -8.615850e-47 |
| Msa0513060 | Msa0899430 | 0.819931 | 8.960500e-53 | -8.615850e-47 |
| Msa0514320 | Msa0899430 | 0.847728 | 9.624242e-60 | -8.615850e-47 |
| Msa0516750 | Msa0899430 | 0.815006 | 1.153269e-51 | -8.615850e-47 |
| Msa0523940 | Msa0899430 | 0.882528 | 9.658680e-71 | -8.615850e-47 |
| Msa0529040 | Msa0899430 | 0.815042 | 1.132080e-51 | -8.615850e-47 |
| Msa0534540 | Msa0899430 | 0.824344 | 8.490815e-54 | -8.615850e-47 |
| Msa0545700 | Msa0899430 | 0.869875 | 2.229706e-66 | -8.615850e-47 |
| Msa0556430 | Msa0899430 | 0.803926 | 2.761464e-49 | -8.615850e-47 |
| Msa0562440 | Msa0899430 | 0.801720 | 7.881260e-49 | -8.615850e-47 |
| Msa0564890 | Msa0899430 | 0.800767 | 1.234968e-48 | -8.615850e-47 |
| Msa0585230 | Msa0899430 | 0.829684 | 4.486168e-55 | -8.615850e-47 |
| Msa0594560 | Msa0899430 | 0.804188 | 2.435349e-49 | -8.615850e-47 |
| Msa0598780 | Msa0899430 | 0.814433 | 1.544583e-51 | -8.615850e-47 |
| Msa0598990 | Msa0899430 | 0.809579 | 1.764830e-50 | -8.615850e-47 |
| Msa0842650 | Msa0899430 | 0.808007 | 3.826983e-50 | -8.615850e-47 |
| Msa0844420 | Msa0899430 | 0.820044 | 8.441983e-53 | -8.615850e-47 |
| Msa0844450 | Msa0899430 | 0.803988 | 2.680760e-49 | -8.615850e-47 |
| Msa0844470 | Msa0899430 | 0.812593 | 3.921116e-51 | -8.615850e-47 |
| Msa0844490 | Msa0899430 | 0.880553 | 4.991722e-70 | -8.615850e-47 |
| Msa0846330 | Msa0899430 | 0.805751 | 1.147680e-49 | -8.615850e-47 |
| Msa0846350 | Msa0899430 | 0.806983 | 6.311237e-50 | -8.615850e-47 |
| Msa0848960 | Msa0899430 | 0.847150 | 1.387343e-59 | -8.615850e-47 |
| Msa0848990 | Msa0899430 | 0.857400 | 1.674563e-62 | -8.615850e-47 |
| Msa0849030 | Msa0899430 | 0.816501 | 5.352416e-52 | -8.615850e-47 |
| Msa0850880 | Msa0899430 | 0.810317 | 1.223891e-50 | -8.615850e-47 |
| Msa0853520 | Msa0899430 | 0.827751 | 1.315558e-54 | -8.615850e-47 |
| Msa0857640 | Msa0899430 | 0.806332 | 8.661755e-50 | -8.615850e-47 |
| Msa0858980 | Msa0899430 | 0.857145 | 1.991734e-62 | -8.615850e-47 |
| Msa0861130 | Msa0899430 | 0.837769 | 4.274460e-57 | -8.615850e-47 |
| Msa0864070 | Msa0899430 | 0.887706 | 1.127640e-72 | -8.615850e-47 |
| Msa0872230 | Msa0899430 | 0.816920 | 4.311579e-52 | -8.615850e-47 |
| Msa0877250 | Msa0899430 | 0.905316 | 4.881047e-80 | -8.615850e-47 |
| Msa0888130 | Msa0899430 | 0.846086 | 2.708970e-59 | -8.615850e-47 |
| Msa0888260 | Msa0899430 | 0.811635 | 6.343918e-51 | -8.615850e-47 |
| Msa0888370 | Msa0899430 | 0.853650 | 2.076564e-61 | -8.615850e-47 |
| Msa0888420 | Msa0899430 | 0.832950 | 7.053483e-56 | -8.615850e-47 |
| Msa0890310 | Msa0899430 | 0.821235 | 4.498124e-53 | -8.615850e-47 |
| Msa0892080 | Msa0899430 | 0.802757 | 4.821057e-49 | -8.615850e-47 |
| Msa0897330 | Msa0899430 | 0.822863 | 1.886255e-53 | -8.615850e-47 |
| Msa0899430 | Msa0899450 | 0.957275 | 4.020018e-115 | -8.615850e-47 |
| Msa0899430 | Msa0900910 | 0.816113 | 6.537643e-52 | -8.615850e-47 |
| Msa0899430 | Msa0901070 | 0.836825 | 7.456690e-57 | -8.615850e-47 |
| Msa0899430 | Msa0907260 | 0.845614 | 3.638876e-59 | -8.615850e-47 |
| Msa0899430 | Msa0907950 | 0.803237 | 3.836482e-49 | -8.615850e-47 |
| Msa0899430 | Msa0914270 | 0.822320 | 2.522889e-53 | -8.615850e-47 |
| Msa0899430 | Msa0914760 | 0.874963 | 4.477432e-68 | -8.615850e-47 |
| Msa0899430 | Msa0922150 | 0.805338 | 1.401078e-49 | -8.615850e-47 |
| Msa0899430 | Msa0924050 | 0.843954 | 1.019522e-58 | -8.615850e-47 |
| Msa0899430 | Msa0924060 | 0.805292 | 1.432555e-49 | -8.615850e-47 |
| Msa0899430 | Msa0925190 | 0.802740 | 4.860820e-49 | -8.615850e-47 |
| Msa0899430 | Msa0925250 | 0.802511 | 5.418873e-49 | -8.615850e-47 |
| Msa0899430 | Msa0925290 | 0.803587 | 3.245989e-49 | -8.615850e-47 |
| Msa0899430 | Msa0927380 | 0.919694 | 3.268667e-87 | -8.615850e-47 |
| Msa0899430 | Msa0927390 | 0.815019 | 1.145401e-51 | -8.615850e-47 |
| Msa0899430 | Msa0931520 | 0.800471 | 1.418799e-48 | -8.615850e-47 |
| Msa0899430 | Msa0935910 | 0.808955 | 2.401103e-50 | -8.615850e-47 |
| Msa0899430 | Msa0936300 | 0.828339 | 9.498669e-55 | -8.615850e-47 |
| Msa0899430 | Msa0939110 | 0.806079 | 9.789839e-50 | -8.615850e-47 |
| Msa0899430 | Msa0948320 | 0.819981 | 8.730210e-53 | -8.615850e-47 |
| Msa0899430 | Msa0952720 | 0.859601 | 3.694106e-63 | -8.615850e-47 |
| Msa0899430 | Msa0953120 | 0.849249 | 3.649897e-60 | -8.615850e-47 |
| Msa0899430 | Msa0954910 | 0.823453 | 1.373890e-53 | -8.615850e-47 |
| Msa0899430 | Msa0956270 | 0.841395 | 4.876970e-58 | -8.615850e-47 |
| Msa0899430 | Msa0958550 | 0.978638 | 3.020583e-146 | -8.615850e-47 |
| Msa0899430 | Msa0963070 | 0.801249 | 9.842517e-49 | -8.615850e-47 |
| Msa0899430 | Msa0964900 | 0.914064 | 2.971182e-84 | -8.615850e-47 |
| Msa0899430 | Msa0966750 | 0.851671 | 7.624476e-61 | -8.615850e-47 |
| Msa0899430 | Msa0967180 | 0.804324 | 2.281112e-49 | -8.615850e-47 |
| Msa0899430 | Msa0967280 | 0.852230 | 5.290870e-61 | -8.615850e-47 |
| Msa0899430 | Msa0967580 | 0.808880 | 2.491349e-50 | -8.615850e-47 |
| Msa0899430 | Msa0969520 | 0.800703 | 1.272713e-48 | -8.615850e-47 |
| Msa0899430 | Msa0973100 | 0.837933 | 3.879694e-57 | -8.615850e-47 |
| Msa0899430 | Msa0974080 | 0.861703 | 8.514449e-64 | -8.615850e-47 |
| Msa0899430 | Msa0974440 | 0.804802 | 1.813821e-49 | -8.615850e-47 |
| Msa0899430 | Msa0976670 | 0.830652 | 2.603641e-55 | -8.615850e-47 |
| Msa0899430 | Msa0980200 | 0.804147 | 2.483816e-49 | -8.615850e-47 |
| Msa0899430 | Msa0981270 | 0.815529 | 8.824358e-52 | -8.615850e-47 |
| Msa0899430 | Msa0985560 | 0.801603 | 8.327722e-49 | -8.615850e-47 |
| Msa0899430 | Msa0989060 | 0.821017 | 5.049086e-53 | -8.615850e-47 |
| Msa0899430 | Msa0989620 | 0.803695 | 3.083516e-49 | -8.615850e-47 |
| Msa0899430 | Msa0991820 | 0.804416 | 2.182928e-49 | -8.615850e-47 |
| Msa0899430 | Msa0991830 | 0.827041 | 1.947686e-54 | -8.615850e-47 |
| Msa0899430 | Msa0997370 | 0.820325 | 7.279762e-53 | -8.615850e-47 |
| Msa0899430 | Msa0997500 | 0.812184 | 4.815980e-51 | -8.615850e-47 |
| Msa0899430 | Msa0998690 | 0.830638 | 2.623132e-55 | -8.615850e-47 |
| Msa0899430 | Msa0999120 | 0.817894 | 2.601886e-52 | -8.615850e-47 |
| Msa0899430 | Msa0999220 | 0.862999 | 3.403596e-64 | -8.615850e-47 |
| Msa0899430 | Msa1000860 | 0.806083 | 9.769961e-50 | -8.615850e-47 |
| Msa0899430 | Msa1000880 | 0.822996 | 1.756187e-53 | -8.615850e-47 |
| Msa0899430 | Msa1000890 | 0.862731 | 4.116717e-64 | -8.615850e-47 |
| Msa0899430 | Msa1000900 | 0.857365 | 1.715618e-62 | -8.615850e-47 |
| Msa0899430 | Msa1002810 | 0.837950 | 3.840420e-57 | -8.615850e-47 |
| Msa0899430 | Msa1012590 | -0.802542 | 5.339525e-49 | -8.615850e-47 |
| Msa0899430 | Msa1014540 | 0.815262 | 1.011545e-51 | -8.615850e-47 |
| Msa0899430 | Msa1015490 | 0.839233 | 1.791034e-57 | -8.615850e-47 |
| Msa0899430 | Msa1016280 | 0.825493 | 4.549322e-54 | -8.615850e-47 |
| Msa0899430 | Msa1016320 | 0.805574 | 1.250024e-49 | -8.615850e-47 |
| Msa0899430 | Msa1023050 | 0.835673 | 1.463178e-56 | -8.615850e-47 |
| Msa0899430 | Msa1025360 | 0.834391 | 3.080331e-56 | -8.615850e-47 |
| Msa0899430 | Msa1025370 | 0.826228 | 3.043548e-54 | -8.615850e-47 |
| Msa0899430 | Msa1028230 | 0.842509 | 2.475445e-58 | -8.615850e-47 |
| Msa0899430 | Msa1029240 | 0.818438 | 1.960392e-52 | -8.615850e-47 |
| Msa0899430 | Msa1030970 | 0.808302 | 3.311167e-50 | -8.615850e-47 |
| Msa0899430 | Msa1044830 | 0.830278 | 3.212579e-55 | -8.615850e-47 |
| Msa0899430 | Msa1044840 | 0.835385 | 1.730508e-56 | -8.615850e-47 |
| Msa0899430 | Msa1050680 | 0.808190 | 3.498136e-50 | -8.615850e-47 |
| Msa0899430 | Msa1052330 | 0.814156 | 1.778490e-51 | -8.615850e-47 |
| Msa0899430 | Msa1060840 | 0.856214 | 3.743456e-62 | -8.615850e-47 |
| Msa0899430 | Msa1065570 | 0.813111 | 3.019429e-51 | -8.615850e-47 |
| Msa0899430 | Msa1068420 | 0.818733 | 1.680620e-52 | -8.615850e-47 |
| Msa0899430 | Msa1069220 | 0.847924 | 8.499942e-60 | -8.615850e-47 |
| Msa0899430 | Msa1075650 | 0.803805 | 2.925496e-49 | -8.615850e-47 |
| Msa0899430 | Msa1082580 | 0.815195 | 1.046901e-51 | -8.615850e-47 |
| Msa0899430 | Msa1085740 | 0.815280 | 1.002586e-51 | -8.615850e-47 |
| Msa0899430 | Msa1088530 | 0.805786 | 1.128142e-49 | -8.615850e-47 |
| Msa0899430 | Msa1098260 | 0.803283 | 3.752919e-49 | -8.615850e-47 |
| Msa0899430 | Msa1099970 | 0.800540 | 1.373887e-48 | -8.615850e-47 |
| Msa0899430 | Msa1099980 | 0.812011 | 5.254082e-51 | -8.615850e-47 |
| Msa0899430 | Msa1100980 | 0.801003 | 1.105128e-48 | -8.615850e-47 |
| Msa0899430 | Msa1109440 | 0.810620 | 1.053123e-50 | -8.615850e-47 |
| Msa0899430 | Msa1110090 | 0.819142 | 1.356256e-52 | -8.615850e-47 |
| Msa0899430 | Msa1112300 | 0.849423 | 3.263922e-60 | -8.615850e-47 |
| Msa0899430 | Msa1113170 | 0.819637 | 1.046278e-52 | -8.615850e-47 |
| Msa0899430 | Msa1115100 | 0.801494 | 8.768310e-49 | -8.615850e-47 |
| Msa0899430 | Msa1117150 | 0.812795 | 3.542612e-51 | -8.615850e-47 |
| Msa0899430 | Msa1120610 | 0.862767 | 4.012583e-64 | -8.615850e-47 |
| Msa0899430 | Msa1120740 | 0.806676 | 7.328853e-50 | -8.615850e-47 |
| Msa0899430 | Msa1121200 | 0.818246 | 2.166335e-52 | -8.615850e-47 |
| Msa0899430 | Msa1121480 | 0.868507 | 6.202357e-66 | -8.615850e-47 |
| Msa0899430 | Msa1121490 | 0.870412 | 1.487922e-66 | -8.615850e-47 |
| Msa0899430 | Msa1135220 | 0.824777 | 6.716821e-54 | -8.615850e-47 |
| Msa0899430 | Msa1136090 | 0.814647 | 1.385172e-51 | -8.615850e-47 |
| Msa0899430 | Msa1136420 | 0.801427 | 9.052045e-49 | -8.615850e-47 |
| Msa0899430 | Msa1137570 | 0.831482 | 1.628137e-55 | -8.615850e-47 |
| Msa0899430 | Msa1139680 | 0.830837 | 2.345150e-55 | -8.615850e-47 |
| Msa0899430 | Msa1144450 | 0.822303 | 2.545996e-53 | -8.615850e-47 |
| Msa0899430 | Msa1146120 | 0.803270 | 3.777132e-49 | -8.615850e-47 |
| Msa0899430 | Msa1149360 | 0.826052 | 3.352517e-54 | -8.615850e-47 |
| Msa0899430 | Msa1150370 | 0.812474 | 4.162563e-51 | -8.615850e-47 |
| Msa0899430 | Msa1156020 | 0.841896 | 3.598731e-58 | -8.615850e-47 |
| Msa0899430 | Msa1174910 | 0.818415 | 1.984089e-52 | -8.615850e-47 |
| Msa0899430 | Msa1177560 | 0.815403 | 9.411693e-52 | -8.615850e-47 |
| Msa0899430 | Msa1178180 | 0.802367 | 5.802250e-49 | -8.615850e-47 |
| Msa0899430 | Msa1182090 | 0.809887 | 1.515404e-50 | -8.615850e-47 |
| Msa0899430 | Msa1184420 | 0.838462 | 2.834304e-57 | -8.615850e-47 |
| Msa0899430 | Msa1185110 | 0.846436 | 2.175329e-59 | -8.615850e-47 |
| Msa0899430 | Msa1188990 | 0.801842 | 7.439075e-49 | -8.615850e-47 |
| Msa0899430 | Msa1195180 | 0.818464 | 1.933683e-52 | -8.615850e-47 |
| Msa0899430 | Msa1195190 | 0.809571 | 1.771871e-50 | -8.615850e-47 |
| Msa0899430 | Msa1205020 | 0.835250 | 1.872021e-56 | -8.615850e-47 |
| Msa0899430 | Msa1222620 | 0.807962 | 3.910875e-50 | -8.615850e-47 |
| Msa0899430 | Msa1227730 | 0.825810 | 3.825661e-54 | -8.615850e-47 |
| Msa0899430 | Msa1230430 | 0.824960 | 6.079760e-54 | -8.615850e-47 |
| Msa0899430 | Msa1248300 | 0.829750 | 4.322642e-55 | -8.615850e-47 |
| Msa0899430 | Msa1248310 | 0.869331 | 3.353865e-66 | -8.615850e-47 |
| Msa0899430 | Msa1248370 | 0.853626 | 2.110124e-61 | -8.615850e-47 |
| Msa0899430 | Msa1249490 | 0.805337 | 1.401449e-49 | -8.615850e-47 |
| Msa0899430 | Msa1256030 | 0.800435 | 1.443217e-48 | -8.615850e-47 |
| Msa0899430 | Msa1264930 | 0.802366 | 5.804476e-49 | -8.615850e-47 |
| Msa0899430 | Msa1268880 | 0.800425 | 1.449886e-48 | -8.615850e-47 |
| Msa0899430 | Msa1270230 | 0.814782 | 1.292780e-51 | -8.615850e-47 |
| Msa0899430 | Msa1270240 | 0.802439 | 5.608250e-49 | -8.615850e-47 |
| Msa0899430 | Msa1273230 | 0.808693 | 2.731786e-50 | -8.615850e-47 |
| Msa0899430 | Msa1276600 | 0.807657 | 4.540730e-50 | -8.615850e-47 |
| Msa0899430 | Msa1276890 | 0.839755 | 1.310509e-57 | -8.615850e-47 |
| Msa0899430 | Msa1277660 | 0.810956 | 8.905913e-51 | -8.615850e-47 |
| Msa0899430 | Msa1283330 | 0.812276 | 4.599002e-51 | -8.615850e-47 |
| Msa0899430 | Msa1284680 | 0.851566 | 8.166906e-61 | -8.615850e-47 |
| Msa0899430 | Msa1285540 | 0.804416 | 2.182850e-49 | -8.615850e-47 |
| Msa0899430 | Msa1285550 | 0.804608 | 1.990444e-49 | -8.615850e-47 |
| Msa0899430 | Msa1285930 | 0.813885 | 2.040254e-51 | -8.615850e-47 |
| Msa0899430 | Msa1286800 | 0.837047 | 6.544631e-57 | -8.615850e-47 |
| Msa0899430 | Msa1287190 | 0.829804 | 4.193517e-55 | -8.615850e-47 |
| Msa0899430 | Msa1287800 | 0.812995 | 3.202625e-51 | -8.615850e-47 |
| Msa0899430 | Msa1287810 | 0.824385 | 8.307670e-54 | -8.615850e-47 |
| Msa0899430 | Msa1288560 | 0.856151 | 3.904128e-62 | -8.615850e-47 |
| Msa0899430 | Msa1289420 | 0.816619 | 5.038150e-52 | -8.615850e-47 |
| Msa0899430 | Msa1289430 | 0.806955 | 6.397840e-50 | -8.615850e-47 |
| Msa0899430 | Msa1307890 | 0.810743 | 9.903234e-51 | -8.615850e-47 |
| Msa0899430 | Msa1312950 | 0.803838 | 2.879881e-49 | -8.615850e-47 |
| Msa0899430 | Msa1319800 | 0.801772 | 7.689685e-49 | -8.615850e-47 |
| Msa0899430 | Msa1320300 | 0.830884 | 2.283294e-55 | -8.615850e-47 |
| Msa0899430 | Msa1334250 | 0.809867 | 1.530545e-50 | -8.615850e-47 |
| Msa0899430 | Msa1340590 | 0.838418 | 2.910629e-57 | -8.615850e-47 |
| Msa0899430 | Msa1344520 | 0.847476 | 1.129090e-59 | -8.615850e-47 |
| Msa0899430 | Msa1366220 | 0.806557 | 7.762470e-50 | -8.615850e-47 |
| Msa0899430 | Msa1366810 | 0.872025 | 4.363657e-67 | -8.615850e-47 |
| Msa0899430 | Msa1366970 | 0.808265 | 3.372313e-50 | -8.615850e-47 |
| Msa0899430 | Msa1369430 | 0.812582 | 3.942427e-51 | -8.615850e-47 |
| Msa0899430 | Msa1378940 | 0.820673 | 6.058871e-53 | -8.615850e-47 |
| Msa0899430 | Msa1387280 | 0.812587 | 3.933592e-51 | -8.615850e-47 |
| Msa0899430 | Msa1387340 | 0.815539 | 8.778738e-52 | -8.615850e-47 |
| Msa0899430 | Msa1395900 | 0.800132 | 1.663131e-48 | -8.615850e-47 |
| Msa0899430 | Msa1397150 | 0.807881 | 4.069887e-50 | -8.615850e-47 |
| Msa0899430 | Msa1397580 | 0.845321 | 4.369006e-59 | -8.615850e-47 |
| Msa0899430 | Msa1400720 | 0.847888 | 8.693559e-60 | -8.615850e-47 |
| Msa0899430 | Msa1402790 | 0.854642 | 1.074334e-61 | -8.615850e-47 |
| Msa0899430 | Msa1403480 | 0.818608 | 1.793571e-52 | -8.615850e-47 |
| Msa0899430 | Msa1410680 | 0.832117 | 1.135200e-55 | -8.615850e-47 |
| Msa0899430 | Msa1420820 | 0.828781 | 7.426615e-55 | -8.615850e-47 |
| Msa0899430 | Msa1422180 | 0.830946 | 2.205504e-55 | -8.615850e-47 |
| Msa0899430 | Msa1433120 | 0.806093 | 9.722907e-50 | -8.615850e-47 |
| Msa0899430 | Msa1443060 | 0.820625 | 6.212874e-53 | -8.615850e-47 |
| Msa0899430 | Msa1444440 | 0.810719 | 1.002125e-50 | -8.615850e-47 |
| Msa0899430 | Msa1451570 | 0.805818 | 1.110906e-49 | -8.615850e-47 |
| Msa0899430 | Msa1451620 | -0.801682 | 8.024587e-49 | -8.615850e-47 |
| Msa0899430 | Msa1458750 | 0.812287 | 4.573610e-51 | -8.615850e-47 |
| Msa0899430 | Msa1466830 | 0.804272 | 2.338868e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0899430 | MtrunA17_Chr6g0485551 | 75.591 | 127 | 13 | 1 | 1 | 109 | 70 | 196 | 2.78e-14 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 18 sgRNAs with CRISPR-Local
Find 27 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGCCTTCGAAGTTCTTTA+CGG | 0.344809 | 6_1:-94509113 | None:intergenic |
| AAGTTGAAATTCTGGAAATA+AGG | 0.355807 | 6_1:+94509157 | Msa0899430:CDS |
| AGGCTGAAAACTGCGTGGTT+TGG | 0.421494 | 6_1:+94509057 | Msa0899430:CDS |
| GGAAGCTGAAAGGAAGGAAA+AGG | 0.444058 | 6_1:+94509221 | Msa0899430:CDS |
| AGAGGAGGAAGCTGAAAGGA+AGG | 0.454150 | 6_1:+94509215 | Msa0899430:CDS |
| CTCTAAACCAGCAGTTGTTT+AGG | 0.457152 | 6_1:+94509037 | None:intergenic |
| AGGAGGAAGCTGAAATGAAA+AGG | 0.473270 | 6_1:+94509187 | Msa0899430:CDS |
| GGAAGCTGAAATGAAAAGGA+AGG | 0.493440 | 6_1:+94509191 | Msa0899430:CDS |
| TCTGGAAATAAGGAAGGAAA+AGG | 0.493692 | 6_1:+94509167 | Msa0899430:CDS |
| AGCTGAAAGGAAGGAAAAGG+AGG | 0.497172 | 6_1:+94509224 | Msa0899430:CDS |
| AGGAAGAGGAGGAAGCTGAA+AGG | 0.516462 | 6_1:+94509211 | Msa0899430:CDS |
| TGAAATTCTGGAAATAAGGA+AGG | 0.531101 | 6_1:+94509161 | Msa0899430:CDS |
| TGAAATGAAAAGGAAGGAAG+AGG | 0.532757 | 6_1:+94509197 | Msa0899430:CDS |
| GGAAATAAGGAAGGAAAAGG+AGG | 0.550433 | 6_1:+94509170 | Msa0899430:CDS |
| AAAACTGCGTGGTTTGGCAA+AGG | 0.574300 | 6_1:+94509063 | Msa0899430:CDS |
| AATGAAAAGGAAGGAAGAGG+AGG | 0.596938 | 6_1:+94509200 | Msa0899430:CDS |
| AAAACCGTAAAGAACTTCGA+AGG | 0.658384 | 6_1:+94509109 | Msa0899430:CDS |
| TGTTTAGGCTGAAAACTGCG+TGG | 0.725223 | 6_1:+94509052 | Msa0899430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAAGCAAATTAAAAAAA+AGG | + | chr6_1:94509134-94509153 | Msa0899430:CDS | 15.0% |
| !! | GAAAAAGAAAATGAAAAAGA+AGG | + | chr6_1:94509296-94509315 | Msa0899430:CDS | 20.0% |
| ! | AAAAAAGGAAGTTGAAATTC+TGG | + | chr6_1:94509149-94509168 | Msa0899430:CDS | 25.0% |
| !! | AAGTTGAAATTCTGGAAATA+AGG | + | chr6_1:94509157-94509176 | Msa0899430:CDS | 25.0% |
| !! | TGAAATTCTGAAAAAAAGCA+AGG | + | chr6_1:94509251-94509270 | Msa0899430:CDS | 25.0% |
| ! | TGAAATTCTGGAAATAAGGA+AGG | + | chr6_1:94509161-94509180 | Msa0899430:CDS | 30.0% |
| GAAAAAAAGCAAGGAAAAGA+AGG | + | chr6_1:94509260-94509279 | Msa0899430:CDS | 30.0% | |
| CTAAAAAAGTTTGTGAGGAA+GGG | + | chr6_1:94509343-94509362 | Msa0899430:CDS | 30.0% | |
| TAAAAAAGTTTGTGAGGAAG+GGG | + | chr6_1:94509344-94509363 | Msa0899430:CDS | 30.0% | |
| ! | TCGAAGTTCTTTACGGTTTT+CGG | - | chr6_1:94509109-94509128 | None:intergenic | 35.0% |
| AAAACCGTAAAGAACTTCGA+AGG | + | chr6_1:94509109-94509128 | Msa0899430:CDS | 35.0% | |
| TCTGGAAATAAGGAAGGAAA+AGG | + | chr6_1:94509167-94509186 | Msa0899430:CDS | 35.0% | |
| TGAAATGAAAAGGAAGGAAG+AGG | + | chr6_1:94509197-94509216 | Msa0899430:CDS | 35.0% | |
| AGCAGCTAAAAAAGTTTGTG+AGG | + | chr6_1:94509338-94509357 | Msa0899430:CDS | 35.0% | |
| GCTAAAAAAGTTTGTGAGGA+AGG | + | chr6_1:94509342-94509361 | Msa0899430:CDS | 35.0% | |
| TCAGCCTTCGAAGTTCTTTA+CGG | - | chr6_1:94509116-94509135 | None:intergenic | 40.0% | |
| GGAAATAAGGAAGGAAAAGG+AGG | + | chr6_1:94509170-94509189 | Msa0899430:CDS | 40.0% | |
| AGGAGGAAGCTGAAATGAAA+AGG | + | chr6_1:94509187-94509206 | Msa0899430:CDS | 40.0% | |
| GGAAGCTGAAATGAAAAGGA+AGG | + | chr6_1:94509191-94509210 | Msa0899430:CDS | 40.0% | |
| AATGAAAAGGAAGGAAGAGG+AGG | + | chr6_1:94509200-94509219 | Msa0899430:CDS | 40.0% | |
| TGTTTAGGCTGAAAACTGCG+TGG | + | chr6_1:94509052-94509071 | Msa0899430:CDS | 45.0% | |
| ! | AAAACTGCGTGGTTTGGCAA+AGG | + | chr6_1:94509063-94509082 | Msa0899430:CDS | 45.0% |
| GGAAGCTGAAAGGAAGGAAA+AGG | + | chr6_1:94509221-94509240 | Msa0899430:CDS | 45.0% | |
| AGCTGAAAGGAAGGAAAAGG+AGG | + | chr6_1:94509224-94509243 | Msa0899430:CDS | 45.0% | |
| AGGCTGAAAACTGCGTGGTT+TGG | + | chr6_1:94509057-94509076 | Msa0899430:CDS | 50.0% | |
| AGGAAGAGGAGGAAGCTGAA+AGG | + | chr6_1:94509211-94509230 | Msa0899430:CDS | 50.0% | |
| AGAGGAGGAAGCTGAAAGGA+AGG | + | chr6_1:94509215-94509234 | Msa0899430:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 94509051 | 94509380 | 94509051 | ID=Msa0899430;Name=Msa0899430 |
| chr6_1 | mRNA | 94509051 | 94509380 | 94509051 | ID=Msa0899430-mRNA-1;Parent=Msa0899430;Name=Msa0899430-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|-1|0|1|-1|1|1|0|109 |
| chr6_1 | exon | 94509051 | 94509380 | 94509051 | ID=Msa0899430-mRNA-1:exon:16140;Parent=Msa0899430-mRNA-1 |
| chr6_1 | CDS | 94509051 | 94509380 | 94509051 | ID=Msa0899430-mRNA-1:cds;Parent=Msa0899430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
