AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1265320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1265320 MtrunA17_Chr4g0072561 98.192 553 10 0 1 553 1 553 0.0 1111
Msa1265320 MtrunA17_Chr4g0000461 66.298 543 175 5 10 548 4 542 0.0 730
Msa1265320 MtrunA17_Chr5g0395431 60.902 532 201 3 17 544 55 583 0.0 688
Msa1265320 MtrunA17_Chr2g0334131 70.213 282 82 2 269 548 3 284 1.19e-140 408
Msa1265320 MtrunA17_Chr4g0028411 41.431 531 303 5 17 543 11 537 1.52e-139 414
Msa1265320 MtrunA17_Chr2g0327341 40.909 528 301 6 17 540 11 531 6.11e-135 402
Msa1265320 MtrunA17_Chr3g0102411 38.148 540 320 6 12 546 9 539 8.42e-131 392
Msa1265320 MtrunA17_Chr1g0180551 42.804 542 281 13 18 540 82 613 5.17e-124 377
Msa1265320 MtrunA17_Chr1g0157401 38.649 533 312 6 17 540 26 552 2.26e-122 371
Msa1265320 MtrunA17_Chr1g0180541 40.720 528 298 9 25 542 20 542 6.28e-122 370
Msa1265320 MtrunA17_Chr1g0197391 38.993 536 302 9 26 549 45 567 1.10e-115 354
Msa1265320 MtrunA17_Chr5g0409771 37.106 539 325 10 8 540 17 547 7.62e-112 344
Msa1265320 MtrunA17_Chr4g0039791 39.425 487 283 9 68 548 81 561 2.98e-108 335
Msa1265320 MtrunA17_Chr8g0353341 37.500 512 295 7 17 511 23 526 1.57e-107 332
Msa1265320 MtrunA17_Chr5g0409791 37.849 502 280 11 68 548 78 568 3.28e-103 322
Msa1265320 MtrunA17_Chr3g0116271 36.811 508 289 9 45 540 63 550 2.34e-99 311
Msa1265320 MtrunA17_Chr3g0116251 35.842 505 295 8 45 540 64 548 7.43e-96 303
Msa1265320 MtrunA17_Chr1g0186071 36.842 513 305 8 35 544 56 552 4.19e-94 298
Msa1265320 MtrunA17_Chr2g0334121 58.621 203 80 3 10 208 5 207 1.49e-79 248
Msa1265320 MtrunA17_Chr6g0471921 31.084 489 313 14 59 538 32 505 2.35e-55 194
Msa1265320 MtrunA17_Chr5g0433241 28.868 530 322 18 44 537 27 537 7.57e-49 177
Msa1265320 MtrunA17_Chr1g0157431 30.211 331 218 5 17 338 26 352 5.83e-44 163
Msa1265320 MtrunA17_Chr3g0109731 26.230 549 348 14 35 543 18 549 2.33e-42 160
Msa1265320 MtrunA17_Chr5g0433231 28.759 532 327 17 44 540 27 541 6.96e-42 158
Msa1265320 MtrunA17_Chr5g0433221 27.458 539 325 19 44 540 27 541 1.12e-36 143
Msa1265320 MtrunA17_Chr2g0301671 27.239 536 342 16 46 546 35 557 1.97e-36 142
Msa1265320 MtrunA17_Chr5g0396311 26.966 534 343 18 30 534 11 526 4.21e-36 141
Msa1265320 MtrunA17_Chr5g0396331 25.141 533 340 18 44 543 27 533 2.59e-34 136
Msa1265320 MtrunA17_Chr4g0068151 26.443 537 343 17 47 546 36 557 8.99e-33 132
Msa1265320 MtrunA17_Chr6g0471311 26.812 552 322 23 44 540 19 543 2.09e-32 131
Msa1265320 MtrunA17_Chr4g0028451 53.271 107 41 1 406 512 10 107 9.17e-31 115
Msa1265320 MtrunA17_Chr2g0292471 25.709 564 338 21 37 540 7 549 1.19e-30 125
Msa1265320 MtrunA17_Chr7g0252691 24.046 524 348 15 58 540 205 719 3.08e-30 125
Msa1265320 MtrunA17_Chr8g0370701 23.892 519 348 15 46 535 71 571 1.43e-29 123
Msa1265320 MtrunA17_Chr5g0406681 22.301 565 392 16 1 535 9 556 9.50e-27 114
Msa1265320 MtrunA17_Chr1g0205711 24.477 478 283 17 51 465 106 568 7.08e-26 112
Msa1265320 MtrunA17_Chr7g0270221 26.888 543 297 21 50 527 66 573 3.28e-25 110
Msa1265320 MtrunA17_Chr8g0370731 25.522 431 277 13 132 537 73 484 1.60e-24 107
Msa1265320 MtrunA17_Chr1g0160041 25.310 565 327 17 57 546 106 650 8.90e-24 105
Msa1265320 MtrunA17_Chr4g0004101 25.926 324 201 10 246 540 10 323 1.49e-23 101
Msa1265320 MtrunA17_Chr1g0194371 24.685 555 304 22 50 512 66 598 2.61e-23 104
Msa1265320 MtrunA17_Chr4g0004841 28.014 282 164 10 285 540 64 332 4.95e-21 94.7
Msa1265320 MtrunA17_Chr3g0120731 23.457 486 283 16 57 464 135 609 1.50e-19 92.8
Msa1265320 MtrunA17_Chr5g0396691 23.810 546 305 25 18 475 27 549 7.13e-19 90.5
Msa1265320 MtrunA17_Chr1g0162621 23.780 492 278 20 59 475 79 548 9.38e-18 87.0
Msa1265320 MtrunA17_Chr4g0033141 25.653 421 256 18 173 546 661 1071 1.77e-17 86.7
Msa1265320 MtrunA17_Chr5g0396711 24.571 525 279 24 40 475 53 549 3.97e-17 84.7
Msa1265320 MtrunA17_Chr3g0121931 29.293 198 113 4 338 512 475 668 2.24e-16 82.8
Msa1265320 MtrunA17_Chr8g0377991 37.879 132 67 4 341 461 481 608 3.02e-16 82.0
Msa1265320 MtrunA17_Chr8g0351251 21.790 514 327 21 70 535 130 616 5.88e-16 81.6
Msa1265320 MtrunA17_Chr3g0121951 28.934 197 114 4 338 512 471 663 1.49e-15 80.1
Msa1265320 MtrunA17_Chr3g0124631 24.696 247 158 8 311 546 423 652 4.56e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1265320 AT3G21240.1 65.876 548 177 5 9 549 11 555 0.0 736
Msa1265320 AT1G51680.1 65.000 540 183 2 15 548 22 561 0.0 701
Msa1265320 AT3G21230.1 60.623 546 204 3 9 544 20 564 0.0 664
Msa1265320 AT1G65060.1 58.945 531 211 4 17 544 34 560 0.0 656
Msa1265320 AT1G51680.3 64.286 504 174 2 15 512 22 525 0.0 644
Msa1265320 AT3G21240.2 64.842 475 157 5 9 476 11 482 0.0 627
Msa1265320 AT3G21240.3 64.842 475 157 5 9 476 11 482 0.0 627
Msa1265320 AT3G21230.3 59.429 525 198 4 9 523 20 539 0.0 620
Msa1265320 AT1G51680.2 64.530 468 160 2 15 476 22 489 0.0 598
Msa1265320 AT3G21230.2 60.460 478 178 3 9 476 20 496 0.0 577
Msa1265320 AT1G65060.2 56.371 463 190 5 6 465 28 481 0.0 538
Msa1265320 AT3G21230.4 56.127 408 168 3 9 406 20 426 4.43e-153 446
Msa1265320 AT4G05160.1 42.018 545 284 8 17 544 11 540 8.60e-144 426
Msa1265320 AT1G20510.1 38.185 529 312 6 18 540 17 536 1.86e-118 361
Msa1265320 AT1G20480.1 38.879 535 308 7 17 541 33 558 6.54e-117 357
Msa1265320 AT1G62940.1 36.765 544 325 6 9 544 4 536 6.03e-113 347
Msa1265320 AT4G19010.1 34.935 541 340 7 6 540 20 554 1.04e-112 347
Msa1265320 AT5G63380.1 38.600 500 282 11 50 541 69 551 1.44e-107 333
Msa1265320 AT1G20500.1 35.196 537 327 7 13 540 18 542 5.37e-107 332
Msa1265320 AT5G38120.1 34.133 542 315 10 18 540 24 542 6.30e-98 308
Msa1265320 AT1G20510.2 37.045 467 277 7 18 477 17 473 5.52e-95 298
Msa1265320 AT5G38120.3 33.010 515 303 10 18 513 24 515 7.18e-87 278
Msa1265320 AT1G20510.3 35.056 445 272 7 18 455 17 451 7.33e-81 261
Msa1265320 AT5G38120.4 32.985 479 279 10 18 477 24 479 1.37e-77 253
Msa1265320 AT5G38120.2 32.985 479 279 10 18 477 24 479 1.37e-77 253
Msa1265320 AT1G20490.2 29.577 426 271 7 13 424 18 428 5.39e-59 203
Msa1265320 AT1G20490.1 29.577 426 271 7 13 424 18 428 5.39e-59 203
Msa1265320 AT3G48990.1 30.738 488 316 13 59 538 31 504 2.10e-52 187
Msa1265320 AT1G77240.1 29.032 527 322 17 42 535 25 532 8.92e-52 186
Msa1265320 AT1G21540.1 27.869 549 345 18 22 535 5 537 5.32e-49 178
Msa1265320 AT1G21530.2 27.713 516 312 17 60 535 42 536 1.16e-45 169
Msa1265320 AT5G16340.1 27.921 505 325 14 60 537 42 534 3.09e-45 168
Msa1265320 AT1G21530.1 27.821 514 312 17 60 535 42 534 8.92e-45 166
Msa1265320 AT1G66120.1 28.464 534 326 19 44 540 27 541 1.04e-42 161
Msa1265320 AT5G16370.1 26.772 508 327 14 60 537 42 534 2.43e-42 160
Msa1265320 AT1G75960.1 28.107 523 326 16 50 540 33 537 1.85e-40 154
Msa1265320 AT1G65890.1 27.339 545 342 20 44 549 27 556 1.01e-39 152
Msa1265320 AT1G65880.1 27.778 558 326 23 44 550 27 558 2.47e-39 152
Msa1265320 AT1G20560.1 27.079 517 325 15 58 537 34 535 7.52e-39 150
Msa1265320 AT3G16170.1 25.349 501 319 14 78 544 125 604 4.92e-37 145
Msa1265320 AT3G16910.1 26.716 539 340 17 47 546 38 560 7.54e-37 144
Msa1265320 AT1G76290.1 26.488 521 342 16 44 540 27 530 1.75e-34 137
Msa1265320 AT1G68270.1 24.771 545 326 20 44 549 27 526 6.31e-32 129
Msa1265320 AT1G20560.2 26.767 467 297 14 101 537 6 457 8.27e-32 129
Msa1265320 AT1G30520.2 26.386 523 316 19 68 540 42 545 1.46e-31 129
Msa1265320 AT1G30520.1 26.386 523 316 19 68 540 42 545 1.46e-31 129
Msa1265320 AT2G17650.1 24.365 591 374 24 2 546 36 599 1.97e-26 114
Msa1265320 AT3G05970.1 25.427 527 294 17 10 461 65 567 2.14e-26 114
Msa1265320 AT5G36880.2 22.605 522 358 12 58 540 197 711 1.20e-25 112
Msa1265320 AT5G27600.1 24.948 477 272 17 52 461 110 567 1.24e-25 112
Msa1265320 AT5G36880.6 22.605 522 358 12 58 540 147 661 1.37e-25 111
Msa1265320 AT5G36880.3 22.605 522 358 12 58 540 147 661 1.37e-25 111
Msa1265320 AT5G36880.5 22.605 522 358 12 58 540 147 661 1.37e-25 111
Msa1265320 AT5G36880.1 22.605 522 358 12 58 540 147 661 1.37e-25 111
Msa1265320 AT1G30520.3 25.641 429 264 14 68 460 42 451 1.14e-22 101
Msa1265320 AT1G30520.4 25.641 429 264 14 68 460 42 451 1.14e-22 101
Msa1265320 AT4G11030.1 24.593 492 263 19 52 461 71 536 2.27e-22 101
Msa1265320 AT4G23850.1 23.552 518 290 20 17 449 27 523 3.57e-22 101
Msa1265320 AT1G77590.1 24.187 492 288 17 57 475 105 584 7.61e-22 100
Msa1265320 AT2G47240.4 25.105 478 288 16 60 475 19 488 8.92e-20 93.6
Msa1265320 AT2G47240.1 25.105 478 288 16 60 475 78 547 1.03e-19 93.6
Msa1265320 AT2G47240.2 25.105 478 288 16 60 475 78 547 1.03e-19 93.6
Msa1265320 AT2G47240.3 25.105 478 288 16 60 475 78 547 1.03e-19 93.6
Msa1265320 AT2G04350.2 23.614 487 275 18 60 464 131 602 1.18e-19 93.6
Msa1265320 AT2G04350.1 23.614 487 275 18 60 464 131 602 1.18e-19 93.6
Msa1265320 AT1G49430.1 23.374 492 282 21 59 475 80 551 3.12e-19 92.0
Msa1265320 AT1G77590.2 24.722 449 253 17 100 475 2 438 3.18e-19 91.7
Msa1265320 AT5G36880.4 21.739 460 317 11 58 481 147 599 6.22e-19 90.9
Msa1265320 AT3G23790.1 42.391 92 49 1 341 432 479 566 4.80e-14 75.5
Msa1265320 AT4G14070.1 37.500 96 56 1 337 432 491 582 1.36e-12 70.9

Find 174 sgRNAs with CRISPR-Local

Find 407 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTTGACTTCTACAATTA+TGG 0.175665 8_2:+69538883 None:intergenic
ACTTAATGTTTCAAGCTTAT+AGG 0.224324 8_2:+69539317 None:intergenic
ATTTCACCAGCTTTGTTTCT+TGG 0.226424 8_2:+69542959 None:intergenic
TGGATCTGGTGGAGCTAATT+TGG 0.253192 8_2:+69545487 None:intergenic
TGTTGAATTGAGAAAGGTTT+TGG 0.256297 8_2:+69545295 None:intergenic
ATTTGAGATAACTAAGGTTT+TGG 0.266861 8_2:-69544602 Msa1265320:CDS
GGAACTTATTGAAAAGTATA+AGG 0.267484 8_2:-69544581 Msa1265320:CDS
GATATCTCTTCTTACCTTAC+TGG 0.273657 8_2:+69538937 None:intergenic
CTGATTTGATGTCTTCCTTT+AGG 0.274226 8_2:+69539010 None:intergenic
AAACAAAGATCAAGTTTAAA+AGG 0.280322 8_2:-69539092 Msa1265320:three_prime_UTR
TTGTTGCCTCCGGGTCATTT+AGG 0.297187 8_2:+69540648 None:intergenic
TGTGTTGGAATTTCAATATC+AGG 0.302738 8_2:+69545342 None:intergenic
GCTGGTGAAATTTGTATTAG+AGG 0.314435 8_2:-69542947 Msa1265320:CDS
TTACTATGTGGTATTCGTTC+TGG 0.314962 8_2:-69544649 Msa1265320:CDS
TCTGTTAGTCACATCGGATT+TGG 0.317783 8_2:-69539441 Msa1265320:three_prime_UTR
GGATATATGCTACAGGGATA+TGG 0.338027 8_2:-69543118 Msa1265320:intron
TGTGTTAACATAACACCTTT+AGG 0.340407 8_2:+69544796 None:intergenic
TTTACCAATGCTAAAACAAT+TGG 0.354078 8_2:+69544535 None:intergenic
GTTCCAGTTGCATTTGTTGT+AGG 0.359795 8_2:-69540233 Msa1265320:CDS
GGTGGACGTCGGAGTAGGTT+AGG 0.360550 8_2:+69545235 None:intergenic
ATAGTTCTCTTTGTTGCCTC+CGG 0.363221 8_2:+69540638 None:intergenic
CAGTTCCGATGAGGTGTAGA+AGG 0.365975 8_2:+69545065 None:intergenic
AAACATTACATGGGTTTACT+TGG 0.367160 8_2:-69539414 Msa1265320:three_prime_UTR
TTAGCTAAGTTTGGTGGATC+TGG 0.379875 8_2:+69545473 None:intergenic
AAATGTGTTTGGTGGTAGTT+TGG 0.382197 8_2:+69545528 None:intergenic
CGATGTGACTAACAGATCTA+AGG 0.390166 8_2:+69539448 None:intergenic
GGTAACGCAACTACGTCGTT+TGG 0.393743 8_2:+69544844 None:intergenic
TCTATTAGAGTGATGATAAC+TGG 0.408293 8_2:-69544481 Msa1265320:CDS
CAAGATTACCTTTCAAATGC+AGG 0.411187 8_2:+69538855 None:intergenic
TCATGATGACATCACCTTGT+TGG 0.412338 8_2:+69545169 None:intergenic
GCACCAGGCTTTGTCTTGAA+TGG 0.415126 8_2:+69543046 None:intergenic
AATCCTGCGACTCAATATAT+AGG 0.415795 8_2:-69539578 Msa1265320:three_prime_UTR
GATCCTACAACAAATGCAAC+TGG 0.421426 8_2:+69540230 None:intergenic
GGAACTTGAACAAGCTGTTA+AGG 0.429990 8_2:-69544440 Msa1265320:CDS
AAAATAGTGGACACAGAAAC+TGG 0.432799 8_2:-69542992 Msa1265320:CDS
CAATTTGCACTCACCTTCCT+CGG 0.434193 8_2:-69545126 Msa1265320:CDS
GTAACGCAACTACGTCGTTT+GGG 0.435729 8_2:+69544845 None:intergenic
CTTCTACACCTCATCGGAAC+TGG 0.437378 8_2:-69545064 Msa1265320:CDS
GGAACTTCTGGTTTACCTAA+AGG 0.438411 8_2:-69544811 Msa1265320:CDS
AACAATGCTTCGAGCTCAGC+AGG 0.444462 8_2:+69540500 None:intergenic
ATTTGGCTTCAAACATTACA+TGG 0.445317 8_2:-69539424 Msa1265320:three_prime_UTR
CTTACTGGAACTCCTTATCA+TGG 0.447295 8_2:+69538952 None:intergenic
TAGTTCTCTTTGTTGCCTCC+GGG 0.451441 8_2:+69540639 None:intergenic
ATTTATATCCCCTAACAAGC+AGG 0.451728 8_2:+69539543 None:intergenic
CATCCTCGTAGTTTGTGTAT+TGG 0.452212 8_2:+69544722 None:intergenic
ACCAATGCTAAAACAATTGG+TGG 0.453202 8_2:+69544538 None:intergenic
TAGTTATTTGCATTGACCTT+TGG 0.454213 8_2:+69539136 None:intergenic
TCAGACGTGTGTGAATAATA+TGG 0.455177 8_2:-69545624 Msa1265320:five_prime_UTR
CGAGCTCAGCAGGAGCTACT+TGG 0.455494 8_2:+69540510 None:intergenic
TGTTCTTGTTGTGGAGGAGA+TGG 0.455920 8_2:+69545396 None:intergenic
GATATATGCTACAGGGATAT+GGG 0.457924 8_2:-69543117 Msa1265320:intron
CACCAGCTTTGTTTCTTGGA+AGG 0.461904 8_2:+69542963 None:intergenic
GTGGACGTCGGAGTAGGTTA+GGG 0.462328 8_2:+69545236 None:intergenic
TTTGATTTAGCTAAGTTTGG+TGG 0.467982 8_2:+69545467 None:intergenic
TGCAAGACTTAACGAAGGTC+TGG 0.471141 8_2:-69539848 Msa1265320:CDS
CATTACATGGGTTTACTTGG+AGG 0.474118 8_2:-69539411 Msa1265320:three_prime_UTR
AGGACCACTTTCAATTAGCT+TGG 0.474310 8_2:-69543083 Msa1265320:CDS
TGGTAACATCAGTAGTTGTT+GGG 0.474435 8_2:+69545591 None:intergenic
GCCACGAACTGTACTTGGAC+AGG 0.475082 8_2:-69544410 Msa1265320:intron
ATGGTAACATCAGTAGTTGT+TGG 0.475192 8_2:+69545590 None:intergenic
TGGAAACAGTATGAGTGTAA+TGG 0.478337 8_2:+69545315 None:intergenic
GACGGTTGTTGAATTGAGAA+AGG 0.479714 8_2:+69545289 None:intergenic
GCATTTGTTGTAGGATCAAA+CGG 0.480693 8_2:-69540224 Msa1265320:CDS
AAAGGGTCACAAACTTTGTC+AGG 0.482409 8_2:-69538987 Msa1265320:three_prime_UTR
TGTCACACCGACTTAATTCG+TGG 0.484926 8_2:+69539819 None:intergenic
TTGTCTGAAGATTCGATGAC+TGG 0.485504 8_2:-69539197 Msa1265320:three_prime_UTR
GCTAAGTTTGGTGGATCTGG+TGG 0.487022 8_2:+69545476 None:intergenic
GCCGCCGGTCTAAACACTCT+TGG 0.487351 8_2:-69545195 Msa1265320:CDS
TGTACAAGTTTCCCATGATA+AGG 0.490766 8_2:-69538964 Msa1265320:three_prime_UTR
TTGTTCAAGTTCCATTCCCA+TGG 0.491121 8_2:+69544450 None:intergenic
AGATTGAAAGATGAAGATGC+TGG 0.493365 8_2:-69540260 Msa1265320:CDS
ATGAATACCTTTCATAACCT+TGG 0.495694 8_2:+69542922 None:intergenic
CAAGCAATACATATCACAAC+AGG 0.497758 8_2:-69540177 Msa1265320:intron
GATAACTGGTGCTGCTCCCA+TGG 0.499661 8_2:-69544467 Msa1265320:CDS
ACCTGTCCAAGTACAGTTCG+TGG 0.500239 8_2:+69544409 None:intergenic
ACCAGCTTTGTTTCTTGGAA+GGG 0.507882 8_2:+69542964 None:intergenic
AGGTTGCCACGAACTGTACT+TGG 0.509307 8_2:-69544415 Msa1265320:CDS
CATAATTGTAGAAGTCAAAG+AGG 0.511451 8_2:-69538882 Msa1265320:three_prime_UTR
TGGTGCTGCTCCCATGGGAA+TGG 0.513144 8_2:-69544461 Msa1265320:CDS
ACATCAGTAGTTGTTGGGAC+AGG 0.513453 8_2:+69545596 None:intergenic
GGAAGACATCAAATCAGAAA+GGG 0.519827 8_2:-69539004 Msa1265320:three_prime_UTR
AAACGCTGAGATGAAAATAG+TGG 0.520930 8_2:-69543005 Msa1265320:CDS
GCGGAAGGAGGCACCGAGGA+AGG 0.521219 8_2:+69545113 None:intergenic
GAGTGTAATGGAAGGTGTGT+TGG 0.523918 8_2:+69545327 None:intergenic
CCAGAAGTTCCTGAAGAAAA+CGG 0.526342 8_2:+69544823 None:intergenic
GAACCATTCAAGACAAAGCC+TGG 0.529977 8_2:-69543049 Msa1265320:CDS
ATGTATGTATGAAATGTGTT+TGG 0.530546 8_2:+69545517 None:intergenic
AATTAGCTTGGCATTTGCAA+AGG 0.531695 8_2:-69543071 Msa1265320:CDS
CATGATAAGGAGTTCCAGTA+AGG 0.534047 8_2:-69538951 Msa1265320:three_prime_UTR
CCTTTAGGCAACATTTCGAA+TGG 0.535370 8_2:+69539025 None:intergenic
TTGAACAAGCTGTTAAGGAT+AGG 0.537257 8_2:-69544435 Msa1265320:CDS
AGGAAGACATCAAATCAGAA+AGG 0.537361 8_2:-69539005 Msa1265320:three_prime_UTR
AGAATTTGCACCCACAGAAA+CGG 0.539220 8_2:+69539685 None:intergenic
ACTATTCCTAAAGCCGCCTC+AGG 0.540261 8_2:-69539895 Msa1265320:CDS
AGGCCTATATATTGAGTCGC+AGG 0.541173 8_2:+69539575 None:intergenic
TCCCTTCCAAGAAACAAAGC+TGG 0.544071 8_2:-69542965 Msa1265320:CDS
GAACTATAGACAAAGAAGAA+TGG 0.544086 8_2:-69540622 Msa1265320:CDS
GGAGTAGGTTAGGGTTTCTC+CGG 0.544325 8_2:+69545245 None:intergenic
ACAATATCACAGTTAGTTGA+CGG 0.544955 8_2:-69544757 Msa1265320:CDS
ACAGCAGCATCAGAAATGTT+CGG 0.547060 8_2:+69540467 None:intergenic
TCGTAGTTTGTGTATTGGTG+TGG 0.549665 8_2:+69544727 None:intergenic
ACGACTGTGCCACATGCACC+AGG 0.550955 8_2:+69543031 None:intergenic
TGGCTACACACAGGTGACAT+TGG 0.551130 8_2:-69540602 Msa1265320:CDS
GTGCAAATTGAGGAGAGTTA+CGG 0.552408 8_2:+69545139 None:intergenic
AAAGAATTGATTAAATACAA+AGG 0.557111 8_2:-69540536 Msa1265320:CDS
AAACGACGGAAAGCAAATCC+AGG 0.559565 8_2:+69539237 None:intergenic
AGGAAGGTGAGTGCAAATTG+AGG 0.559768 8_2:+69545129 None:intergenic
TTTATATCCCCTAACAAGCA+GGG 0.561403 8_2:+69539544 None:intergenic
GTGTTGGAATTTCAATATCA+GGG 0.565424 8_2:+69545343 None:intergenic
ATGTGCAATATCCGTTTCTG+TGG 0.565794 8_2:-69539696 Msa1265320:three_prime_UTR
CATCGAATCTTCAGACAAAG+AGG 0.567465 8_2:+69539202 None:intergenic
GGAGGAAGATGAACGTGTTG+TGG 0.569868 8_2:-69544923 Msa1265320:CDS
CCATTCGAAATGTTGCCTAA+AGG 0.571623 8_2:-69539025 Msa1265320:three_prime_UTR
AATGCCAAGCTAATTGAAAG+TGG 0.574861 8_2:+69543079 None:intergenic
AGTGCATAGATATGAAACAT+AGG 0.575430 8_2:+69544682 None:intergenic
CAATATCAGGGAGCTTAGAA+CGG 0.576024 8_2:+69545355 None:intergenic
ACAACACGTTCATCTTCCTC+CGG 0.578234 8_2:+69544925 None:intergenic
TGAGGTGTAGAAGGGATTTG+CGG 0.578595 8_2:+69545074 None:intergenic
TGAAAGAGTGTCATATAAGT+CGG 0.578676 8_2:-69538826 Msa1265320:three_prime_UTR
GAGGGCAACCTGCATTTGAA+AGG 0.579781 8_2:-69538863 Msa1265320:three_prime_UTR
TGTTCAAGTTCCATTCCCAT+GGG 0.583375 8_2:+69544451 None:intergenic
ACCGTCCGCAAAATCGCCGC+CGG 0.583860 8_2:-69545210 Msa1265320:CDS
GATAACCGCGCCGCGGAAGG+AGG 0.585502 8_2:+69545101 None:intergenic
AAGACAAAGCCTGGTGCATG+TGG 0.587138 8_2:-69543040 Msa1265320:CDS
GGTGAGGTGGACGTCGGAGT+AGG 0.587685 8_2:+69545230 None:intergenic
TATGTATGAAATGTGTTTGG+TGG 0.587774 8_2:+69545520 None:intergenic
GGATATGGGATGACAGAGGC+AGG 0.587842 8_2:-69543103 Msa1265320:CDS
GATTCCAAGAGTGTTTAGAC+CGG 0.589374 8_2:+69545191 None:intergenic
CATCAGTAGTTGTTGGGACA+GGG 0.590035 8_2:+69545597 None:intergenic
CTTAGATCTGTTAGTCACAT+CGG 0.590730 8_2:-69539447 Msa1265320:three_prime_UTR
TGTGTGCATTGATTCATCAC+CGG 0.593728 8_2:-69544944 Msa1265320:CDS
TACGACAGAAGAGTGCGACC+TGG 0.594346 8_2:-69539255 Msa1265320:three_prime_UTR
ATAACTGGTGCTGCTCCCAT+GGG 0.598182 8_2:-69544466 Msa1265320:CDS
TGTCTCATCAACGGCAACAC+CGG 0.598284 8_2:-69545264 Msa1265320:CDS
TCCAAGAGTGTTTAGACCGG+CGG 0.600632 8_2:+69545194 None:intergenic
AAAATGCAGTTGCATATGCA+TGG 0.602236 8_2:-69539765 Msa1265320:three_prime_UTR
TTACTGGAACTCCTTATCAT+GGG 0.605638 8_2:+69538953 None:intergenic
GCATCGAGGATAAACAAGAA+TGG 0.605816 8_2:-69539068 Msa1265320:three_prime_UTR
AACACTCTTGGAATCCAACA+AGG 0.607086 8_2:-69545183 Msa1265320:CDS
AGAGGCACCAAGGTTATGAA+AGG 0.607601 8_2:-69542929 Msa1265320:intron
TGAAGATTCGATGACTGGCA+AGG 0.610341 8_2:-69539192 Msa1265320:three_prime_UTR
AACCGTCCATGTCTCATCAA+CGG 0.611209 8_2:-69545273 Msa1265320:CDS
AAATCCCTTCTACACCTCAT+CGG 0.618454 8_2:-69545070 Msa1265320:CDS
GGAAGAACAAAAGAAAACGA+CGG 0.619906 8_2:+69539223 None:intergenic
TTGTTTAGCCAGTTCCGATG+AGG 0.620036 8_2:+69545056 None:intergenic
TTCCTCGGTGCCTCCTTCCG+CGG 0.621675 8_2:-69545111 Msa1265320:CDS
TGTTGTGGAGGAGATGGAGA+TGG 0.624273 8_2:+69545402 None:intergenic
AGTTCCGATGAGGTGTAGAA+GGG 0.629957 8_2:+69545066 None:intergenic
TTTGGCTTCAAACATTACAT+GGG 0.633593 8_2:-69539423 Msa1265320:three_prime_UTR
GTGCATTGATTCATCACCGG+AGG 0.634881 8_2:-69544941 Msa1265320:CDS
ATCAGGATACCTAAATGACC+CGG 0.634966 8_2:-69540657 Msa1265320:intron
ATAATTGTAGAAGTCAAAGA+GGG 0.636885 8_2:-69538881 Msa1265320:three_prime_UTR
TTATATCCCCTAACAAGCAG+GGG 0.640457 8_2:+69539545 None:intergenic
TGTGCAATATCCGTTTCTGT+GGG 0.641456 8_2:-69539695 Msa1265320:three_prime_UTR
GTCGCACTCTTCTGTCGTAG+AGG 0.643672 8_2:+69539259 None:intergenic
GCGGACGGTGAGGTGGACGT+CGG 0.646515 8_2:+69545224 None:intergenic
TATTGAAAAGTATAAGGTGA+CGG 0.646708 8_2:-69544575 Msa1265320:CDS
GTAGTTGCCACGAATTAAGT+CGG 0.648022 8_2:-69539826 Msa1265320:exon
GTGTTGCCGTTGATGAGACA+TGG 0.649558 8_2:+69545267 None:intergenic
CGCCGCGGAAGGAGGCACCG+AGG 0.655697 8_2:+69545109 None:intergenic
AATTTGTATTAGAGGCACCA+AGG 0.664823 8_2:-69542939 Msa1265320:CDS
CGGTGGTGATAACCGCGCCG+CGG 0.680948 8_2:+69545094 None:intergenic
AACAGTATGAGTGTAATGGA+AGG 0.696571 8_2:+69545319 None:intergenic
GGTGTAGAAGGGATTTGCGG+TGG 0.703235 8_2:+69545077 None:intergenic
CAAATTGAGGAGAGTTACGG+AGG 0.706119 8_2:+69545142 None:intergenic
TATATCCCCTAACAAGCAGG+GGG 0.706502 8_2:+69539546 None:intergenic
AAAGAAGAATGGCTACACAC+AGG 0.708858 8_2:-69540611 Msa1265320:CDS
TGCCGTTGATGAGACATGGA+CGG 0.709697 8_2:+69545271 None:intergenic
TTAACTGCAAGACTTAACGA+AGG 0.717559 8_2:-69539853 Msa1265320:CDS
CAAGTTTAAAAGGAGCATCG+AGG 0.726236 8_2:-69539082 Msa1265320:three_prime_UTR
ACAGGGATATGGGATGACAG+AGG 0.730581 8_2:-69543107 Msa1265320:intron
AGGATACCTAAATGACCCGG+AGG 0.746839 8_2:-69540654 Msa1265320:CDS
AAACGGTTCAAAGATCAGTG+AGG 0.749103 8_2:-69540207 Msa1265320:CDS
ACACCAATACACAAACTACG+AGG 0.785558 8_2:-69544725 Msa1265320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTGAAATTCA+AGG + chr8_2:69538856-69538875 None:intergenic 10.0%
!! AAATGTTATAAATGAAAATA+TGG + chr8_2:69540041-69540060 None:intergenic 10.0%
!! GATCATTTATTATTAAATAT+TGG + chr8_2:69540908-69540927 None:intergenic 10.0%
!! TATTACAAATAATATAAATG+GGG - chr8_2:69541203-69541222 Msa1265320:intron 10.0%
!!! ATTTAAAGTGTTTTATAATT+AGG - chr8_2:69542318-69542337 Msa1265320:intron 10.0%
!!! TCTTTTAAAATAAATAAGTT+GGG + chr8_2:69542537-69542556 None:intergenic 10.0%
!!! ATCTTTTAAAATAAATAAGT+TGG + chr8_2:69542538-69542557 None:intergenic 10.0%
!!! TATTTTGATTTGAATAAAAT+TGG - chr8_2:69543197-69543216 Msa1265320:intron 10.0%
!! TATTTAGTTATTGTATAAAA+AGG - chr8_2:69543303-69543322 Msa1265320:intron 10.0%
!! CTTATTTAGATAAAAAAAAA+AGG - chr8_2:69543377-69543396 Msa1265320:intron 10.0%
!! TATTAAAAACAAAACTTAAG+TGG + chr8_2:69540528-69540547 None:intergenic 15.0%
!! GACTTATAAAAAAAAATGAT+TGG - chr8_2:69540622-69540641 Msa1265320:CDS 15.0%
!! AAAAATACTTAATGTATAGA+AGG - chr8_2:69541252-69541271 Msa1265320:intron 15.0%
!!! TAGATAAAGATATTTTTGTA+AGG - chr8_2:69542274-69542293 Msa1265320:intron 15.0%
!! ATTAACATATGTAAAAGAAT+GGG - chr8_2:69542661-69542680 Msa1265320:intron 15.0%
!! CATAACAATACTAAATAAAA+CGG + chr8_2:69542795-69542814 None:intergenic 15.0%
!! TCGTATTAAAATATAGAAAA+CGG + chr8_2:69542856-69542875 None:intergenic 15.0%
!!! TGAAATTCTTTTATTATAAG+AGG + chr8_2:69542890-69542909 None:intergenic 15.0%
!! AAATCAAAATAAGTTATCAA+AGG + chr8_2:69543188-69543207 None:intergenic 15.0%
!!! TATATAGTATTTTAAGGTTT+AGG - chr8_2:69543238-69543257 Msa1265320:intron 15.0%
!!! TTTCTTTTTTTTATTTGACA+AGG + chr8_2:69543337-69543356 None:intergenic 15.0%
!! TGTCAAATAAAAAAAAGAAA+AGG - chr8_2:69543337-69543356 Msa1265320:intron 15.0%
!!! TAACAGTTATACATTTTAAT+TGG - chr8_2:69543622-69543641 Msa1265320:intron 15.0%
!! AAAGAATTGATTAAATACAA+AGG - chr8_2:69543882-69543901 Msa1265320:intron 15.0%
!! AGAAAATTAATCTACTAATT+TGG + chr8_2:69544283-69544302 None:intergenic 15.0%
!!! TAGATTAATTTTCTTGTTAT+GGG - chr8_2:69544289-69544308 Msa1265320:intron 15.0%
!!! TTTTTTGAAATTCAAGGTTA+TGG + chr8_2:69538850-69538869 None:intergenic 20.0%
!!! TATTTTGATTTAGCTAAGTT+TGG + chr8_2:69538957-69538976 None:intergenic 20.0%
!!! TGAAAAATTTGAGATAACTA+AGG - chr8_2:69539810-69539829 Msa1265320:three_prime_UTR 20.0%
!! AGAATAATAATCATTGTGAT+AGG + chr8_2:69540262-69540281 None:intergenic 20.0%
!!! AAAACTTAAGTTGTTATCAT+AGG + chr8_2:69540381-69540400 None:intergenic 20.0%
!!! AAAACTTAAGTTGTTATCAT+AGG + chr8_2:69540381-69540400 None:intergenic 20.0%
!!! TTAATTTGTATGCACTTTTT+AGG + chr8_2:69540670-69540689 None:intergenic 20.0%
!!! GTACACTAATAAATTTTGAA+AGG + chr8_2:69540990-69541009 None:intergenic 20.0%
!! GTAATAATCATAATAACAAG+TGG + chr8_2:69541112-69541131 None:intergenic 20.0%
!!! AAATATTTTGATCGATGATA+TGG - chr8_2:69541851-69541870 Msa1265320:intron 20.0%
!! ATTTATCCATATAACTTCAT+CGG - chr8_2:69542031-69542050 Msa1265320:intron 20.0%
!!! AGTGTTTTATAATTAGGAAT+TGG - chr8_2:69542324-69542343 Msa1265320:intron 20.0%
!!! TTTTATAATTAGGAATTGGA+GGG - chr8_2:69542328-69542347 Msa1265320:intron 20.0%
!! GATTAACATATGTAAAAGAA+TGG - chr8_2:69542660-69542679 Msa1265320:intron 20.0%
!! TATTAAAATATAGAAAACGG+TGG + chr8_2:69542853-69542872 None:intergenic 20.0%
!! ATAAAAGAATTTCATGCAAA+TGG - chr8_2:69542896-69542915 Msa1265320:intron 20.0%
!! ATTAAAGTATGCACAAATAA+GGG + chr8_2:69543026-69543045 None:intergenic 20.0%
!! AATTAAAGTATGCACAAATA+AGG + chr8_2:69543027-69543046 None:intergenic 20.0%
!!! GTGTTGTATATAGTATTTTA+AGG - chr8_2:69543232-69543251 Msa1265320:intron 20.0%
!! TTTATCTAAATAAGAACCTA+TGG + chr8_2:69543371-69543390 None:intergenic 20.0%
!!! TTTTTATGAAAACACTGATA+TGG + chr8_2:69543497-69543516 None:intergenic 20.0%
!! TGCTTATTGAATACTATAAT+TGG + chr8_2:69543672-69543691 None:intergenic 20.0%
!! ACGACTAATTATAATGATAA+TGG - chr8_2:69544124-69544143 Msa1265320:intron 20.0%
!!! AATTATAATGATAATGGTGT+TGG - chr8_2:69544130-69544149 Msa1265320:intron 20.0%
!!! GTAGATTAATTTTCTTGTTA+TGG - chr8_2:69544288-69544307 Msa1265320:intron 20.0%
!!! GAGTAAAAGAATTTTTCTAT+AGG - chr8_2:69544915-69544934 Msa1265320:CDS 20.0%
!!! AGAATTTTTCTATAGGAAAA+TGG - chr8_2:69544922-69544941 Msa1265320:CDS 20.0%
!! AAACAAAGATCAAGTTTAAA+AGG - chr8_2:69545326-69545345 Msa1265320:CDS 20.0%
! ATGTATGTATGAAATGTGTT+TGG + chr8_2:69538904-69538923 None:intergenic 25.0%
!!! ATTTTGATATTAGGAGAATG+AGG + chr8_2:69538992-69539011 None:intergenic 25.0%
!!! GATGGTAACATTTTGATATT+AGG + chr8_2:69539001-69539020 None:intergenic 25.0%
!!! TTTGGGTTTATTTTAACTTC+TGG + chr8_2:69539559-69539578 None:intergenic 25.0%
!! CTAAATTCGATTTTACTATG+TGG - chr8_2:69539757-69539776 Msa1265320:three_prime_UTR 25.0%
!!! ATTTGAGATAACTAAGGTTT+TGG - chr8_2:69539816-69539835 Msa1265320:exon 25.0%
!! GGAACTTATTGAAAAGTATA+AGG - chr8_2:69539837-69539856 Msa1265320:CDS 25.0%
!! TATTGAAAAGTATAAGGTGA+CGG - chr8_2:69539843-69539862 Msa1265320:CDS 25.0%
! TTTACCAATGCTAAAACAAT+TGG + chr8_2:69539886-69539905 None:intergenic 25.0%
!!! TTTTAGCATTGGTAAAAAGT+GGG - chr8_2:69539890-69539909 Msa1265320:CDS 25.0%
! AAAATATTTGTGACTAGGAA+AGG + chr8_2:69540082-69540101 None:intergenic 25.0%
! CAGAAAAAATATTTGTGACT+AGG + chr8_2:69540087-69540106 None:intergenic 25.0%
! TACCAAAGATATTAAGTGTA+GGG - chr8_2:69540151-69540170 Msa1265320:intron 25.0%
!!! TTTTTTGTCTGATAGTTTAG+TGG + chr8_2:69540233-69540252 None:intergenic 25.0%
!! AAAGAAGCTATCTTTTCATA+CGG - chr8_2:69540311-69540330 Msa1265320:intron 25.0%
!! AATATTTTCAGTAGAGAGAA+AGG - chr8_2:69540339-69540358 Msa1265320:intron 25.0%
!!! AACCACTTAAGTTTTGTTTA+CGG - chr8_2:69540417-69540436 Msa1265320:intron 25.0%
!! AATATTTTCAGTAGAGAGAA+AGG - chr8_2:69540339-69540358 Msa1265320:intron 25.0%
! TAATAATAAATGATCAGCGA+TGG - chr8_2:69540913-69540932 Msa1265320:intron 25.0%
!! ATTTTCCCAGTATATATGAA+AGG - chr8_2:69541565-69541584 Msa1265320:intron 25.0%
!! TTTTCCCAGTATATATGAAA+GGG - chr8_2:69541566-69541585 Msa1265320:intron 25.0%
! AATACCCTTTCATATATACT+GGG + chr8_2:69541573-69541592 None:intergenic 25.0%
! AAAAGTAGAAACTACGTTAA+AGG - chr8_2:69541651-69541670 Msa1265320:intron 25.0%
! GCATAAAAAAGTAGATGATT+TGG - chr8_2:69541748-69541767 Msa1265320:intron 25.0%
!! GTTTTATAATTAGGAATTGG+AGG - chr8_2:69542327-69542346 Msa1265320:intron 25.0%
! GAACAGTTTATAATAGGAAT+TGG - chr8_2:69542350-69542369 Msa1265320:intron 25.0%
! AGTTTATAATAGGAATTGGA+GGG - chr8_2:69542354-69542373 Msa1265320:intron 25.0%
! TGAGAAATTACAAATTCTTC+TGG - chr8_2:69542422-69542441 Msa1265320:intron 25.0%
! TAATCATACGTTGAAAACTA+AGG + chr8_2:69542645-69542664 None:intergenic 25.0%
!! TCTTTTGGTGAACATATATT+TGG + chr8_2:69542716-69542735 None:intergenic 25.0%
! ATGTTCACCAAAAGAAAAAA+CGG - chr8_2:69542721-69542740 Msa1265320:intron 25.0%
! TCAAAATAAGTTATCAAAGG+TGG + chr8_2:69543185-69543204 None:intergenic 25.0%
! ATTTGAATAAAATTGGCTAC+AGG - chr8_2:69543204-69543223 Msa1265320:intron 25.0%
!! TGTAGCATAGTAAGTTTTTA+GGG + chr8_2:69543724-69543743 None:intergenic 25.0%
!! CATTTGTTTGTTGCAAAAAT+AGG - chr8_2:69544413-69544432 Msa1265320:CDS 25.0%
! AAGAAAATTATGAACTGAAG+TGG - chr8_2:69544442-69544461 Msa1265320:CDS 25.0%
!!! AAGTTTTCATGTCATTTTGT+AGG + chr8_2:69545039-69545058 None:intergenic 25.0%
! ACTTAATGTTTCAAGCTTAT+AGG + chr8_2:69545104-69545123 None:intergenic 25.0%
! CTGTTAAAAAGAAAGTTGAA+AGG + chr8_2:69545255-69545274 None:intergenic 25.0%
!! CTTTCAACTTTCTTTTTAAC+AGG - chr8_2:69545253-69545272 Msa1265320:CDS 25.0%
! ATAATTGTAGAAGTCAAAGA+GGG - chr8_2:69545537-69545556 Msa1265320:intron 25.0%
TATGTATGAAATGTGTTTGG+TGG + chr8_2:69538901-69538920 None:intergenic 30.0%
! TTTGATTTAGCTAAGTTTGG+TGG + chr8_2:69538954-69538973 None:intergenic 30.0%
!!! TCTTGTTTTTGTTCTTGTTG+TGG + chr8_2:69539034-69539053 None:intergenic 30.0%
GTGTTGGAATTTCAATATCA+GGG + chr8_2:69539078-69539097 None:intergenic 30.0%
TGTGTTGGAATTTCAATATC+AGG + chr8_2:69539079-69539098 None:intergenic 30.0%
! TGTTGAATTGAGAAAGGTTT+TGG + chr8_2:69539126-69539145 None:intergenic 30.0%
!!! GATGAGTTTAGTTTTTGTTG+CGG + chr8_2:69539392-69539411 None:intergenic 30.0%
TGTGTTAACATAACACCTTT+AGG + chr8_2:69539625-69539644 None:intergenic 30.0%
ACAATATCACAGTTAGTTGA+CGG - chr8_2:69539661-69539680 Msa1265320:three_prime_UTR 30.0%
AGTGCATAGATATGAAACAT+AGG + chr8_2:69539739-69539758 None:intergenic 30.0%
!!! GTTTTAGCATTGGTAAAAAG+TGG - chr8_2:69539889-69539908 Msa1265320:CDS 30.0%
!! TTTAGCATTGGTAAAAAGTG+GGG - chr8_2:69539891-69539910 Msa1265320:CDS 30.0%
TCTATTAGAGTGATGATAAC+TGG - chr8_2:69539937-69539956 Msa1265320:CDS 30.0%
CTACCAAAGATATTAAGTGT+AGG - chr8_2:69540150-69540169 Msa1265320:intron 30.0%
ACCAAAGATATTAAGTGTAG+GGG - chr8_2:69540152-69540171 Msa1265320:intron 30.0%
TAGATTTCACACTTTATGTG+TGG + chr8_2:69540209-69540228 None:intergenic 30.0%
! AAGAAGCTATCTTTTCATAC+GGG - chr8_2:69540312-69540331 Msa1265320:intron 30.0%
!!! ACCACTTAAGTTTTGTTTAC+GGG - chr8_2:69540418-69540437 Msa1265320:intron 30.0%
! TTTTTGTGTACAACTGATCA+AGG + chr8_2:69540860-69540879 None:intergenic 30.0%
ACAAGTTCCCATTTCAAAAT+TGG - chr8_2:69540942-69540961 Msa1265320:intron 30.0%
CAAGTTCCCATTTCAAAATT+GGG - chr8_2:69540943-69540962 Msa1265320:intron 30.0%
!!! CCTTAACCCAATTTTGAAAT+GGG + chr8_2:69540952-69540971 None:intergenic 30.0%
ATGAATACCTTTCATAACCT+TGG + chr8_2:69541499-69541518 None:intergenic 30.0%
! TATAAGTTGAGTACAATGAG+TGG + chr8_2:69541539-69541558 None:intergenic 30.0%
GAATACCCTTTCATATATAC+TGG + chr8_2:69541574-69541593 None:intergenic 30.0%
AATTTAACAAGGTCTTGCTA+AGG - chr8_2:69541616-69541635 Msa1265320:intron 30.0%
ATTTAACAAGGTCTTGCTAA+GGG - chr8_2:69541617-69541636 Msa1265320:intron 30.0%
AAATTGAATATACATGCACC+AGG - chr8_2:69541726-69541745 Msa1265320:intron 30.0%
!!! ATCATCTACTTTTTTATGCC+TGG + chr8_2:69541747-69541766 None:intergenic 30.0%
!! AAAAGTAGATGATTTGGTTG+AGG - chr8_2:69541754-69541773 Msa1265320:intron 30.0%
!! AAAGTAGATGATTTGGTTGA+GGG - chr8_2:69541755-69541774 Msa1265320:intron 30.0%
!!! TATTTTGATCGATGATATGG+TGG - chr8_2:69541854-69541873 Msa1265320:intron 30.0%
TGATGTATACACTTCTAACA+AGG + chr8_2:69542135-69542154 None:intergenic 30.0%
CAGTTTATAATAGGAATTGG+AGG - chr8_2:69542353-69542372 Msa1265320:intron 30.0%
TGTTCACCAAAAGAAAAAAC+GGG - chr8_2:69542722-69542741 Msa1265320:intron 30.0%
ATTGCTGTAAAATGAGAAAG+TGG + chr8_2:69542945-69542964 None:intergenic 30.0%
ATCCAACATTATAGTTGTGT+TGG - chr8_2:69543153-69543172 Msa1265320:intron 30.0%
ATCCAACACAACTATAATGT+TGG + chr8_2:69543158-69543177 None:intergenic 30.0%
TTGAATTAGTGAAGTGAGTT+AGG + chr8_2:69543415-69543434 None:intergenic 30.0%
TTTATGAAAACACTCCTATG+TGG + chr8_2:69543448-69543467 None:intergenic 30.0%
ATGAAAACACTGATATGGTT+AGG + chr8_2:69543492-69543511 None:intergenic 30.0%
! GTGTAGCATAGTAAGTTTTT+AGG + chr8_2:69543725-69543744 None:intergenic 30.0%
AAAACTTACTATGCTACACA+TGG - chr8_2:69543726-69543745 Msa1265320:intron 30.0%
GAACTATAGACAAAGAAGAA+TGG - chr8_2:69543796-69543815 Msa1265320:intron 30.0%
ATCTCTAGTCTAGTTACTTA+CGG + chr8_2:69543981-69544000 None:intergenic 30.0%
!!! ATTTTTTCCGTCACTAACTT+TGG - chr8_2:69544046-69544065 Msa1265320:intron 30.0%
TTAGTAACCAAAGTTAGTGA+CGG + chr8_2:69544056-69544075 None:intergenic 30.0%
!!! TGAACTGAAGTGGTTTTAAT+TGG - chr8_2:69544452-69544471 Msa1265320:CDS 30.0%
! ACTGCATTTTCATATGAAGT+TGG + chr8_2:69544643-69544662 None:intergenic 30.0%
!! GAAAATGGACTTCGATTTTA+TGG - chr8_2:69544937-69544956 Msa1265320:CDS 30.0%
! ATTTGGCTTCAAACATTACA+TGG - chr8_2:69544994-69545013 Msa1265320:CDS 30.0%
! TTTGGCTTCAAACATTACAT+GGG - chr8_2:69544995-69545014 Msa1265320:CDS 30.0%
AAACATTACATGGGTTTACT+TGG - chr8_2:69545004-69545023 Msa1265320:CDS 30.0%
! TAGTTATTTGCATTGACCTT+TGG + chr8_2:69545285-69545304 None:intergenic 30.0%
! CTCTTTGACTTCTACAATTA+TGG + chr8_2:69545538-69545557 None:intergenic 30.0%
CATAATTGTAGAAGTCAAAG+AGG - chr8_2:69545536-69545555 Msa1265320:intron 30.0%
!! TGAAAGAGTGTCATATAAGT+CGG - chr8_2:69545592-69545611 Msa1265320:five_prime_UTR 30.0%
TCAGACGTGTGTGAATAATA+TGG - chr8_2:69538794-69538813 Msa1265320:three_prime_UTR 35.0%
TGGTAACATCAGTAGTTGTT+GGG + chr8_2:69538830-69538849 None:intergenic 35.0%
ATGGTAACATCAGTAGTTGT+TGG + chr8_2:69538831-69538850 None:intergenic 35.0%
! AAATGTGTTTGGTGGTAGTT+TGG + chr8_2:69538893-69538912 None:intergenic 35.0%
!! TGTTTTTGTTCTTGTTGTGG+AGG + chr8_2:69539031-69539050 None:intergenic 35.0%
! AACAGTATGAGTGTAATGGA+AGG + chr8_2:69539102-69539121 None:intergenic 35.0%
TGGAAACAGTATGAGTGTAA+TGG + chr8_2:69539106-69539125 None:intergenic 35.0%
TTACTATGTGGTATTCGTTC+TGG - chr8_2:69539769-69539788 Msa1265320:three_prime_UTR 35.0%
ACCAATGCTAAAACAATTGG+TGG + chr8_2:69539883-69539902 None:intergenic 35.0%
TTGAACAAGCTGTTAAGGAT+AGG - chr8_2:69539983-69540002 Msa1265320:intron 35.0%
ACCCGTAAACAAAACTTAAG+TGG + chr8_2:69540422-69540441 None:intergenic 35.0%
CCCATTTCAAAATTGGGTTA+AGG - chr8_2:69540949-69540968 Msa1265320:intron 35.0%
!! GCCTTAACCCAATTTTGAAA+TGG + chr8_2:69540953-69540972 None:intergenic 35.0%
GAAATACTCAATAACTCGTG+AGG - chr8_2:69541279-69541298 Msa1265320:intron 35.0%
GATATATGCTACAGGGATAT+GGG - chr8_2:69541301-69541320 Msa1265320:intron 35.0%
AATGCCAAGCTAATTGAAAG+TGG + chr8_2:69541342-69541361 None:intergenic 35.0%
! AATTAGCTTGGCATTTGCAA+AGG - chr8_2:69541347-69541366 Msa1265320:intron 35.0%
AAACGCTGAGATGAAAATAG+TGG - chr8_2:69541413-69541432 Msa1265320:intron 35.0%
!! AAAATAGTGGACACAGAAAC+TGG - chr8_2:69541426-69541445 Msa1265320:intron 35.0%
!! ATTTCACCAGCTTTGTTTCT+TGG + chr8_2:69541462-69541481 None:intergenic 35.0%
GCTGGTGAAATTTGTATTAG+AGG - chr8_2:69541471-69541490 Msa1265320:intron 35.0%
!! AATTTGTATTAGAGGCACCA+AGG - chr8_2:69541479-69541498 Msa1265320:intron 35.0%
TGAGTGGAGCATATAAGAAT+AGG + chr8_2:69541523-69541542 None:intergenic 35.0%
TTTAACAAGGTCTTGCTAAG+GGG - chr8_2:69541618-69541637 Msa1265320:intron 35.0%
!! AAGTAGATGATTTGGTTGAG+GGG - chr8_2:69541756-69541775 Msa1265320:intron 35.0%
!! GGTGGATAAAGTTGATGATT+TGG - chr8_2:69541793-69541812 Msa1265320:intron 35.0%
GACAGTAAAAGTTGCACTTA+TGG - chr8_2:69541889-69541908 Msa1265320:intron 35.0%
AACACTTGTGTATGTACTGT+GGG + chr8_2:69541938-69541957 None:intergenic 35.0%
AAACACTTGTGTATGTACTG+TGG + chr8_2:69541939-69541958 None:intergenic 35.0%
ATCGTGTGTAAATCTGCTTT+CGG + chr8_2:69541969-69541988 None:intergenic 35.0%
TGTTGTTCACACATAGTGTT+TGG - chr8_2:69541992-69542011 Msa1265320:intron 35.0%
TAACTGCCGATGAAGTTATA+TGG + chr8_2:69542040-69542059 None:intergenic 35.0%
! TGTCGTCGGTTAAAATTCAT+CGG + chr8_2:69542067-69542086 None:intergenic 35.0%
! GCACCTCATTTTCAATGATT+GGG - chr8_2:69542170-69542189 Msa1265320:intron 35.0%
ACTATATGCTCGTGAACAAT+TGG + chr8_2:69542196-69542215 None:intergenic 35.0%
GTTCACGAGCATATAGTATA+TGG - chr8_2:69542199-69542218 Msa1265320:intron 35.0%
TGGAGGGAACAGTTTATAAT+AGG - chr8_2:69542344-69542363 Msa1265320:intron 35.0%
!! ATCCCATGAGACTAGTTTAA+TGG - chr8_2:69542463-69542482 Msa1265320:intron 35.0%
!! TCCCATGAGACTAGTTTAAT+GGG - chr8_2:69542464-69542483 Msa1265320:intron 35.0%
! ACCCATTAAACTAGTCTCAT+GGG + chr8_2:69542468-69542487 None:intergenic 35.0%
! TACCCATTAAACTAGTCTCA+TGG + chr8_2:69542469-69542488 None:intergenic 35.0%
!!! CTAAGTCCCGTTTTTTCTTT+TGG + chr8_2:69542731-69542750 None:intergenic 35.0%
CAAAAGAAAAAACGGGACTT+AGG - chr8_2:69542729-69542748 Msa1265320:intron 35.0%
ATGATGCATAGGTGAAGATT+AGG + chr8_2:69542818-69542837 None:intergenic 35.0%
! ATTGTGTTCTGATGATGCAT+AGG + chr8_2:69542829-69542848 None:intergenic 35.0%
TTTCAGCTAAAGAGCTAAAG+AGG - chr8_2:69542919-69542938 Msa1265320:intron 35.0%
!! AACTTCTAAAATAGCAGCTG+AGG - chr8_2:69542968-69542987 Msa1265320:CDS 35.0%
!! ACTTCTAAAATAGCAGCTGA+GGG - chr8_2:69542969-69542988 Msa1265320:CDS 35.0%
AAAGTATGCACAAATAAGGG+CGG + chr8_2:69543023-69543042 None:intergenic 35.0%
ACTCACTTCACTAATTCAAG+TGG - chr8_2:69543416-69543435 Msa1265320:intron 35.0%
AGATTGAAAGATGAAGATGC+TGG - chr8_2:69544158-69544177 Msa1265320:intron 35.0%
!! GCATTTGTTGTAGGATCAAA+CGG - chr8_2:69544194-69544213 Msa1265320:intron 35.0%
CAAGCAATACATATCACAAC+AGG - chr8_2:69544241-69544260 Msa1265320:intron 35.0%
TGTTATGGGAGATGAGTTTA+AGG - chr8_2:69544303-69544322 Msa1265320:intron 35.0%
TTAACTGCAAGACTTAACGA+AGG - chr8_2:69544565-69544584 Msa1265320:CDS 35.0%
AAAATGCAGTTGCATATGCA+TGG - chr8_2:69544653-69544672 Msa1265320:CDS 35.0%
! TGTGTCTTTTGTGTGCATAT+TGG - chr8_2:69544766-69544785 Msa1265320:CDS 35.0%
AATCCTGCGACTCAATATAT+AGG - chr8_2:69544840-69544859 Msa1265320:CDS 35.0%
TTTATATCCCCTAACAAGCA+GGG + chr8_2:69544877-69544896 None:intergenic 35.0%
ATTTATATCCCCTAACAAGC+AGG + chr8_2:69544878-69544897 None:intergenic 35.0%
CTTAGATCTGTTAGTCACAT+CGG - chr8_2:69544971-69544990 Msa1265320:CDS 35.0%
GGAAGAACAAAAGAAAACGA+CGG + chr8_2:69545198-69545217 None:intergenic 35.0%
! TTTTAACAGGCTTCTTCCAA+AGG - chr8_2:69545266-69545285 Msa1265320:CDS 35.0%
! CTGATTTGATGTCTTCCTTT+AGG + chr8_2:69545411-69545430 None:intergenic 35.0%
AGGAAGACATCAAATCAGAA+AGG - chr8_2:69545413-69545432 Msa1265320:exon 35.0%
GGAAGACATCAAATCAGAAA+GGG - chr8_2:69545414-69545433 Msa1265320:exon 35.0%
TGTACAAGTTTCCCATGATA+AGG - chr8_2:69545454-69545473 Msa1265320:five_prime_UTR 35.0%
TTACTGGAACTCCTTATCAT+GGG + chr8_2:69545468-69545487 None:intergenic 35.0%
GATATCTCTTCTTACCTTAC+TGG + chr8_2:69545484-69545503 None:intergenic 35.0%
CAAGATTACCTTTCAAATGC+AGG + chr8_2:69545566-69545585 None:intergenic 35.0%
! GTTTGGTGGTAGTTTGGTTA+TGG + chr8_2:69538887-69538906 None:intergenic 40.0%
! TTAGCTAAGTTTGGTGGATC+TGG + chr8_2:69538948-69538967 None:intergenic 40.0%
CAATATCAGGGAGCTTAGAA+CGG + chr8_2:69539066-69539085 None:intergenic 40.0%
GACGGTTGTTGAATTGAGAA+AGG + chr8_2:69539132-69539151 None:intergenic 40.0%
!! GATTCCAAGAGTGTTTAGAC+CGG + chr8_2:69539230-69539249 None:intergenic 40.0%
AACACTCTTGGAATCCAACA+AGG - chr8_2:69539235-69539254 Msa1265320:three_prime_UTR 40.0%
TCATGATGACATCACCTTGT+TGG + chr8_2:69539252-69539271 None:intergenic 40.0%
GTGCAAATTGAGGAGAGTTA+CGG + chr8_2:69539282-69539301 None:intergenic 40.0%
AAATCCCTTCTACACCTCAT+CGG - chr8_2:69539348-69539367 Msa1265320:three_prime_UTR 40.0%
!!! GAGTTTAGTTTTTGTTGCGG+TGG + chr8_2:69539389-69539408 None:intergenic 40.0%
!! TGTGTGCATTGATTCATCAC+CGG - chr8_2:69539474-69539493 Msa1265320:three_prime_UTR 40.0%
CCAGAAGTTCCTGAAGAAAA+CGG + chr8_2:69539598-69539617 None:intergenic 40.0%
!! GGAACTTCTGGTTTACCTAA+AGG - chr8_2:69539607-69539626 Msa1265320:three_prime_UTR 40.0%
! TCGTAGTTTGTGTATTGGTG+TGG + chr8_2:69539694-69539713 None:intergenic 40.0%
ACACCAATACACAAACTACG+AGG - chr8_2:69539693-69539712 Msa1265320:three_prime_UTR 40.0%
! CATCCTCGTAGTTTGTGTAT+TGG + chr8_2:69539699-69539718 None:intergenic 40.0%
!!! GCCACCAATTGTTTTAGCAT+TGG - chr8_2:69539879-69539898 Msa1265320:CDS 40.0%
! TGTTCAAGTTCCATTCCCAT+GGG + chr8_2:69539970-69539989 None:intergenic 40.0%
! TTGTTCAAGTTCCATTCCCA+TGG + chr8_2:69539971-69539990 None:intergenic 40.0%
GGAACTTGAACAAGCTGTTA+AGG - chr8_2:69539978-69539997 Msa1265320:intron 40.0%
GCCCCTACACTTAATATCTT+TGG + chr8_2:69540156-69540175 None:intergenic 40.0%
AAGATATTAAGTGTAGGGGC+TGG - chr8_2:69540156-69540175 Msa1265320:intron 40.0%
ACTTTATGTGTGGAGAAGTG+GGG + chr8_2:69540199-69540218 None:intergenic 40.0%
CACTTTATGTGTGGAGAAGT+GGG + chr8_2:69540200-69540219 None:intergenic 40.0%
ACACTTTATGTGTGGAGAAG+TGG + chr8_2:69540201-69540220 None:intergenic 40.0%
TCGTGAGGATATATGCTACA+GGG - chr8_2:69541294-69541313 Msa1265320:intron 40.0%
GGATATATGCTACAGGGATA+TGG - chr8_2:69541300-69541319 Msa1265320:intron 40.0%
AGGACCACTTTCAATTAGCT+TGG - chr8_2:69541335-69541354 Msa1265320:intron 40.0%
!! ACCAGCTTTGTTTCTTGGAA+GGG + chr8_2:69541457-69541476 None:intergenic 40.0%
TTAACAAGGTCTTGCTAAGG+GGG - chr8_2:69541619-69541638 Msa1265320:intron 40.0%
!! TCGATGATATGGTGGATTAG+TGG - chr8_2:69541862-69541881 Msa1265320:intron 40.0%
!! ATGATATGGTGGATTAGTGG+TGG - chr8_2:69541865-69541884 Msa1265320:intron 40.0%
!! TGATATGGTGGATTAGTGGT+GGG - chr8_2:69541866-69541885 Msa1265320:intron 40.0%
TGTGTAAATCTGCTTTCGGT+TGG + chr8_2:69541965-69541984 None:intergenic 40.0%
! CGCACCTCATTTTCAATGAT+TGG - chr8_2:69542169-69542188 Msa1265320:intron 40.0%
TGGCCCAATCATTGAAAATG+AGG + chr8_2:69542176-69542195 None:intergenic 40.0%
!! GAGACTAGTTTAATGGGTAG+AGG - chr8_2:69542470-69542489 Msa1265320:intron 40.0%
!! GTAAAAGAATGGGCTGAGTA+AGG - chr8_2:69542671-69542690 Msa1265320:intron 40.0%
GTACACGTTTAGCACTACAA+TGG + chr8_2:69543000-69543019 None:intergenic 40.0%
AAGTATGCACAAATAAGGGC+GGG + chr8_2:69543022-69543041 None:intergenic 40.0%
TACAGTGCTTCTTACGCATA+AGG + chr8_2:69543069-69543088 None:intergenic 40.0%
TTAGTGAAGTGAGTTAGGTG+AGG + chr8_2:69543410-69543429 None:intergenic 40.0%
AACACTGATATGGTTAGGTG+AGG + chr8_2:69543487-69543506 None:intergenic 40.0%
ATCAGGATACCTAAATGACC+CGG - chr8_2:69543761-69543780 Msa1265320:intron 40.0%
ATAGTTCTCTTTGTTGCCTC+CGG + chr8_2:69543783-69543802 None:intergenic 40.0%
AAAGAAGAATGGCTACACAC+AGG - chr8_2:69543807-69543826 Msa1265320:intron 40.0%
ACAGCAGCATCAGAAATGTT+CGG + chr8_2:69543954-69543973 None:intergenic 40.0%
TATGAAAACCGTTAGTGACG+AGG - chr8_2:69544010-69544029 Msa1265320:intron 40.0%
ATGAAAACCGTTAGTGACGA+GGG - chr8_2:69544011-69544030 Msa1265320:intron 40.0%
!! GTTCCAGTTGCATTTGTTGT+AGG - chr8_2:69544185-69544204 Msa1265320:intron 40.0%
GATCCTACAACAAATGCAAC+TGG + chr8_2:69544191-69544210 None:intergenic 40.0%
AAACGGTTCAAAGATCAGTG+AGG - chr8_2:69544211-69544230 Msa1265320:intron 40.0%
!!! AAGTGGTTTTAATTGGCTGC+AGG - chr8_2:69544459-69544478 Msa1265320:CDS 40.0%
! CTTTCGCAGAATTTTTCCTG+AGG + chr8_2:69544542-69544561 None:intergenic 40.0%
CTCAGGAAAAATTCTGCGAA+AGG - chr8_2:69544540-69544559 Msa1265320:CDS 40.0%
GTAGTTGCCACGAATTAAGT+CGG - chr8_2:69544592-69544611 Msa1265320:CDS 40.0%
ATGTGCAATATCCGTTTCTG+TGG - chr8_2:69544722-69544741 Msa1265320:CDS 40.0%
TGTGCAATATCCGTTTCTGT+GGG - chr8_2:69544723-69544742 Msa1265320:CDS 40.0%
AGAATTTGCACCCACAGAAA+CGG + chr8_2:69544736-69544755 None:intergenic 40.0%
TTATATCCCCTAACAAGCAG+GGG + chr8_2:69544876-69544895 None:intergenic 40.0%
CGATGTGACTAACAGATCTA+AGG + chr8_2:69544973-69544992 None:intergenic 40.0%
TCTGTTAGTCACATCGGATT+TGG - chr8_2:69544977-69544996 Msa1265320:CDS 40.0%
CATTACATGGGTTTACTTGG+AGG - chr8_2:69545007-69545026 Msa1265320:CDS 40.0%
CATCGAATCTTCAGACAAAG+AGG + chr8_2:69545219-69545238 None:intergenic 40.0%
TTGTCTGAAGATTCGATGAC+TGG - chr8_2:69545221-69545240 Msa1265320:CDS 40.0%
!! CAAGTTTAAAAGGAGCATCG+AGG - chr8_2:69545336-69545355 Msa1265320:CDS 40.0%
GCATCGAGGATAAACAAGAA+TGG - chr8_2:69545350-69545369 Msa1265320:CDS 40.0%
CCTTTAGGCAACATTTCGAA+TGG + chr8_2:69545396-69545415 None:intergenic 40.0%
CCATTCGAAATGTTGCCTAA+AGG - chr8_2:69545393-69545412 Msa1265320:CDS 40.0%
AAAGGGTCACAAACTTTGTC+AGG - chr8_2:69545431-69545450 Msa1265320:five_prime_UTR 40.0%
CTTACTGGAACTCCTTATCA+TGG + chr8_2:69545469-69545488 None:intergenic 40.0%
CATGATAAGGAGTTCCAGTA+AGG - chr8_2:69545467-69545486 Msa1265320:five_prime_UTR 40.0%
CATCAGTAGTTGTTGGGACA+GGG + chr8_2:69538824-69538843 None:intergenic 45.0%
ACATCAGTAGTTGTTGGGAC+AGG + chr8_2:69538825-69538844 None:intergenic 45.0%
TGGATCTGGTGGAGCTAATT+TGG + chr8_2:69538934-69538953 None:intergenic 45.0%
! TGTTCTTGTTGTGGAGGAGA+TGG + chr8_2:69539025-69539044 None:intergenic 45.0%
! GAGTGTAATGGAAGGTGTGT+TGG + chr8_2:69539094-69539113 None:intergenic 45.0%
AACCGTCCATGTCTCATCAA+CGG - chr8_2:69539145-69539164 Msa1265320:three_prime_UTR 45.0%
CAAATTGAGGAGAGTTACGG+AGG + chr8_2:69539279-69539298 None:intergenic 45.0%
AGGAAGGTGAGTGCAAATTG+AGG + chr8_2:69539292-69539311 None:intergenic 45.0%
CAATTTGCACTCACCTTCCT+CGG - chr8_2:69539292-69539311 Msa1265320:three_prime_UTR 45.0%
TGAGGTGTAGAAGGGATTTG+CGG + chr8_2:69539347-69539366 None:intergenic 45.0%
AGTTCCGATGAGGTGTAGAA+GGG + chr8_2:69539355-69539374 None:intergenic 45.0%
TTGTTTAGCCAGTTCCGATG+AGG + chr8_2:69539365-69539384 None:intergenic 45.0%
ACAACACGTTCATCTTCCTC+CGG + chr8_2:69539496-69539515 None:intergenic 45.0%
GTAACGCAACTACGTCGTTT+GGG + chr8_2:69539576-69539595 None:intergenic 45.0%
! GTTGCGTTACCGTTTTCTTC+AGG - chr8_2:69539586-69539605 Msa1265320:three_prime_UTR 45.0%
! CCGTTTTCTTCAGGAACTTC+TGG - chr8_2:69539595-69539614 Msa1265320:three_prime_UTR 45.0%
GAACTGTACTTGGACAGGTT+TGG - chr8_2:69540013-69540032 Msa1265320:intron 45.0%
CACCAGCTACTCGATTACTT+TGG + chr8_2:69541229-69541248 None:intergenic 45.0%
CTCGTGAGGATATATGCTAC+AGG - chr8_2:69541293-69541312 Msa1265320:intron 45.0%
GAACCATTCAAGACAAAGCC+TGG - chr8_2:69541369-69541388 Msa1265320:intron 45.0%
TCCCTTCCAAGAAACAAAGC+TGG - chr8_2:69541453-69541472 Msa1265320:intron 45.0%
!! CACCAGCTTTGTTTCTTGGA+AGG + chr8_2:69541458-69541477 None:intergenic 45.0%
!! AGAGGCACCAAGGTTATGAA+AGG - chr8_2:69541489-69541508 Msa1265320:intron 45.0%
!! GATATGGTGGATTAGTGGTG+GGG - chr8_2:69541867-69541886 Msa1265320:intron 45.0%
TGTATGTACTGTGGGACTAC+GGG + chr8_2:69541930-69541949 None:intergenic 45.0%
GTGTATGTACTGTGGGACTA+CGG + chr8_2:69541931-69541950 None:intergenic 45.0%
CATCGACAGTTAACTGTCGT+CGG + chr8_2:69542081-69542100 None:intergenic 45.0%
!! GATTGGTGTAGTTGGTGGTT+GGG + chr8_2:69542758-69542777 None:intergenic 45.0%
CGTTTAGCACTACAATGGCT+TGG + chr8_2:69542995-69543014 None:intergenic 45.0%
! AGAAAAGGTGTGTGCACCAT+AGG - chr8_2:69543352-69543371 Msa1265320:intron 45.0%
AAGTGAGTTAGGTGAGGATG+TGG + chr8_2:69543404-69543423 None:intergenic 45.0%
TCAAGTGGACAAGTCCACAT+AGG - chr8_2:69543431-69543450 Msa1265320:intron 45.0%
GATATGGTTAGGTGAGGATG+TGG + chr8_2:69543481-69543500 None:intergenic 45.0%
! CATGGTTTGTGACTGTGATC+AGG - chr8_2:69543744-69543763 Msa1265320:intron 45.0%
TAGTTCTCTTTGTTGCCTCC+GGG + chr8_2:69543782-69543801 None:intergenic 45.0%
! ATTTTTCCTGAGGCGGCTTT+AGG + chr8_2:69544532-69544551 None:intergenic 45.0%
! TCGCAGAATTTTTCCTGAGG+CGG + chr8_2:69544539-69544558 None:intergenic 45.0%
TGCAAGACTTAACGAAGGTC+TGG - chr8_2:69544570-69544589 Msa1265320:CDS 45.0%
!! TGTCACACCGACTTAATTCG+TGG + chr8_2:69544602-69544621 None:intergenic 45.0%
AGGCCTATATATTGAGTCGC+AGG + chr8_2:69544846-69544865 None:intergenic 45.0%
TATATCCCCTAACAAGCAGG+GGG + chr8_2:69544875-69544894 None:intergenic 45.0%
AAACGACGGAAAGCAAATCC+AGG + chr8_2:69545184-69545203 None:intergenic 45.0%
TGAAGATTCGATGACTGGCA+AGG - chr8_2:69545226-69545245 Msa1265320:CDS 45.0%
!! ATTATTACAAATAATATAAA+TGG - chr8_2:69541201-69541220 Msa1265320:intron 5.0%
!! TTATTACAAATAATATAAAT+GGG - chr8_2:69541202-69541221 Msa1265320:intron 5.0%
!!! TTTTTTATAATAATTTAACA+AGG - chr8_2:69541605-69541624 Msa1265320:intron 5.0%
!!! TAAAATTTTTGTTAAAAAAA+AGG - chr8_2:69543268-69543287 Msa1265320:intron 5.0%
! GCTAAGTTTGGTGGATCTGG+TGG + chr8_2:69538945-69538964 None:intergenic 50.0%
TGTTGTGGAGGAGATGGAGA+TGG + chr8_2:69539019-69539038 None:intergenic 50.0%
! TGCCGTTGATGAGACATGGA+CGG + chr8_2:69539150-69539169 None:intergenic 50.0%
! GTGTTGCCGTTGATGAGACA+TGG + chr8_2:69539154-69539173 None:intergenic 50.0%
TGTCTCATCAACGGCAACAC+CGG - chr8_2:69539154-69539173 Msa1265320:three_prime_UTR 50.0%
GGAGTAGGTTAGGGTTTCTC+CGG + chr8_2:69539176-69539195 None:intergenic 50.0%
!! TCCAAGAGTGTTTAGACCGG+CGG + chr8_2:69539227-69539246 None:intergenic 50.0%
CAGTTCCGATGAGGTGTAGA+AGG + chr8_2:69539356-69539375 None:intergenic 50.0%
CTTCTACACCTCATCGGAAC+TGG - chr8_2:69539354-69539373 Msa1265320:three_prime_UTR 50.0%
!! GTGCATTGATTCATCACCGG+AGG - chr8_2:69539477-69539496 Msa1265320:three_prime_UTR 50.0%
GGAGGAAGATGAACGTGTTG+TGG - chr8_2:69539495-69539514 Msa1265320:three_prime_UTR 50.0%
GGTAACGCAACTACGTCGTT+TGG + chr8_2:69539577-69539596 None:intergenic 50.0%
!! ATAACTGGTGCTGCTCCCAT+GGG - chr8_2:69539952-69539971 Msa1265320:intron 50.0%
AGGTTGCCACGAACTGTACT+TGG - chr8_2:69540003-69540022 Msa1265320:intron 50.0%
ACCTGTCCAAGTACAGTTCG+TGG + chr8_2:69540012-69540031 None:intergenic 50.0%
AGCTACGCTGGACTTGTGAT+AGG + chr8_2:69540120-69540139 None:intergenic 50.0%
GGCCAAAGTAATCGAGTAGC+TGG - chr8_2:69541224-69541243 Msa1265320:intron 50.0%
ACAGGGATATGGGATGACAG+AGG - chr8_2:69541311-69541330 Msa1265320:intron 50.0%
! GCACCAGGCTTTGTCTTGAA+TGG + chr8_2:69541375-69541394 None:intergenic 50.0%
AAGACAAAGCCTGGTGCATG+TGG - chr8_2:69541378-69541397 Msa1265320:intron 50.0%
! TGAGGGGTCGTGTTTGAGAT+TGG - chr8_2:69541772-69541791 Msa1265320:intron 50.0%
!! GGATTGGTGTAGTTGGTGGT+TGG + chr8_2:69542759-69542778 None:intergenic 50.0%
GTGATCGTGCGAGATTAGAC+AGG + chr8_2:69543101-69543120 None:intergenic 50.0%
CTCGCACGATCACTCGTTAA+AGG - chr8_2:69543108-69543127 Msa1265320:intron 50.0%
AGGATACCTAAATGACCCGG+AGG - chr8_2:69543764-69543783 Msa1265320:intron 50.0%
TTGTTGCCTCCGGGTCATTT+AGG + chr8_2:69543773-69543792 None:intergenic 50.0%
TGGCTACACACAGGTGACAT+TGG - chr8_2:69543816-69543835 Msa1265320:intron 50.0%
AACAATGCTTCGAGCTCAGC+AGG + chr8_2:69543921-69543940 None:intergenic 50.0%
AACCGTTAGTGACGAGGGAA+TGG - chr8_2:69544016-69544035 Msa1265320:intron 50.0%
CTCCATTCCCTCGTCACTAA+CGG + chr8_2:69544021-69544040 None:intergenic 50.0%
ACTATTCCTAAAGCCGCCTC+AGG - chr8_2:69544523-69544542 Msa1265320:CDS 50.0%
TAACAAGCAGGGGGAGGAAT+AGG + chr8_2:69544866-69544885 None:intergenic 50.0%
TATTCCTCCCCCTGCTTGTT+AGG - chr8_2:69544865-69544884 Msa1265320:CDS 50.0%
! ATTCCTCCCCCTGCTTGTTA+GGG - chr8_2:69544866-69544885 Msa1265320:CDS 50.0%
GAGGGCAACCTGCATTTGAA+AGG - chr8_2:69545555-69545574 Msa1265320:intron 50.0%
GTGGACGTCGGAGTAGGTTA+GGG + chr8_2:69539185-69539204 None:intergenic 55.0%
! TTAGACCGGCGGCGATTTTG+CGG + chr8_2:69539216-69539235 None:intergenic 55.0%
GGTGTAGAAGGGATTTGCGG+TGG + chr8_2:69539344-69539363 None:intergenic 55.0%
!! GATAACTGGTGCTGCTCCCA+TGG - chr8_2:69539951-69539970 Msa1265320:intron 55.0%
GCCACGAACTGTACTTGGAC+AGG - chr8_2:69540008-69540027 Msa1265320:intron 55.0%
CAAGTCCAGCGTAGCTCAGT+TGG - chr8_2:69540124-69540143 Msa1265320:intron 55.0%
AGCTACCAACTGAGCTACGC+TGG + chr8_2:69540132-69540151 None:intergenic 55.0%
GGATATGGGATGACAGAGGC+AGG - chr8_2:69541315-69541334 Msa1265320:intron 55.0%
! GGGGTCGTGTTTGAGATTGG+TGG - chr8_2:69541775-69541794 Msa1265320:intron 55.0%
! TTCCTCCCCCTGCTTGTTAG+GGG - chr8_2:69544867-69544886 Msa1265320:CDS 55.0%
GTCGCACTCTTCTGTCGTAG+AGG + chr8_2:69545162-69545181 None:intergenic 55.0%
! TACGACAGAAGAGTGCGACC+TGG - chr8_2:69545163-69545182 Msa1265320:CDS 55.0%
GGTGGACGTCGGAGTAGGTT+AGG + chr8_2:69539186-69539205 None:intergenic 60.0%
! CGATTTTGCGGACGGTGAGG+TGG + chr8_2:69539204-69539223 None:intergenic 60.0%
GCCGCCGGTCTAAACACTCT+TGG - chr8_2:69539223-69539242 Msa1265320:three_prime_UTR 60.0%
!! TGGTGCTGCTCCCATGGGAA+TGG - chr8_2:69539957-69539976 Msa1265320:intron 60.0%
ACGACTGTGCCACATGCACC+AGG + chr8_2:69541390-69541409 None:intergenic 60.0%
CGAGCTCAGCAGGAGCTACT+TGG + chr8_2:69543911-69543930 None:intergenic 60.0%
ATCCCCTAACAAGCAGGGGG+AGG + chr8_2:69544872-69544891 None:intergenic 60.0%
GGTGAGGTGGACGTCGGAGT+AGG + chr8_2:69539191-69539210 None:intergenic 65.0%
! CGGCGATTTTGCGGACGGTG+AGG + chr8_2:69539207-69539226 None:intergenic 65.0%
ACCGTCCGCAAAATCGCCGC+CGG - chr8_2:69539208-69539227 Msa1265320:three_prime_UTR 65.0%
! ACCGGCGGCGATTTTGCGGA+CGG + chr8_2:69539212-69539231 None:intergenic 65.0%
!! TTCCTCGGTGCCTCCTTCCG+CGG - chr8_2:69539307-69539326 Msa1265320:three_prime_UTR 65.0%
GCGGACGGTGAGGTGGACGT+CGG + chr8_2:69539197-69539216 None:intergenic 70.0%
!! GCGGAAGGAGGCACCGAGGA+AGG + chr8_2:69539308-69539327 None:intergenic 70.0%
GATAACCGCGCCGCGGAAGG+AGG + chr8_2:69539320-69539339 None:intergenic 70.0%
GGTGATAACCGCGCCGCGGA+AGG + chr8_2:69539323-69539342 None:intergenic 70.0%
CGGTGGTGATAACCGCGCCG+CGG + chr8_2:69539327-69539346 None:intergenic 70.0%
!!! CGCCGCGGAAGGAGGCACCG+AGG + chr8_2:69539312-69539331 None:intergenic 80.0%
! CGGTGCCTCCTTCCGCGGCG+CGG - chr8_2:69539312-69539331 Msa1265320:three_prime_UTR 80.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 69538780 69545660 69538780 ID=Msa1265320;Name=Msa1265320
chr8_2 mRNA 69538780 69545660 69538780 ID=Msa1265320-mRNA-1;Parent=Msa1265320;Name=Msa1265320-mRNA-1;_AED=0.01;_eAED=0.01;_QI=193|1|1|1|0.8|0.66|6|1051|553
chr8_2 exon 69538780 69539959 69538780 ID=Msa1265320-mRNA-1:exon:23006;Parent=Msa1265320-mRNA-1
chr8_2 exon 69540178 69540280 69540178 ID=Msa1265320-mRNA-1:exon:23005;Parent=Msa1265320-mRNA-1
chr8_2 exon 69540461 69540674 69540461 ID=Msa1265320-mRNA-1:exon:23004;Parent=Msa1265320-mRNA-1
chr8_2 exon 69542930 69543125 69542930 ID=Msa1265320-mRNA-1:exon:23003;Parent=Msa1265320-mRNA-1
chr8_2 exon 69544411 69545548 69544411 ID=Msa1265320-mRNA-1:exon:23002;Parent=Msa1265320-mRNA-1
chr8_2 exon 69545586 69545660 69545586 ID=Msa1265320-mRNA-1:exon:23001;Parent=Msa1265320-mRNA-1
chr8_2 five_prime_UTR 69545586 69545660 69545586 ID=Msa1265320-mRNA-1:five_prime_utr;Parent=Msa1265320-mRNA-1
chr8_2 five_prime_UTR 69545431 69545548 69545431 ID=Msa1265320-mRNA-1:five_prime_utr;Parent=Msa1265320-mRNA-1
chr8_2 CDS 69544411 69545430 69544411 ID=Msa1265320-mRNA-1:cds;Parent=Msa1265320-mRNA-1
chr8_2 CDS 69542930 69543125 69542930 ID=Msa1265320-mRNA-1:cds;Parent=Msa1265320-mRNA-1
chr8_2 CDS 69540461 69540674 69540461 ID=Msa1265320-mRNA-1:cds;Parent=Msa1265320-mRNA-1
chr8_2 CDS 69540178 69540280 69540178 ID=Msa1265320-mRNA-1:cds;Parent=Msa1265320-mRNA-1
chr8_2 CDS 69539831 69539959 69539831 ID=Msa1265320-mRNA-1:cds;Parent=Msa1265320-mRNA-1
chr8_2 three_prime_UTR 69538780 69539830 69538780 ID=Msa1265320-mRNA-1:three_prime_utr;Parent=Msa1265320-mRNA-1
Gene Sequence

>Msa1265320

ATGTTACCATCTCCATCTCCTCCACAACAAGAACAAAAACAAGAATTCATATTCCGTTCTAAGCTCCCTGATATTGAAATTCCAACACACCTTCCATTACACTCATACTGTTTCCAAAACCTTTCTCAATTCAACAACCGTCCATGTCTCATCAACGGCAACACCGGAGAAACCCTAACCTACTCCGACGTCCACCTCACCGTCCGCAAAATCGCCGCCGGTCTAAACACTCTTGGAATCCAACAAGGTGATGTCATCATGATCGTCCTCCGTAACTCTCCTCAATTTGCACTCACCTTCCTCGGTGCCTCCTTCCGCGGCGCGGTTATCACCACCGCAAATCCCTTCTACACCTCATCGGAACTGGCTAAACAAGCCACCGCAACAAAAACTAAACTCATCGTCACACAATCAGCATATCTCAATAAAATCAACGATTTCGCAAAACTCAACGACATCAAAATTGTGTGCATTGATTCATCACCGGAGGAAGATGAACGTGTTGTGGATTTTTCTGTTTTAACAAATGCTGATGAAAACGAATTACCAGAAGTTAAAATAAACCCAAACGACGTAGTTGCGTTACCGTTTTCTTCAGGAACTTCTGGTTTACCTAAAGGTGTTATGTTAACACATGAAAATTTAGTTACAACAATATCACAGTTAGTTGACGGTGAAAATCCACACCAATACACAAACTACGAGGATGTCTTACTCTGTGTGTTACCTATGTTTCATATCTATGCACTAAATTCGATTTTACTATGTGGTATTCGTTCTGGTGCTGCTGTTTTAATTGTTGAAAAATTTGAGATAACTAAGGTTTTGGAACTTATTGAAAAGTATAAGGTGACGGTAGCGTCGTTTGTGCCACCAATTGTTTTAGCATTGGTAAAAAGTGGGGAATCTATGAGATACGATTTGTCGTCTATTAGAGTGATGATAACTGGTGCTGCTCCCATGGGAATGGAACTTGAACAAGCTGTTAAGGATAGGTTGCCACGAACTGTACTTGGACAGGGATATGGGATGACAGAGGCAGGACCACTTTCAATTAGCTTGGCATTTGCAAAGGAACCATTCAAGACAAAGCCTGGTGCATGTGGCACAGTCGTCAGAAACGCTGAGATGAAAATAGTGGACACAGAAACTGGTGCTTCCCTTCCAAGAAACAAAGCTGGTGAAATTTGTATTAGAGGCACCAAGGTTATGAAAGGATACCTAAATGACCCGGAGGCAACAAAGAGAACTATAGACAAAGAAGAATGGCTACACACAGGTGACATTGGTTTAATTGACGACGATGATGAACTCTTCATTGTTGATCGATTGAAAGAATTGATTAAATACAAAGGATACCAAGTAGCTCCTGCTGAGCTCGAAGCATTGTTGATTGCTCATCCGAACATTTCTGATGCTGCTGTCGTACCATTGAAAGATGAAGATGCTGGAGAAGTTCCAGTTGCATTTGTTGTAGGATCAAACGGTTCAAAGATCAGTGAGGATGAAATCAAGCAATACATATCACAACAGGTTGTATTTTACAAGAGAATAAACAGAGTTTACTTCACAGAAACTATTCCTAAAGCCGCCTCAGGAAAAATTCTGCGAAAGGAATTAACTGCAAGACTTAACGAAGGTCTGGTAGTTGCCACGAATTAA
Protein sequence

>Msa1265320

MLPSPSPPQQEQKQEFIFRSKLPDIEIPTHLPLHSYCFQNLSQFNNRPCLINGNTGETLTYSDVHLTVRKIAAGLNTLGIQQGDVIMIVLRNSPQFALTFLGASFRGAVITTANPFYTSSELAKQATATKTKLIVTQSAYLNKINDFAKLNDIKIVCIDSSPEEDERVVDFSVLTNADENELPEVKINPNDVVALPFSSGTSGLPKGVMLTHENLVTTISQLVDGENPHQYTNYEDVLLCVLPMFHIYALNSILLCGIRSGAAVLIVEKFEITKVLELIEKYKVTVASFVPPIVLALVKSGESMRYDLSSIRVMITGAAPMGMELEQAVKDRLPRTVLGQGYGMTEAGPLSISLAFAKEPFKTKPGACGTVVRNAEMKIVDTETGASLPRNKAGEICIRGTKVMKGYLNDPEATKRTIDKEEWLHTGDIGLIDDDDELFIVDRLKELIKYKGYQVAPAELEALLIAHPNISDAAVVPLKDEDAGEVPVAFVVGSNGSKISEDEIKQYISQQVVFYKRINRVYFTETIPKAASGKILRKELTARLNEGLVVATN*