Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1268600 | G7J1G0 | 93.625 | 549 | 34 | 1 | 1 | 549 | 1 | 548 | 0.0 | 1075 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0737340 | Msa1268600 | 0.829460 | 5.084808e-55 | -8.615850e-47 |
| Msa0840350 | Msa1268600 | 0.939294 | 1.618410e-99 | -8.615850e-47 |
| Msa0213670 | Msa1268600 | 0.812743 | 3.635790e-51 | -8.615850e-47 |
| Msa1016740 | Msa1268600 | 0.835870 | 1.304711e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1268600 | MtrunA17_Chr4g0044661 | 43.609 | 532 | 228 | 8 | 28 | 544 | 7 | 481 | 1.60e-138 | 410 |
| Msa1268600 | MtrunA17_Chr1g0171051 | 46.341 | 328 | 108 | 5 | 20 | 314 | 41 | 333 | 7.78e-85 | 267 |
| Msa1268600 | MtrunA17_Chr5g0421991 | 50.360 | 278 | 130 | 2 | 279 | 548 | 2 | 279 | 2.40e-77 | 245 |
| Msa1268600 | MtrunA17_Chr2g0304851 | 35.443 | 395 | 228 | 8 | 25 | 416 | 2 | 372 | 8.95e-75 | 242 |
| Msa1268600 | MtrunA17_Chr1g0167871 | 34.018 | 438 | 273 | 9 | 29 | 461 | 207 | 633 | 9.37e-74 | 248 |
| Msa1268600 | MtrunA17_Chr5g0393531 | 33.971 | 209 | 124 | 4 | 28 | 234 | 1 | 197 | 2.95e-33 | 126 |
| Msa1268600 | MtrunA17_Chr7g0231491 | 35.714 | 210 | 127 | 4 | 29 | 234 | 36 | 241 | 1.74e-32 | 125 |
| Msa1268600 | MtrunA17_Chr5g0420451 | 32.850 | 207 | 126 | 3 | 28 | 234 | 2 | 195 | 1.43e-29 | 116 |
| Msa1268600 | MtrunA17_Chr5g0393521 | 29.614 | 233 | 156 | 5 | 283 | 511 | 9 | 237 | 3.62e-28 | 114 |
| Msa1268600 | MtrunA17_Chr7g0223511 | 39.189 | 148 | 88 | 1 | 26 | 173 | 22 | 167 | 4.58e-28 | 112 |
| Msa1268600 | MtrunA17_Chr8g0347361 | 35.503 | 169 | 103 | 3 | 26 | 192 | 9 | 173 | 1.02e-26 | 107 |
| Msa1268600 | MtrunA17_Chr6g0481111 | 39.706 | 136 | 79 | 2 | 30 | 164 | 3 | 136 | 4.21e-26 | 103 |
| Msa1268600 | MtrunA17_Chr1g0172341 | 43.590 | 117 | 64 | 1 | 26 | 142 | 1 | 115 | 4.39e-26 | 102 |
| Msa1268600 | MtrunA17_Chr1g0206481 | 29.066 | 289 | 182 | 10 | 47 | 325 | 20 | 295 | 1.76e-24 | 103 |
| Msa1268600 | MtrunA17_Chr4g0022201 | 55.102 | 98 | 43 | 1 | 18 | 115 | 66 | 162 | 6.76e-24 | 98.6 |
| Msa1268600 | MtrunA17_Chr5g0417421 | 30.978 | 184 | 121 | 4 | 316 | 497 | 110 | 289 | 6.37e-23 | 99.0 |
| Msa1268600 | MtrunA17_Chr2g0278111 | 24.542 | 273 | 195 | 5 | 32 | 299 | 5 | 271 | 4.50e-22 | 97.4 |
| Msa1268600 | MtrunA17_Chr5g0411141 | 24.542 | 273 | 195 | 5 | 32 | 299 | 6 | 272 | 5.22e-22 | 97.1 |
| Msa1268600 | MtrunA17_Chr5g0423441 | 25.726 | 241 | 171 | 4 | 32 | 267 | 5 | 242 | 2.07e-21 | 94.0 |
| Msa1268600 | MtrunA17_Chr5g0393801 | 44.660 | 103 | 55 | 1 | 28 | 130 | 1 | 101 | 8.20e-21 | 87.8 |
| Msa1268600 | MtrunA17_Chr6g0462951 | 35.385 | 130 | 82 | 1 | 111 | 238 | 2 | 131 | 2.92e-20 | 87.4 |
| Msa1268600 | MtrunA17_Chr2g0280031 | 26.609 | 233 | 156 | 5 | 47 | 266 | 1 | 231 | 1.23e-18 | 86.3 |
| Msa1268600 | MtrunA17_Chr1g0148611 | 30.612 | 147 | 100 | 2 | 91 | 235 | 16 | 162 | 3.00e-18 | 82.4 |
| Msa1268600 | MtrunA17_Chr8g0363071 | 28.758 | 153 | 107 | 2 | 79 | 229 | 5 | 157 | 2.54e-17 | 79.3 |
| Msa1268600 | MtrunA17_Chr3g0096071 | 28.261 | 184 | 122 | 5 | 172 | 355 | 38 | 211 | 7.50e-16 | 77.0 |
| Msa1268600 | MtrunA17_Chr8g0373221 | 57.143 | 56 | 23 | 1 | 20 | 75 | 41 | 95 | 2.43e-15 | 72.4 |
| Msa1268600 | MtrunA17_Chr5g0421841 | 26.961 | 204 | 135 | 4 | 32 | 226 | 5 | 203 | 3.91e-15 | 74.7 |
| Msa1268600 | MtrunA17_Chr7g0234461 | 38.542 | 96 | 59 | 0 | 69 | 164 | 1 | 96 | 5.68e-15 | 70.9 |
| Msa1268600 | MtrunA17_Chr3g0093401 | 28.966 | 145 | 101 | 1 | 31 | 173 | 4 | 148 | 2.55e-14 | 72.8 |
| Msa1268600 | MtrunA17_Chr4g0026601 | 30.573 | 157 | 100 | 3 | 47 | 201 | 33 | 182 | 2.65e-14 | 71.6 |
| Msa1268600 | MtrunA17_Chr6g0469931 | 23.913 | 230 | 160 | 6 | 43 | 265 | 18 | 239 | 3.22e-11 | 66.2 |
| Msa1268600 | MtrunA17_Chr5g0421741 | 27.692 | 130 | 92 | 1 | 28 | 155 | 1 | 130 | 6.38e-11 | 61.6 |
| Msa1268600 | MtrunA17_Chr1g0148711 | 27.692 | 130 | 92 | 1 | 28 | 155 | 1 | 130 | 6.38e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1268600 | AT2G05642.1 | 23.797 | 395 | 226 | 12 | 47 | 410 | 20 | 370 | 3.36e-18 | 88.2 |
| Msa1268600 | AT1G52950.1 | 21.939 | 392 | 267 | 11 | 31 | 401 | 6 | 379 | 3.24e-16 | 82.0 |
Find 128 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATACAATGCTTAACTTTA+AGG | 0.095342 | 8_3:+1664149 | Msa1268600:CDS |
| CCTTTCAGACTTGCAGTTTC+AGG | 0.106605 | 8_3:+1664210 | Msa1268600:CDS |
| TCCTGAAATTGCTGAGTTTA+AGG | 0.120673 | 8_3:+1664890 | Msa1268600:CDS |
| ATCTTCCTGGGAGTTTCTTT+TGG | 0.165757 | 8_3:-1666636 | None:intergenic |
| GCCTTAAACTCAGCAATTTC+AGG | 0.216851 | 8_3:-1664891 | None:intergenic |
| AGAACAATGAAAATTGTTTC+AGG | 0.231352 | 8_3:-1664663 | None:intergenic |
| TAAAGACTTTGGAGAGATTC+TGG | 0.250427 | 8_3:+1664290 | Msa1268600:CDS |
| ATCTTATGATTGTCCCCTTC+TGG | 0.254095 | 8_3:-1664455 | None:intergenic |
| CATTATTATGTTTAGGTATA+GGG | 0.260474 | 8_3:+1665904 | Msa1268600:intron |
| AGGTGGTCTGATTAGTTCTT+TGG | 0.261895 | 8_3:-1666740 | None:intergenic |
| AAGATCAATGCCAACAAATA+TGG | 0.270148 | 8_3:+1665253 | Msa1268600:CDS |
| TGGCTCCAACTTGGGTTGTT+TGG | 0.270885 | 8_3:-1666720 | None:intergenic |
| ATGGATCTTTGGTGTGTTAC+TGG | 0.282388 | 8_3:+1663919 | Msa1268600:CDS |
| AGTTGTGTGCCCAAAGAATA+AGG | 0.284516 | 8_3:+1666159 | Msa1268600:CDS |
| CTGTGAGGGTCATGGATCTT+TGG | 0.306298 | 8_3:+1663908 | Msa1268600:CDS |
| GGTTTAAATTAGTAATATCT+TGG | 0.328442 | 8_3:-1664434 | None:intergenic |
| CACACAACTTGATCCAGAAT+TGG | 0.335002 | 8_3:-1666145 | None:intergenic |
| TCTTTCAGATTTAAAGACTT+TGG | 0.368798 | 8_3:+1664279 | Msa1268600:CDS |
| CGTCTGAGGAAGTTGCTAAA+TGG | 0.370508 | 8_3:+1664100 | Msa1268600:CDS |
| ACAAGGGGATATCATGTCTA+AGG | 0.370564 | 8_3:+1665072 | Msa1268600:CDS |
| AGCAAGACTCCAAACATCTT+TGG | 0.373079 | 8_3:-1663887 | None:intergenic |
| CAATACCTGGTCTGGAACTA+AGG | 0.378876 | 8_3:+1664848 | Msa1268600:CDS |
| AATGATTCATGCCACACTTT+GGG | 0.379707 | 8_3:+1664593 | Msa1268600:CDS |
| CAAGCTTAGTTGAAGAAAGT+TGG | 0.383832 | 8_3:-1666697 | None:intergenic |
| GTTGAGTTATCTGAGATCCT+TGG | 0.390647 | 8_3:-1665051 | None:intergenic |
| ACACAACTTGATCCAGAATT+GGG | 0.394412 | 8_3:-1666144 | None:intergenic |
| CAACCCAATCAACATCTTCC+TGG | 0.399297 | 8_3:-1666649 | None:intergenic |
| CAGGAAGATGTTGATTGGGT+TGG | 0.399704 | 8_3:+1666650 | Msa1268600:CDS |
| TTCAAAATCAAAGCTTGTCC+TGG | 0.402552 | 8_3:+1666184 | Msa1268600:CDS |
| AAGAAATTCTGAAGGAGAAC+AGG | 0.404484 | 8_3:+1664124 | Msa1268600:CDS |
| TTGAGTTATCTGAGATCCTT+GGG | 0.405606 | 8_3:-1665050 | None:intergenic |
| TAGTTCTTTGGCTCCAACTT+GGG | 0.418318 | 8_3:-1666728 | None:intergenic |
| AAAATCAACTGGTGTGATAA+TGG | 0.421011 | 8_3:-1664238 | None:intergenic |
| TAATGATTCATGCCACACTT+TGG | 0.422861 | 8_3:+1664592 | Msa1268600:CDS |
| GGGTAAGTTGTGACAATTGT+TGG | 0.422919 | 8_3:-1665030 | None:intergenic |
| ACTCCCAGGAAGATGTTGAT+TGG | 0.425963 | 8_3:+1666645 | Msa1268600:CDS |
| GCTGAAAGAACAATTGGTTC+AGG | 0.430719 | 8_3:+1666018 | Msa1268600:CDS |
| CTCCCAGGAAGATGTTGATT+GGG | 0.438370 | 8_3:+1666646 | Msa1268600:CDS |
| CTTAGTTCCAGACCAGGTAT+TGG | 0.438836 | 8_3:-1664847 | None:intergenic |
| CTTGCATTGACATCATCAAT+TGG | 0.439409 | 8_3:-1665007 | None:intergenic |
| TGTGTTACCAATACCTGGTC+TGG | 0.440026 | 8_3:+1664840 | Msa1268600:CDS |
| CGAGGAGCTGAAAGAACAAT+TGG | 0.443502 | 8_3:+1666012 | Msa1268600:CDS |
| AAGCTTAGTTGAAGAAAGTT+GGG | 0.445023 | 8_3:-1666696 | None:intergenic |
| TGAATGACTCCAAAGATGTT+TGG | 0.448015 | 8_3:+1663878 | Msa1268600:CDS |
| TAAATCTGAAAGAGGCTAAA+GGG | 0.448445 | 8_3:-1664269 | None:intergenic |
| ATAGATCCATCCATATTTGT+TGG | 0.453507 | 8_3:-1665263 | None:intergenic |
| CCCTTGTTCATCCTAACAGT+GGG | 0.454640 | 8_3:-1663811 | None:intergenic |
| CTTTGTGTGTTACCAATACC+TGG | 0.454911 | 8_3:+1664835 | Msa1268600:CDS |
| TCTTACATGCATCACATGAT+TGG | 0.460659 | 8_3:-1665119 | None:intergenic |
| GGAGATGGTGATTGCTGATA+AGG | 0.464362 | 8_3:+1663966 | Msa1268600:CDS |
| TGCCCTTCTTGATGAGGTGA+AGG | 0.464872 | 8_3:+1666385 | Msa1268600:CDS |
| AGGATCAGTTTCACCACAAA+GGG | 0.465305 | 8_3:-1666588 | None:intergenic |
| AAGAAGGGCAAGCTTTGAAC+TGG | 0.466656 | 8_3:-1666372 | None:intergenic |
| TTAGTTCTTTGGCTCCAACT+TGG | 0.469123 | 8_3:-1666729 | None:intergenic |
| ATCTATGTAAGCCCACTGTT+AGG | 0.473351 | 8_3:+1663800 | Msa1268600:CDS |
| TTCAGCAATAGTTACACAAA+TGG | 0.476623 | 8_3:-1665224 | None:intergenic |
| CCTCAGACGGAACAGTCAGC+TGG | 0.487210 | 8_3:-1664086 | None:intergenic |
| GAGTCTTGCTGTGAGGGTCA+TGG | 0.489172 | 8_3:+1663900 | Msa1268600:CDS |
| TTAAATCTGAAAGAGGCTAA+AGG | 0.489515 | 8_3:-1664270 | None:intergenic |
| CTGATTTGAATAACAGAATA+CGG | 0.489798 | 8_3:-1666214 | None:intergenic |
| GACTTTGGAGAGATTCTGGC+TGG | 0.492370 | 8_3:+1664294 | Msa1268600:CDS |
| AGGTGGGGTTGCAGAACTGC+AGG | 0.493318 | 8_3:-1666612 | None:intergenic |
| ATTCAAATCAGTGACAATGA+AGG | 0.496975 | 8_3:+1666226 | Msa1268600:CDS |
| TATGTTTAGGTATAGGGTTG+AGG | 0.503694 | 8_3:+1665910 | Msa1268600:intron |
| TGAGGTTGAAGCTGTTTACA+AGG | 0.504777 | 8_3:+1665928 | Msa1268600:CDS |
| GGGATGGCAGGAAAATCAAC+TGG | 0.507186 | 8_3:-1664249 | None:intergenic |
| ACATCCTTGACATTGTCATA+AGG | 0.510440 | 8_3:-1663856 | None:intergenic |
| AAAGTGTGGCATGAATCATT+AGG | 0.514708 | 8_3:-1664590 | None:intergenic |
| CAATTGTTCTTTCAGCTCCT+CGG | 0.515105 | 8_3:-1666011 | None:intergenic |
| AAAACAATTTGGATTGGGAG+AGG | 0.522256 | 8_3:+1666267 | Msa1268600:CDS |
| AAAGTCTTTAAATCTGAAAG+AGG | 0.524921 | 8_3:-1664277 | None:intergenic |
| GATTGGTCAGTTTCATCCAA+CGG | 0.526454 | 8_3:+1666114 | Msa1268600:intron |
| GTTCAGACAAGAGCAGCACT+TGG | 0.529770 | 8_3:+1663945 | Msa1268600:CDS |
| TACAGGACTGATCTGCTCAT+AGG | 0.529931 | 8_3:+1664321 | Msa1268600:CDS |
| GGTTTCCTCTACATTTGAGT+TGG | 0.530353 | 8_3:-1665330 | None:intergenic |
| AAATATGGATGGATCTATGA+TGG | 0.530463 | 8_3:+1665268 | Msa1268600:CDS |
| GCTTGCCAAACAACCCAAGT+TGG | 0.531512 | 8_3:+1666715 | Msa1268600:CDS |
| AAAGCTTGCCCTTCTTGATG+AGG | 0.535128 | 8_3:+1666379 | Msa1268600:CDS |
| AAAGAGGCTAAAGGGATGGC+AGG | 0.536094 | 8_3:-1664261 | None:intergenic |
| GTGTGCTTACCAGATGTCAT+TGG | 0.536468 | 8_3:+1664405 | Msa1268600:intron |
| TTCAAATCAGTGACAATGAA+GGG | 0.538012 | 8_3:+1666227 | Msa1268600:CDS |
| AGATTCTGGCTGGAAACTAC+AGG | 0.541117 | 8_3:+1664304 | Msa1268600:CDS |
| ACAGAATACGGACTTGATCC+AGG | 0.542102 | 8_3:-1666202 | None:intergenic |
| TCCCTTGTTCATCCTAACAG+TGG | 0.543232 | 8_3:-1663812 | None:intergenic |
| TTGTACTAAGGGTGTGAGGA+TGG | 0.546435 | 8_3:+1665300 | Msa1268600:CDS |
| TATTACTAATTTAAACCAGA+AGG | 0.547321 | 8_3:+1664440 | Msa1268600:CDS |
| CCTGAAACTGCAAGTCTGAA+AGG | 0.548677 | 8_3:-1664210 | None:intergenic |
| CAACCTTCACCTCATCAAGA+AGG | 0.551347 | 8_3:-1666388 | None:intergenic |
| ATTACTAATTTAAACCAGAA+GGG | 0.551534 | 8_3:+1664441 | Msa1268600:CDS |
| CATTTAGCAACTTCCTCAGA+CGG | 0.553347 | 8_3:-1664099 | None:intergenic |
| TGTTTGGAGTCTTGCTGTGA+GGG | 0.555113 | 8_3:+1663894 | Msa1268600:CDS |
| CATTGTTCTCAAGCATGTGA+GGG | 0.556192 | 8_3:+1664677 | Msa1268600:CDS |
| AACCCAATCAACATCTTCCT+GGG | 0.565243 | 8_3:-1666648 | None:intergenic |
| TCATTGTTCTCAAGCATGTG+AGG | 0.565651 | 8_3:+1664676 | Msa1268600:CDS |
| ACCTCCCAAAAGAAACTCCC+AGG | 0.566692 | 8_3:+1666631 | Msa1268600:CDS |
| ATTGTGCAGCAATCCCTTTG+TGG | 0.572427 | 8_3:+1666575 | Msa1268600:intron |
| TTACTAATTTAAACCAGAAG+GGG | 0.575332 | 8_3:+1664442 | Msa1268600:CDS |
| TCAATGCCAACAAATATGGA+TGG | 0.576743 | 8_3:+1665257 | Msa1268600:CDS |
| ACAAGAGCAGCACTTGGAGA+TGG | 0.580803 | 8_3:+1663951 | Msa1268600:CDS |
| CAAGCATGTGAGGGTTAGAG+AGG | 0.591398 | 8_3:+1664686 | Msa1268600:CDS |
| AAGGATCAGTTTCACCACAA+AGG | 0.600120 | 8_3:-1666589 | None:intergenic |
| AACCTTCACCTCATCAAGAA+GGG | 0.600131 | 8_3:-1666387 | None:intergenic |
| TCTGAAAGAGGCTAAAGGGA+TGG | 0.601963 | 8_3:-1664265 | None:intergenic |
| TGCAAAATCATCCCAAAGTG+TGG | 0.604134 | 8_3:-1664604 | None:intergenic |
| AATGATGTTGCATCCATCGT+AGG | 0.607267 | 8_3:+1665980 | Msa1268600:CDS |
| CTCGGCAGACATTCCTACGA+TGG | 0.608408 | 8_3:-1665993 | None:intergenic |
| ATCTCAGATAACTCAACAAG+GGG | 0.609389 | 8_3:+1665057 | Msa1268600:CDS |
| CACAACTTGATCCAGAATTG+GGG | 0.613833 | 8_3:-1666143 | None:intergenic |
| GGATCTCAGATAACTCAACA+AGG | 0.636734 | 8_3:+1665055 | Msa1268600:CDS |
| AAATTGCTGAGTTTAAGGCT+AGG | 0.637045 | 8_3:+1664895 | Msa1268600:CDS |
| TAAATGGAAAGAAATTCTGA+AGG | 0.637577 | 8_3:+1664116 | Msa1268600:CDS |
| TATGACCTTAGTTCCAGACC+AGG | 0.637924 | 8_3:-1664853 | None:intergenic |
| AATGGCCAACTCAAATGTAG+AGG | 0.644356 | 8_3:+1665325 | Msa1268600:CDS |
| GATCTCAGATAACTCAACAA+GGG | 0.646120 | 8_3:+1665056 | Msa1268600:CDS |
| GCCCACTGTTAGGATGAACA+AGG | 0.648941 | 8_3:+1663810 | Msa1268600:CDS |
| TCGTCCTTATGACAATGTCA+AGG | 0.652415 | 8_3:+1663852 | Msa1268600:CDS |
| CAGGTATTGGTAACACACAA+AGG | 0.655910 | 8_3:-1664834 | None:intergenic |
| TGGTTCTACACAAGATGTCG+AGG | 0.657432 | 8_3:+1666670 | Msa1268600:CDS |
| GATGGTGATTGCTGATAAGG+AGG | 0.660226 | 8_3:+1663969 | Msa1268600:CDS |
| GGGGTTGCAGAACTGCAGGA+AGG | 0.667416 | 8_3:-1666608 | None:intergenic |
| CCCACTGTTAGGATGAACAA+GGG | 0.674630 | 8_3:+1663811 | Msa1268600:CDS |
| AAGGGTGTGAGGATGGACAA+TGG | 0.675698 | 8_3:+1665307 | Msa1268600:CDS |
| CATCGTAGGAATGTCTGCCG+AGG | 0.677090 | 8_3:+1665994 | Msa1268600:CDS |
| CAATTGTCACAACTTACCCA+AGG | 0.678179 | 8_3:+1665034 | Msa1268600:CDS |
| ATGTTTGGAGTCTTGCTGTG+AGG | 0.688417 | 8_3:+1663893 | Msa1268600:CDS |
| TTAATGATGAAGCAAAACCC+AGG | 0.703439 | 8_3:+1665356 | Msa1268600:CDS |
| GTGAGGGTTAGAGAGGCACA+AGG | 0.733223 | 8_3:+1664693 | Msa1268600:CDS |
| ACAACTTGATCCAGAATTGG+GGG | 0.737840 | 8_3:-1666142 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCTATAAAATATATTGTTA+GGG | - | chr8_3:1664940-1664959 | None:intergenic | 10.0% |
| !!! | ATTTTTATCTAACTTTAATA+TGG | + | chr8_3:1665835-1665854 | Msa1268600:intron | 10.0% |
| !!! | TTTTTATCTAACTTTAATAT+GGG | + | chr8_3:1665836-1665855 | Msa1268600:intron | 10.0% |
| !! | TATCATGTATATAAATATAG+TGG | + | chr8_3:1664567-1664586 | Msa1268600:intron | 15.0% |
| !! | CATTATTACGATTATAATTA+TGG | - | chr8_3:1664779-1664798 | None:intergenic | 15.0% |
| !! | GTTCTATAAAATATATTGTT+AGG | - | chr8_3:1664941-1664960 | None:intergenic | 15.0% |
| !! | TATTAAAAACATAGTAACAA+TGG | - | chr8_3:1664963-1664982 | None:intergenic | 15.0% |
| !! | ATGTTTATAAATTCATAGAT+TGG | + | chr8_3:1666097-1666116 | Msa1268600:intron | 15.0% |
| !!! | ATAATTTGAGTATTTTATGT+AGG | - | chr8_3:1666527-1666546 | None:intergenic | 15.0% |
| !! | TTATACAATGCTTAACTTTA+AGG | + | chr8_3:1664149-1664168 | Msa1268600:CDS | 20.0% |
| !! | GGTTTAAATTAGTAATATCT+TGG | - | chr8_3:1664437-1664456 | None:intergenic | 20.0% |
| !! | TATTACTAATTTAAACCAGA+AGG | + | chr8_3:1664440-1664459 | Msa1268600:CDS | 20.0% |
| !! | ATTACTAATTTAAACCAGAA+GGG | + | chr8_3:1664441-1664460 | Msa1268600:CDS | 20.0% |
| !! | GTTAGTATATACTTAGAATA+TGG | - | chr8_3:1664538-1664557 | None:intergenic | 20.0% |
| !! | GCATAACAATAAATAGATAA+AGG | - | chr8_3:1664732-1664751 | None:intergenic | 20.0% |
| !! | TATCTATTTATTGTTATGCA+AGG | + | chr8_3:1664733-1664752 | Msa1268600:intron | 20.0% |
| !!! | TAGTGATAATTGTTGATAAT+AGG | - | chr8_3:1665152-1665171 | None:intergenic | 20.0% |
| !! | AATGAAACTTATAGACTTAT+GGG | - | chr8_3:1665770-1665789 | None:intergenic | 20.0% |
| !! | AAATGAAACTTATAGACTTA+TGG | - | chr8_3:1665771-1665790 | None:intergenic | 20.0% |
| !!! | CATAATAATGCTCATATTTT+AGG | - | chr8_3:1665894-1665913 | None:intergenic | 20.0% |
| !! | ATATGAGCATTATTATGTTT+AGG | + | chr8_3:1665897-1665916 | Msa1268600:intron | 20.0% |
| !! | CATTATTATGTTTAGGTATA+GGG | + | chr8_3:1665904-1665923 | Msa1268600:intron | 20.0% |
| !! | AACACTATATTTAGAAGTAA+TGG | - | chr8_3:1666054-1666073 | None:intergenic | 20.0% |
| !! | ATTACTTCTAAATATAGTGT+TGG | + | chr8_3:1666053-1666072 | Msa1268600:intron | 20.0% |
| !! | ATTAGACACATATCTAAAAA+GGG | - | chr8_3:1666079-1666098 | None:intergenic | 20.0% |
| !!! | TTTTGAAAACCTTATTCTTT+GGG | - | chr8_3:1666171-1666190 | None:intergenic | 20.0% |
| !!! | ATTTTGAAAACCTTATTCTT+TGG | - | chr8_3:1666172-1666191 | None:intergenic | 20.0% |
| !! | AAAAACCTTGAAAAACAATT+TGG | + | chr8_3:1666256-1666275 | Msa1268600:CDS | 20.0% |
| ! | TAAATGGAAAGAAATTCTGA+AGG | + | chr8_3:1664116-1664135 | Msa1268600:CDS | 25.0% |
| ! | AAAGTCTTTAAATCTGAAAG+AGG | - | chr8_3:1664280-1664299 | None:intergenic | 25.0% |
| ! | TCTTTCAGATTTAAAGACTT+TGG | + | chr8_3:1664279-1664298 | Msa1268600:CDS | 25.0% |
| ! | TTACTAATTTAAACCAGAAG+GGG | + | chr8_3:1664442-1664461 | Msa1268600:CDS | 25.0% |
| ! | AGAACAATGAAAATTGTTTC+AGG | - | chr8_3:1664666-1664685 | None:intergenic | 25.0% |
| !! | GAACTATTGTATAACTGTTT+TGG | + | chr8_3:1665178-1665197 | Msa1268600:intron | 25.0% |
| ! | TGGTTATTGTTGTATGTTTA+AGG | + | chr8_3:1665198-1665217 | Msa1268600:intron | 25.0% |
| !! | ATTTGATTAAGGGTGTATAA+TGG | + | chr8_3:1665430-1665449 | Msa1268600:intron | 25.0% |
| ! | AGATAAACCATGTATAAAGA+GGG | - | chr8_3:1665592-1665611 | None:intergenic | 25.0% |
| !!! | TTTCTGGTTTTCTGTTTTTA+GGG | + | chr8_3:1665628-1665647 | Msa1268600:intron | 25.0% |
| ! | ATGAAACTTATAGACTTATG+GGG | - | chr8_3:1665769-1665788 | None:intergenic | 25.0% |
| ! | ATCGAATAATATTGAATCTG+AGG | - | chr8_3:1665795-1665814 | None:intergenic | 25.0% |
| ! | CAGATTCAATATTATTCGAT+CGG | + | chr8_3:1665795-1665814 | Msa1268600:intron | 25.0% |
| ! | GCATTATTATGTTTAGGTAT+AGG | + | chr8_3:1665903-1665922 | Msa1268600:intron | 25.0% |
| !! | ACAAAGCAAAGTTTTTGTTA+TGG | + | chr8_3:1665954-1665973 | Msa1268600:CDS | 25.0% |
| !!! | CAAAGCAAAGTTTTTGTTAT+GGG | + | chr8_3:1665955-1665974 | Msa1268600:CDS | 25.0% |
| ! | CATTAGACACATATCTAAAA+AGG | - | chr8_3:1666080-1666099 | None:intergenic | 25.0% |
| !! | CTGATTTGAATAACAGAATA+CGG | - | chr8_3:1666217-1666236 | None:intergenic | 25.0% |
| ! | CTTGAAAAACAATTTGGATT+GGG | + | chr8_3:1666262-1666281 | Msa1268600:CDS | 25.0% |
| ! | AAATTTCCATCAATGATTGT+AGG | + | chr8_3:1666349-1666368 | Msa1268600:intron | 25.0% |
| GAATGATTCAAGATTAAGAG+AGG | + | chr8_3:1664042-1664061 | Msa1268600:intron | 30.0% | |
| AAAATCAACTGGTGTGATAA+TGG | - | chr8_3:1664241-1664260 | None:intergenic | 30.0% | |
| TAAATCTGAAAGAGGCTAAA+GGG | - | chr8_3:1664272-1664291 | None:intergenic | 30.0% | |
| TTAAATCTGAAAGAGGCTAA+AGG | - | chr8_3:1664273-1664292 | None:intergenic | 30.0% | |
| !!! | ATCAGTCACTTTTCTTCTTA+AGG | + | chr8_3:1664476-1664495 | Msa1268600:CDS | 30.0% |
| !!! | ATTCTTTGCTGCTTTTAATC+AGG | + | chr8_3:1664632-1664651 | Msa1268600:CDS | 30.0% |
| ACAAAGGATAAATACCTAAC+AGG | - | chr8_3:1664821-1664840 | None:intergenic | 30.0% | |
| TTCAGCAATAGTTACACAAA+TGG | - | chr8_3:1665227-1665246 | None:intergenic | 30.0% | |
| AAGATCAATGCCAACAAATA+TGG | + | chr8_3:1665253-1665272 | Msa1268600:CDS | 30.0% | |
| ATAGATCCATCCATATTTGT+TGG | - | chr8_3:1665266-1665285 | None:intergenic | 30.0% | |
| AAATATGGATGGATCTATGA+TGG | + | chr8_3:1665268-1665287 | Msa1268600:CDS | 30.0% | |
| ! | TGGATGCAATTTTTGTACTA+AGG | + | chr8_3:1665288-1665307 | Msa1268600:CDS | 30.0% |
| ! | GGATGCAATTTTTGTACTAA+GGG | + | chr8_3:1665289-1665308 | Msa1268600:CDS | 30.0% |
| ! | GTTTTGCTTCATCATTAACA+TGG | - | chr8_3:1665354-1665373 | None:intergenic | 30.0% |
| ! | ATTTGTTAGTATGCATAGAG+AGG | + | chr8_3:1665403-1665422 | Msa1268600:intron | 30.0% |
| TTGTTGTCCTAAGCAAAATA+GGG | - | chr8_3:1665472-1665491 | None:intergenic | 30.0% | |
| TGTAACCATTTAGGAAGATA+GGG | - | chr8_3:1665516-1665535 | None:intergenic | 30.0% | |
| ATGTAACCATTTAGGAAGAT+AGG | - | chr8_3:1665517-1665536 | None:intergenic | 30.0% | |
| CCAAAATCATGTAACCATTT+AGG | - | chr8_3:1665525-1665544 | None:intergenic | 30.0% | |
| ! | CCTAAATGGTTACATGATTT+TGG | + | chr8_3:1665522-1665541 | Msa1268600:intron | 30.0% |
| CAGATAAACCATGTATAAAG+AGG | - | chr8_3:1665593-1665612 | None:intergenic | 30.0% | |
| CTCTTTATACATGGTTTATC+TGG | + | chr8_3:1665591-1665610 | Msa1268600:intron | 30.0% | |
| !! | ATACATGGTTTATCTGGTTT+TGG | + | chr8_3:1665597-1665616 | Msa1268600:intron | 30.0% |
| !!! | GTTTCTGGTTTTCTGTTTTT+AGG | + | chr8_3:1665627-1665646 | Msa1268600:intron | 30.0% |
| TAATATACATCATACCCCTT+TGG | + | chr8_3:1665725-1665744 | Msa1268600:intron | 30.0% | |
| TGAAACTTATAGACTTATGG+GGG | - | chr8_3:1665768-1665787 | None:intergenic | 30.0% | |
| ATTCAAATCAGTGACAATGA+AGG | + | chr8_3:1666226-1666245 | Msa1268600:CDS | 30.0% | |
| TTCAAATCAGTGACAATGAA+GGG | + | chr8_3:1666227-1666246 | Msa1268600:CDS | 30.0% | |
| !! | CCAATCCAAATTGTTTTTCA+AGG | - | chr8_3:1666264-1666283 | None:intergenic | 30.0% |
| CCTTGAAAAACAATTTGGAT+TGG | + | chr8_3:1666261-1666280 | Msa1268600:CDS | 30.0% | |
| ATCATTCAATGGAATACATG+AGG | - | chr8_3:1666557-1666576 | None:intergenic | 30.0% | |
| AAGCTTAGTTGAAGAAAGTT+GGG | - | chr8_3:1666699-1666718 | None:intergenic | 30.0% | |
| ACATCCTTGACATTGTCATA+AGG | - | chr8_3:1663859-1663878 | None:intergenic | 35.0% | |
| TGAATGACTCCAAAGATGTT+TGG | + | chr8_3:1663878-1663897 | Msa1268600:CDS | 35.0% | |
| ! | AAGAAATTCTGAAGGAGAAC+AGG | + | chr8_3:1664124-1664143 | Msa1268600:CDS | 35.0% |
| ! | TAAAGACTTTGGAGAGATTC+TGG | + | chr8_3:1664290-1664309 | Msa1268600:CDS | 35.0% |
| ! | CTTTTCTTCTTAAGGATGCT+AGG | + | chr8_3:1664484-1664503 | Msa1268600:CDS | 35.0% |
| AAAGTGTGGCATGAATCATT+AGG | - | chr8_3:1664593-1664612 | None:intergenic | 35.0% | |
| TAATGATTCATGCCACACTT+TGG | + | chr8_3:1664592-1664611 | Msa1268600:CDS | 35.0% | |
| AATGATTCATGCCACACTTT+GGG | + | chr8_3:1664593-1664612 | Msa1268600:CDS | 35.0% | |
| ! | TGATGTCTATTTTGCCTGTT+AGG | + | chr8_3:1664804-1664823 | Msa1268600:intron | 35.0% |
| TCCTGAAATTGCTGAGTTTA+AGG | + | chr8_3:1664890-1664909 | Msa1268600:CDS | 35.0% | |
| ! | AAATTGCTGAGTTTAAGGCT+AGG | + | chr8_3:1664895-1664914 | Msa1268600:CDS | 35.0% |
| ! | CTTGCATTGACATCATCAAT+TGG | - | chr8_3:1665010-1665029 | None:intergenic | 35.0% |
| ! | TTGAGTTATCTGAGATCCTT+GGG | - | chr8_3:1665053-1665072 | None:intergenic | 35.0% |
| GATCTCAGATAACTCAACAA+GGG | + | chr8_3:1665056-1665075 | Msa1268600:CDS | 35.0% | |
| ATCTCAGATAACTCAACAAG+GGG | + | chr8_3:1665057-1665076 | Msa1268600:CDS | 35.0% | |
| ! | TCATTTTCTCACTCTTTCTG+AGG | + | chr8_3:1665096-1665115 | Msa1268600:CDS | 35.0% |
| TCTTACATGCATCACATGAT+TGG | - | chr8_3:1665122-1665141 | None:intergenic | 35.0% | |
| TCAATGCCAACAAATATGGA+TGG | + | chr8_3:1665257-1665276 | Msa1268600:CDS | 35.0% | |
| !! | ATTTTTGTACTAAGGGTGTG+AGG | + | chr8_3:1665296-1665315 | Msa1268600:CDS | 35.0% |
| TTAATGATGAAGCAAAACCC+AGG | + | chr8_3:1665356-1665375 | Msa1268600:CDS | 35.0% | |
| AATATCAACTCTACCTACCT+GGG | - | chr8_3:1665376-1665395 | None:intergenic | 35.0% | |
| AAATATCAACTCTACCTACC+TGG | - | chr8_3:1665377-1665396 | None:intergenic | 35.0% | |
| AGAGAGGATGCATTTGATTA+AGG | + | chr8_3:1665419-1665438 | Msa1268600:intron | 35.0% | |
| GAGAGGATGCATTTGATTAA+GGG | + | chr8_3:1665420-1665439 | Msa1268600:intron | 35.0% | |
| ! | TAGTCTTCCCTATTTTGCTT+AGG | + | chr8_3:1665462-1665481 | Msa1268600:intron | 35.0% |
| GTTGTTGTCCTAAGCAAAAT+AGG | - | chr8_3:1665473-1665492 | None:intergenic | 35.0% | |
| AAACTTATAGACTTATGGGG+GGG | - | chr8_3:1665766-1665785 | None:intergenic | 35.0% | |
| GAAACTTATAGACTTATGGG+GGG | - | chr8_3:1665767-1665786 | None:intergenic | 35.0% | |
| TATGTTTAGGTATAGGGTTG+AGG | + | chr8_3:1665910-1665929 | Msa1268600:intron | 35.0% | |
| ACACAACTTGATCCAGAATT+GGG | - | chr8_3:1666147-1666166 | None:intergenic | 35.0% | |
| TTCAAAATCAAAGCTTGTCC+TGG | + | chr8_3:1666184-1666203 | Msa1268600:CDS | 35.0% | |
| ! | AAAACAATTTGGATTGGGAG+AGG | + | chr8_3:1666267-1666286 | Msa1268600:CDS | 35.0% |
| ! | GTTGCTAGTTCTTAAACACT+TGG | - | chr8_3:1666505-1666524 | None:intergenic | 35.0% |
| ATTGCTGCACAATCATTCAA+TGG | - | chr8_3:1666568-1666587 | None:intergenic | 35.0% | |
| CAAGCTTAGTTGAAGAAAGT+TGG | - | chr8_3:1666700-1666719 | None:intergenic | 35.0% | |
| ATCTATGTAAGCCCACTGTT+AGG | + | chr8_3:1663800-1663819 | Msa1268600:CDS | 40.0% | |
| TCGTCCTTATGACAATGTCA+AGG | + | chr8_3:1663852-1663871 | Msa1268600:CDS | 40.0% | |
| AGCAAGACTCCAAACATCTT+TGG | - | chr8_3:1663890-1663909 | None:intergenic | 40.0% | |
| ! | ATGGATCTTTGGTGTGTTAC+TGG | + | chr8_3:1663919-1663938 | Msa1268600:CDS | 40.0% |
| CATTTAGCAACTTCCTCAGA+CGG | - | chr8_3:1664102-1664121 | None:intergenic | 40.0% | |
| GGTCTTCAAAAACGATGTTG+TGG | + | chr8_3:1664170-1664189 | Msa1268600:CDS | 40.0% | |
| ATCTTATGATTGTCCCCTTC+TGG | - | chr8_3:1664458-1664477 | None:intergenic | 40.0% | |
| TTCTTCTTAAGGATGCTAGG+TGG | + | chr8_3:1664487-1664506 | Msa1268600:intron | 40.0% | |
| TGCAAAATCATCCCAAAGTG+TGG | - | chr8_3:1664607-1664626 | None:intergenic | 40.0% | |
| !!! | GCTGCTTTTAATCAGGCAAA+TGG | + | chr8_3:1664639-1664658 | Msa1268600:CDS | 40.0% |
| TCATTGTTCTCAAGCATGTG+AGG | + | chr8_3:1664676-1664695 | Msa1268600:CDS | 40.0% | |
| CATTGTTCTCAAGCATGTGA+GGG | + | chr8_3:1664677-1664696 | Msa1268600:CDS | 40.0% | |
| !! | CAGGTATTGGTAACACACAA+AGG | - | chr8_3:1664837-1664856 | None:intergenic | 40.0% |
| CTTTGTGTGTTACCAATACC+TGG | + | chr8_3:1664835-1664854 | Msa1268600:CDS | 40.0% | |
| GCCTTAAACTCAGCAATTTC+AGG | - | chr8_3:1664894-1664913 | None:intergenic | 40.0% | |
| GGGTAAGTTGTGACAATTGT+TGG | - | chr8_3:1665033-1665052 | None:intergenic | 40.0% | |
| CAATTGTCACAACTTACCCA+AGG | + | chr8_3:1665034-1665053 | Msa1268600:CDS | 40.0% | |
| ! | GTTGAGTTATCTGAGATCCT+TGG | - | chr8_3:1665054-1665073 | None:intergenic | 40.0% |
| GGATCTCAGATAACTCAACA+AGG | + | chr8_3:1665055-1665074 | Msa1268600:CDS | 40.0% | |
| ACAAGGGGATATCATGTCTA+AGG | + | chr8_3:1665072-1665091 | Msa1268600:CDS | 40.0% | |
| AATGGCCAACTCAAATGTAG+AGG | + | chr8_3:1665325-1665344 | Msa1268600:CDS | 40.0% | |
| GGTTTCCTCTACATTTGAGT+TGG | - | chr8_3:1665333-1665352 | None:intergenic | 40.0% | |
| TCAGACCCTATCTTCCTAAA+TGG | + | chr8_3:1665508-1665527 | Msa1268600:intron | 40.0% | |
| !!! | GGTTACATGATTTTGGCTAC+TGG | + | chr8_3:1665529-1665548 | Msa1268600:intron | 40.0% |
| TACCAGTCCCTCTTTATACA+TGG | + | chr8_3:1665582-1665601 | Msa1268600:intron | 40.0% | |
| AACCATGTATAAAGAGGGAC+TGG | - | chr8_3:1665587-1665606 | None:intergenic | 40.0% | |
| TTAGGGCTGCAATTTGTGAT+AGG | + | chr8_3:1665645-1665664 | Msa1268600:intron | 40.0% | |
| TACCCCTTTGGTATGTATGT+AGG | + | chr8_3:1665737-1665756 | Msa1268600:intron | 40.0% | |
| GACCTACATACATACCAAAG+GGG | - | chr8_3:1665742-1665761 | None:intergenic | 40.0% | |
| GGACCTACATACATACCAAA+GGG | - | chr8_3:1665743-1665762 | None:intergenic | 40.0% | |
| AACTTATAGACTTATGGGGG+GGG | - | chr8_3:1665765-1665784 | None:intergenic | 40.0% | |
| TGAGGTTGAAGCTGTTTACA+AGG | + | chr8_3:1665928-1665947 | Msa1268600:CDS | 40.0% | |
| AATGATGTTGCATCCATCGT+AGG | + | chr8_3:1665980-1665999 | Msa1268600:CDS | 40.0% | |
| CAATTGTTCTTTCAGCTCCT+CGG | - | chr8_3:1666014-1666033 | None:intergenic | 40.0% | |
| ! | GCTGAAAGAACAATTGGTTC+AGG | + | chr8_3:1666018-1666037 | Msa1268600:CDS | 40.0% |
| ! | GATTGGTCAGTTTCATCCAA+CGG | + | chr8_3:1666114-1666133 | Msa1268600:intron | 40.0% |
| ACAACTTGATCCAGAATTGG+GGG | - | chr8_3:1666145-1666164 | None:intergenic | 40.0% | |
| CACAACTTGATCCAGAATTG+GGG | - | chr8_3:1666146-1666165 | None:intergenic | 40.0% | |
| CACACAACTTGATCCAGAAT+TGG | - | chr8_3:1666148-1666167 | None:intergenic | 40.0% | |
| AGTTGTGTGCCCAAAGAATA+AGG | + | chr8_3:1666159-1666178 | Msa1268600:CDS | 40.0% | |
| ! | AACTGGCCTACAATCATTGA+TGG | - | chr8_3:1666358-1666377 | None:intergenic | 40.0% |
| AACCTTCACCTCATCAAGAA+GGG | - | chr8_3:1666390-1666409 | None:intergenic | 40.0% | |
| AGGATCAGTTTCACCACAAA+GGG | - | chr8_3:1666591-1666610 | None:intergenic | 40.0% | |
| AAGGATCAGTTTCACCACAA+AGG | - | chr8_3:1666592-1666611 | None:intergenic | 40.0% | |
| ! | TCTTCCTGGGAGTTTCTTTT+GGG | - | chr8_3:1666638-1666657 | None:intergenic | 40.0% |
| ! | ATCTTCCTGGGAGTTTCTTT+TGG | - | chr8_3:1666639-1666658 | None:intergenic | 40.0% |
| AACCCAATCAACATCTTCCT+GGG | - | chr8_3:1666651-1666670 | None:intergenic | 40.0% | |
| ! | TAGTTCTTTGGCTCCAACTT+GGG | - | chr8_3:1666731-1666750 | None:intergenic | 40.0% |
| ! | TTAGTTCTTTGGCTCCAACT+TGG | - | chr8_3:1666732-1666751 | None:intergenic | 40.0% |
| CCCTTGTTCATCCTAACAGT+GGG | - | chr8_3:1663814-1663833 | None:intergenic | 45.0% | |
| CCCACTGTTAGGATGAACAA+GGG | + | chr8_3:1663811-1663830 | Msa1268600:CDS | 45.0% | |
| TCCCTTGTTCATCCTAACAG+TGG | - | chr8_3:1663815-1663834 | None:intergenic | 45.0% | |
| ! | ATGTTTGGAGTCTTGCTGTG+AGG | + | chr8_3:1663893-1663912 | Msa1268600:CDS | 45.0% |
| ! | TGTTTGGAGTCTTGCTGTGA+GGG | + | chr8_3:1663894-1663913 | Msa1268600:CDS | 45.0% |
| GGAGATGGTGATTGCTGATA+AGG | + | chr8_3:1663966-1663985 | Msa1268600:CDS | 45.0% | |
| GATGGTGATTGCTGATAAGG+AGG | + | chr8_3:1663969-1663988 | Msa1268600:CDS | 45.0% | |
| CGTCTGAGGAAGTTGCTAAA+TGG | + | chr8_3:1664100-1664119 | Msa1268600:CDS | 45.0% | |
| CCTGAAACTGCAAGTCTGAA+AGG | - | chr8_3:1664213-1664232 | None:intergenic | 45.0% | |
| CCTTTCAGACTTGCAGTTTC+AGG | + | chr8_3:1664210-1664229 | Msa1268600:CDS | 45.0% | |
| TCTGAAAGAGGCTAAAGGGA+TGG | - | chr8_3:1664268-1664287 | None:intergenic | 45.0% | |
| ! | AGATTCTGGCTGGAAACTAC+AGG | + | chr8_3:1664304-1664323 | Msa1268600:CDS | 45.0% |
| TACAGGACTGATCTGCTCAT+AGG | + | chr8_3:1664321-1664340 | Msa1268600:CDS | 45.0% | |
| GTGTGCTTACCAGATGTCAT+TGG | + | chr8_3:1664405-1664424 | Msa1268600:intron | 45.0% | |
| TGGAAAGCTCCAATGACATC+TGG | - | chr8_3:1664417-1664436 | None:intergenic | 45.0% | |
| TGTGTTACCAATACCTGGTC+TGG | + | chr8_3:1664840-1664859 | Msa1268600:CDS | 45.0% | |
| CTTAGTTCCAGACCAGGTAT+TGG | - | chr8_3:1664850-1664869 | None:intergenic | 45.0% | |
| ! | CAATACCTGGTCTGGAACTA+AGG | + | chr8_3:1664848-1664867 | Msa1268600:CDS | 45.0% |
| TATGACCTTAGTTCCAGACC+AGG | - | chr8_3:1664856-1664875 | None:intergenic | 45.0% | |
| ! | TTGTACTAAGGGTGTGAGGA+TGG | + | chr8_3:1665300-1665319 | Msa1268600:CDS | 45.0% |
| TGATGAAGCAAAACCCAGGT+AGG | + | chr8_3:1665360-1665379 | Msa1268600:intron | 45.0% | |
| !!! | GGTTTTGGAACTGCAGTTTC+TGG | + | chr8_3:1665612-1665631 | Msa1268600:intron | 45.0% |
| GGGACCTACATACATACCAA+AGG | - | chr8_3:1665744-1665763 | None:intergenic | 45.0% | |
| ACTTATAGACTTATGGGGGG+GGG | - | chr8_3:1665764-1665783 | None:intergenic | 45.0% | |
| CGAGGAGCTGAAAGAACAAT+TGG | + | chr8_3:1666012-1666031 | Msa1268600:CDS | 45.0% | |
| ACAGAATACGGACTTGATCC+AGG | - | chr8_3:1666205-1666224 | None:intergenic | 45.0% | |
| !! | AAGAAGGGCAAGCTTTGAAC+TGG | - | chr8_3:1666375-1666394 | None:intergenic | 45.0% |
| AAAGCTTGCCCTTCTTGATG+AGG | + | chr8_3:1666379-1666398 | Msa1268600:CDS | 45.0% | |
| CAACCTTCACCTCATCAAGA+AGG | - | chr8_3:1666391-1666410 | None:intergenic | 45.0% | |
| ATTGTGCAGCAATCCCTTTG+TGG | + | chr8_3:1666575-1666594 | Msa1268600:intron | 45.0% | |
| ACTCCCAGGAAGATGTTGAT+TGG | + | chr8_3:1666645-1666664 | Msa1268600:CDS | 45.0% | |
| ! | CTCCCAGGAAGATGTTGATT+GGG | + | chr8_3:1666646-1666665 | Msa1268600:CDS | 45.0% |
| CAACCCAATCAACATCTTCC+TGG | - | chr8_3:1666652-1666671 | None:intergenic | 45.0% | |
| ! | CAGGAAGATGTTGATTGGGT+TGG | + | chr8_3:1666650-1666669 | Msa1268600:CDS | 45.0% |
| ! | TGGTTCTACACAAGATGTCG+AGG | + | chr8_3:1666670-1666689 | Msa1268600:CDS | 45.0% |
| !! | TATTTAAATTAATGTATTTA+AGG | - | chr8_3:1664007-1664026 | None:intergenic | 5.0% |
| GCCCACTGTTAGGATGAACA+AGG | + | chr8_3:1663810-1663829 | Msa1268600:CDS | 50.0% | |
| CTGTGAGGGTCATGGATCTT+TGG | + | chr8_3:1663908-1663927 | Msa1268600:CDS | 50.0% | |
| GTTCAGACAAGAGCAGCACT+TGG | + | chr8_3:1663945-1663964 | Msa1268600:CDS | 50.0% | |
| ACAAGAGCAGCACTTGGAGA+TGG | + | chr8_3:1663951-1663970 | Msa1268600:CDS | 50.0% | |
| GGGATGGCAGGAAAATCAAC+TGG | - | chr8_3:1664252-1664271 | None:intergenic | 50.0% | |
| AAAGAGGCTAAAGGGATGGC+AGG | - | chr8_3:1664264-1664283 | None:intergenic | 50.0% | |
| ! | GACTTTGGAGAGATTCTGGC+TGG | + | chr8_3:1664294-1664313 | Msa1268600:CDS | 50.0% |
| CAAGCATGTGAGGGTTAGAG+AGG | + | chr8_3:1664686-1664705 | Msa1268600:CDS | 50.0% | |
| ! | AAGGGTGTGAGGATGGACAA+TGG | + | chr8_3:1665307-1665326 | Msa1268600:CDS | 50.0% |
| AGAATTGGGGGATAAGCCGT+TGG | - | chr8_3:1666133-1666152 | None:intergenic | 50.0% | |
| AACGGCTTATCCCCCAATTC+TGG | + | chr8_3:1666132-1666151 | Msa1268600:CDS | 50.0% | |
| TGCCCTTCTTGATGAGGTGA+AGG | + | chr8_3:1666385-1666404 | Msa1268600:CDS | 50.0% | |
| !! | GGAGTTTCTTTTGGGAGGTG+GGG | - | chr8_3:1666630-1666649 | None:intergenic | 50.0% |
| !! | GGGAGTTTCTTTTGGGAGGT+GGG | - | chr8_3:1666631-1666650 | None:intergenic | 50.0% |
| !! | TGGGAGTTTCTTTTGGGAGG+TGG | - | chr8_3:1666632-1666651 | None:intergenic | 50.0% |
| ACCTCCCAAAAGAAACTCCC+AGG | + | chr8_3:1666631-1666650 | Msa1268600:CDS | 50.0% | |
| ! | TCCTGGGAGTTTCTTTTGGG+AGG | - | chr8_3:1666635-1666654 | None:intergenic | 50.0% |
| GCTTGCCAAACAACCCAAGT+TGG | + | chr8_3:1666715-1666734 | Msa1268600:CDS | 50.0% | |
| ! | TGGCTCCAACTTGGGTTGTT+TGG | - | chr8_3:1666723-1666742 | None:intergenic | 50.0% |
| ! | GAGTCTTGCTGTGAGGGTCA+TGG | + | chr8_3:1663900-1663919 | Msa1268600:CDS | 55.0% |
| ! | GTGAGGGTTAGAGAGGCACA+AGG | + | chr8_3:1664693-1664712 | Msa1268600:CDS | 55.0% |
| CTCGGCAGACATTCCTACGA+TGG | - | chr8_3:1665996-1666015 | None:intergenic | 55.0% | |
| CATCGTAGGAATGTCTGCCG+AGG | + | chr8_3:1665994-1666013 | Msa1268600:CDS | 55.0% | |
| CCTCAGACGGAACAGTCAGC+TGG | - | chr8_3:1664089-1664108 | None:intergenic | 60.0% | |
| CCAGCTGACTGTTCCGTCTG+AGG | + | chr8_3:1664086-1664105 | Msa1268600:CDS | 60.0% | |
| GGGGTTGCAGAACTGCAGGA+AGG | - | chr8_3:1666611-1666630 | None:intergenic | 60.0% | |
| AGGTGGGGTTGCAGAACTGC+AGG | - | chr8_3:1666615-1666634 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 1663766 | 1666751 | 1663766 | ID=Msa1268600;Name=Msa1268600 |
| chr8_3 | mRNA | 1663766 | 1666751 | 1663766 | ID=Msa1268600-mRNA-1;Parent=Msa1268600;Name=Msa1268600-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0|0|1|1|1|11|0|549 |
| chr8_3 | exon | 1663766 | 1663990 | 1663766 | ID=Msa1268600-mRNA-1:exon:461;Parent=Msa1268600-mRNA-1 |
| chr8_3 | exon | 1664075 | 1664342 | 1664075 | ID=Msa1268600-mRNA-1:exon:462;Parent=Msa1268600-mRNA-1 |
| chr8_3 | exon | 1664418 | 1664505 | 1664418 | ID=Msa1268600-mRNA-1:exon:463;Parent=Msa1268600-mRNA-1 |
| chr8_3 | exon | 1664587 | 1664714 | 1664587 | ID=Msa1268600-mRNA-1:exon:464;Parent=Msa1268600-mRNA-1 |
| chr8_3 | exon | 1664826 | 1664916 | 1664826 | ID=Msa1268600-mRNA-1:exon:465;Parent=Msa1268600-mRNA-1 |
| chr8_3 | exon | 1664994 | 1665135 | 1664994 | ID=Msa1268600-mRNA-1:exon:466;Parent=Msa1268600-mRNA-1 |
| chr8_3 | exon | 1665220 | 1665377 | 1665220 | ID=Msa1268600-mRNA-1:exon:467;Parent=Msa1268600-mRNA-1 |
| chr8_3 | exon | 1665919 | 1666039 | 1665919 | ID=Msa1268600-mRNA-1:exon:468;Parent=Msa1268600-mRNA-1 |
| chr8_3 | exon | 1666115 | 1666288 | 1666115 | ID=Msa1268600-mRNA-1:exon:469;Parent=Msa1268600-mRNA-1 |
| chr8_3 | exon | 1666371 | 1666457 | 1666371 | ID=Msa1268600-mRNA-1:exon:470;Parent=Msa1268600-mRNA-1 |
| chr8_3 | exon | 1666584 | 1666751 | 1666584 | ID=Msa1268600-mRNA-1:exon:471;Parent=Msa1268600-mRNA-1 |
| chr8_3 | CDS | 1663766 | 1663990 | 1663766 | ID=Msa1268600-mRNA-1:cds;Parent=Msa1268600-mRNA-1 |
| chr8_3 | CDS | 1664075 | 1664342 | 1664075 | ID=Msa1268600-mRNA-1:cds;Parent=Msa1268600-mRNA-1 |
| chr8_3 | CDS | 1664418 | 1664505 | 1664418 | ID=Msa1268600-mRNA-1:cds;Parent=Msa1268600-mRNA-1 |
| chr8_3 | CDS | 1664587 | 1664714 | 1664587 | ID=Msa1268600-mRNA-1:cds;Parent=Msa1268600-mRNA-1 |
| chr8_3 | CDS | 1664826 | 1664916 | 1664826 | ID=Msa1268600-mRNA-1:cds;Parent=Msa1268600-mRNA-1 |
| chr8_3 | CDS | 1664994 | 1665135 | 1664994 | ID=Msa1268600-mRNA-1:cds;Parent=Msa1268600-mRNA-1 |
| chr8_3 | CDS | 1665220 | 1665377 | 1665220 | ID=Msa1268600-mRNA-1:cds;Parent=Msa1268600-mRNA-1 |
| chr8_3 | CDS | 1665919 | 1666039 | 1665919 | ID=Msa1268600-mRNA-1:cds;Parent=Msa1268600-mRNA-1 |
| chr8_3 | CDS | 1666115 | 1666288 | 1666115 | ID=Msa1268600-mRNA-1:cds;Parent=Msa1268600-mRNA-1 |
| chr8_3 | CDS | 1666371 | 1666457 | 1666371 | ID=Msa1268600-mRNA-1:cds;Parent=Msa1268600-mRNA-1 |
| chr8_3 | CDS | 1666584 | 1666751 | 1666584 | ID=Msa1268600-mRNA-1:cds;Parent=Msa1268600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
