Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1269190 | sp|A6P6V9|CBDAS_CANSA | 40.741 | 513 | 201 | 9 | 30 | 443 | 31 | 539 | 7.52e-125 | 376 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1269190 | G8A1B7 | 74.259 | 540 | 47 | 5 | 1 | 448 | 1 | 540 | 0.0 | 759 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0615190 | Msa1269190 | 0.913056 | 9.576529e-84 | -8.615850e-47 |
| Msa0698180 | Msa1269190 | 0.828512 | 8.629594e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1269190 | MtrunA17_Chr4g0051381 | 74.259 | 540 | 47 | 5 | 1 | 448 | 1 | 540 | 0.0 | 759 |
| Msa1269190 | MtrunA17_Chr4g0051411 | 66.479 | 534 | 87 | 5 | 1 | 442 | 1 | 534 | 0.0 | 674 |
| Msa1269190 | MtrunA17_Chr4g0051421 | 62.385 | 545 | 106 | 8 | 1 | 446 | 1 | 545 | 0.0 | 645 |
| Msa1269190 | MtrunA17_Chr4g0051421 | 60.037 | 538 | 118 | 7 | 7 | 449 | 546 | 1081 | 0.0 | 616 |
| Msa1269190 | MtrunA17_Chr4g0051211 | 54.219 | 474 | 114 | 5 | 69 | 443 | 2 | 471 | 6.91e-175 | 499 |
| Msa1269190 | MtrunA17_Chr4g0051441 | 47.080 | 565 | 174 | 9 | 1 | 443 | 53 | 614 | 2.56e-159 | 464 |
| Msa1269190 | MtrunA17_Chr2g0293121 | 41.210 | 529 | 209 | 8 | 10 | 443 | 2 | 523 | 4.17e-133 | 395 |
| Msa1269190 | MtrunA17_Chr2g0292971 | 39.726 | 511 | 209 | 9 | 30 | 446 | 27 | 532 | 4.59e-127 | 379 |
| Msa1269190 | MtrunA17_Chr2g0293161 | 41.341 | 537 | 215 | 9 | 2 | 443 | 1 | 532 | 4.82e-127 | 379 |
| Msa1269190 | MtrunA17_Chr2g0293191 | 41.121 | 535 | 215 | 9 | 4 | 443 | 34 | 563 | 1.68e-125 | 376 |
| Msa1269190 | MtrunA17_Chr4g0051551 | 40.370 | 540 | 209 | 12 | 1 | 443 | 35 | 558 | 5.74e-124 | 372 |
| Msa1269190 | MtrunA17_Chr4g0051541 | 40.313 | 511 | 200 | 10 | 30 | 443 | 28 | 530 | 5.84e-123 | 368 |
| Msa1269190 | MtrunA17_Chr2g0292991 | 40.347 | 518 | 204 | 11 | 18 | 443 | 23 | 527 | 1.04e-117 | 354 |
| Msa1269190 | MtrunA17_Chr3g0079791 | 39.089 | 527 | 219 | 10 | 11 | 443 | 4 | 522 | 5.73e-117 | 352 |
| Msa1269190 | MtrunA17_Chr3g0079801 | 38.491 | 530 | 218 | 10 | 11 | 443 | 4 | 522 | 9.83e-117 | 352 |
| Msa1269190 | MtrunA17_Chr3g0079831 | 40.265 | 529 | 220 | 11 | 5 | 443 | 14 | 536 | 4.27e-116 | 351 |
| Msa1269190 | MtrunA17_Chr2g0293021 | 39.453 | 512 | 212 | 10 | 30 | 451 | 30 | 533 | 7.72e-116 | 350 |
| Msa1269190 | MtrunA17_Chr2g0293031 | 38.632 | 541 | 224 | 12 | 3 | 443 | 6 | 538 | 2.65e-115 | 348 |
| Msa1269190 | MtrunA17_Chr2g0293041 | 38.933 | 506 | 209 | 9 | 33 | 443 | 40 | 540 | 8.43e-111 | 337 |
| Msa1269190 | MtrunA17_Chr6g0457061 | 38.095 | 525 | 223 | 9 | 11 | 442 | 10 | 525 | 7.00e-108 | 330 |
| Msa1269190 | MtrunA17_Chr6g0457031 | 37.905 | 525 | 224 | 9 | 11 | 442 | 10 | 525 | 2.81e-107 | 328 |
| Msa1269190 | MtrunA17_Chr4g0051531 | 38.722 | 532 | 218 | 11 | 10 | 443 | 631 | 1152 | 3.28e-107 | 343 |
| Msa1269190 | MtrunA17_Chr4g0051531 | 38.614 | 505 | 212 | 7 | 32 | 442 | 39 | 539 | 6.69e-104 | 334 |
| Msa1269190 | MtrunA17_Chr4g0048311 | 39.328 | 506 | 212 | 10 | 31 | 443 | 37 | 540 | 2.01e-106 | 326 |
| Msa1269190 | MtrunA17_Chr4g0048361 | 37.736 | 530 | 225 | 11 | 6 | 442 | 8 | 525 | 4.53e-106 | 325 |
| Msa1269190 | MtrunA17_Chr4g0046581 | 37.870 | 507 | 215 | 8 | 31 | 442 | 31 | 532 | 5.89e-106 | 325 |
| Msa1269190 | MtrunA17_Chr4g0028611 | 37.547 | 530 | 234 | 10 | 1 | 442 | 30 | 550 | 1.34e-105 | 324 |
| Msa1269190 | MtrunA17_Chr4g0048351 | 35.795 | 528 | 245 | 10 | 6 | 444 | 20 | 542 | 8.21e-104 | 319 |
| Msa1269190 | MtrunA17_Chr2g0288611 | 37.013 | 462 | 204 | 11 | 68 | 442 | 4 | 465 | 4.00e-85 | 269 |
| Msa1269190 | MtrunA17_Chr1g0188271 | 32.252 | 524 | 246 | 13 | 32 | 453 | 31 | 547 | 1.25e-79 | 256 |
| Msa1269190 | MtrunA17_Chr4g0048331 | 34.772 | 394 | 180 | 6 | 124 | 442 | 1 | 392 | 4.76e-69 | 224 |
| Msa1269190 | MtrunA17_Chr3g0079821 | 48.230 | 226 | 77 | 3 | 256 | 443 | 5 | 228 | 5.42e-65 | 209 |
| Msa1269190 | MtrunA17_Chr2g0320381 | 50.794 | 63 | 31 | 0 | 156 | 218 | 58 | 120 | 5.83e-14 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1269190 | AT5G44400.1 | 37.338 | 541 | 231 | 12 | 3 | 444 | 6 | 537 | 4.20e-117 | 353 |
| Msa1269190 | AT5G44410.1 | 38.505 | 535 | 217 | 13 | 4 | 441 | 8 | 527 | 1.34e-116 | 352 |
| Msa1269190 | AT5G44440.1 | 38.241 | 523 | 231 | 10 | 8 | 441 | 8 | 527 | 5.20e-116 | 350 |
| Msa1269190 | AT2G34790.1 | 35.460 | 533 | 231 | 12 | 9 | 442 | 11 | 529 | 1.06e-115 | 350 |
| Msa1269190 | AT5G44390.1 | 36.364 | 539 | 241 | 10 | 3 | 443 | 6 | 540 | 2.08e-115 | 349 |
| Msa1269190 | AT5G44440.2 | 38.050 | 523 | 232 | 10 | 8 | 441 | 78 | 597 | 7.49e-115 | 350 |
| Msa1269190 | AT4G20820.1 | 37.383 | 535 | 229 | 9 | 2 | 441 | 1 | 524 | 9.86e-111 | 337 |
| Msa1269190 | AT1G30760.2 | 35.798 | 514 | 219 | 11 | 28 | 442 | 48 | 549 | 9.89e-107 | 327 |
| Msa1269190 | AT1G30760.1 | 35.798 | 514 | 219 | 11 | 28 | 442 | 30 | 531 | 1.23e-106 | 327 |
| Msa1269190 | AT5G44380.1 | 35.807 | 539 | 243 | 11 | 3 | 443 | 6 | 539 | 1.41e-105 | 324 |
| Msa1269190 | AT1G30700.1 | 36.604 | 530 | 236 | 10 | 8 | 443 | 3 | 526 | 1.57e-105 | 323 |
| Msa1269190 | AT5G44380.2 | 35.807 | 539 | 243 | 11 | 3 | 443 | 46 | 579 | 5.06e-105 | 324 |
| Msa1269190 | AT5G44360.1 | 36.314 | 548 | 230 | 14 | 1 | 445 | 1 | 532 | 1.85e-102 | 316 |
| Msa1269190 | AT5G44360.2 | 36.380 | 547 | 229 | 14 | 1 | 444 | 17 | 547 | 3.06e-102 | 316 |
| Msa1269190 | AT4G20860.1 | 38.550 | 524 | 207 | 16 | 22 | 443 | 19 | 529 | 1.11e-100 | 311 |
| Msa1269190 | AT4G20830.2 | 37.154 | 506 | 217 | 11 | 32 | 443 | 38 | 536 | 9.60e-100 | 309 |
| Msa1269190 | AT4G20840.1 | 35.897 | 507 | 226 | 10 | 31 | 444 | 36 | 536 | 1.26e-99 | 308 |
| Msa1269190 | AT4G20830.1 | 37.154 | 506 | 217 | 11 | 32 | 443 | 38 | 536 | 2.07e-99 | 309 |
| Msa1269190 | AT1G30730.1 | 34.659 | 528 | 244 | 11 | 6 | 441 | 5 | 523 | 6.38e-98 | 304 |
| Msa1269190 | AT1G11770.1 | 34.766 | 535 | 248 | 13 | 4 | 443 | 1 | 529 | 1.33e-97 | 303 |
| Msa1269190 | AT1G30710.1 | 32.959 | 534 | 246 | 9 | 9 | 443 | 8 | 528 | 1.66e-97 | 303 |
| Msa1269190 | AT1G30740.2 | 34.522 | 533 | 248 | 12 | 10 | 447 | 9 | 535 | 8.54e-97 | 301 |
| Msa1269190 | AT1G30740.1 | 34.334 | 533 | 249 | 12 | 10 | 447 | 6 | 532 | 1.17e-96 | 301 |
| Msa1269190 | AT1G34575.1 | 33.459 | 532 | 240 | 10 | 6 | 441 | 9 | 522 | 6.79e-95 | 296 |
| Msa1269190 | AT1G26380.1 | 33.889 | 540 | 246 | 15 | 11 | 451 | 8 | 535 | 2.10e-94 | 295 |
| Msa1269190 | AT1G01980.1 | 33.769 | 536 | 250 | 16 | 6 | 443 | 6 | 534 | 1.54e-92 | 290 |
| Msa1269190 | AT1G26420.1 | 33.396 | 530 | 250 | 14 | 8 | 443 | 5 | 525 | 3.12e-92 | 289 |
| Msa1269190 | AT1G26390.1 | 34.185 | 509 | 226 | 11 | 27 | 443 | 36 | 527 | 1.24e-91 | 288 |
| Msa1269190 | AT1G26410.1 | 35.547 | 512 | 228 | 15 | 26 | 443 | 46 | 549 | 1.63e-91 | 288 |
| Msa1269190 | AT1G30720.1 | 35.329 | 501 | 227 | 12 | 33 | 441 | 29 | 524 | 2.05e-91 | 287 |
| Msa1269190 | AT1G26400.1 | 33.774 | 530 | 241 | 14 | 8 | 440 | 5 | 521 | 6.68e-88 | 278 |
| Msa1269190 | AT4G20800.1 | 33.008 | 512 | 243 | 12 | 23 | 441 | 19 | 523 | 1.83e-87 | 277 |
| Msa1269190 | AT2G34810.1 | 32.157 | 510 | 246 | 10 | 31 | 443 | 33 | 539 | 4.08e-80 | 258 |
Find 88 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTATGCTTGTTTGAATA+TGG | 0.141661 | 8_3:-2395385 | None:intergenic |
| TGAATCGGTTCTTTACTTTA+TGG | 0.151488 | 8_3:+2396145 | Msa1269190:CDS |
| GTTATAAGCAAGCTAGTATT+TGG | 0.173497 | 8_3:+2396589 | Msa1269190:CDS |
| GCAATGGGTGAAGATTATTT+TGG | 0.226291 | 8_3:+2395771 | Msa1269190:CDS |
| TAGAAAACTTTATAGTTATA+TGG | 0.249330 | 8_3:+2396479 | Msa1269190:CDS |
| AATTATAGAGATCTTGATAT+TGG | 0.259521 | 8_3:+2396540 | Msa1269190:CDS |
| AATGAACTGAGTAATAAATT+TGG | 0.287296 | 8_3:-2396410 | None:intergenic |
| GAATCGGTTCTTTACTTTAT+GGG | 0.292451 | 8_3:+2396146 | Msa1269190:CDS |
| AAGGGTAAATTCAAGTATAA+AGG | 0.303183 | 8_3:+2395986 | Msa1269190:CDS |
| GTGAGATCAAGGATGATAAA+TGG | 0.304625 | 8_3:-2395488 | None:intergenic |
| AAATATCACCATAGCATCTT+TGG | 0.304978 | 8_3:-2396313 | None:intergenic |
| ATATTTCAAGCCTTGTTTCT+TGG | 0.305951 | 8_3:+2396035 | Msa1269190:CDS |
| ATTATAGAGATCTTGATATT+GGG | 0.316617 | 8_3:+2396541 | Msa1269190:CDS |
| ATTCCATTTCCACATAGATA+TGG | 0.327139 | 8_3:+2396378 | Msa1269190:CDS |
| GGAACCTTGGTTCGTAAATT+CGG | 0.334327 | 8_3:+2395681 | Msa1269190:CDS |
| GTTCATTTCTGAAGAAGTTA+AGG | 0.334950 | 8_3:-2396674 | None:intergenic |
| AATTATGCTTGTTTGAATAT+GGG | 0.347218 | 8_3:-2395384 | None:intergenic |
| AGGGTAAATTCAAGTATAAA+GGG | 0.347661 | 8_3:+2395987 | Msa1269190:CDS |
| GGATTCGAATCTGCAGGTTA+TGG | 0.348552 | 8_3:-2395418 | None:intergenic |
| ATAGTAAAATATAAGTTTAG+AGG | 0.351664 | 8_3:-2395122 | None:intergenic |
| TTATAAGCAAGCTAGTATTT+GGG | 0.359669 | 8_3:+2396590 | Msa1269190:CDS |
| TATTGATGAGTAAGAGGAAT+TGG | 0.360998 | 8_3:-2395279 | None:intergenic |
| CTCTGAAGTTTGTGAGATCA+AGG | 0.366703 | 8_3:-2395499 | None:intergenic |
| GTGATAATGACAAGAGGTTT+AGG | 0.372360 | 8_3:-2395347 | None:intergenic |
| CTTGGTGACTTTGAAACAAA+AGG | 0.372572 | 8_3:-2396504 | None:intergenic |
| AAATTTATTACTCAGTTCAT+TGG | 0.379935 | 8_3:+2396412 | Msa1269190:CDS |
| TTTCCATATCTATGTGGAAA+TGG | 0.380986 | 8_3:-2396381 | None:intergenic |
| TTTGAGTATTGATGAGTAAG+AGG | 0.381041 | 8_3:-2395285 | None:intergenic |
| TGAATATGGGAAATCTGTTT+AGG | 0.386909 | 8_3:-2395371 | None:intergenic |
| CAAGAACAACTTCAAAAGAT+TGG | 0.391940 | 8_3:+2396626 | Msa1269190:CDS |
| CACATCAGTGGCGGCGGCTA+TGG | 0.400837 | 8_3:+2395660 | Msa1269190:CDS |
| AAATTGGATTAGAAGGAATA+TGG | 0.403457 | 8_3:+2396268 | Msa1269190:intron |
| CAAGAGAAGTTTCCTGAGCT+TGG | 0.412203 | 8_3:+2396086 | Msa1269190:CDS |
| TTCATTTCTGAAGAAGTTAA+GGG | 0.418127 | 8_3:-2396673 | None:intergenic |
| TACCTTCTCTCATGTGTTCA+AGG | 0.422099 | 8_3:+2396703 | Msa1269190:CDS |
| AAGATTGTGTTGAGATGAGT+TGG | 0.428995 | 8_3:+2396120 | Msa1269190:CDS |
| GAAGTTTCCTGAGCTTGGTT+TGG | 0.437875 | 8_3:+2396091 | Msa1269190:CDS |
| TTTCAAGCCTTGTTTCTTGG+AGG | 0.440275 | 8_3:+2396038 | Msa1269190:CDS |
| CAAAGTCATGGCCACCGCTT+CGG | 0.450183 | 8_3:-2395439 | None:intergenic |
| AAGCGGTGGCCATGACTTTG+AGG | 0.450822 | 8_3:+2395442 | Msa1269190:CDS |
| TGAGATCAAGGATGATAAAT+GGG | 0.474438 | 8_3:-2395487 | None:intergenic |
| AGAACAGCTTGGGTTCAATC+TGG | 0.484147 | 8_3:+2395545 | Msa1269190:CDS |
| AATTACTGTTATCTTACAAA+GGG | 0.491690 | 8_3:+2395968 | Msa1269190:CDS |
| TGAGTAAGAGGAATTGGCTT+TGG | 0.492341 | 8_3:-2395273 | None:intergenic |
| TGTAGAAAGCAGAACAGCTT+GGG | 0.494574 | 8_3:+2395535 | Msa1269190:CDS |
| CTATCCATTATGCCACCATA+AGG | 0.494662 | 8_3:-2396339 | None:intergenic |
| TGAGATGAGTTGGGTTGAAT+CGG | 0.513533 | 8_3:+2396130 | Msa1269190:CDS |
| ATTTCTTGACAGAGAAGCAA+TGG | 0.520988 | 8_3:+2395755 | Msa1269190:CDS |
| TAATTGATATATGCAGCTCT+TGG | 0.521563 | 8_3:-2396522 | None:intergenic |
| AGATTGTGTTGAGATGAGTT+GGG | 0.523370 | 8_3:+2396121 | Msa1269190:CDS |
| TCTCTAACCAAACCAAGCTC+AGG | 0.524526 | 8_3:-2396098 | None:intergenic |
| GACAAAGAAATCAGCAGCTA+AGG | 0.525403 | 8_3:+2396726 | Msa1269190:CDS |
| CGCTTCGGATTCGAATCTGC+AGG | 0.531779 | 8_3:-2395424 | None:intergenic |
| AGCGGTGGCCATGACTTTGA+GGG | 0.532159 | 8_3:+2395443 | Msa1269190:CDS |
| AAGAGGTTTAGGTGTTGTGT+TGG | 0.535453 | 8_3:-2395336 | None:intergenic |
| AAATGGGACTTCAGAAACAT+AGG | 0.536814 | 8_3:-2395471 | None:intergenic |
| TATAAATTTCCATATCTATG+TGG | 0.540221 | 8_3:-2396387 | None:intergenic |
| TTTCTTGACAGAGAAGCAAT+GGG | 0.552335 | 8_3:+2395756 | Msa1269190:CDS |
| TGGCGGCGGCTATGGAACCT+TGG | 0.554368 | 8_3:+2395668 | Msa1269190:CDS |
| GGTGGACACATCAGTGGCGG+CGG | 0.558776 | 8_3:+2395654 | Msa1269190:CDS |
| TGGCCTATGTTTCATGATGA+TGG | 0.560963 | 8_3:+2396288 | Msa1269190:CDS |
| GCACCATCATCATGAAACAT+AGG | 0.563262 | 8_3:-2396291 | None:intergenic |
| AAATTACTGTTATCTTACAA+AGG | 0.566762 | 8_3:+2395967 | Msa1269190:CDS |
| TCCCTTGAACACATGAGAGA+AGG | 0.572099 | 8_3:-2396705 | None:intergenic |
| ATGTAGAAAGCAGAACAGCT+TGG | 0.572213 | 8_3:+2395534 | Msa1269190:CDS |
| TTATAGAGATCTTGATATTG+GGG | 0.576997 | 8_3:+2396542 | Msa1269190:CDS |
| TGCTCACATAATTGATGTGA+AGG | 0.585552 | 8_3:+2395728 | Msa1269190:CDS |
| GCATCAAGAAAGTGATGAGG+TGG | 0.587589 | 8_3:+2396434 | Msa1269190:CDS |
| CAACAAAGCTTATTCACAAG+TGG | 0.589114 | 8_3:+2395911 | Msa1269190:CDS |
| TGTCCTACTATAGGTGTTGG+TGG | 0.598722 | 8_3:+2395636 | Msa1269190:intron |
| GTGGCCATGACTTTGAGGGT+CGG | 0.601490 | 8_3:+2395447 | Msa1269190:CDS |
| ACCTTCTCTCATGTGTTCAA+GGG | 0.603782 | 8_3:+2396704 | Msa1269190:CDS |
| ATTGGGGTGAATAATAACAA+TGG | 0.606283 | 8_3:+2396558 | Msa1269190:CDS |
| TATAAGCAAGCTAGTATTTG+GGG | 0.615112 | 8_3:+2396591 | Msa1269190:CDS |
| TGATGGTGCCAAAGATGCTA+TGG | 0.619348 | 8_3:+2396305 | Msa1269190:CDS |
| CAGATTCGAATCCGAAGCGG+TGG | 0.621977 | 8_3:+2395428 | Msa1269190:CDS |
| TCATTTCTGAAGAAGTTAAG+GGG | 0.625972 | 8_3:-2396672 | None:intergenic |
| ATCTACACCTCCAAGAAACA+AGG | 0.636642 | 8_3:-2396045 | None:intergenic |
| GGGTAAATTCAAGTATAAAG+GGG | 0.641672 | 8_3:+2395988 | Msa1269190:CDS |
| AGGACCGACCCTCAAAGTCA+TGG | 0.642967 | 8_3:-2395451 | None:intergenic |
| GGTGTTGGTGGACACATCAG+TGG | 0.646578 | 8_3:+2395648 | Msa1269190:intron |
| GTTGGTGGACACATCAGTGG+CGG | 0.651631 | 8_3:+2395651 | Msa1269190:CDS |
| AATAACTATAGAGACACTGA+AGG | 0.658653 | 8_3:-2395214 | None:intergenic |
| TTAGGTGTGATAATGACAAG+AGG | 0.664428 | 8_3:-2395353 | None:intergenic |
| AAGACCGAATTTACGAACCA+AGG | 0.678437 | 8_3:-2395685 | None:intergenic |
| GCTCACATAATTGATGTGAA+GGG | 0.694549 | 8_3:+2395729 | Msa1269190:CDS |
| TTGGCATCAAGAAAGTGATG+AGG | 0.701714 | 8_3:+2396431 | Msa1269190:CDS |
| CTGCAGATTCGAATCCGAAG+CGG | 0.713192 | 8_3:+2395425 | Msa1269190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGTAAAATATAAGTTTAG+AGG | - | chr8_3:2395125-2395144 | None:intergenic | 15.0% |
| !! | TAGAAAACTTTATAGTTATA+TGG | + | chr8_3:2396479-2396498 | Msa1269190:CDS | 15.0% |
| !! | ATAGTAAAATATAAGTTTAG+AGG | - | chr8_3:2395125-2395144 | None:intergenic | 15.0% |
| !! | TAGAAAACTTTATAGTTATA+TGG | + | chr8_3:2396479-2396498 | Msa1269190:CDS | 15.0% |
| !! | AATTATGCTTGTTTGAATAT+GGG | - | chr8_3:2395387-2395406 | None:intergenic | 20.0% |
| !! | AAATTATGCTTGTTTGAATA+TGG | - | chr8_3:2395388-2395407 | None:intergenic | 20.0% |
| !! | AAATTACTGTTATCTTACAA+AGG | + | chr8_3:2395967-2395986 | Msa1269190:CDS | 20.0% |
| !! | AATTACTGTTATCTTACAAA+GGG | + | chr8_3:2395968-2395987 | Msa1269190:CDS | 20.0% |
| !! | TATAAATTTCCATATCTATG+TGG | - | chr8_3:2396390-2396409 | None:intergenic | 20.0% |
| !! | AATGAACTGAGTAATAAATT+TGG | - | chr8_3:2396413-2396432 | None:intergenic | 20.0% |
| !! | AAATTTATTACTCAGTTCAT+TGG | + | chr8_3:2396412-2396431 | Msa1269190:CDS | 20.0% |
| !! | TGGAAAAAATGAAAATGAAT+TGG | + | chr8_3:2396454-2396473 | Msa1269190:CDS | 20.0% |
| !! | AATTATAGAGATCTTGATAT+TGG | + | chr8_3:2396540-2396559 | Msa1269190:CDS | 20.0% |
| !! | ATTATAGAGATCTTGATATT+GGG | + | chr8_3:2396541-2396560 | Msa1269190:CDS | 20.0% |
| !! | AATTATGCTTGTTTGAATAT+GGG | - | chr8_3:2395387-2395406 | None:intergenic | 20.0% |
| !! | AAATTATGCTTGTTTGAATA+TGG | - | chr8_3:2395388-2395407 | None:intergenic | 20.0% |
| !! | AAATTACTGTTATCTTACAA+AGG | + | chr8_3:2395967-2395986 | Msa1269190:CDS | 20.0% |
| !! | AATTACTGTTATCTTACAAA+GGG | + | chr8_3:2395968-2395987 | Msa1269190:CDS | 20.0% |
| !! | TATAAATTTCCATATCTATG+TGG | - | chr8_3:2396390-2396409 | None:intergenic | 20.0% |
| !! | AATGAACTGAGTAATAAATT+TGG | - | chr8_3:2396413-2396432 | None:intergenic | 20.0% |
| !! | AAATTTATTACTCAGTTCAT+TGG | + | chr8_3:2396412-2396431 | Msa1269190:CDS | 20.0% |
| !! | TGGAAAAAATGAAAATGAAT+TGG | + | chr8_3:2396454-2396473 | Msa1269190:CDS | 20.0% |
| !! | AATTATAGAGATCTTGATAT+TGG | + | chr8_3:2396540-2396559 | Msa1269190:CDS | 20.0% |
| !! | ATTATAGAGATCTTGATATT+GGG | + | chr8_3:2396541-2396560 | Msa1269190:CDS | 20.0% |
| !!! | AACCAAGATTTTGGTTTTTT+CGG | - | chr8_3:2395603-2395622 | None:intergenic | 25.0% |
| ! | TCTTTAATGTTCCAAAAACA+TGG | + | chr8_3:2395879-2395898 | Msa1269190:CDS | 25.0% |
| ! | AAGGGTAAATTCAAGTATAA+AGG | + | chr8_3:2395986-2396005 | Msa1269190:CDS | 25.0% |
| ! | AGGGTAAATTCAAGTATAAA+GGG | + | chr8_3:2395987-2396006 | Msa1269190:CDS | 25.0% |
| !! | AAATTGGATTAGAAGGAATA+TGG | + | chr8_3:2396268-2396287 | Msa1269190:intron | 25.0% |
| !!! | ATGGTGATATTTTTTCCTTA+TGG | + | chr8_3:2396324-2396343 | Msa1269190:CDS | 25.0% |
| ! | TTATAGAGATCTTGATATTG+GGG | + | chr8_3:2396542-2396561 | Msa1269190:CDS | 25.0% |
| ! | TTATAAGCAAGCTAGTATTT+GGG | + | chr8_3:2396590-2396609 | Msa1269190:CDS | 25.0% |
| !! | TTCATTTCTGAAGAAGTTAA+GGG | - | chr8_3:2396676-2396695 | None:intergenic | 25.0% |
| !!! | AACCAAGATTTTGGTTTTTT+CGG | - | chr8_3:2395603-2395622 | None:intergenic | 25.0% |
| ! | TCTTTAATGTTCCAAAAACA+TGG | + | chr8_3:2395879-2395898 | Msa1269190:CDS | 25.0% |
| ! | AAGGGTAAATTCAAGTATAA+AGG | + | chr8_3:2395986-2396005 | Msa1269190:CDS | 25.0% |
| ! | AGGGTAAATTCAAGTATAAA+GGG | + | chr8_3:2395987-2396006 | Msa1269190:CDS | 25.0% |
| !! | AAATTGGATTAGAAGGAATA+TGG | + | chr8_3:2396268-2396287 | Msa1269190:intron | 25.0% |
| !!! | ATGGTGATATTTTTTCCTTA+TGG | + | chr8_3:2396324-2396343 | Msa1269190:CDS | 25.0% |
| ! | TTATAGAGATCTTGATATTG+GGG | + | chr8_3:2396542-2396561 | Msa1269190:CDS | 25.0% |
| ! | TTATAAGCAAGCTAGTATTT+GGG | + | chr8_3:2396590-2396609 | Msa1269190:CDS | 25.0% |
| !! | TTCATTTCTGAAGAAGTTAA+GGG | - | chr8_3:2396676-2396695 | None:intergenic | 25.0% |
| AATAACTATAGAGACACTGA+AGG | - | chr8_3:2395217-2395236 | None:intergenic | 30.0% | |
| TATTGATGAGTAAGAGGAAT+TGG | - | chr8_3:2395282-2395301 | None:intergenic | 30.0% | |
| !! | TTTGAGTATTGATGAGTAAG+AGG | - | chr8_3:2395288-2395307 | None:intergenic | 30.0% |
| TGAATATGGGAAATCTGTTT+AGG | - | chr8_3:2395374-2395393 | None:intergenic | 30.0% | |
| TGAGATCAAGGATGATAAAT+GGG | - | chr8_3:2395490-2395509 | None:intergenic | 30.0% | |
| TACCGAAAAAACCAAAATCT+TGG | + | chr8_3:2395598-2395617 | Msa1269190:intron | 30.0% | |
| AAAACCAAAATCTTGGTTTC+CGG | + | chr8_3:2395605-2395624 | Msa1269190:intron | 30.0% | |
| ! | CAATGGGTGAAGATTATTTT+GGG | + | chr8_3:2395772-2395791 | Msa1269190:CDS | 30.0% |
| !!! | AGATTATTTTGGGCTATTAG+AGG | + | chr8_3:2395782-2395801 | Msa1269190:CDS | 30.0% |
| !!! | GTTTTGGAGTCATAATTTCA+TGG | + | chr8_3:2395819-2395838 | Msa1269190:intron | 30.0% |
| TTAAAGACTGTCACAATTGA+TGG | - | chr8_3:2395866-2395885 | None:intergenic | 30.0% | |
| ! | TGCATTTTGTTCCATGTTTT+TGG | - | chr8_3:2395893-2395912 | None:intergenic | 30.0% |
| GGGTAAATTCAAGTATAAAG+GGG | + | chr8_3:2395988-2396007 | Msa1269190:CDS | 30.0% | |
| !! | ATATTTCAAGCCTTGTTTCT+TGG | + | chr8_3:2396035-2396054 | Msa1269190:CDS | 30.0% |
| ! | TGAATCGGTTCTTTACTTTA+TGG | + | chr8_3:2396145-2396164 | Msa1269190:CDS | 30.0% |
| ! | GAATCGGTTCTTTACTTTAT+GGG | + | chr8_3:2396146-2396165 | Msa1269190:CDS | 30.0% |
| CAAAATTCCATTCCTGAAAT+TGG | + | chr8_3:2396252-2396271 | Msa1269190:intron | 30.0% | |
| TTCTAATCCAATTTCAGGAA+TGG | - | chr8_3:2396262-2396281 | None:intergenic | 30.0% | |
| ! | ATTCCTGAAATTGGATTAGA+AGG | + | chr8_3:2396261-2396280 | Msa1269190:intron | 30.0% |
| ATTCCTTCTAATCCAATTTC+AGG | - | chr8_3:2396267-2396286 | None:intergenic | 30.0% | |
| AAATATCACCATAGCATCTT+TGG | - | chr8_3:2396316-2396335 | None:intergenic | 30.0% | |
| !!! | GTGATATTTTTTCCTTATGG+TGG | + | chr8_3:2396327-2396346 | Msa1269190:CDS | 30.0% |
| ATTCCATTTCCACATAGATA+TGG | + | chr8_3:2396378-2396397 | Msa1269190:CDS | 30.0% | |
| TTTCCATATCTATGTGGAAA+TGG | - | chr8_3:2396384-2396403 | None:intergenic | 30.0% | |
| TAATTGATATATGCAGCTCT+TGG | - | chr8_3:2396525-2396544 | None:intergenic | 30.0% | |
| ATTGGGGTGAATAATAACAA+TGG | + | chr8_3:2396558-2396577 | Msa1269190:CDS | 30.0% | |
| GTTATAAGCAAGCTAGTATT+TGG | + | chr8_3:2396589-2396608 | Msa1269190:CDS | 30.0% | |
| TATAAGCAAGCTAGTATTTG+GGG | + | chr8_3:2396591-2396610 | Msa1269190:CDS | 30.0% | |
| CAAGAACAACTTCAAAAGAT+TGG | + | chr8_3:2396626-2396645 | Msa1269190:CDS | 30.0% | |
| ! | TCATTTCTGAAGAAGTTAAG+GGG | - | chr8_3:2396675-2396694 | None:intergenic | 30.0% |
| ! | GTTCATTTCTGAAGAAGTTA+AGG | - | chr8_3:2396677-2396696 | None:intergenic | 30.0% |
| AATAACTATAGAGACACTGA+AGG | - | chr8_3:2395217-2395236 | None:intergenic | 30.0% | |
| TATTGATGAGTAAGAGGAAT+TGG | - | chr8_3:2395282-2395301 | None:intergenic | 30.0% | |
| !! | TTTGAGTATTGATGAGTAAG+AGG | - | chr8_3:2395288-2395307 | None:intergenic | 30.0% |
| TGAATATGGGAAATCTGTTT+AGG | - | chr8_3:2395374-2395393 | None:intergenic | 30.0% | |
| TGAGATCAAGGATGATAAAT+GGG | - | chr8_3:2395490-2395509 | None:intergenic | 30.0% | |
| TACCGAAAAAACCAAAATCT+TGG | + | chr8_3:2395598-2395617 | Msa1269190:intron | 30.0% | |
| AAAACCAAAATCTTGGTTTC+CGG | + | chr8_3:2395605-2395624 | Msa1269190:intron | 30.0% | |
| ! | CAATGGGTGAAGATTATTTT+GGG | + | chr8_3:2395772-2395791 | Msa1269190:CDS | 30.0% |
| !!! | AGATTATTTTGGGCTATTAG+AGG | + | chr8_3:2395782-2395801 | Msa1269190:CDS | 30.0% |
| !!! | GTTTTGGAGTCATAATTTCA+TGG | + | chr8_3:2395819-2395838 | Msa1269190:intron | 30.0% |
| TTAAAGACTGTCACAATTGA+TGG | - | chr8_3:2395866-2395885 | None:intergenic | 30.0% | |
| ! | TGCATTTTGTTCCATGTTTT+TGG | - | chr8_3:2395893-2395912 | None:intergenic | 30.0% |
| GGGTAAATTCAAGTATAAAG+GGG | + | chr8_3:2395988-2396007 | Msa1269190:CDS | 30.0% | |
| !! | ATATTTCAAGCCTTGTTTCT+TGG | + | chr8_3:2396035-2396054 | Msa1269190:CDS | 30.0% |
| ! | TGAATCGGTTCTTTACTTTA+TGG | + | chr8_3:2396145-2396164 | Msa1269190:CDS | 30.0% |
| ! | GAATCGGTTCTTTACTTTAT+GGG | + | chr8_3:2396146-2396165 | Msa1269190:CDS | 30.0% |
| CAAAATTCCATTCCTGAAAT+TGG | + | chr8_3:2396252-2396271 | Msa1269190:intron | 30.0% | |
| TTCTAATCCAATTTCAGGAA+TGG | - | chr8_3:2396262-2396281 | None:intergenic | 30.0% | |
| ! | ATTCCTGAAATTGGATTAGA+AGG | + | chr8_3:2396261-2396280 | Msa1269190:intron | 30.0% |
| ATTCCTTCTAATCCAATTTC+AGG | - | chr8_3:2396267-2396286 | None:intergenic | 30.0% | |
| AAATATCACCATAGCATCTT+TGG | - | chr8_3:2396316-2396335 | None:intergenic | 30.0% | |
| !!! | GTGATATTTTTTCCTTATGG+TGG | + | chr8_3:2396327-2396346 | Msa1269190:CDS | 30.0% |
| ATTCCATTTCCACATAGATA+TGG | + | chr8_3:2396378-2396397 | Msa1269190:CDS | 30.0% | |
| TTTCCATATCTATGTGGAAA+TGG | - | chr8_3:2396384-2396403 | None:intergenic | 30.0% | |
| TAATTGATATATGCAGCTCT+TGG | - | chr8_3:2396525-2396544 | None:intergenic | 30.0% | |
| ATTGGGGTGAATAATAACAA+TGG | + | chr8_3:2396558-2396577 | Msa1269190:CDS | 30.0% | |
| GTTATAAGCAAGCTAGTATT+TGG | + | chr8_3:2396589-2396608 | Msa1269190:CDS | 30.0% | |
| TATAAGCAAGCTAGTATTTG+GGG | + | chr8_3:2396591-2396610 | Msa1269190:CDS | 30.0% | |
| CAAGAACAACTTCAAAAGAT+TGG | + | chr8_3:2396626-2396645 | Msa1269190:CDS | 30.0% | |
| ! | TCATTTCTGAAGAAGTTAAG+GGG | - | chr8_3:2396675-2396694 | None:intergenic | 30.0% |
| ! | GTTCATTTCTGAAGAAGTTA+AGG | - | chr8_3:2396677-2396696 | None:intergenic | 30.0% |
| ! | GTGATAATGACAAGAGGTTT+AGG | - | chr8_3:2395350-2395369 | None:intergenic | 35.0% |
| ! | TTAGGTGTGATAATGACAAG+AGG | - | chr8_3:2395356-2395375 | None:intergenic | 35.0% |
| AAATGGGACTTCAGAAACAT+AGG | - | chr8_3:2395474-2395493 | None:intergenic | 35.0% | |
| GTGAGATCAAGGATGATAAA+TGG | - | chr8_3:2395491-2395510 | None:intergenic | 35.0% | |
| AAACCAAAATCTTGGTTTCC+GGG | + | chr8_3:2395606-2395625 | Msa1269190:intron | 35.0% | |
| TGCTCACATAATTGATGTGA+AGG | + | chr8_3:2395728-2395747 | Msa1269190:CDS | 35.0% | |
| GCTCACATAATTGATGTGAA+GGG | + | chr8_3:2395729-2395748 | Msa1269190:CDS | 35.0% | |
| ATTTCTTGACAGAGAAGCAA+TGG | + | chr8_3:2395755-2395774 | Msa1269190:CDS | 35.0% | |
| TTTCTTGACAGAGAAGCAAT+GGG | + | chr8_3:2395756-2395775 | Msa1269190:CDS | 35.0% | |
| ! | GCAATGGGTGAAGATTATTT+TGG | + | chr8_3:2395771-2395790 | Msa1269190:CDS | 35.0% |
| !!! | TTATTTTGGGCTATTAGAGG+TGG | + | chr8_3:2395785-2395804 | Msa1269190:intron | 35.0% |
| CAACAAAGCTTATTCACAAG+TGG | + | chr8_3:2395911-2395930 | Msa1269190:CDS | 35.0% | |
| AAGATTGTGTTGAGATGAGT+TGG | + | chr8_3:2396120-2396139 | Msa1269190:CDS | 35.0% | |
| AGATTGTGTTGAGATGAGTT+GGG | + | chr8_3:2396121-2396140 | Msa1269190:CDS | 35.0% | |
| ! | TTTTCCTTATGGTGGCATAA+TGG | + | chr8_3:2396335-2396354 | Msa1269190:CDS | 35.0% |
| !! | CTTGGTGACTTTGAAACAAA+AGG | - | chr8_3:2396507-2396526 | None:intergenic | 35.0% |
| ! | GTGATAATGACAAGAGGTTT+AGG | - | chr8_3:2395350-2395369 | None:intergenic | 35.0% |
| ! | TTAGGTGTGATAATGACAAG+AGG | - | chr8_3:2395356-2395375 | None:intergenic | 35.0% |
| AAATGGGACTTCAGAAACAT+AGG | - | chr8_3:2395474-2395493 | None:intergenic | 35.0% | |
| GTGAGATCAAGGATGATAAA+TGG | - | chr8_3:2395491-2395510 | None:intergenic | 35.0% | |
| AAACCAAAATCTTGGTTTCC+GGG | + | chr8_3:2395606-2395625 | Msa1269190:intron | 35.0% | |
| TGCTCACATAATTGATGTGA+AGG | + | chr8_3:2395728-2395747 | Msa1269190:CDS | 35.0% | |
| GCTCACATAATTGATGTGAA+GGG | + | chr8_3:2395729-2395748 | Msa1269190:CDS | 35.0% | |
| ATTTCTTGACAGAGAAGCAA+TGG | + | chr8_3:2395755-2395774 | Msa1269190:CDS | 35.0% | |
| TTTCTTGACAGAGAAGCAAT+GGG | + | chr8_3:2395756-2395775 | Msa1269190:CDS | 35.0% | |
| ! | GCAATGGGTGAAGATTATTT+TGG | + | chr8_3:2395771-2395790 | Msa1269190:CDS | 35.0% |
| !!! | TTATTTTGGGCTATTAGAGG+TGG | + | chr8_3:2395785-2395804 | Msa1269190:intron | 35.0% |
| CAACAAAGCTTATTCACAAG+TGG | + | chr8_3:2395911-2395930 | Msa1269190:CDS | 35.0% | |
| AAGATTGTGTTGAGATGAGT+TGG | + | chr8_3:2396120-2396139 | Msa1269190:CDS | 35.0% | |
| AGATTGTGTTGAGATGAGTT+GGG | + | chr8_3:2396121-2396140 | Msa1269190:CDS | 35.0% | |
| ! | TTTTCCTTATGGTGGCATAA+TGG | + | chr8_3:2396335-2396354 | Msa1269190:CDS | 35.0% |
| !! | CTTGGTGACTTTGAAACAAA+AGG | - | chr8_3:2396507-2396526 | None:intergenic | 35.0% |
| ! | TGAGTAAGAGGAATTGGCTT+TGG | - | chr8_3:2395276-2395295 | None:intergenic | 40.0% |
| ! | AAGAGGTTTAGGTGTTGTGT+TGG | - | chr8_3:2395339-2395358 | None:intergenic | 40.0% |
| !! | CTCTGAAGTTTGTGAGATCA+AGG | - | chr8_3:2395502-2395521 | None:intergenic | 40.0% |
| ATGTAGAAAGCAGAACAGCT+TGG | + | chr8_3:2395534-2395553 | Msa1269190:CDS | 40.0% | |
| TGTAGAAAGCAGAACAGCTT+GGG | + | chr8_3:2395535-2395554 | Msa1269190:CDS | 40.0% | |
| GAATGTCCTACTATAGGTGT+TGG | + | chr8_3:2395633-2395652 | Msa1269190:intron | 40.0% | |
| ! | GGAACCTTGGTTCGTAAATT+CGG | + | chr8_3:2395681-2395700 | Msa1269190:CDS | 40.0% |
| AAGACCGAATTTACGAACCA+AGG | - | chr8_3:2395688-2395707 | None:intergenic | 40.0% | |
| !! | TTTCAAGCCTTGTTTCTTGG+AGG | + | chr8_3:2396038-2396057 | Msa1269190:CDS | 40.0% |
| ATCTACACCTCCAAGAAACA+AGG | - | chr8_3:2396048-2396067 | None:intergenic | 40.0% | |
| !! | TGAGATGAGTTGGGTTGAAT+CGG | + | chr8_3:2396130-2396149 | Msa1269190:CDS | 40.0% |
| ! | GTTTCAAGTGGTTCGTCTTT+CGG | - | chr8_3:2396175-2396194 | None:intergenic | 40.0% |
| TGGCCTATGTTTCATGATGA+TGG | + | chr8_3:2396288-2396307 | Msa1269190:CDS | 40.0% | |
| GCACCATCATCATGAAACAT+AGG | - | chr8_3:2396294-2396313 | None:intergenic | 40.0% | |
| CTATCCATTATGCCACCATA+AGG | - | chr8_3:2396342-2396361 | None:intergenic | 40.0% | |
| TTGGCATCAAGAAAGTGATG+AGG | + | chr8_3:2396431-2396450 | Msa1269190:CDS | 40.0% | |
| TACCTTCTCTCATGTGTTCA+AGG | + | chr8_3:2396703-2396722 | Msa1269190:CDS | 40.0% | |
| ACCTTCTCTCATGTGTTCAA+GGG | + | chr8_3:2396704-2396723 | Msa1269190:CDS | 40.0% | |
| ! | TGAGTAAGAGGAATTGGCTT+TGG | - | chr8_3:2395276-2395295 | None:intergenic | 40.0% |
| ! | AAGAGGTTTAGGTGTTGTGT+TGG | - | chr8_3:2395339-2395358 | None:intergenic | 40.0% |
| !! | CTCTGAAGTTTGTGAGATCA+AGG | - | chr8_3:2395502-2395521 | None:intergenic | 40.0% |
| ATGTAGAAAGCAGAACAGCT+TGG | + | chr8_3:2395534-2395553 | Msa1269190:CDS | 40.0% | |
| TGTAGAAAGCAGAACAGCTT+GGG | + | chr8_3:2395535-2395554 | Msa1269190:CDS | 40.0% | |
| GAATGTCCTACTATAGGTGT+TGG | + | chr8_3:2395633-2395652 | Msa1269190:intron | 40.0% | |
| ! | GGAACCTTGGTTCGTAAATT+CGG | + | chr8_3:2395681-2395700 | Msa1269190:CDS | 40.0% |
| AAGACCGAATTTACGAACCA+AGG | - | chr8_3:2395688-2395707 | None:intergenic | 40.0% | |
| !! | TTTCAAGCCTTGTTTCTTGG+AGG | + | chr8_3:2396038-2396057 | Msa1269190:CDS | 40.0% |
| ATCTACACCTCCAAGAAACA+AGG | - | chr8_3:2396048-2396067 | None:intergenic | 40.0% | |
| !! | TGAGATGAGTTGGGTTGAAT+CGG | + | chr8_3:2396130-2396149 | Msa1269190:CDS | 40.0% |
| ! | GTTTCAAGTGGTTCGTCTTT+CGG | - | chr8_3:2396175-2396194 | None:intergenic | 40.0% |
| TGGCCTATGTTTCATGATGA+TGG | + | chr8_3:2396288-2396307 | Msa1269190:CDS | 40.0% | |
| GCACCATCATCATGAAACAT+AGG | - | chr8_3:2396294-2396313 | None:intergenic | 40.0% | |
| CTATCCATTATGCCACCATA+AGG | - | chr8_3:2396342-2396361 | None:intergenic | 40.0% | |
| TTGGCATCAAGAAAGTGATG+AGG | + | chr8_3:2396431-2396450 | Msa1269190:CDS | 40.0% | |
| TACCTTCTCTCATGTGTTCA+AGG | + | chr8_3:2396703-2396722 | Msa1269190:CDS | 40.0% | |
| ACCTTCTCTCATGTGTTCAA+GGG | + | chr8_3:2396704-2396723 | Msa1269190:CDS | 40.0% | |
| GGATTCGAATCTGCAGGTTA+TGG | - | chr8_3:2395421-2395440 | None:intergenic | 45.0% | |
| AGAACAGCTTGGGTTCAATC+TGG | + | chr8_3:2395545-2395564 | Msa1269190:CDS | 45.0% | |
| GGTTCAATCTGGTGCAACAA+TGG | + | chr8_3:2395556-2395575 | Msa1269190:intron | 45.0% | |
| ATAGTAGGACATTCACCACC+CGG | - | chr8_3:2395627-2395646 | None:intergenic | 45.0% | |
| GGTGGTGAATGTCCTACTAT+AGG | + | chr8_3:2395627-2395646 | Msa1269190:intron | 45.0% | |
| !! | TGTCCTACTATAGGTGTTGG+TGG | + | chr8_3:2395636-2395655 | Msa1269190:intron | 45.0% |
| TGTCCACCAACACCTATAGT+AGG | - | chr8_3:2395642-2395661 | None:intergenic | 45.0% | |
| ! | TTTTGGGCTATTAGAGGTGG+TGG | + | chr8_3:2395788-2395807 | Msa1269190:intron | 45.0% |
| CAAGAGAAGTTTCCTGAGCT+TGG | + | chr8_3:2396086-2396105 | Msa1269190:CDS | 45.0% | |
| GAAGTTTCCTGAGCTTGGTT+TGG | + | chr8_3:2396091-2396110 | Msa1269190:CDS | 45.0% | |
| TCTCTAACCAAACCAAGCTC+AGG | - | chr8_3:2396101-2396120 | None:intergenic | 45.0% | |
| CTGTTGAGCAACGTTTCAAG+TGG | - | chr8_3:2396187-2396206 | None:intergenic | 45.0% | |
| CAACAGAACACTAGCTGCAA+AGG | + | chr8_3:2396201-2396220 | Msa1269190:intron | 45.0% | |
| ! | TGATGGTGCCAAAGATGCTA+TGG | + | chr8_3:2396305-2396324 | Msa1269190:CDS | 45.0% |
| GCATCAAGAAAGTGATGAGG+TGG | + | chr8_3:2396434-2396453 | Msa1269190:CDS | 45.0% | |
| TCCCTTGAACACATGAGAGA+AGG | - | chr8_3:2396708-2396727 | None:intergenic | 45.0% | |
| GGATTCGAATCTGCAGGTTA+TGG | - | chr8_3:2395421-2395440 | None:intergenic | 45.0% | |
| AGAACAGCTTGGGTTCAATC+TGG | + | chr8_3:2395545-2395564 | Msa1269190:CDS | 45.0% | |
| GGTTCAATCTGGTGCAACAA+TGG | + | chr8_3:2395556-2395575 | Msa1269190:intron | 45.0% | |
| ATAGTAGGACATTCACCACC+CGG | - | chr8_3:2395627-2395646 | None:intergenic | 45.0% | |
| GGTGGTGAATGTCCTACTAT+AGG | + | chr8_3:2395627-2395646 | Msa1269190:intron | 45.0% | |
| !! | TGTCCTACTATAGGTGTTGG+TGG | + | chr8_3:2395636-2395655 | Msa1269190:intron | 45.0% |
| TGTCCACCAACACCTATAGT+AGG | - | chr8_3:2395642-2395661 | None:intergenic | 45.0% | |
| ! | TTTTGGGCTATTAGAGGTGG+TGG | + | chr8_3:2395788-2395807 | Msa1269190:intron | 45.0% |
| CAAGAGAAGTTTCCTGAGCT+TGG | + | chr8_3:2396086-2396105 | Msa1269190:CDS | 45.0% | |
| GAAGTTTCCTGAGCTTGGTT+TGG | + | chr8_3:2396091-2396110 | Msa1269190:CDS | 45.0% | |
| TCTCTAACCAAACCAAGCTC+AGG | - | chr8_3:2396101-2396120 | None:intergenic | 45.0% | |
| CTGTTGAGCAACGTTTCAAG+TGG | - | chr8_3:2396187-2396206 | None:intergenic | 45.0% | |
| CAACAGAACACTAGCTGCAA+AGG | + | chr8_3:2396201-2396220 | Msa1269190:intron | 45.0% | |
| ! | TGATGGTGCCAAAGATGCTA+TGG | + | chr8_3:2396305-2396324 | Msa1269190:CDS | 45.0% |
| GCATCAAGAAAGTGATGAGG+TGG | + | chr8_3:2396434-2396453 | Msa1269190:CDS | 45.0% | |
| TCCCTTGAACACATGAGAGA+AGG | - | chr8_3:2396708-2396727 | None:intergenic | 45.0% | |
| CTGCAGATTCGAATCCGAAG+CGG | + | chr8_3:2395425-2395444 | Msa1269190:CDS | 50.0% | |
| ! | CCACCCGGAAACCAAGATTT+TGG | - | chr8_3:2395612-2395631 | None:intergenic | 50.0% |
| CCAAAATCTTGGTTTCCGGG+TGG | + | chr8_3:2395609-2395628 | Msa1269190:intron | 50.0% | |
| CTGCAGATTCGAATCCGAAG+CGG | + | chr8_3:2395425-2395444 | Msa1269190:CDS | 50.0% | |
| ! | CCACCCGGAAACCAAGATTT+TGG | - | chr8_3:2395612-2395631 | None:intergenic | 50.0% |
| CCAAAATCTTGGTTTCCGGG+TGG | + | chr8_3:2395609-2395628 | Msa1269190:intron | 50.0% | |
| CGCTTCGGATTCGAATCTGC+AGG | - | chr8_3:2395427-2395446 | None:intergenic | 55.0% | |
| CAGATTCGAATCCGAAGCGG+TGG | + | chr8_3:2395428-2395447 | Msa1269190:CDS | 55.0% | |
| CAAAGTCATGGCCACCGCTT+CGG | - | chr8_3:2395442-2395461 | None:intergenic | 55.0% | |
| AAGCGGTGGCCATGACTTTG+AGG | + | chr8_3:2395442-2395461 | Msa1269190:CDS | 55.0% | |
| AGCGGTGGCCATGACTTTGA+GGG | + | chr8_3:2395443-2395462 | Msa1269190:CDS | 55.0% | |
| ! | GTGGCCATGACTTTGAGGGT+CGG | + | chr8_3:2395447-2395466 | Msa1269190:CDS | 55.0% |
| AGGACCGACCCTCAAAGTCA+TGG | - | chr8_3:2395454-2395473 | None:intergenic | 55.0% | |
| !! | GGTGTTGGTGGACACATCAG+TGG | + | chr8_3:2395648-2395667 | Msa1269190:intron | 55.0% |
| ! | GTTGGTGGACACATCAGTGG+CGG | + | chr8_3:2395651-2395670 | Msa1269190:CDS | 55.0% |
| ! | TGGGCTATTAGAGGTGGTGG+AGG | + | chr8_3:2395791-2395810 | Msa1269190:intron | 55.0% |
| !!! | GGTGGTGGAGGAGCAAGTTT+TGG | + | chr8_3:2395803-2395822 | Msa1269190:intron | 55.0% |
| CGCTTCGGATTCGAATCTGC+AGG | - | chr8_3:2395427-2395446 | None:intergenic | 55.0% | |
| CAGATTCGAATCCGAAGCGG+TGG | + | chr8_3:2395428-2395447 | Msa1269190:CDS | 55.0% | |
| CAAAGTCATGGCCACCGCTT+CGG | - | chr8_3:2395442-2395461 | None:intergenic | 55.0% | |
| AAGCGGTGGCCATGACTTTG+AGG | + | chr8_3:2395442-2395461 | Msa1269190:CDS | 55.0% | |
| AGCGGTGGCCATGACTTTGA+GGG | + | chr8_3:2395443-2395462 | Msa1269190:CDS | 55.0% | |
| ! | GTGGCCATGACTTTGAGGGT+CGG | + | chr8_3:2395447-2395466 | Msa1269190:CDS | 55.0% |
| AGGACCGACCCTCAAAGTCA+TGG | - | chr8_3:2395454-2395473 | None:intergenic | 55.0% | |
| !! | GGTGTTGGTGGACACATCAG+TGG | + | chr8_3:2395648-2395667 | Msa1269190:intron | 55.0% |
| ! | GTTGGTGGACACATCAGTGG+CGG | + | chr8_3:2395651-2395670 | Msa1269190:CDS | 55.0% |
| ! | TGGGCTATTAGAGGTGGTGG+AGG | + | chr8_3:2395791-2395810 | Msa1269190:intron | 55.0% |
| !!! | GGTGGTGGAGGAGCAAGTTT+TGG | + | chr8_3:2395803-2395822 | Msa1269190:intron | 55.0% |
| GGTGGACACATCAGTGGCGG+CGG | + | chr8_3:2395654-2395673 | Msa1269190:CDS | 65.0% | |
| CACATCAGTGGCGGCGGCTA+TGG | + | chr8_3:2395660-2395679 | Msa1269190:CDS | 65.0% | |
| TGGCGGCGGCTATGGAACCT+TGG | + | chr8_3:2395668-2395687 | Msa1269190:CDS | 65.0% | |
| GGTGGACACATCAGTGGCGG+CGG | + | chr8_3:2395654-2395673 | Msa1269190:CDS | 65.0% | |
| CACATCAGTGGCGGCGGCTA+TGG | + | chr8_3:2395660-2395679 | Msa1269190:CDS | 65.0% | |
| TGGCGGCGGCTATGGAACCT+TGG | + | chr8_3:2395668-2395687 | Msa1269190:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 2395116 | 2396746 | 2395116 | ID=Msa1269190;Name=Msa1269190 |
| chr8_3 | mRNA | 2395116 | 2396746 | 2395116 | ID=Msa1269190-mRNA-1;Parent=Msa1269190;Name=Msa1269190-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0|1|1|1|4|0|453 |
| chr8_3 | exon | 2395116 | 2395566 | 2395116 | ID=Msa1269190-mRNA-1:exon:744;Parent=Msa1269190-mRNA-1 |
| chr8_3 | exon | 2395649 | 2395803 | 2395649 | ID=Msa1269190-mRNA-1:exon:745;Parent=Msa1269190-mRNA-1 |
| chr8_3 | exon | 2395879 | 2396167 | 2395879 | ID=Msa1269190-mRNA-1:exon:746;Parent=Msa1269190-mRNA-1 |
| chr8_3 | exon | 2396280 | 2396746 | 2396280 | ID=Msa1269190-mRNA-1:exon:747;Parent=Msa1269190-mRNA-1 |
| chr8_3 | CDS | 2395116 | 2395566 | 2395116 | ID=Msa1269190-mRNA-1:cds;Parent=Msa1269190-mRNA-1 |
| chr8_3 | CDS | 2395649 | 2395803 | 2395649 | ID=Msa1269190-mRNA-1:cds;Parent=Msa1269190-mRNA-1 |
| chr8_3 | CDS | 2395879 | 2396167 | 2395879 | ID=Msa1269190-mRNA-1:cds;Parent=Msa1269190-mRNA-1 |
| chr8_3 | CDS | 2396280 | 2396746 | 2396280 | ID=Msa1269190-mRNA-1:cds;Parent=Msa1269190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
