AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1269990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1269990 MtrunA17_Chr8g0346551 96.654 269 6 2 7 272 1 269 0.0 526
Msa1269990 MtrunA17_Chr3g0127201 45.973 298 121 12 7 272 1 290 1.94e-68 213
Msa1269990 MtrunA17_Chr1g0188851 45.423 284 101 16 1 263 10 260 9.21e-52 171
Msa1269990 MtrunA17_Chr2g0326001 75.000 72 16 1 15 84 23 94 7.32e-34 124
Msa1269990 MtrunA17_Chr3g0117601 52.000 125 45 4 16 136 45 158 9.66e-31 117
Msa1269990 MtrunA17_Chr8g0374251 54.808 104 41 2 27 130 65 162 1.37e-30 117
Msa1269990 MtrunA17_Chr4g0031411 72.059 68 19 0 17 84 62 129 2.83e-30 115
Msa1269990 MtrunA17_Chr8g0367161 66.250 80 24 2 21 98 21 99 9.46e-30 114
Msa1269990 MtrunA17_Chr4g0010151 43.796 137 70 2 17 146 69 205 1.11e-29 114
Msa1269990 MtrunA17_Chr4g0030051 69.014 71 20 1 14 82 23 93 1.72e-29 112
Msa1269990 MtrunA17_Chr3g0126201 76.562 64 13 1 23 84 42 105 2.19e-29 113
Msa1269990 MtrunA17_Chr4g0047001 73.529 68 14 1 32 99 57 120 3.20e-29 114
Msa1269990 MtrunA17_Chr8g0374111 48.214 112 48 2 17 122 10 117 5.01e-29 110
Msa1269990 MtrunA17_Chr1g0177251 87.037 54 7 0 31 84 13 66 5.03e-29 111
Msa1269990 MtrunA17_Chr2g0328021 63.636 77 28 0 27 103 59 135 6.39e-29 111
Msa1269990 MtrunA17_Chr2g0282441 77.966 59 12 1 23 81 19 76 4.75e-28 110
Msa1269990 MtrunA17_Chr5g0411951 78.182 55 12 0 26 80 39 93 6.54e-28 109
Msa1269990 MtrunA17_Chr8g0341671 72.131 61 17 0 27 87 17 77 1.35e-27 105
Msa1269990 MtrunA17_Chr7g0223311 83.019 53 9 0 32 84 79 131 4.06e-27 108
Msa1269990 MtrunA17_Chr7g0237921 79.245 53 11 0 32 84 78 130 5.82e-27 107
Msa1269990 MtrunA17_Chr2g0282051 58.108 74 30 1 12 85 28 100 8.19e-27 105
Msa1269990 MtrunA17_Chr4g0047761 74.138 58 14 1 28 85 70 126 3.81e-26 104
Msa1269990 MtrunA17_Chr3g0092111 69.492 59 18 0 25 83 131 189 5.47e-26 106
Msa1269990 MtrunA17_Chr4g0042481 64.062 64 23 0 25 88 117 180 2.09e-25 104
Msa1269990 MtrunA17_Chr4g0061761 77.358 53 12 0 28 80 38 90 3.49e-25 102
Msa1269990 MtrunA17_Chr2g0308011 81.633 49 9 0 30 78 37 85 4.75e-25 99.4
Msa1269990 MtrunA17_Chr7g0217581 58.974 78 25 1 25 95 227 304 5.18e-25 103
Msa1269990 MtrunA17_Chr7g0254161 61.905 63 24 0 25 87 96 158 5.71e-25 102
Msa1269990 MtrunA17_Chr6g0460721 60.317 63 25 0 25 87 84 146 7.01e-25 101
Msa1269990 MtrunA17_Chr2g0282511 79.592 49 10 0 30 78 45 93 1.43e-24 100
Msa1269990 MtrunA17_Chr2g0283811 63.636 66 22 1 18 83 37 100 1.54e-24 96.3
Msa1269990 MtrunA17_Chr8g0355261 61.290 62 24 0 25 86 113 174 2.39e-24 101
Msa1269990 MtrunA17_Chr6g0460731 46.875 96 49 1 5 100 73 166 2.54e-24 100
Msa1269990 MtrunA17_Chr6g0453321 66.102 59 20 0 25 83 131 189 3.88e-24 101
Msa1269990 MtrunA17_Chr5g0417571 62.712 59 22 0 25 83 133 191 2.29e-23 97.1
Msa1269990 MtrunA17_Chr5g0417601 66.667 54 18 0 30 83 140 193 2.92e-21 92.0
Msa1269990 MtrunA17_Chr5g0417561 56.250 64 28 0 20 83 109 172 9.67e-21 90.5
Msa1269990 MtrunA17_Chr5g0417551 56.250 64 28 0 20 83 117 180 1.04e-20 90.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1269990 AT3G61850.5 52.158 278 87 19 22 272 54 312 6.02e-67 211
Msa1269990 AT3G61850.4 51.625 277 90 18 22 272 66 324 9.91e-67 211
Msa1269990 AT3G61850.2 49.813 267 82 16 22 272 54 284 1.63e-64 203
Msa1269990 AT3G61850.3 49.813 267 82 16 22 272 54 284 1.63e-64 203
Msa1269990 AT3G61850.1 49.813 267 82 16 22 272 66 296 2.00e-64 204
Msa1269990 AT2G46590.1 43.408 311 105 13 21 272 59 357 2.92e-56 184
Msa1269990 AT2G46590.2 43.408 311 105 13 21 272 71 369 4.09e-56 184
Msa1269990 AT4G24060.1 38.907 311 124 15 19 272 40 341 7.62e-44 152
Msa1269990 AT4G00940.1 38.400 250 121 7 24 267 62 284 1.72e-40 142
Msa1269990 AT4G00940.3 38.400 250 121 7 24 267 62 284 1.72e-40 142
Msa1269990 AT4G00940.2 38.400 250 121 7 24 267 62 284 1.72e-40 142
Msa1269990 AT1G64620.1 37.143 315 126 11 16 267 33 338 1.19e-38 139
Msa1269990 AT5G60200.1 48.780 123 57 2 16 136 41 159 5.81e-33 121
Msa1269990 AT3G55370.1 73.529 68 18 0 17 84 63 130 1.37e-31 119
Msa1269990 AT3G55370.3 73.529 68 18 0 17 84 108 175 1.66e-31 120
Msa1269990 AT3G55370.2 73.529 68 18 0 17 84 63 130 1.91e-31 119
Msa1269990 AT2G28510.1 55.357 112 46 2 28 136 46 156 2.45e-31 118
Msa1269990 AT3G45610.1 60.494 81 30 1 22 102 32 110 8.82e-30 112
Msa1269990 AT2G37590.1 75.410 61 15 0 24 84 83 143 9.24e-30 114
Msa1269990 AT1G51700.1 64.103 78 25 2 27 101 30 107 1.61e-29 110
Msa1269990 AT5G65590.1 64.935 77 23 1 24 100 35 107 2.20e-29 113
Msa1269990 AT5G66940.1 74.138 58 15 0 27 84 29 86 1.96e-28 108
Msa1269990 AT3G52440.1 82.456 57 10 0 32 88 27 83 2.02e-28 109
Msa1269990 AT3G52440.2 82.456 57 10 0 32 88 46 102 2.35e-28 109
Msa1269990 AT3G50410.1 74.138 58 15 0 27 84 27 84 3.34e-28 108
Msa1269990 AT5G02460.1 67.647 68 22 0 17 84 82 149 3.51e-28 111
Msa1269990 AT5G60850.1 58.333 84 30 1 28 111 49 127 9.29e-28 108
Msa1269990 AT3G21270.1 53.125 96 24 1 30 104 29 124 1.07e-27 106
Msa1269990 AT2G28810.2 68.182 66 20 1 17 81 63 128 1.51e-27 108
Msa1269990 AT2G28810.1 68.182 66 20 1 17 81 80 145 1.93e-27 108
Msa1269990 AT1G07640.1 78.182 55 12 0 30 84 21 75 2.30e-27 107
Msa1269990 AT1G07640.2 78.182 55 12 0 30 84 77 131 2.40e-27 108
Msa1269990 AT4G38000.1 64.474 76 24 2 16 89 25 99 2.72e-27 106
Msa1269990 AT1G07640.3 78.182 55 12 0 30 84 85 139 2.73e-27 108
Msa1269990 AT1G28310.1 75.000 56 14 0 30 85 27 82 3.79e-27 107
Msa1269990 AT1G21340.1 71.212 66 16 1 22 84 27 92 4.42e-27 106
Msa1269990 AT1G28310.2 75.000 56 14 0 30 85 51 106 6.19e-27 107
Msa1269990 AT1G69570.1 70.312 64 19 0 25 88 127 190 1.90e-26 107
Msa1269990 AT5G62940.1 85.714 49 7 0 32 80 75 123 4.85e-26 105
Msa1269990 AT4G21050.1 68.852 61 19 0 25 85 19 79 8.92e-26 101
Msa1269990 AT1G29160.1 61.765 68 26 0 16 83 48 115 1.04e-25 100
Msa1269990 AT2G34140.1 58.108 74 31 0 10 83 38 111 1.17e-25 100
Msa1269990 AT1G47655.1 76.923 52 12 0 28 79 27 78 3.20e-25 99.8
Msa1269990 AT5G39660.3 61.972 71 25 1 13 83 123 191 6.44e-25 103
Msa1269990 AT5G39660.1 61.972 71 25 1 13 83 123 191 6.44e-25 103
Msa1269990 AT5G39660.2 61.972 71 25 1 13 83 123 191 6.44e-25 103
Msa1269990 AT3G47500.1 66.102 59 20 0 25 83 105 163 3.88e-24 101
Msa1269990 AT5G62430.1 64.407 59 21 0 25 83 49 107 5.04e-24 99.0
Msa1269990 AT1G26790.1 66.102 59 20 0 25 83 106 164 7.58e-24 99.4
Msa1269990 AT4G21040.1 75.000 52 13 0 32 83 27 78 1.07e-23 96.3
Msa1269990 AT4G21080.1 71.154 52 15 0 32 83 27 78 1.44e-22 94.0
Msa1269990 AT4G21030.1 58.000 50 21 0 32 81 23 72 2.61e-13 67.4

Find 80 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTGCCTTGGACATGAATT+AGG 0.219906 8_3:+3338897 None:intergenic
TAGAAGAATAGGTGAATATT+AGG 0.224079 8_3:-3337716 Msa1269990:three_prime_UTR
AGACAAATGATACCTATTAA+AGG 0.279065 8_3:+3338024 None:intergenic
TTCTTCTTTAAGAAGTATAT+TGG 0.301097 8_3:-3337654 Msa1269990:three_prime_UTR
AAGGAAATTCAACTGGATAT+TGG 0.307009 8_3:-3338164 Msa1269990:CDS
TCAAATGCTATTTATCCATC+TGG 0.339522 8_3:-3338378 Msa1269990:CDS
TGTTGGTTGAATTGCACCTT+GGG 0.364946 8_3:+3338835 None:intergenic
TTCTTCTCTAATCCTTGCCT+TGG 0.373577 8_3:+3338885 None:intergenic
GGATAAATAGCATTTGAGTT+TGG 0.376465 8_3:+3338384 None:intergenic
GAATTATTGTTATTAGCATA+AGG 0.380378 8_3:+3338414 None:intergenic
CATGTCTTGCAAAAGTATCT+TGG 0.386535 8_3:+3338774 None:intergenic
TTTAACTACTAACATAATAT+AGG 0.388806 8_3:+3337615 None:intergenic
AGTTGTTCAAAACTAACAAT+AGG 0.388982 8_3:-3337999 Msa1269990:three_prime_UTR
GCAAGACATGTAGAAGGTAT+TGG 0.389030 8_3:-3338761 Msa1269990:CDS
AAAGAAGAATTCATGAATAC+AGG 0.394951 8_3:+3337668 None:intergenic
TTGTATACAATTAATACCTT+TGG 0.396746 8_3:-3337783 Msa1269990:three_prime_UTR
ATGAAAGATGTGAAACTTGT+AGG 0.415991 8_3:+3338613 None:intergenic
AATTATTGTTATTAGCATAA+GGG 0.416837 8_3:+3338415 None:intergenic
CTTCAGCTCTTGACCTACTT+AGG 0.419947 8_3:-3338464 Msa1269990:CDS
CTTGTAGGGTTGGTGGATTT+AGG 0.422116 8_3:+3338628 None:intergenic
GATCAATGCACATGCACTAC+TGG 0.424715 8_3:-3337977 Msa1269990:three_prime_UTR
AGGGTTGGTGGATTTAGGTC+AGG 0.429516 8_3:+3338633 None:intergenic
GATCAACAAGGAAATTCAAC+TGG 0.430255 8_3:-3338171 Msa1269990:CDS
TTTCTTGAACCACCTCCAAC+AGG 0.434621 8_3:+3338711 None:intergenic
CAAGAAGGTGGTGGTGGTGG+TGG 0.441828 8_3:-3338270 Msa1269990:CDS
GAAAAGCTAGGTTAAGATCT+TGG 0.443847 8_3:+3338565 None:intergenic
ATGTAGAGGGATAGAAGAAT+AGG 0.444778 8_3:-3337727 Msa1269990:three_prime_UTR
GGGCAATTTATTTGCTCTTG+TGG 0.445979 8_3:+3338855 None:intergenic
CAAGAAGTTAAACCTAGTCT+TGG 0.453651 8_3:-3338345 Msa1269990:CDS
TATTATTAACATCTCCAAAT+GGG 0.464550 8_3:+3338235 None:intergenic
TTATTATTAACATCTCCAAA+TGG 0.464816 8_3:+3338234 None:intergenic
AGAAGAATAGGTGAATATTA+GGG 0.481225 8_3:-3337715 Msa1269990:three_prime_UTR
CTAAGAAATGTTCCTGTTGG+AGG 0.487652 8_3:-3338723 Msa1269990:CDS
GTTATGCATCTCAACATATG+AGG 0.495564 8_3:+3338503 None:intergenic
GTTCAAGAAGGTGGTGGTGG+TGG 0.497320 8_3:-3338273 Msa1269990:CDS
GAAAACTATCATCATAATCA+TGG 0.499028 8_3:-3338534 Msa1269990:CDS
TGTGAAACTTGTAGGGTTGG+TGG 0.499794 8_3:+3338621 None:intergenic
TGGATATTGGAATGGAATGA+TGG 0.500493 8_3:-3338151 Msa1269990:CDS
TGAATACAGGTTGCTTGCCA+TGG 0.505921 8_3:+3337681 None:intergenic
TCTCTAAGAAATGTTCCTGT+TGG 0.507663 8_3:-3338726 Msa1269990:CDS
TTCTACAAGTGGTGTTGAAG+TGG 0.514078 8_3:-3338205 Msa1269990:CDS
AATCAAGAGAAAGAAGTTGA+AGG 0.514653 8_3:-3338109 Msa1269990:three_prime_UTR
AGAAATGTTCCTGTTGGAGG+TGG 0.521904 8_3:-3338720 Msa1269990:CDS
ACTAGGTTTAACTTCTTGCA+TGG 0.527857 8_3:+3338350 None:intergenic
TGTAGAAGGTATTGGACTGA+AGG 0.537478 8_3:-3338753 Msa1269990:CDS
AATTCAACTGGATATTGGAA+TGG 0.543811 8_3:-3338159 Msa1269990:CDS
AATAAACAGCTTTCTACAAG+TGG 0.552575 8_3:-3338216 Msa1269990:CDS
GAATGATGGGTGAAGGATCA+TGG 0.555879 8_3:-3338137 Msa1269990:CDS
TAGGTATATATACTCATGGA+AGG 0.557450 8_3:-3338927 Msa1269990:CDS
TTTCCATAGATGGAAAAGCT+AGG 0.562893 8_3:+3338553 None:intergenic
ATGCCATGCTTGACCTAAGT+AGG 0.567095 8_3:+3338451 None:intergenic
GTGTTGGTTGAATTGCACCT+TGG 0.570819 8_3:+3338834 None:intergenic
GATATAGGTATATATACTCA+TGG 0.574218 8_3:-3338931 Msa1269990:intron
TCAATTGAAAATCCAAGACT+AGG 0.576773 8_3:+3338333 None:intergenic
TTAGGCGTGGCTAATGATGA+AGG 0.580360 8_3:+3338675 None:intergenic
TGATGAACTATTATTAGGCG+TGG 0.581046 8_3:+3338662 None:intergenic
TCTTGCATGGTGAATCCAGA+TGG 0.582527 8_3:+3338363 None:intergenic
CAAGTTCAAGAAGGTGGTGG+TGG 0.585887 8_3:-3338276 Msa1269990:CDS
GAGAAAGAAGTTGAAGGACA+AGG 0.587138 8_3:-3338103 Msa1269990:three_prime_UTR
AGATGTGAAACTTGTAGGGT+TGG 0.588666 8_3:+3338618 None:intergenic
TGAAAGATGTGAAACTTGTA+GGG 0.592727 8_3:+3338614 None:intergenic
TGCATCTCAACATATGAGGA+TGG 0.597529 8_3:+3338507 None:intergenic
TCTCAAAACCCTAAAATACA+AGG 0.599552 8_3:-3338591 Msa1269990:CDS
TGGAATGGAATGATGGGTGA+AGG 0.602503 8_3:-3338144 Msa1269990:CDS
GGATATTGGAATGGAATGAT+GGG 0.607936 8_3:-3338150 Msa1269990:CDS
GATCATGTTCAAGTTCAAGA+AGG 0.611680 8_3:-3338285 Msa1269990:CDS
TAGCTCCTAATTCATGTCCA+AGG 0.613211 8_3:-3338902 Msa1269990:CDS
CCTAATTCATGTCCAAGGCA+AGG 0.615681 8_3:-3338897 Msa1269990:CDS
AGAAGGTATTGGACTGAAGG+AGG 0.618740 8_3:-3338750 Msa1269990:CDS
GTTCAAGTTCAAGAAGGTGG+TGG 0.620240 8_3:-3338279 Msa1269990:CDS
AAGGATTAGAGAAGAAAGCA+AGG 0.621824 8_3:-3338878 Msa1269990:CDS
GTATTAATTTGAGTAATGTG+AGG 0.622347 8_3:-3337761 Msa1269990:three_prime_UTR
ATTACTCAAATTAATACCAA+AGG 0.625716 8_3:+3337767 None:intergenic
AGGTCAAGCATGGCATCTAG+AGG 0.626491 8_3:-3338444 Msa1269990:CDS
CATGTTCAAGTTCAAGAAGG+TGG 0.629706 8_3:-3338282 Msa1269990:CDS
TGACCTACTTAGGTCAAGCA+TGG 0.637135 8_3:-3338454 Msa1269990:CDS
AAGAGCAAATAAATTGCCCA+AGG 0.652747 8_3:-3338851 Msa1269990:CDS
AGGTATATATACTCATGGAA+GGG 0.656170 8_3:-3338926 Msa1269990:CDS
CAAAACCCTAAAATACAAGG+AGG 0.720797 8_3:-3338588 Msa1269990:CDS
GAACACAATAAAGATCAACA+AGG 0.746748 8_3:-3338183 Msa1269990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTAAGAAAAATATATTTA+AGG - chr8_3:3338020-3338039 Msa1269990:three_prime_UTR 10.0%
!!! TGTTATTTTTTAATATTTTG+AGG - chr8_3:3338223-3338242 Msa1269990:CDS 10.0%
!! AAAATAAAATGTAAATGATT+AGG + chr8_3:3338257-3338276 None:intergenic 10.0%
!! CATTAAGAAAAATATATTTA+AGG - chr8_3:3338020-3338039 Msa1269990:three_prime_UTR 10.0%
!!! TGTTATTTTTTAATATTTTG+AGG - chr8_3:3338223-3338242 Msa1269990:CDS 10.0%
!! AAAATAAAATGTAAATGATT+AGG + chr8_3:3338257-3338276 None:intergenic 10.0%
!! ACTTTATGAATGATATATAA+AGG + chr8_3:3337657-3337676 None:intergenic 15.0%
!!! ATTTTTCTTAATGAACATAT+AGG + chr8_3:3338013-3338032 None:intergenic 15.0%
!! ATATGAACATATATATAGAT+GGG + chr8_3:3338050-3338069 None:intergenic 15.0%
!! AATATGAACATATATATAGA+TGG + chr8_3:3338051-3338070 None:intergenic 15.0%
!!! ATTTTTGATGAACTATTATT+AGG + chr8_3:3338708-3338727 None:intergenic 15.0%
!!! AATTATTGTTATTAGCATAA+GGG + chr8_3:3338950-3338969 None:intergenic 15.0%
!!! ATTTTTTTTTCTCCTTTAAT+AGG - chr8_3:3339326-3339345 Msa1269990:intron 15.0%
!! TTTAACTACTAACATAATAT+AGG + chr8_3:3339750-3339769 None:intergenic 15.0%
!! ACTTTATGAATGATATATAA+AGG + chr8_3:3337657-3337676 None:intergenic 15.0%
!!! ATTTTTCTTAATGAACATAT+AGG + chr8_3:3338013-3338032 None:intergenic 15.0%
!! ATATGAACATATATATAGAT+GGG + chr8_3:3338050-3338069 None:intergenic 15.0%
!! AATATGAACATATATATAGA+TGG + chr8_3:3338051-3338070 None:intergenic 15.0%
!!! ATTTTTGATGAACTATTATT+AGG + chr8_3:3338708-3338727 None:intergenic 15.0%
!!! AATTATTGTTATTAGCATAA+GGG + chr8_3:3338950-3338969 None:intergenic 15.0%
!!! ATTTTTTTTTCTCCTTTAAT+AGG - chr8_3:3339326-3339345 Msa1269990:intron 15.0%
!! TTTAACTACTAACATAATAT+AGG + chr8_3:3339750-3339769 None:intergenic 15.0%
!! TTCTTATAGCTATTTATTCT+GGG - chr8_3:3337883-3337902 Msa1269990:three_prime_UTR 20.0%
!!! GATCAAAAATTTCCTTTTAT+TGG + chr8_3:3338097-3338116 None:intergenic 20.0%
!! AAATTATCATATGAGCAAAA+AGG + chr8_3:3338166-3338185 None:intergenic 20.0%
!! ATTGAATTATATGGTGAAAA+GGG + chr8_3:3338281-3338300 None:intergenic 20.0%
!! AATTGAATTATATGGTGAAA+AGG + chr8_3:3338282-3338301 None:intergenic 20.0%
!! ACTCAAACAATTGAATTATA+TGG + chr8_3:3338290-3338309 None:intergenic 20.0%
!!! ATGTTTGCATAACATATTTT+TGG + chr8_3:3338351-3338370 None:intergenic 20.0%
!!! GTAATAACAAAATTTTGTGT+TGG + chr8_3:3338547-3338566 None:intergenic 20.0%
!!! GAATTATTGTTATTAGCATA+AGG + chr8_3:3338951-3338970 None:intergenic 20.0%
!!! TTTTCAATTGATGGAATTAA+TGG - chr8_3:3339041-3339060 Msa1269990:intron 20.0%
!! TATTATTAACATCTCCAAAT+GGG + chr8_3:3339130-3339149 None:intergenic 20.0%
!! TTATTATTAACATCTCCAAA+TGG + chr8_3:3339131-3339150 None:intergenic 20.0%
!! TTGTATACAATTAATACCTT+TGG - chr8_3:3339579-3339598 Msa1269990:intron 20.0%
!! ATTACTCAAATTAATACCAA+AGG + chr8_3:3339598-3339617 None:intergenic 20.0%
!!! TTCTTCTTTAAGAAGTATAT+TGG - chr8_3:3339708-3339727 Msa1269990:intron 20.0%
!! TTCTTATAGCTATTTATTCT+GGG - chr8_3:3337883-3337902 Msa1269990:three_prime_UTR 20.0%
!!! GATCAAAAATTTCCTTTTAT+TGG + chr8_3:3338097-3338116 None:intergenic 20.0%
!! AAATTATCATATGAGCAAAA+AGG + chr8_3:3338166-3338185 None:intergenic 20.0%
!! ATTGAATTATATGGTGAAAA+GGG + chr8_3:3338281-3338300 None:intergenic 20.0%
!! AATTGAATTATATGGTGAAA+AGG + chr8_3:3338282-3338301 None:intergenic 20.0%
!! ACTCAAACAATTGAATTATA+TGG + chr8_3:3338290-3338309 None:intergenic 20.0%
!!! ATGTTTGCATAACATATTTT+TGG + chr8_3:3338351-3338370 None:intergenic 20.0%
!!! GTAATAACAAAATTTTGTGT+TGG + chr8_3:3338547-3338566 None:intergenic 20.0%
!!! GAATTATTGTTATTAGCATA+AGG + chr8_3:3338951-3338970 None:intergenic 20.0%
!!! TTTTCAATTGATGGAATTAA+TGG - chr8_3:3339041-3339060 Msa1269990:intron 20.0%
!! TATTATTAACATCTCCAAAT+GGG + chr8_3:3339130-3339149 None:intergenic 20.0%
!! TTATTATTAACATCTCCAAA+TGG + chr8_3:3339131-3339150 None:intergenic 20.0%
!! TTGTATACAATTAATACCTT+TGG - chr8_3:3339579-3339598 Msa1269990:intron 20.0%
!! ATTACTCAAATTAATACCAA+AGG + chr8_3:3339598-3339617 None:intergenic 20.0%
!!! TTCTTCTTTAAGAAGTATAT+TGG - chr8_3:3339708-3339727 Msa1269990:intron 20.0%
!!! ATGTTTTTGTTTTCGTTTGT+GGG + chr8_3:3337704-3337723 None:intergenic 25.0%
!!! AATGTTTTTGTTTTCGTTTG+TGG + chr8_3:3337705-3337724 None:intergenic 25.0%
! TTTAATTCATGACCAAAGAA+AGG - chr8_3:3337817-3337836 Msa1269990:three_prime_UTR 25.0%
! CTTCTTATAGCTATTTATTC+TGG - chr8_3:3337882-3337901 Msa1269990:three_prime_UTR 25.0%
!!! CTCTTTTTTCTACCAATAAA+AGG - chr8_3:3338082-3338101 Msa1269990:three_prime_UTR 25.0%
!! AAAGTTGAGTTTTTGATACT+AGG + chr8_3:3338124-3338143 None:intergenic 25.0%
!!! GCATAACATATTTTTGGATT+TGG + chr8_3:3338345-3338364 None:intergenic 25.0%
! GATATAGGTATATATACTCA+TGG - chr8_3:3338431-3338450 Msa1269990:CDS 25.0%
! GAAAACTATCATCATAATCA+TGG - chr8_3:3338828-3338847 Msa1269990:CDS 25.0%
! AGACAAATGATACCTATTAA+AGG + chr8_3:3339341-3339360 None:intergenic 25.0%
! AGTTGTTCAAAACTAACAAT+AGG - chr8_3:3339363-3339382 Msa1269990:intron 25.0%
!! GTATTAATTTGAGTAATGTG+AGG - chr8_3:3339601-3339620 Msa1269990:intron 25.0%
! TAGAAGAATAGGTGAATATT+AGG - chr8_3:3339646-3339665 Msa1269990:intron 25.0%
! AGAAGAATAGGTGAATATTA+GGG - chr8_3:3339647-3339666 Msa1269990:intron 25.0%
! AAAGAAGAATTCATGAATAC+AGG + chr8_3:3339697-3339716 None:intergenic 25.0%
!!! ATGTTTTTGTTTTCGTTTGT+GGG + chr8_3:3337704-3337723 None:intergenic 25.0%
!!! AATGTTTTTGTTTTCGTTTG+TGG + chr8_3:3337705-3337724 None:intergenic 25.0%
! TTTAATTCATGACCAAAGAA+AGG - chr8_3:3337817-3337836 Msa1269990:three_prime_UTR 25.0%
! CTTCTTATAGCTATTTATTC+TGG - chr8_3:3337882-3337901 Msa1269990:three_prime_UTR 25.0%
!!! CTCTTTTTTCTACCAATAAA+AGG - chr8_3:3338082-3338101 Msa1269990:three_prime_UTR 25.0%
!! AAAGTTGAGTTTTTGATACT+AGG + chr8_3:3338124-3338143 None:intergenic 25.0%
!!! GCATAACATATTTTTGGATT+TGG + chr8_3:3338345-3338364 None:intergenic 25.0%
! GATATAGGTATATATACTCA+TGG - chr8_3:3338431-3338450 Msa1269990:CDS 25.0%
! GAAAACTATCATCATAATCA+TGG - chr8_3:3338828-3338847 Msa1269990:CDS 25.0%
! AGACAAATGATACCTATTAA+AGG + chr8_3:3339341-3339360 None:intergenic 25.0%
! AGTTGTTCAAAACTAACAAT+AGG - chr8_3:3339363-3339382 Msa1269990:intron 25.0%
!! GTATTAATTTGAGTAATGTG+AGG - chr8_3:3339601-3339620 Msa1269990:intron 25.0%
! TAGAAGAATAGGTGAATATT+AGG - chr8_3:3339646-3339665 Msa1269990:intron 25.0%
! AGAAGAATAGGTGAATATTA+GGG - chr8_3:3339647-3339666 Msa1269990:intron 25.0%
! AAAGAAGAATTCATGAATAC+AGG + chr8_3:3339697-3339716 None:intergenic 25.0%
AAACATTCTTTCTTGCACTA+AGG - chr8_3:3337718-3337737 Msa1269990:three_prime_UTR 30.0%
!!! TTCATTTTCTAGCTATACCT+AGG - chr8_3:3337985-3338004 Msa1269990:three_prime_UTR 30.0%
TAATGAACATATAGGAACCT+AGG + chr8_3:3338005-3338024 None:intergenic 30.0%
TGAACATATATATAGATGGG+TGG + chr8_3:3338047-3338066 None:intergenic 30.0%
AAAGGTAAAGAGAAAGGAAA+AGG + chr8_3:3338148-3338167 None:intergenic 30.0%
TAGGTATATATACTCATGGA+AGG - chr8_3:3338435-3338454 Msa1269990:CDS 30.0%
AGGTATATATACTCATGGAA+GGG - chr8_3:3338436-3338455 Msa1269990:CDS 30.0%
TGAAAGATGTGAAACTTGTA+GGG + chr8_3:3338751-3338770 None:intergenic 30.0%
ATGAAAGATGTGAAACTTGT+AGG + chr8_3:3338752-3338771 None:intergenic 30.0%
TCTCAAAACCCTAAAATACA+AGG - chr8_3:3338771-3338790 Msa1269990:CDS 30.0%
! TGATGATAGTTTTCCATAGA+TGG + chr8_3:3338822-3338841 None:intergenic 30.0%
! GGATAAATAGCATTTGAGTT+TGG + chr8_3:3338981-3339000 None:intergenic 30.0%
! TCAAATGCTATTTATCCATC+TGG - chr8_3:3338984-3339003 Msa1269990:intron 30.0%
TCAATTGAAAATCCAAGACT+AGG + chr8_3:3339032-3339051 None:intergenic 30.0%
! AGTCTTGGATTTTCAATTGA+TGG - chr8_3:3339032-3339051 Msa1269990:intron 30.0%
AATAAACAGCTTTCTACAAG+TGG - chr8_3:3339146-3339165 Msa1269990:intron 30.0%
GAACACAATAAAGATCAACA+AGG - chr8_3:3339179-3339198 Msa1269990:intron 30.0%
AAGGAAATTCAACTGGATAT+TGG - chr8_3:3339198-3339217 Msa1269990:intron 30.0%
AATTCAACTGGATATTGGAA+TGG - chr8_3:3339203-3339222 Msa1269990:intron 30.0%
AATCAAGAGAAAGAAGTTGA+AGG - chr8_3:3339253-3339272 Msa1269990:intron 30.0%
! AGGATTGTTTTCATATGTAG+AGG - chr8_3:3339621-3339640 Msa1269990:intron 30.0%
! GGATTGTTTTCATATGTAGA+GGG - chr8_3:3339622-3339641 Msa1269990:intron 30.0%
AAACATTCTTTCTTGCACTA+AGG - chr8_3:3337718-3337737 Msa1269990:three_prime_UTR 30.0%
!!! TTCATTTTCTAGCTATACCT+AGG - chr8_3:3337985-3338004 Msa1269990:three_prime_UTR 30.0%
TAATGAACATATAGGAACCT+AGG + chr8_3:3338005-3338024 None:intergenic 30.0%
TGAACATATATATAGATGGG+TGG + chr8_3:3338047-3338066 None:intergenic 30.0%
AAAGGTAAAGAGAAAGGAAA+AGG + chr8_3:3338148-3338167 None:intergenic 30.0%
TAGGTATATATACTCATGGA+AGG - chr8_3:3338435-3338454 Msa1269990:CDS 30.0%
AGGTATATATACTCATGGAA+GGG - chr8_3:3338436-3338455 Msa1269990:CDS 30.0%
TGAAAGATGTGAAACTTGTA+GGG + chr8_3:3338751-3338770 None:intergenic 30.0%
ATGAAAGATGTGAAACTTGT+AGG + chr8_3:3338752-3338771 None:intergenic 30.0%
TCTCAAAACCCTAAAATACA+AGG - chr8_3:3338771-3338790 Msa1269990:CDS 30.0%
! TGATGATAGTTTTCCATAGA+TGG + chr8_3:3338822-3338841 None:intergenic 30.0%
! GGATAAATAGCATTTGAGTT+TGG + chr8_3:3338981-3339000 None:intergenic 30.0%
! TCAAATGCTATTTATCCATC+TGG - chr8_3:3338984-3339003 Msa1269990:intron 30.0%
TCAATTGAAAATCCAAGACT+AGG + chr8_3:3339032-3339051 None:intergenic 30.0%
! AGTCTTGGATTTTCAATTGA+TGG - chr8_3:3339032-3339051 Msa1269990:intron 30.0%
AATAAACAGCTTTCTACAAG+TGG - chr8_3:3339146-3339165 Msa1269990:intron 30.0%
GAACACAATAAAGATCAACA+AGG - chr8_3:3339179-3339198 Msa1269990:intron 30.0%
AAGGAAATTCAACTGGATAT+TGG - chr8_3:3339198-3339217 Msa1269990:intron 30.0%
AATTCAACTGGATATTGGAA+TGG - chr8_3:3339203-3339222 Msa1269990:intron 30.0%
AATCAAGAGAAAGAAGTTGA+AGG - chr8_3:3339253-3339272 Msa1269990:intron 30.0%
! AGGATTGTTTTCATATGTAG+AGG - chr8_3:3339621-3339640 Msa1269990:intron 30.0%
! GGATTGTTTTCATATGTAGA+GGG - chr8_3:3339622-3339641 Msa1269990:intron 30.0%
AAAAGCAAAGAGAGAGAAAG+AGG + chr8_3:3337780-3337799 None:intergenic 35.0%
AATTCATGACCAAAGAAAGG+TGG - chr8_3:3337820-3337839 Msa1269990:three_prime_UTR 35.0%
AATCCATATCCACCTTTCTT+TGG + chr8_3:3337832-3337851 None:intergenic 35.0%
AGCTATTTATTCTGGGTTTG+AGG - chr8_3:3337890-3337909 Msa1269990:three_prime_UTR 35.0%
GCTATTTATTCTGGGTTTGA+GGG - chr8_3:3337891-3337910 Msa1269990:three_prime_UTR 35.0%
GAGCAAAAAGGTAAAGAGAA+AGG + chr8_3:3338154-3338173 None:intergenic 35.0%
GGATTCATGTCACATGATAT+AGG - chr8_3:3338416-3338435 Msa1269990:CDS 35.0%
AAGGATTAGAGAAGAAAGCA+AGG - chr8_3:3338484-3338503 Msa1269990:CDS 35.0%
AAGAGCAAATAAATTGCCCA+AGG - chr8_3:3338511-3338530 Msa1269990:CDS 35.0%
!! CATGTCTTGCAAAAGTATCT+TGG + chr8_3:3338591-3338610 None:intergenic 35.0%
! ACTTTTGCAAGACATGTAGA+AGG - chr8_3:3338595-3338614 Msa1269990:CDS 35.0%
! TCTCTAAGAAATGTTCCTGT+TGG - chr8_3:3338636-3338655 Msa1269990:CDS 35.0%
TGATGAACTATTATTAGGCG+TGG + chr8_3:3338703-3338722 None:intergenic 35.0%
CAAAACCCTAAAATACAAGG+AGG - chr8_3:3338774-3338793 Msa1269990:CDS 35.0%
GAAAAGCTAGGTTAAGATCT+TGG + chr8_3:3338800-3338819 None:intergenic 35.0%
!! TAACCTAGCTTTTCCATCTA+TGG - chr8_3:3338806-3338825 Msa1269990:CDS 35.0%
TTTCCATAGATGGAAAAGCT+AGG + chr8_3:3338812-3338831 None:intergenic 35.0%
GTTATGCATCTCAACATATG+AGG + chr8_3:3338862-3338881 None:intergenic 35.0%
! ACTAGGTTTAACTTCTTGCA+TGG + chr8_3:3339015-3339034 None:intergenic 35.0%
CAAGAAGTTAAACCTAGTCT+TGG - chr8_3:3339017-3339036 Msa1269990:intron 35.0%
! GATCATGTTCAAGTTCAAGA+AGG - chr8_3:3339077-3339096 Msa1269990:intron 35.0%
GATCAACAAGGAAATTCAAC+TGG - chr8_3:3339191-3339210 Msa1269990:intron 35.0%
TGGATATTGGAATGGAATGA+TGG - chr8_3:3339211-3339230 Msa1269990:intron 35.0%
GGATATTGGAATGGAATGAT+GGG - chr8_3:3339212-3339231 Msa1269990:intron 35.0%
ACATGCACTACTGGAAAAAT+TGG - chr8_3:3339394-3339413 Msa1269990:intron 35.0%
ATGTAGAGGGATAGAAGAAT+AGG - chr8_3:3339635-3339654 Msa1269990:intron 35.0%
!!! TTAGGGATTGTTTTTGTCCA+TGG - chr8_3:3339664-3339683 Msa1269990:intron 35.0%
AAAAGCAAAGAGAGAGAAAG+AGG + chr8_3:3337780-3337799 None:intergenic 35.0%
AATTCATGACCAAAGAAAGG+TGG - chr8_3:3337820-3337839 Msa1269990:three_prime_UTR 35.0%
AATCCATATCCACCTTTCTT+TGG + chr8_3:3337832-3337851 None:intergenic 35.0%
AGCTATTTATTCTGGGTTTG+AGG - chr8_3:3337890-3337909 Msa1269990:three_prime_UTR 35.0%
GCTATTTATTCTGGGTTTGA+GGG - chr8_3:3337891-3337910 Msa1269990:three_prime_UTR 35.0%
GAGCAAAAAGGTAAAGAGAA+AGG + chr8_3:3338154-3338173 None:intergenic 35.0%
GGATTCATGTCACATGATAT+AGG - chr8_3:3338416-3338435 Msa1269990:CDS 35.0%
AAGGATTAGAGAAGAAAGCA+AGG - chr8_3:3338484-3338503 Msa1269990:CDS 35.0%
AAGAGCAAATAAATTGCCCA+AGG - chr8_3:3338511-3338530 Msa1269990:CDS 35.0%
!! CATGTCTTGCAAAAGTATCT+TGG + chr8_3:3338591-3338610 None:intergenic 35.0%
! ACTTTTGCAAGACATGTAGA+AGG - chr8_3:3338595-3338614 Msa1269990:CDS 35.0%
! TCTCTAAGAAATGTTCCTGT+TGG - chr8_3:3338636-3338655 Msa1269990:CDS 35.0%
TGATGAACTATTATTAGGCG+TGG + chr8_3:3338703-3338722 None:intergenic 35.0%
CAAAACCCTAAAATACAAGG+AGG - chr8_3:3338774-3338793 Msa1269990:CDS 35.0%
GAAAAGCTAGGTTAAGATCT+TGG + chr8_3:3338800-3338819 None:intergenic 35.0%
!! TAACCTAGCTTTTCCATCTA+TGG - chr8_3:3338806-3338825 Msa1269990:CDS 35.0%
TTTCCATAGATGGAAAAGCT+AGG + chr8_3:3338812-3338831 None:intergenic 35.0%
GTTATGCATCTCAACATATG+AGG + chr8_3:3338862-3338881 None:intergenic 35.0%
! ACTAGGTTTAACTTCTTGCA+TGG + chr8_3:3339015-3339034 None:intergenic 35.0%
CAAGAAGTTAAACCTAGTCT+TGG - chr8_3:3339017-3339036 Msa1269990:intron 35.0%
! GATCATGTTCAAGTTCAAGA+AGG - chr8_3:3339077-3339096 Msa1269990:intron 35.0%
GATCAACAAGGAAATTCAAC+TGG - chr8_3:3339191-3339210 Msa1269990:intron 35.0%
TGGATATTGGAATGGAATGA+TGG - chr8_3:3339211-3339230 Msa1269990:intron 35.0%
GGATATTGGAATGGAATGAT+GGG - chr8_3:3339212-3339231 Msa1269990:intron 35.0%
ACATGCACTACTGGAAAAAT+TGG - chr8_3:3339394-3339413 Msa1269990:intron 35.0%
ATGTAGAGGGATAGAAGAAT+AGG - chr8_3:3339635-3339654 Msa1269990:intron 35.0%
!!! TTAGGGATTGTTTTTGTCCA+TGG - chr8_3:3339664-3339683 Msa1269990:intron 35.0%
! TGCAGTCTTGTAGACATACA+AGG - chr8_3:3337749-3337768 Msa1269990:three_prime_UTR 40.0%
TGACCAAAGAAAGGTGGATA+TGG - chr8_3:3337826-3337845 Msa1269990:three_prime_UTR 40.0%
! GTTGATAGATGTGTCAGCTT+TGG + chr8_3:3337922-3337941 None:intergenic 40.0%
TAGCTCCTAATTCATGTCCA+AGG - chr8_3:3338460-3338479 Msa1269990:CDS 40.0%
TTCTTCTCTAATCCTTGCCT+TGG + chr8_3:3338480-3338499 None:intergenic 40.0%
GGGCAATTTATTTGCTCTTG+TGG + chr8_3:3338510-3338529 None:intergenic 40.0%
! TGTTGGTTGAATTGCACCTT+GGG + chr8_3:3338530-3338549 None:intergenic 40.0%
! GCAAGACATGTAGAAGGTAT+TGG - chr8_3:3338601-3338620 Msa1269990:CDS 40.0%
!! TGTAGAAGGTATTGGACTGA+AGG - chr8_3:3338609-3338628 Msa1269990:CDS 40.0%
CTAAGAAATGTTCCTGTTGG+AGG - chr8_3:3338639-3338658 Msa1269990:CDS 40.0%
AGATGTGAAACTTGTAGGGT+TGG + chr8_3:3338747-3338766 None:intergenic 40.0%
! CTTGGCCTCCTTGTATTTTA+GGG + chr8_3:3338782-3338801 None:intergenic 40.0%
! TCTTGGCCTCCTTGTATTTT+AGG + chr8_3:3338783-3338802 None:intergenic 40.0%
TGCATCTCAACATATGAGGA+TGG + chr8_3:3338858-3338877 None:intergenic 40.0%
! CATGTTCAAGTTCAAGAAGG+TGG - chr8_3:3339080-3339099 Msa1269990:intron 40.0%
! GGAAGACTTTTGTTCCCATT+TGG - chr8_3:3339113-3339132 Msa1269990:intron 40.0%
! TTCTACAAGTGGTGTTGAAG+TGG - chr8_3:3339157-3339176 Msa1269990:intron 40.0%
GAGAAAGAAGTTGAAGGACA+AGG - chr8_3:3339259-3339278 Msa1269990:intron 40.0%
!!! CTGTTTTGACTACACAAGCA+TGG + chr8_3:3337597-3337616 None:intergenic 40.0%
! TGCAGTCTTGTAGACATACA+AGG - chr8_3:3337749-3337768 Msa1269990:three_prime_UTR 40.0%
TGACCAAAGAAAGGTGGATA+TGG - chr8_3:3337826-3337845 Msa1269990:three_prime_UTR 40.0%
! GTTGATAGATGTGTCAGCTT+TGG + chr8_3:3337922-3337941 None:intergenic 40.0%
TAGCTCCTAATTCATGTCCA+AGG - chr8_3:3338460-3338479 Msa1269990:CDS 40.0%
TTCTTCTCTAATCCTTGCCT+TGG + chr8_3:3338480-3338499 None:intergenic 40.0%
GGGCAATTTATTTGCTCTTG+TGG + chr8_3:3338510-3338529 None:intergenic 40.0%
! TGTTGGTTGAATTGCACCTT+GGG + chr8_3:3338530-3338549 None:intergenic 40.0%
! GCAAGACATGTAGAAGGTAT+TGG - chr8_3:3338601-3338620 Msa1269990:CDS 40.0%
!! TGTAGAAGGTATTGGACTGA+AGG - chr8_3:3338609-3338628 Msa1269990:CDS 40.0%
CTAAGAAATGTTCCTGTTGG+AGG - chr8_3:3338639-3338658 Msa1269990:CDS 40.0%
AGATGTGAAACTTGTAGGGT+TGG + chr8_3:3338747-3338766 None:intergenic 40.0%
! CTTGGCCTCCTTGTATTTTA+GGG + chr8_3:3338782-3338801 None:intergenic 40.0%
! TCTTGGCCTCCTTGTATTTT+AGG + chr8_3:3338783-3338802 None:intergenic 40.0%
TGCATCTCAACATATGAGGA+TGG + chr8_3:3338858-3338877 None:intergenic 40.0%
! CATGTTCAAGTTCAAGAAGG+TGG - chr8_3:3339080-3339099 Msa1269990:intron 40.0%
! GGAAGACTTTTGTTCCCATT+TGG - chr8_3:3339113-3339132 Msa1269990:intron 40.0%
! TTCTACAAGTGGTGTTGAAG+TGG - chr8_3:3339157-3339176 Msa1269990:intron 40.0%
GAGAAAGAAGTTGAAGGACA+AGG - chr8_3:3339259-3339278 Msa1269990:intron 40.0%
TTTCTTGCACTAAGGAGAGC+AGG - chr8_3:3337726-3337745 Msa1269990:three_prime_UTR 45.0%
CCTTGCCTTGGACATGAATT+AGG + chr8_3:3338468-3338487 None:intergenic 45.0%
CCTAATTCATGTCCAAGGCA+AGG - chr8_3:3338465-3338484 Msa1269990:CDS 45.0%
!! GTGTTGGTTGAATTGCACCT+TGG + chr8_3:3338531-3338550 None:intergenic 45.0%
!! AGAAGGTATTGGACTGAAGG+AGG - chr8_3:3338612-3338631 Msa1269990:CDS 45.0%
AGAAATGTTCCTGTTGGAGG+TGG - chr8_3:3338642-3338661 Msa1269990:CDS 45.0%
TTTCTTGAACCACCTCCAAC+AGG + chr8_3:3338654-3338673 None:intergenic 45.0%
TTAGGCGTGGCTAATGATGA+AGG + chr8_3:3338690-3338709 None:intergenic 45.0%
!! CTTGTAGGGTTGGTGGATTT+AGG + chr8_3:3338737-3338756 None:intergenic 45.0%
TGTGAAACTTGTAGGGTTGG+TGG + chr8_3:3338744-3338763 None:intergenic 45.0%
CTTCAGCTCTTGACCTACTT+AGG - chr8_3:3338898-3338917 Msa1269990:CDS 45.0%
TGACCTACTTAGGTCAAGCA+TGG - chr8_3:3338908-3338927 Msa1269990:CDS 45.0%
ATGCCATGCTTGACCTAAGT+AGG + chr8_3:3338914-3338933 None:intergenic 45.0%
TCTTGCATGGTGAATCCAGA+TGG + chr8_3:3339002-3339021 None:intergenic 45.0%
! GTTCAAGTTCAAGAAGGTGG+TGG - chr8_3:3339083-3339102 Msa1269990:intron 45.0%
!! TGGAATGGAATGATGGGTGA+AGG - chr8_3:3339218-3339237 Msa1269990:intron 45.0%
!! GAATGATGGGTGAAGGATCA+TGG - chr8_3:3339225-3339244 Msa1269990:intron 45.0%
GATCAATGCACATGCACTAC+TGG - chr8_3:3339385-3339404 Msa1269990:intron 45.0%
TGAATACAGGTTGCTTGCCA+TGG + chr8_3:3339684-3339703 None:intergenic 45.0%
TTTCTTGCACTAAGGAGAGC+AGG - chr8_3:3337726-3337745 Msa1269990:three_prime_UTR 45.0%
CCTTGCCTTGGACATGAATT+AGG + chr8_3:3338468-3338487 None:intergenic 45.0%
CCTAATTCATGTCCAAGGCA+AGG - chr8_3:3338465-3338484 Msa1269990:CDS 45.0%
!! GTGTTGGTTGAATTGCACCT+TGG + chr8_3:3338531-3338550 None:intergenic 45.0%
!! AGAAGGTATTGGACTGAAGG+AGG - chr8_3:3338612-3338631 Msa1269990:CDS 45.0%
AGAAATGTTCCTGTTGGAGG+TGG - chr8_3:3338642-3338661 Msa1269990:CDS 45.0%
TTTCTTGAACCACCTCCAAC+AGG + chr8_3:3338654-3338673 None:intergenic 45.0%
TTAGGCGTGGCTAATGATGA+AGG + chr8_3:3338690-3338709 None:intergenic 45.0%
!! CTTGTAGGGTTGGTGGATTT+AGG + chr8_3:3338737-3338756 None:intergenic 45.0%
TGTGAAACTTGTAGGGTTGG+TGG + chr8_3:3338744-3338763 None:intergenic 45.0%
CTTCAGCTCTTGACCTACTT+AGG - chr8_3:3338898-3338917 Msa1269990:CDS 45.0%
TGACCTACTTAGGTCAAGCA+TGG - chr8_3:3338908-3338927 Msa1269990:CDS 45.0%
ATGCCATGCTTGACCTAAGT+AGG + chr8_3:3338914-3338933 None:intergenic 45.0%
TCTTGCATGGTGAATCCAGA+TGG + chr8_3:3339002-3339021 None:intergenic 45.0%
! GTTCAAGTTCAAGAAGGTGG+TGG - chr8_3:3339083-3339102 Msa1269990:intron 45.0%
!! TGGAATGGAATGATGGGTGA+AGG - chr8_3:3339218-3339237 Msa1269990:intron 45.0%
!! GAATGATGGGTGAAGGATCA+TGG - chr8_3:3339225-3339244 Msa1269990:intron 45.0%
GATCAATGCACATGCACTAC+TGG - chr8_3:3339385-3339404 Msa1269990:intron 45.0%
TGAATACAGGTTGCTTGCCA+TGG + chr8_3:3339684-3339703 None:intergenic 45.0%
!!! TTTTATATATTTATATTCTA+TGG - chr8_3:3338395-3338414 Msa1269990:CDS 5.0%
!!! TACTAAAAAAAATAAATTTT+AGG + chr8_3:3339540-3339559 None:intergenic 5.0%
!!! TTTTATATATTTATATTCTA+TGG - chr8_3:3338395-3338414 Msa1269990:CDS 5.0%
!!! TACTAAAAAAAATAAATTTT+AGG + chr8_3:3339540-3339559 None:intergenic 5.0%
!! AGGGTTGGTGGATTTAGGTC+AGG + chr8_3:3338732-3338751 None:intergenic 50.0%
AGGTCAAGCATGGCATCTAG+AGG - chr8_3:3338918-3338937 Msa1269990:CDS 50.0%
! CAAGTTCAAGAAGGTGGTGG+TGG - chr8_3:3339086-3339105 Msa1269990:intron 50.0%
!! AGGGTTGGTGGATTTAGGTC+AGG + chr8_3:3338732-3338751 None:intergenic 50.0%
AGGTCAAGCATGGCATCTAG+AGG - chr8_3:3338918-3338937 Msa1269990:CDS 50.0%
! CAAGTTCAAGAAGGTGGTGG+TGG - chr8_3:3339086-3339105 Msa1269990:intron 50.0%
!! GTTCAAGAAGGTGGTGGTGG+TGG - chr8_3:3339089-3339108 Msa1269990:intron 55.0%
!! GTTCAAGAAGGTGGTGGTGG+TGG - chr8_3:3339089-3339108 Msa1269990:intron 55.0%
!! CAAGAAGGTGGTGGTGGTGG+TGG - chr8_3:3339092-3339111 Msa1269990:intron 60.0%
!! CAAGAAGGTGGTGGTGGTGG+TGG - chr8_3:3339092-3339111 Msa1269990:intron 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 3337596 3339788 3337596 ID=Msa1269990;Name=Msa1269990
chr8_3 mRNA 3337596 3339788 3337596 ID=Msa1269990-mRNA-1;Parent=Msa1269990;Name=Msa1269990-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0.5|1|0|0|2|538|272
chr8_3 exon 3337596 3338946 3337596 ID=Msa1269990-mRNA-1:exon:1076;Parent=Msa1269990-mRNA-1
chr8_3 exon 3339783 3339788 3339783 ID=Msa1269990-mRNA-1:exon:1075;Parent=Msa1269990-mRNA-1
chr8_3 CDS 3339783 3339788 3339783 ID=Msa1269990-mRNA-1:cds;Parent=Msa1269990-mRNA-1
chr8_3 CDS 3338134 3338946 3338134 ID=Msa1269990-mRNA-1:cds;Parent=Msa1269990-mRNA-1
chr8_3 three_prime_UTR 3337596 3338133 3337596 ID=Msa1269990-mRNA-1:three_prime_utr;Parent=Msa1269990-mRNA-1
Gene Sequence

>Msa1269990

ATGCTTGTATATATACTCATGGAAGGGTTAGCTCCTAATTCATGTCCAAGGCAAGGATTAGAGAAGAAAGCAAGGCCACAAGAGCAAATAAATTGCCCAAGGTGCAATTCAACCAACACAAAATTTTGTTATTACAACAACTACAGTCTCACACAACCAAGATACTTTTGCAAGACATGTAGAAGGTATTGGACTGAAGGAGGATCTCTAAGAAATGTTCCTGTTGGAGGTGGTTCAAGAAAGAACAAGAAAATTCCTTCATCATTAGCCACGCCTAATAATAGTTCATCAAAAATTCCTGACCTAAATCCACCAACCCTACAAGTTTCACATCTTTCATCTCAAAACCCTAAAATACAAGGAGGCCAAGATCTTAACCTAGCTTTTCCATCTATGGAAAACTATCATCATAATCATGGTATGCCATCCTCATATGTTGAGATGCATAACAATAATGAATCATCTTCTTCAGCTCTTGACCTACTTAGGTCAAGCATGGCATCTAGAGGCATAAACCCTTATGCTAATAACAATAATTCTTTGATGCCAAACTCAAATGCTATTTATCCATCTGGATTCACCATGCAAGAAGTTAAACCTAGTCTTGGATTTTCAATTGATGGAATTAATGGAAATAGATCATATGATCATGTTCAAGTTCAAGAAGGTGGTGGTGGTGGTGGAAGACTTTTGTTCCCATTTGGAGATGTTAATAATAAACAGCTTTCTACAAGTGGTGTTGAAGTGGAACACAATAAAGATCAACAAGGAAATTCAACTGGATATTGGAATGGAATGATGGGTGAAGGATCATGGTAA
Protein sequence

>Msa1269990

MLVYILMEGLAPNSCPRQGLEKKARPQEQINCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKIPSSLATPNNSSSKIPDLNPPTLQVSHLSSQNPKIQGGQDLNLAFPSMENYHHNHGMPSSYVEMHNNNESSSSALDLLRSSMASRGINPYANNNNSLMPNSNAIYPSGFTMQEVKPSLGFSIDGINGNRSYDHVQVQEGGGGGGRLLFPFGDVNNKQLSTSGVEVEHNKDQQGNSTGYWNGMMGEGSW*