Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272750 | XP_013444048.1 | 98.429 | 382 | 6 | 0 | 1 | 382 | 1 | 382 | 0.0 | 782 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272750 | sp|Q9LKJ1|HIBC1_ARATH | 66.845 | 374 | 121 | 2 | 9 | 382 | 8 | 378 | 0.0 | 541 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272750 | A0A072TX02 | 98.429 | 382 | 6 | 0 | 1 | 382 | 1 | 382 | 0.0 | 782 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1272750 | Msa1450870 | 0.891743 | 3.004694e-74 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272750 | MtrunA17_Chr8g0337981 | 98.429 | 382 | 6 | 0 | 1 | 382 | 1 | 382 | 0.0 | 782 |
| Msa1272750 | MtrunA17_Chr8g0334701 | 46.154 | 364 | 195 | 1 | 7 | 370 | 33 | 395 | 8.77e-113 | 335 |
| Msa1272750 | MtrunA17_Chr1g0150221 | 46.398 | 347 | 186 | 0 | 9 | 355 | 42 | 388 | 2.45e-110 | 329 |
| Msa1272750 | MtrunA17_Chr3g0095921 | 43.514 | 370 | 204 | 3 | 1 | 369 | 1 | 366 | 1.97e-100 | 303 |
| Msa1272750 | MtrunA17_Chr8g0390721 | 36.034 | 358 | 207 | 10 | 22 | 360 | 58 | 412 | 3.21e-59 | 197 |
| Msa1272750 | MtrunA17_Chr3g0122861 | 31.461 | 178 | 114 | 3 | 17 | 188 | 16 | 191 | 1.51e-14 | 73.2 |
| Msa1272750 | MtrunA17_Chr4g0068451 | 29.947 | 187 | 122 | 4 | 12 | 196 | 7 | 186 | 6.33e-14 | 71.2 |
| Msa1272750 | MtrunA17_Chr4g0055741 | 25.698 | 179 | 125 | 4 | 23 | 198 | 57 | 230 | 1.39e-12 | 67.8 |
| Msa1272750 | MtrunA17_Chr8g0365881 | 28.671 | 143 | 96 | 3 | 23 | 163 | 81 | 219 | 4.43e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272750 | AT5G65940.1 | 66.845 | 374 | 121 | 2 | 9 | 382 | 8 | 378 | 0.0 | 541 |
| Msa1272750 | AT5G65940.4 | 66.845 | 374 | 121 | 2 | 9 | 382 | 8 | 378 | 0.0 | 541 |
| Msa1272750 | AT5G65940.3 | 69.512 | 328 | 100 | 0 | 9 | 336 | 8 | 335 | 1.52e-179 | 502 |
| Msa1272750 | AT2G30660.1 | 66.474 | 346 | 116 | 0 | 9 | 354 | 4 | 349 | 4.41e-179 | 503 |
| Msa1272750 | AT2G30650.1 | 64.690 | 371 | 129 | 2 | 11 | 380 | 6 | 375 | 9.59e-179 | 502 |
| Msa1272750 | AT5G65940.2 | 68.012 | 322 | 103 | 0 | 8 | 329 | 7 | 328 | 2.97e-170 | 478 |
| Msa1272750 | AT2G30660.2 | 65.615 | 317 | 109 | 0 | 38 | 354 | 1 | 317 | 1.20e-161 | 457 |
| Msa1272750 | AT2G30650.2 | 64.127 | 315 | 113 | 0 | 8 | 322 | 3 | 317 | 1.37e-149 | 426 |
| Msa1272750 | AT4G31810.1 | 45.245 | 347 | 190 | 0 | 9 | 355 | 40 | 386 | 3.70e-107 | 321 |
| Msa1272750 | AT3G60510.1 | 47.383 | 363 | 190 | 1 | 11 | 373 | 38 | 399 | 8.97e-106 | 317 |
| Msa1272750 | AT3G60510.3 | 44.560 | 386 | 188 | 2 | 11 | 371 | 38 | 422 | 3.48e-100 | 304 |
| Msa1272750 | AT1G06550.1 | 43.052 | 367 | 206 | 2 | 7 | 373 | 8 | 371 | 4.60e-100 | 302 |
| Msa1272750 | AT3G60510.2 | 47.653 | 277 | 145 | 0 | 11 | 287 | 38 | 314 | 3.65e-80 | 249 |
| Msa1272750 | AT3G24360.2 | 36.212 | 359 | 201 | 12 | 22 | 360 | 58 | 408 | 1.81e-61 | 203 |
| Msa1272750 | AT4G13360.1 | 36.565 | 361 | 201 | 12 | 22 | 360 | 61 | 415 | 2.61e-61 | 203 |
| Msa1272750 | AT3G24360.1 | 35.833 | 360 | 205 | 12 | 22 | 360 | 58 | 412 | 2.53e-59 | 198 |
| Msa1272750 | AT3G24360.3 | 36.111 | 288 | 160 | 10 | 92 | 360 | 26 | 308 | 3.82e-48 | 166 |
| Msa1272750 | AT3G24360.6 | 36.111 | 288 | 160 | 10 | 92 | 360 | 5 | 287 | 4.03e-48 | 165 |
| Msa1272750 | AT3G24360.5 | 36.111 | 288 | 160 | 10 | 92 | 360 | 28 | 310 | 4.92e-48 | 166 |
| Msa1272750 | AT3G24360.4 | 38.224 | 259 | 150 | 9 | 22 | 271 | 58 | 315 | 5.25e-42 | 150 |
| Msa1272750 | AT4G16210.1 | 26.941 | 219 | 147 | 5 | 7 | 219 | 5 | 216 | 7.05e-14 | 71.6 |
| Msa1272750 | AT5G43280.2 | 27.624 | 181 | 120 | 4 | 18 | 188 | 18 | 197 | 1.61e-11 | 63.9 |
| Msa1272750 | AT5G43280.1 | 27.624 | 181 | 120 | 4 | 18 | 188 | 18 | 197 | 3.40e-11 | 63.9 |
Find 98 sgRNAs with CRISPR-Local
Find 513 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGCTATTTCAAAGCTTTA+AGG | 0.111501 | 8_3:+6485048 | Msa1272750:CDS |
| ATAGCAGCACCCATCCATTT+TGG | 0.227060 | 8_3:+6477320 | Msa1272750:five_prime_UTR |
| ACTTAATGTTTGTGATTCTT+TGG | 0.236370 | 8_3:-6485109 | None:intergenic |
| ATCCTTAACAAGCTCCAATT+TGG | 0.248004 | 8_3:-6484938 | None:intergenic |
| GAGAGAGCATTCAATTGTTT+TGG | 0.250822 | 8_3:-6477593 | None:intergenic |
| TTGCAGGTTTCAATTCTTAA+TGG | 0.257914 | 8_3:+6480937 | Msa1272750:intron |
| GGAGAATATGTTGGTCTTAC+AGG | 0.259688 | 8_3:+6481942 | Msa1272750:intron |
| TATTAAAATTAAAATATTAC+TGG | 0.272905 | 8_3:-6477300 | None:intergenic |
| AACATTTATCAAATTCAATA+AGG | 0.286065 | 8_3:-6485324 | None:intergenic |
| AAATAATCCCAAAGCTGTTT+CGG | 0.303784 | 8_3:-6481424 | None:intergenic |
| GTCAATAATTGCAGATACTA+TGG | 0.328804 | 8_3:-6483711 | None:intergenic |
| TGCTATGCCCGAAACAGCTT+TGG | 0.328892 | 8_3:+6481416 | Msa1272750:CDS |
| AATAATCCCAAAGCTGTTTC+GGG | 0.332057 | 8_3:-6481423 | None:intergenic |
| ATTAGACAAGGCAGGCTCTT+AGG | 0.333895 | 8_3:+6484610 | Msa1272750:CDS |
| CCTTGCTATGGTGTCCTTGT+AGG | 0.349526 | 8_3:-6484678 | None:intergenic |
| GGCAAGTTGTTGAACCTCTT+GGG | 0.350616 | 8_3:-6485021 | None:intergenic |
| TTAGTGGGATCCTTCCAAAT+TGG | 0.352371 | 8_3:+6484924 | Msa1272750:intron |
| AACATTAAGTTGATTCTTGA+AGG | 0.357842 | 8_3:+6485122 | Msa1272750:three_prime_UTR |
| ATATAAAATGAATTATTTGA+TGG | 0.359065 | 8_3:+6480800 | Msa1272750:CDS |
| TTTCATATGGTATAGGTGAT+TGG | 0.369959 | 8_3:+6480748 | Msa1272750:intron |
| GGAAGAGGAAGGACCCAAAA+TGG | 0.387237 | 8_3:-6477334 | None:intergenic |
| GGTATAGGTGATTGGAGATT+TGG | 0.392868 | 8_3:+6480756 | Msa1272750:intron |
| TGTTAAATTGATTGTCCTAA+AGG | 0.399260 | 8_3:+6479027 | Msa1272750:CDS |
| TGCACAGAAATTATCGTCAT+TGG | 0.403375 | 8_3:+6483652 | Msa1272750:intron |
| TTCCAAATTGGAGCTTGTTA+AGG | 0.403393 | 8_3:+6484936 | Msa1272750:CDS |
| ATCGTCATGGGAGGTGGCGC+TGG | 0.407520 | 8_3:+6480961 | Msa1272750:CDS |
| AACCTGATCTTCATCCAGTT+TGG | 0.407756 | 8_3:-6477389 | None:intergenic |
| TGTCGGAGATGCTTTCTTCA+AGG | 0.412605 | 8_3:-6484271 | None:intergenic |
| GGTTACATTTATCAGGGAAA+TGG | 0.414501 | 8_3:+6479704 | Msa1272750:intron |
| TGCTGAAGGATGGAAAGATT+TGG | 0.418826 | 8_3:+6484993 | Msa1272750:CDS |
| TAATATGAGGCGCCTACATC+AGG | 0.422559 | 8_3:-6481447 | None:intergenic |
| TATTATTTGTCTAGACTAGC+TGG | 0.430192 | 8_3:+6481465 | Msa1272750:CDS |
| AGGACAATCAATTTAACATC+AGG | 0.430392 | 8_3:-6479022 | None:intergenic |
| GCTATGCCCGAAACAGCTTT+GGG | 0.440444 | 8_3:+6481417 | Msa1272750:CDS |
| TTTGGGTCCTTCCTCTTCCT+CGG | 0.454290 | 8_3:+6477338 | Msa1272750:five_prime_UTR |
| CGCCAAACTGGATGAAGATC+AGG | 0.455421 | 8_3:+6477387 | Msa1272750:CDS |
| AGGCAAGTTGTTGAACCTCT+TGG | 0.459879 | 8_3:-6485022 | None:intergenic |
| AGAGCAGCCTTCCCTAAAAC+AGG | 0.460836 | 8_3:+6483742 | Msa1272750:CDS |
| TGATCTTCATCCAGTTTGGC+GGG | 0.473292 | 8_3:-6477385 | None:intergenic |
| ATCTTCATCCAGTTTGGCGG+GGG | 0.486411 | 8_3:-6477383 | None:intergenic |
| TTATATAAGATCAACTTGTT+CGG | 0.495881 | 8_3:-6485171 | None:intergenic |
| CCATAGCAAGGATTTCTTCG+AGG | 0.511511 | 8_3:+6484690 | Msa1272750:CDS |
| AGTATGTAGCATACCGATGA+AGG | 0.512916 | 8_3:-6482020 | None:intergenic |
| CTTACAGGTGCTAGGTTGGA+TGG | 0.513409 | 8_3:+6481957 | Msa1272750:CDS |
| TTCTCTAAGCTTGATGCTGA+AGG | 0.514592 | 8_3:+6484979 | Msa1272750:CDS |
| CTGATCTTCATCCAGTTTGG+CGG | 0.518696 | 8_3:-6477386 | None:intergenic |
| AATGGAATCGTCATGGGAGG+TGG | 0.522285 | 8_3:+6480955 | Msa1272750:CDS |
| AATTCTTAATGGAATCGTCA+TGG | 0.523281 | 8_3:+6480948 | Msa1272750:CDS |
| TTGGGATTATTTCCTGATGT+AGG | 0.525045 | 8_3:+6481435 | Msa1272750:CDS |
| ATAATTGCAGATACTATGGC+TGG | 0.526109 | 8_3:-6483707 | None:intergenic |
| GTTGGTGAAGACCGAGGAAG+AGG | 0.528755 | 8_3:-6477349 | None:intergenic |
| GATCTTCATCCAGTTTGGCG+GGG | 0.533241 | 8_3:-6477384 | None:intergenic |
| CTATGAGTAAAGCAGATAGT+TGG | 0.533586 | 8_3:+6484229 | Msa1272750:CDS |
| ATTCTTAATGGAATCGTCAT+GGG | 0.537888 | 8_3:+6480949 | Msa1272750:CDS |
| TAGTCTAGACAAATAATATG+AGG | 0.540571 | 8_3:-6481460 | None:intergenic |
| GAGGAAGGACCCAAAATGGA+TGG | 0.542392 | 8_3:-6477330 | None:intergenic |
| GTGGATGTTAATTTCACCAA+AGG | 0.543624 | 8_3:-6485360 | None:intergenic |
| CTATACTGATAGATAAAGAC+AGG | 0.546864 | 8_3:+6484804 | Msa1272750:CDS |
| GGCGCTGGTGCTTCTATGCA+TGG | 0.548075 | 8_3:+6480976 | Msa1272750:CDS |
| CTAAGCTTGATGCTGAAGGA+TGG | 0.548086 | 8_3:+6484983 | Msa1272750:CDS |
| AGAAATATTTCACGATGATG+AGG | 0.552047 | 8_3:+6478994 | Msa1272750:CDS |
| CCTCGAAGAAATCCTTGCTA+TGG | 0.552990 | 8_3:-6484690 | None:intergenic |
| AACAGGATAGTGTTTATCAC+AGG | 0.554120 | 8_3:+6483759 | Msa1272750:CDS |
| TTAACAAGCTCCAATTTGGA+AGG | 0.557519 | 8_3:-6484934 | None:intergenic |
| CAATTCTATACTCGTAAACA+AGG | 0.558815 | 8_3:-6484645 | None:intergenic |
| TGGTCTTACAGGTGCTAGGT+TGG | 0.559352 | 8_3:+6481953 | Msa1272750:CDS |
| CAAATTGCAGGAGAATATGT+TGG | 0.561540 | 8_3:+6481933 | Msa1272750:intron |
| CAAGGCAGGCTCTTAGGTGT+TGG | 0.562954 | 8_3:+6484616 | Msa1272750:CDS |
| TAATCAATAAGTGTTTCTCT+AGG | 0.569952 | 8_3:+6484051 | Msa1272750:CDS |
| GGCAACATACAGTAAGCCTC+AGG | 0.571282 | 8_3:+6480821 | Msa1272750:CDS |
| GCAAGTTGTTGAACCTCTTG+GGG | 0.573050 | 8_3:-6485020 | None:intergenic |
| ACATTTATCAGGGAAATGGA+AGG | 0.587193 | 8_3:+6479708 | Msa1272750:intron |
| ATGTTGGTCTTACAGGTGCT+AGG | 0.591347 | 8_3:+6481949 | Msa1272750:CDS |
| TCACCAAAGGAAAACACGAA+TGG | 0.592926 | 8_3:-6485347 | None:intergenic |
| GAAATATTTCACGATGATGA+GGG | 0.593731 | 8_3:+6478995 | Msa1272750:CDS |
| CATTTATCAGGGAAATGGAA+GGG | 0.594293 | 8_3:+6479709 | Msa1272750:intron |
| ATTGTTTGTCATATCCTACA+AGG | 0.594529 | 8_3:+6484664 | Msa1272750:CDS |
| TAAAGCTTTGAAATAGCATG+TGG | 0.595907 | 8_3:-6485045 | None:intergenic |
| GGTGCAGAAATGCTTGCTTG+TGG | 0.601628 | 8_3:+6481978 | Msa1272750:CDS |
| GTATTGTGCAAAGGTTCTGG+TGG | 0.605879 | 8_3:+6477532 | Msa1272750:intron |
| ATCAACAATCTCATCAGTTG+AGG | 0.610947 | 8_3:+6485072 | Msa1272750:three_prime_UTR |
| AGCTTTGAAATAGCATGTGG+AGG | 0.613403 | 8_3:-6485042 | None:intergenic |
| GTGAAGACCGAGGAAGAGGA+AGG | 0.614974 | 8_3:-6477345 | None:intergenic |
| ATTGGAAGAATCATTATGCA+AGG | 0.625818 | 8_3:+6483670 | Msa1272750:CDS |
| GTATGTAGCATACCGATGAA+GGG | 0.626747 | 8_3:-6482019 | None:intergenic |
| AGGAAGGACCCAAAATGGAT+GGG | 0.627598 | 8_3:-6477329 | None:intergenic |
| GTTGCTAATGACGCAAGAGG+AGG | 0.628706 | 8_3:+6479761 | Msa1272750:CDS |
| TCGGTCTTCACCAACGACCA+TGG | 0.637430 | 8_3:+6477357 | Msa1272750:exon |
| TTTCATCGAGACCACATCAG+TGG | 0.638922 | 8_3:-6485379 | None:intergenic |
| AGATAAAGACAGGAAACCAA+AGG | 0.644265 | 8_3:+6484814 | Msa1272750:CDS |
| GCTGTTGCTAATGACGCAAG+AGG | 0.648895 | 8_3:+6479758 | Msa1272750:CDS |
| GAAATTAACATCCACTGATG+TGG | 0.660086 | 8_3:+6485368 | Msa1272750:three_prime_UTR |
| CTTAATGGAATCGTCATGGG+AGG | 0.671508 | 8_3:+6480952 | Msa1272750:CDS |
| CCTACAAGGACACCATAGCA+AGG | 0.672173 | 8_3:+6484678 | Msa1272750:CDS |
| GGAAGAATCATTATGCAAGG+TGG | 0.673416 | 8_3:+6483673 | Msa1272750:CDS |
| AAGATTTGGAGTTCCCCAAG+AGG | 0.673816 | 8_3:+6485007 | Msa1272750:CDS |
| GTGTTTCTCTAGGAAAACAG+TGG | 0.677969 | 8_3:+6484061 | Msa1272750:CDS |
| ATGGTCGTTGGTGAAGACCG+AGG | 0.702491 | 8_3:-6477355 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATAACTAATGTATT+TGG | - | chr8_3:6477259-6477278 | None:intergenic | 10.0% |
| !!! | TTATTTTTAAATATTTGTAC+TGG | + | chr8_3:6478800-6478819 | Msa1272750:intron | 10.0% |
| !! | TTAGTTAAAAAAAATGTAAT+TGG | + | chr8_3:6479155-6479174 | Msa1272750:intron | 10.0% |
| !!! | ATTAATTATTTGTTTTCATA+TGG | + | chr8_3:6480735-6480754 | Msa1272750:intron | 10.0% |
| !! | ATATAAAATGAATTATTTGA+TGG | + | chr8_3:6480800-6480819 | Msa1272750:CDS | 10.0% |
| !!! | GATTTTGATATAATTTATTT+TGG | - | chr8_3:6482993-6483012 | None:intergenic | 10.0% |
| !! | AAAGTAAGAAAAAAAATTAA+TGG | - | chr8_3:6484473-6484492 | None:intergenic | 10.0% |
| !!! | TATTTGTATTGTATTTATTT+TGG | + | chr8_3:6484878-6484897 | Msa1272750:intron | 10.0% |
| !!! | TAAGTATTTTTATTTCCTTT+TGG | + | chr8_3:6478731-6478750 | Msa1272750:intron | 15.0% |
| !! | TATTAAATGATTCAGTTATT+AGG | + | chr8_3:6479962-6479981 | Msa1272750:intron | 15.0% |
| !! | TTTAGTTATTATAAAGGATT+AGG | - | chr8_3:6481078-6481097 | None:intergenic | 15.0% |
| !! | AAGTTAAGTAAATGAAAATT+TGG | - | chr8_3:6481362-6481381 | None:intergenic | 15.0% |
| !!! | TTTCATTTACTTAACTTTTA+TGG | + | chr8_3:6481365-6481384 | Msa1272750:intron | 15.0% |
| !! | GTGAAATAACTTTAAATTAA+AGG | - | chr8_3:6482710-6482729 | None:intergenic | 15.0% |
| !! | TTGTAACATTTAATACTTTA+TGG | - | chr8_3:6484329-6484348 | None:intergenic | 15.0% |
| !! | AATTACAAAATATCTAAATC+TGG | - | chr8_3:6484430-6484449 | None:intergenic | 15.0% |
| !! | TAGTAAGAAAAATTGAAAAT+TGG | - | chr8_3:6484548-6484567 | None:intergenic | 15.0% |
| !! | AACATTTATCAAATTCAATA+AGG | - | chr8_3:6485327-6485346 | None:intergenic | 15.0% |
| !! | AATGTAAAATTATGCATGTT+TGG | + | chr8_3:6477909-6477928 | Msa1272750:intron | 20.0% |
| !!! | AAAATTGATTTTGACATGTT+TGG | - | chr8_3:6478039-6478058 | None:intergenic | 20.0% |
| !! | TTAATTTCATTGTAATGTGA+TGG | + | chr8_3:6478417-6478436 | Msa1272750:intron | 20.0% |
| !! | TTGATCCAAAATAATATAGA+TGG | - | chr8_3:6478576-6478595 | None:intergenic | 20.0% |
| !!! | AATGAATTTTTCAAATTCTG+AGG | + | chr8_3:6478626-6478645 | Msa1272750:intron | 20.0% |
| !! | ATAAGTAAGAGAATAGAAAA+TGG | - | chr8_3:6478928-6478947 | None:intergenic | 20.0% |
| !! | AAAATTAAATGGAAAATGCT+CGG | - | chr8_3:6479066-6479085 | None:intergenic | 20.0% |
| !! | GCAAAATGCAAAAAATTAAA+TGG | - | chr8_3:6479077-6479096 | None:intergenic | 20.0% |
| !!! | TGTGTTTTATCTATAAAAGA+GGG | - | chr8_3:6479209-6479228 | None:intergenic | 20.0% |
| !!! | TTACTACTAATTGGTTTTAA+TGG | - | chr8_3:6479296-6479315 | None:intergenic | 20.0% |
| !! | TTTATTAGGTTACTACTAAT+TGG | - | chr8_3:6479305-6479324 | None:intergenic | 20.0% |
| !! | TAGTAACCTAATAAATATTG+AGG | + | chr8_3:6479310-6479329 | Msa1272750:intron | 20.0% |
| !! | AGTAACCTAATAAATATTGA+GGG | + | chr8_3:6479311-6479330 | Msa1272750:intron | 20.0% |
| !! | TACATTCTATGTTAAGAAAA+GGG | + | chr8_3:6479526-6479545 | Msa1272750:intron | 20.0% |
| !!! | AATATGGATTTTCTTACTTT+AGG | + | chr8_3:6479683-6479702 | Msa1272750:intron | 20.0% |
| !! | GTTTGATGAATTGAAAATAA+AGG | - | chr8_3:6479796-6479815 | None:intergenic | 20.0% |
| !! | CAAGAATGCAATTAATATTA+TGG | - | chr8_3:6479832-6479851 | None:intergenic | 20.0% |
| !! | AATAAAATAACAATGAGTGA+TGG | - | chr8_3:6479946-6479965 | None:intergenic | 20.0% |
| !!! | TTTTGTAAAAGTATGGTTTT+TGG | - | chr8_3:6480148-6480167 | None:intergenic | 20.0% |
| !!! | TATTTGTTTTCATATGGTAT+AGG | + | chr8_3:6480741-6480760 | Msa1272750:intron | 20.0% |
| !!! | TCACTGTTTTTTTCTTTTTT+TGG | - | chr8_3:6481281-6481300 | None:intergenic | 20.0% |
| !! | AAAAAGAAAAAAACAGTGAT+AGG | + | chr8_3:6481282-6481301 | Msa1272750:intron | 20.0% |
| !! | TCTCTATGATTGATTATAAT+TGG | + | chr8_3:6481517-6481536 | Msa1272750:intron | 20.0% |
| !! | CTCTATGATTGATTATAATT+GGG | + | chr8_3:6481518-6481537 | Msa1272750:intron | 20.0% |
| !! | AAGTTTATCATGAAATATCT+AGG | + | chr8_3:6482192-6482211 | Msa1272750:intron | 20.0% |
| !! | TAAATTAAAGGAAATGACAA+AGG | - | chr8_3:6482698-6482717 | None:intergenic | 20.0% |
| !! | ATATACAATTTGTGAAGATT+AGG | + | chr8_3:6483247-6483266 | Msa1272750:intron | 20.0% |
| !! | TATATGATGTTAAAACTCTT+TGG | + | chr8_3:6483581-6483600 | Msa1272750:intron | 20.0% |
| !! | AATATTGCGTGATAAAATTA+TGG | - | chr8_3:6484197-6484216 | None:intergenic | 20.0% |
| !!! | TAATTTTATCACGCAATATT+AGG | + | chr8_3:6484197-6484216 | Msa1272750:intron | 20.0% |
| !! | AAAAAAATTAATGGCTTAAG+AGG | - | chr8_3:6484464-6484483 | None:intergenic | 20.0% |
| !! | GAAAAATTGAAAATTGGAAA+AGG | - | chr8_3:6484542-6484561 | None:intergenic | 20.0% |
| !! | AACTAATTTATGTCTAGTTA+TGG | - | chr8_3:6484847-6484866 | None:intergenic | 20.0% |
| !!! | TTATATAAGATCAACTTGTT+CGG | - | chr8_3:6485174-6485193 | None:intergenic | 20.0% |
| ! | TCAATATCACTTTCATTCAT+CGG | + | chr8_3:6477451-6477470 | Msa1272750:intron | 25.0% |
| !!! | ATTTTAACTAACGGAATCAA+AGG | - | chr8_3:6477720-6477739 | None:intergenic | 25.0% |
| !!! | CGAGAATCAATTTTAACTAA+CGG | - | chr8_3:6477729-6477748 | None:intergenic | 25.0% |
| !! | TTAGTTAAAATTGATTCTCG+AGG | + | chr8_3:6477729-6477748 | Msa1272750:intron | 25.0% |
| !!! | CTAGAATTGATTTTTTCACA+CGG | + | chr8_3:6477831-6477850 | Msa1272750:intron | 25.0% |
| ! | GACTAAACATAATTTATACG+TGG | - | chr8_3:6477941-6477960 | None:intergenic | 25.0% |
| !! | ATTAATTTGAAGATGAAGCT+AGG | - | chr8_3:6477979-6477998 | None:intergenic | 25.0% |
| ! | CTTCATCTTCAAATTAATTC+TGG | + | chr8_3:6477981-6478000 | Msa1272750:intron | 25.0% |
| ! | AATATATTTGAGCCTATGTT+TGG | - | chr8_3:6478089-6478108 | None:intergenic | 25.0% |
| ! | AAGATAACGTGATTTATGTT+TGG | - | chr8_3:6478139-6478158 | None:intergenic | 25.0% |
| ! | CAATTACTTCAGAAATAAGT+GGG | - | chr8_3:6478450-6478469 | None:intergenic | 25.0% |
| ! | ACAATAATTAAAGGCTAAGA+GGG | - | chr8_3:6478532-6478551 | None:intergenic | 25.0% |
| ! | TGTCACAAGACAATAATTAA+AGG | - | chr8_3:6478541-6478560 | None:intergenic | 25.0% |
| !! | TCTAGCCATCTATATTATTT+TGG | + | chr8_3:6478568-6478587 | Msa1272750:intron | 25.0% |
| !! | GATGACATTTTTGTCATTAT+TGG | - | chr8_3:6478763-6478782 | None:intergenic | 25.0% |
| !!! | TTTTTTGAAAGAGTTCAAAC+AGG | - | chr8_3:6478877-6478896 | None:intergenic | 25.0% |
| ! | TTCTATTCTCTTACTTATCT+TGG | + | chr8_3:6478930-6478949 | Msa1272750:intron | 25.0% |
| ! | TGTTAAATTGATTGTCCTAA+AGG | + | chr8_3:6479027-6479046 | Msa1272750:CDS | 25.0% |
| !! | GTGTGTTTTATCTATAAAAG+AGG | - | chr8_3:6479210-6479229 | None:intergenic | 25.0% |
| ! | TCTTAACATAGAATGTACAT+CGG | - | chr8_3:6479523-6479542 | None:intergenic | 25.0% |
| ! | GTACATTCTATGTTAAGAAA+AGG | + | chr8_3:6479525-6479544 | Msa1272750:intron | 25.0% |
| !! | TACTTTAGGTTACATTTATC+AGG | + | chr8_3:6479697-6479716 | Msa1272750:intron | 25.0% |
| !! | ACTTTAGGTTACATTTATCA+GGG | + | chr8_3:6479698-6479717 | Msa1272750:intron | 25.0% |
| ! | ATTATCAGTAACCATACATA+GGG | + | chr8_3:6479985-6480004 | Msa1272750:intron | 25.0% |
| ! | CAACTTGAAATAAAAAGACT+TGG | - | chr8_3:6480100-6480119 | None:intergenic | 25.0% |
| !!! | CAAGTCTTTTTATTTCAAGT+TGG | + | chr8_3:6480098-6480117 | Msa1272750:intron | 25.0% |
| !! | CTAAGGTTTTTGTAAAAGTA+TGG | - | chr8_3:6480155-6480174 | None:intergenic | 25.0% |
| !! | CATACTTTTACAAAAACCTT+AGG | + | chr8_3:6480153-6480172 | Msa1272750:intron | 25.0% |
| ! | TACTAACATGAATGTAATGA+AGG | - | chr8_3:6480249-6480268 | None:intergenic | 25.0% |
| ! | TATCCCAAAATACATTGTAA+GGG | - | chr8_3:6480543-6480562 | None:intergenic | 25.0% |
| ! | TTATCCCAAAATACATTGTA+AGG | - | chr8_3:6480544-6480563 | None:intergenic | 25.0% |
| ! | TGTTGCAATCTTAATTTAAG+AGG | + | chr8_3:6480604-6480623 | Msa1272750:intron | 25.0% |
| ! | GTTGCAATCTTAATTTAAGA+GGG | + | chr8_3:6480605-6480624 | Msa1272750:intron | 25.0% |
| !! | AACAAAACTTACTGTTTTCT+CGG | - | chr8_3:6481019-6481038 | None:intergenic | 25.0% |
| !! | GAGATAATTTAAGATACTCT+AGG | + | chr8_3:6481119-6481138 | Msa1272750:intron | 25.0% |
| ! | ATACCTTTGACATTATGTTA+TGG | - | chr8_3:6481179-6481198 | None:intergenic | 25.0% |
| ! | ATTTGGATGCTAAATAGATA+GGG | - | chr8_3:6481345-6481364 | None:intergenic | 25.0% |
| ! | AATTTGGATGCTAAATAGAT+AGG | - | chr8_3:6481346-6481365 | None:intergenic | 25.0% |
| ! | TAGTCTAGACAAATAATATG+AGG | - | chr8_3:6481463-6481482 | None:intergenic | 25.0% |
| ! | ATCAAAATCAAATACTTCCA+TGG | + | chr8_3:6481809-6481828 | Msa1272750:intron | 25.0% |
| !!! | TCATAATCAAAAGTATTCCA+TGG | - | chr8_3:6481829-6481848 | None:intergenic | 25.0% |
| !!! | TACAGTTTTTTAAGGATTGT+AGG | - | chr8_3:6482426-6482445 | None:intergenic | 25.0% |
| ! | AGTGCAACATTATATAATCA+GGG | - | chr8_3:6482481-6482500 | None:intergenic | 25.0% |
| ! | TAAGAAAATGGAAAAAGTGA+AGG | - | chr8_3:6482637-6482656 | None:intergenic | 25.0% |
| ! | TGGAAAACGTATTAAGAAAA+TGG | - | chr8_3:6482649-6482668 | None:intergenic | 25.0% |
| !! | GAAAGTATATAATGTAGACA+TGG | - | chr8_3:6482669-6482688 | None:intergenic | 25.0% |
| ! | ATCAAGCATACAAATCAATT+TGG | - | chr8_3:6482815-6482834 | None:intergenic | 25.0% |
| ! | AAGTAATTCTGACTATAAGT+TGG | - | chr8_3:6482966-6482985 | None:intergenic | 25.0% |
| ! | AAAGAAATTAAGTGTGTGTT+TGG | - | chr8_3:6483035-6483054 | None:intergenic | 25.0% |
| !! | GAGATTCATTTTAAACAAGA+TGG | + | chr8_3:6483443-6483462 | Msa1272750:intron | 25.0% |
| !!! | TGCACAATTTTTTTTCCTTA+AGG | + | chr8_3:6483547-6483566 | Msa1272750:intron | 25.0% |
| !!! | TTTTTTTTCCTTAAGGACTA+TGG | + | chr8_3:6483554-6483573 | Msa1272750:intron | 25.0% |
| ! | TATAAATACCATAGTCCTTA+AGG | - | chr8_3:6483565-6483584 | None:intergenic | 25.0% |
| !! | ATGTTAAAACTCTTTGGTTT+GGG | + | chr8_3:6483587-6483606 | Msa1272750:intron | 25.0% |
| !! | ATAAACACTATCCTGTTTTA+GGG | - | chr8_3:6483756-6483775 | None:intergenic | 25.0% |
| ! | ACAATTGAAACATATCACAT+TGG | + | chr8_3:6483966-6483985 | Msa1272750:intron | 25.0% |
| ! | TAAGCAAATAGAAAGAAGAA+AGG | - | chr8_3:6484004-6484023 | None:intergenic | 25.0% |
| ! | TAATCAATAAGTGTTTCTCT+AGG | + | chr8_3:6484051-6484070 | Msa1272750:CDS | 25.0% |
| ! | CCAATCTAAGAAAAACTTTA+AGG | - | chr8_3:6484299-6484318 | None:intergenic | 25.0% |
| !! | CCTTAAAGTTTTTCTTAGAT+TGG | + | chr8_3:6484296-6484315 | Msa1272750:CDS | 25.0% |
| ! | CGTTAAAACTGACAATAAAA+AGG | - | chr8_3:6484377-6484396 | None:intergenic | 25.0% |
| ! | ATTGAAAATTGGAAAAGGAT+TGG | - | chr8_3:6484537-6484556 | None:intergenic | 25.0% |
| ! | TGATTTAATGTCATACTCAA+TGG | + | chr8_3:6484755-6484774 | Msa1272750:intron | 25.0% |
| ! | ATTGATTATGCCTTTATTAG+TGG | + | chr8_3:6484908-6484927 | Msa1272750:intron | 25.0% |
| ! | TTGATTATGCCTTTATTAGT+GGG | + | chr8_3:6484909-6484928 | Msa1272750:intron | 25.0% |
| ! | ACTTAATGTTTGTGATTCTT+TGG | - | chr8_3:6485112-6485131 | None:intergenic | 25.0% |
| !!! | AACATTAAGTTGATTCTTGA+AGG | + | chr8_3:6485122-6485141 | Msa1272750:three_prime_UTR | 25.0% |
| !! | ATCAACTAATTTTTGTTGAC+AGG | - | chr8_3:6485242-6485261 | None:intergenic | 25.0% |
| !!! | ACTGATTCTACCTACTTTTT+TGG | + | chr8_3:6477510-6477529 | Msa1272750:intron | 30.0% |
| TTGCACAATACCAAAAAAGT+AGG | - | chr8_3:6477523-6477542 | None:intergenic | 30.0% | |
| !!! | ACTTTTTTGGTATTGTGCAA+AGG | + | chr8_3:6477523-6477542 | Msa1272750:intron | 30.0% |
| ! | GAATGCTCTCTCTTTTTATA+TGG | + | chr8_3:6477604-6477623 | Msa1272750:CDS | 30.0% |
| ! | ATTTTTACTCCTCCAAACAT+AGG | + | chr8_3:6478074-6478093 | Msa1272750:intron | 30.0% |
| CTAGAATCAATTTCTGATGT+AGG | - | chr8_3:6478333-6478352 | None:intergenic | 30.0% | |
| GCAATTACTTCAGAAATAAG+TGG | - | chr8_3:6478451-6478470 | None:intergenic | 30.0% | |
| GACAATAATTAAAGGCTAAG+AGG | - | chr8_3:6478533-6478552 | None:intergenic | 30.0% | |
| CATTATTGGTGAAAACCAAA+AGG | - | chr8_3:6478749-6478768 | None:intergenic | 30.0% | |
| AAAGAGTTCAAACAGGTAAA+TGG | - | chr8_3:6478870-6478889 | None:intergenic | 30.0% | |
| AGAAATATTTCACGATGATG+AGG | + | chr8_3:6478994-6479013 | Msa1272750:CDS | 30.0% | |
| GAAATATTTCACGATGATGA+GGG | + | chr8_3:6478995-6479014 | Msa1272750:CDS | 30.0% | |
| AGGACAATCAATTTAACATC+AGG | - | chr8_3:6479025-6479044 | None:intergenic | 30.0% | |
| GGTAAATGGAAATTACCTTT+AGG | - | chr8_3:6479045-6479064 | None:intergenic | 30.0% | |
| !!! | TGCATTTTGCTATTGTTCTA+TGG | + | chr8_3:6479087-6479106 | Msa1272750:intron | 30.0% |
| GGAAAAGAGAGAATAACAAT+TGG | + | chr8_3:6479108-6479127 | Msa1272750:intron | 30.0% | |
| !!! | TACTAATTGGTTTTAATGGC+AGG | - | chr8_3:6479292-6479311 | None:intergenic | 30.0% |
| TGAGTCCCTCAATATTTATT+AGG | - | chr8_3:6479319-6479338 | None:intergenic | 30.0% | |
| TCTCATCTCAATATGAATTC+TGG | + | chr8_3:6479364-6479383 | Msa1272750:intron | 30.0% | |
| GATTATCAGTAACCATACAT+AGG | + | chr8_3:6479984-6480003 | Msa1272750:intron | 30.0% | |
| TTATCAGTAACCATACATAG+GGG | + | chr8_3:6479986-6480005 | Msa1272750:intron | 30.0% | |
| TAAAACATAACCCCTATGTA+TGG | - | chr8_3:6479999-6480018 | None:intergenic | 30.0% | |
| ! | ATACATAGGGGTTATGTTTT+AGG | + | chr8_3:6479998-6480017 | Msa1272750:intron | 30.0% |
| TAATGAAAAACGACCATGTT+TGG | + | chr8_3:6480044-6480063 | Msa1272750:intron | 30.0% | |
| ATAGATGATAGTTCCAAACA+TGG | - | chr8_3:6480060-6480079 | None:intergenic | 30.0% | |
| TAACCTCAATACTATGTTGA+TGG | + | chr8_3:6480216-6480235 | Msa1272750:intron | 30.0% | |
| AACAGAAATAAAAGTCACCA+GGG | - | chr8_3:6480479-6480498 | None:intergenic | 30.0% | |
| AAACAGAAATAAAAGTCACC+AGG | - | chr8_3:6480480-6480499 | None:intergenic | 30.0% | |
| !!! | GGTGACTTTTATTTCTGTTT+TGG | + | chr8_3:6480480-6480499 | Msa1272750:intron | 30.0% |
| !!! | GACTTTTATTTCTGTTTTGG+TGG | + | chr8_3:6480483-6480502 | Msa1272750:intron | 30.0% |
| ATCCCAAAATACATTGTAAG+GGG | - | chr8_3:6480542-6480561 | None:intergenic | 30.0% | |
| ! | TTTTATATTCTCCTCCCATA+AGG | - | chr8_3:6480670-6480689 | None:intergenic | 30.0% |
| TTTCATATGGTATAGGTGAT+TGG | + | chr8_3:6480748-6480767 | Msa1272750:intron | 30.0% | |
| ATTTGTTTCCAAACATTTGC+AGG | + | chr8_3:6480921-6480940 | Msa1272750:intron | 30.0% | |
| AATTGAAACCTGCAAATGTT+TGG | - | chr8_3:6480932-6480951 | None:intergenic | 30.0% | |
| TTGCAGGTTTCAATTCTTAA+TGG | + | chr8_3:6480937-6480956 | Msa1272750:intron | 30.0% | |
| AATTCTTAATGGAATCGTCA+TGG | + | chr8_3:6480948-6480967 | Msa1272750:CDS | 30.0% | |
| ATTCTTAATGGAATCGTCAT+GGG | + | chr8_3:6480949-6480968 | Msa1272750:CDS | 30.0% | |
| ATGCCATAACATAATGTCAA+AGG | + | chr8_3:6481173-6481192 | Msa1272750:intron | 30.0% | |
| AAACAAATTTCCTACAACAG+TGG | - | chr8_3:6481253-6481272 | None:intergenic | 30.0% | |
| ! | AACTTTTATGGTTGTACTTG+TGG | + | chr8_3:6481377-6481396 | Msa1272750:intron | 30.0% |
| AAATAATCCCAAAGCTGTTT+CGG | - | chr8_3:6481427-6481446 | None:intergenic | 30.0% | |
| TATTATTTGTCTAGACTAGC+TGG | + | chr8_3:6481465-6481484 | Msa1272750:CDS | 30.0% | |
| ! | TCCAATCTTTTCATCGTTTT+TGG | + | chr8_3:6481568-6481587 | Msa1272750:intron | 30.0% |
| ATTGTTTACTTTCTCTTGCA+TGG | + | chr8_3:6481773-6481792 | Msa1272750:intron | 30.0% | |
| !!! | TCCTCTTTTTTCTTTCCTTT+TGG | + | chr8_3:6481906-6481925 | Msa1272750:intron | 30.0% |
| TCCAAAAGGAAAGAAAAAAG+AGG | - | chr8_3:6481910-6481929 | None:intergenic | 30.0% | |
| ! | TCATAAGAAGTGTACATTCA+TGG | + | chr8_3:6482108-6482127 | Msa1272750:intron | 30.0% |
| ! | CATAAGAAGTGTACATTCAT+GGG | + | chr8_3:6482109-6482128 | Msa1272750:intron | 30.0% |
| ! | TGAAAACCATTGGTTAACAA+TGG | - | chr8_3:6482158-6482177 | None:intergenic | 30.0% |
| ! | ATTGTTAACCAATGGTTTTC+AGG | + | chr8_3:6482157-6482176 | Msa1272750:intron | 30.0% |
| !! | TGTGAATTTTAATAGACCAG+GGG | - | chr8_3:6482403-6482422 | None:intergenic | 30.0% |
| !! | GTGTGAATTTTAATAGACCA+GGG | - | chr8_3:6482404-6482423 | None:intergenic | 30.0% |
| !!! | GTTCATGGTACAGTTTTTTA+AGG | - | chr8_3:6482434-6482453 | None:intergenic | 30.0% |
| TGCAACATTATATAATCAGG+GGG | - | chr8_3:6482479-6482498 | None:intergenic | 30.0% | |
| GTGCAACATTATATAATCAG+GGG | - | chr8_3:6482480-6482499 | None:intergenic | 30.0% | |
| GAGTGCAACATTATATAATC+AGG | - | chr8_3:6482482-6482501 | None:intergenic | 30.0% | |
| AAATGGAAAAAGTGAAGGAA+GGG | - | chr8_3:6482632-6482651 | None:intergenic | 30.0% | |
| AAAATGGAAAAAGTGAAGGA+AGG | - | chr8_3:6482633-6482652 | None:intergenic | 30.0% | |
| AAGGAAATGACAAAGGATAA+AGG | - | chr8_3:6482691-6482710 | None:intergenic | 30.0% | |
| ! | GTGTTATTCTAGTGTATGTT+TGG | + | chr8_3:6482751-6482770 | Msa1272750:intron | 30.0% |
| AATTGTAATCCTTCCAAAAG+TGG | - | chr8_3:6482779-6482798 | None:intergenic | 30.0% | |
| TGATTGTTGTCGAATAGAAT+TGG | + | chr8_3:6482831-6482850 | Msa1272750:intron | 30.0% | |
| !!! | AAATTTTAGAACTTCCCCAA+TGG | - | chr8_3:6483142-6483161 | None:intergenic | 30.0% |
| ! | TATGCATGTAAACTTTTGAG+TGG | + | chr8_3:6483298-6483317 | Msa1272750:intron | 30.0% |
| CATTGAAACTGTTGAAAGTA+AGG | - | chr8_3:6483488-6483507 | None:intergenic | 30.0% | |
| CTTACTTTCAACAGTTTCAA+TGG | + | chr8_3:6483486-6483505 | Msa1272750:intron | 30.0% | |
| GATGTTAAAACTCTTTGGTT+TGG | + | chr8_3:6483586-6483605 | Msa1272750:intron | 30.0% | |
| !! | TGTTAAAACTCTTTGGTTTG+GGG | + | chr8_3:6483588-6483607 | Msa1272750:intron | 30.0% |
| TTGCAAAAGGCAATAAAACA+GGG | - | chr8_3:6483628-6483647 | None:intergenic | 30.0% | |
| ATTGCAAAAGGCAATAAAAC+AGG | - | chr8_3:6483629-6483648 | None:intergenic | 30.0% | |
| ATTGGAAGAATCATTATGCA+AGG | + | chr8_3:6483670-6483689 | Msa1272750:CDS | 30.0% | |
| GTCAATAATTGCAGATACTA+TGG | - | chr8_3:6483714-6483733 | None:intergenic | 30.0% | |
| ! | GATAAACACTATCCTGTTTT+AGG | - | chr8_3:6483757-6483776 | None:intergenic | 30.0% |
| TATTGTCTGTTAAATTCCCT+TGG | + | chr8_3:6483819-6483838 | Msa1272750:intron | 30.0% | |
| ATTGTCTGTTAAATTCCCTT+GGG | + | chr8_3:6483820-6483839 | Msa1272750:intron | 30.0% | |
| ATGACATGTAATTTGACAGA+CGG | - | chr8_3:6483857-6483876 | None:intergenic | 30.0% | |
| TCATAAACATATATCTGTCC+TGG | + | chr8_3:6483873-6483892 | Msa1272750:intron | 30.0% | |
| CATAAACATATATCTGTCCT+GGG | + | chr8_3:6483874-6483893 | Msa1272750:intron | 30.0% | |
| !! | AGAAAAACTTTAAGGCTTGT+CGG | - | chr8_3:6484291-6484310 | None:intergenic | 30.0% |
| ! | TTACCTTTTCAGATTAGACA+AGG | + | chr8_3:6484598-6484617 | Msa1272750:intron | 30.0% |
| CAATTCTATACTCGTAAACA+AGG | - | chr8_3:6484648-6484667 | None:intergenic | 30.0% | |
| ATTGTTTGTCATATCCTACA+AGG | + | chr8_3:6484664-6484683 | Msa1272750:CDS | 30.0% | |
| GAAACATGTGTATGAATTGT+TGG | - | chr8_3:6484720-6484739 | None:intergenic | 30.0% | |
| CTATACTGATAGATAAAGAC+AGG | + | chr8_3:6484804-6484823 | Msa1272750:CDS | 30.0% | |
| !! | TAAAGCTTTGAAATAGCATG+TGG | - | chr8_3:6485048-6485067 | None:intergenic | 30.0% |
| !! | CATGCTATTTCAAAGCTTTA+AGG | + | chr8_3:6485048-6485067 | Msa1272750:CDS | 30.0% |
| !!! | GAGAGAGCATTCAATTGTTT+TGG | - | chr8_3:6477596-6477615 | None:intergenic | 35.0% |
| ! | TTTTCACACGGTGTATACTT+TGG | + | chr8_3:6477843-6477862 | Msa1272750:intron | 35.0% |
| ATATTTGAGCCTATGTTTGG+AGG | - | chr8_3:6478086-6478105 | None:intergenic | 35.0% | |
| !! | GAACATTTAGCTTTCGTGTT+TGG | + | chr8_3:6478231-6478250 | Msa1272750:intron | 35.0% |
| TGACAGGATGTAAAGATGTT+TGG | + | chr8_3:6478304-6478323 | Msa1272750:intron | 35.0% | |
| ! | GAATCAATTCCAAGCCATTT+TGG | - | chr8_3:6478397-6478416 | None:intergenic | 35.0% |
| AAAACCACATGAAGATGTGT+TGG | + | chr8_3:6478477-6478496 | Msa1272750:intron | 35.0% | |
| AAACCACATGAAGATGTGTT+GGG | + | chr8_3:6478478-6478497 | Msa1272750:intron | 35.0% | |
| AAACTAAATGCACTCTTCAG+TGG | - | chr8_3:6478708-6478727 | None:intergenic | 35.0% | |
| TTCAAACAGGTAAATGGAAG+AGG | - | chr8_3:6478864-6478883 | None:intergenic | 35.0% | |
| GTAGCTTAGATACCTATAAC+AGG | - | chr8_3:6478973-6478992 | None:intergenic | 35.0% | |
| AATGGAAAATGCTCGGTAAA+TGG | - | chr8_3:6479059-6479078 | None:intergenic | 35.0% | |
| ATTAAAATATGACATCCCCG+AGG | + | chr8_3:6479254-6479273 | Msa1272750:intron | 35.0% | |
| TTAAAATATGACATCCCCGA+GGG | + | chr8_3:6479255-6479274 | Msa1272750:intron | 35.0% | |
| ATGCACGTATGTTTCTCATT+AGG | + | chr8_3:6479581-6479600 | Msa1272750:intron | 35.0% | |
| TCTCATCTTCGAAGAGAATA+TGG | + | chr8_3:6479667-6479686 | Msa1272750:intron | 35.0% | |
| GGTTACATTTATCAGGGAAA+TGG | + | chr8_3:6479704-6479723 | Msa1272750:intron | 35.0% | |
| ACATTTATCAGGGAAATGGA+AGG | + | chr8_3:6479708-6479727 | Msa1272750:intron | 35.0% | |
| CATTTATCAGGGAAATGGAA+GGG | + | chr8_3:6479709-6479728 | Msa1272750:intron | 35.0% | |
| AAGCCATCAACATAGTATTG+AGG | - | chr8_3:6480222-6480241 | None:intergenic | 35.0% | |
| AATTTGTCGAGTGAGGTTAT+CGG | - | chr8_3:6480320-6480339 | None:intergenic | 35.0% | |
| CAAGCAAAACTCAATAGAGA+TGG | - | chr8_3:6480374-6480393 | None:intergenic | 35.0% | |
| ! | ACTCCCCTTACAATGTATTT+TGG | + | chr8_3:6480536-6480555 | Msa1272750:intron | 35.0% |
| ! | CTCCCCTTACAATGTATTTT+GGG | + | chr8_3:6480537-6480556 | Msa1272750:intron | 35.0% |
| CAACAATTGTCCCAATTACT+TGG | - | chr8_3:6480589-6480608 | None:intergenic | 35.0% | |
| CAATTAGAAAGAGTTACCTG+AGG | - | chr8_3:6480840-6480859 | None:intergenic | 35.0% | |
| TAGGATTAAAAACCGATCCT+AGG | + | chr8_3:6481138-6481157 | Msa1272750:intron | 35.0% | |
| CTTAGTTTATCTCCTAGGAT+CGG | - | chr8_3:6481153-6481172 | None:intergenic | 35.0% | |
| ! | TTTTTCTTCTCCACTGTTGT+AGG | + | chr8_3:6481240-6481259 | Msa1272750:intron | 35.0% |
| CAGTGATAGGAAAGAAATGT+TGG | + | chr8_3:6481295-6481314 | Msa1272750:intron | 35.0% | |
| ! | AATAATCCCAAAGCTGTTTC+GGG | - | chr8_3:6481426-6481445 | None:intergenic | 35.0% |
| TTGGGATTATTTCCTGATGT+AGG | + | chr8_3:6481435-6481454 | Msa1272750:CDS | 35.0% | |
| !!! | TCTAGACTAGCTGGATTTTT+TGG | + | chr8_3:6481474-6481493 | Msa1272750:CDS | 35.0% |
| GCCAAAAACGATGAAAAGAT+TGG | - | chr8_3:6481572-6481591 | None:intergenic | 35.0% | |
| GTGTGTGTGTGTTTGTAAAT+TGG | - | chr8_3:6481654-6481673 | None:intergenic | 35.0% | |
| TATATTCTGTGTGTGCACAT+GGG | - | chr8_3:6481708-6481727 | None:intergenic | 35.0% | |
| TTTACTTTCTCTTGCATGGT+TGG | + | chr8_3:6481777-6481796 | Msa1272750:intron | 35.0% | |
| AGGAAAGAAAAAAGAGGAGA+CGG | - | chr8_3:6481904-6481923 | None:intergenic | 35.0% | |
| !! | CCTGCAATTTGTTTTCCAAA+AGG | - | chr8_3:6481924-6481943 | None:intergenic | 35.0% |
| !! | CCTTTTGGAAAACAAATTGC+AGG | + | chr8_3:6481921-6481940 | Msa1272750:intron | 35.0% |
| CAAATTGCAGGAGAATATGT+TGG | + | chr8_3:6481933-6481952 | Msa1272750:intron | 35.0% | |
| ! | AACACATTTTGTCCCTTCAT+CGG | + | chr8_3:6482007-6482026 | Msa1272750:CDS | 35.0% |
| !! | TTTCTGCTGATTTGCATCTT+TGG | + | chr8_3:6482060-6482079 | Msa1272750:intron | 35.0% |
| ! | GAAGTACCATTGTTAACCAA+TGG | + | chr8_3:6482149-6482168 | Msa1272750:intron | 35.0% |
| ! | ACCTCTTTTGAATGCTTAAG+TGG | + | chr8_3:6482291-6482310 | Msa1272750:intron | 35.0% |
| ACCACTTAAGCATTCAAAAG+AGG | - | chr8_3:6482295-6482314 | None:intergenic | 35.0% | |
| !!! | ACTGTATGCATTTTTAGCCA+TGG | + | chr8_3:6482318-6482337 | Msa1272750:intron | 35.0% |
| !! | GTGAATTTTAATAGACCAGG+GGG | - | chr8_3:6482402-6482421 | None:intergenic | 35.0% |
| !! | GGTGTGAATTTTAATAGACC+AGG | - | chr8_3:6482405-6482424 | None:intergenic | 35.0% |
| !! | TTCATGGTCAGTTTTTAAGG+GGG | - | chr8_3:6482456-6482475 | None:intergenic | 35.0% |
| !! | GTTCATGGTCAGTTTTTAAG+GGG | - | chr8_3:6482457-6482476 | None:intergenic | 35.0% |
| ! | GGTTCATGGTCAGTTTTTAA+GGG | - | chr8_3:6482458-6482477 | None:intergenic | 35.0% |
| TTATATAATCAGGGGGTTCA+TGG | - | chr8_3:6482472-6482491 | None:intergenic | 35.0% | |
| AAAAGATACAAGTTCAGTGC+TGG | - | chr8_3:6482524-6482543 | None:intergenic | 35.0% | |
| !! | TGTATGTTTGGTTCCACTTT+TGG | + | chr8_3:6482763-6482782 | Msa1272750:intron | 35.0% |
| ATCCCAAAAATGAAGCCATT+GGG | + | chr8_3:6483124-6483143 | Msa1272750:intron | 35.0% | |
| CCATGATCATCACTTTATCT+TGG | - | chr8_3:6483170-6483189 | None:intergenic | 35.0% | |
| CCAAGATAAAGTGATGATCA+TGG | + | chr8_3:6483167-6483186 | Msa1272750:intron | 35.0% | |
| ! | GCTTGAAAAAGGTTTAAGGT+TGG | - | chr8_3:6483413-6483432 | None:intergenic | 35.0% |
| CCTAGCTTGAAAAAGGTTTA+AGG | - | chr8_3:6483417-6483436 | None:intergenic | 35.0% | |
| !!! | CCTTAAACCTTTTTCAAGCT+AGG | + | chr8_3:6483414-6483433 | Msa1272750:intron | 35.0% |
| CTATGTACCTAGCTTGAAAA+AGG | - | chr8_3:6483424-6483443 | None:intergenic | 35.0% | |
| TTCTGTGCATACATTGCAAA+AGG | - | chr8_3:6483641-6483660 | None:intergenic | 35.0% | |
| TGCACAGAAATTATCGTCAT+TGG | + | chr8_3:6483652-6483671 | Msa1272750:intron | 35.0% | |
| ATAATTGCAGATACTATGGC+TGG | - | chr8_3:6483710-6483729 | None:intergenic | 35.0% | |
| AACAGGATAGTGTTTATCAC+AGG | + | chr8_3:6483759-6483778 | Msa1272750:CDS | 35.0% | |
| TTATTGTGATTGCTCATTGC+AGG | + | chr8_3:6484021-6484040 | Msa1272750:intron | 35.0% | |
| CTATGAGTAAAGCAGATAGT+TGG | + | chr8_3:6484229-6484248 | Msa1272750:CDS | 35.0% | |
| AATAAGCGAACAAACCTATG+TGG | - | chr8_3:6484401-6484420 | None:intergenic | 35.0% | |
| TTAATGGCTTAAGAGGCAAA+TGG | - | chr8_3:6484457-6484476 | None:intergenic | 35.0% | |
| AATGGTTATGTCCTACTTCA+GGG | + | chr8_3:6484773-6484792 | Msa1272750:intron | 35.0% | |
| AGATAAAGACAGGAAACCAA+AGG | + | chr8_3:6484814-6484833 | Msa1272750:CDS | 35.0% | |
| TTAACAAGCTCCAATTTGGA+AGG | - | chr8_3:6484937-6484956 | None:intergenic | 35.0% | |
| !! | TTCCAAATTGGAGCTTGTTA+AGG | + | chr8_3:6484936-6484955 | Msa1272750:CDS | 35.0% |
| ATCCTTAACAAGCTCCAATT+TGG | - | chr8_3:6484941-6484960 | None:intergenic | 35.0% | |
| ATCAACAATCTCATCAGTTG+AGG | + | chr8_3:6485072-6485091 | Msa1272750:three_prime_UTR | 35.0% | |
| GTGGATGTTAATTTCACCAA+AGG | - | chr8_3:6485363-6485382 | None:intergenic | 35.0% | |
| GAAATTAACATCCACTGATG+TGG | + | chr8_3:6485368-6485387 | Msa1272750:three_prime_UTR | 35.0% | |
| AACCTGATCTTCATCCAGTT+TGG | - | chr8_3:6477392-6477411 | None:intergenic | 40.0% | |
| AGTAGGTAGAATCAGTTTCG+AGG | - | chr8_3:6477506-6477525 | None:intergenic | 40.0% | |
| TTGGTATTGTGCAAAGGTTC+TGG | + | chr8_3:6477529-6477548 | Msa1272750:intron | 40.0% | |
| !! | CGAGAGTTTTGACATTGAAC+AGG | + | chr8_3:6477570-6477589 | Msa1272750:CDS | 40.0% |
| CACGTTAGAATCAGTTCTAC+AGG | - | chr8_3:6477786-6477805 | None:intergenic | 40.0% | |
| GTGTATACTTTGGTTGTCTC+TGG | + | chr8_3:6477853-6477872 | Msa1272750:intron | 40.0% | |
| TGCATAACCAAACACACGTA+CGG | + | chr8_3:6478208-6478227 | Msa1272750:intron | 40.0% | |
| ACATCCTGTCAAACTACGAT+TGG | - | chr8_3:6478295-6478314 | None:intergenic | 40.0% | |
| !! | CCATTTTGGAAGCTACACAT+GGG | - | chr8_3:6478383-6478402 | None:intergenic | 40.0% |
| AACCACATGAAGATGTGTTG+GGG | + | chr8_3:6478479-6478498 | Msa1272750:intron | 40.0% | |
| !! | GATGTGTTGGGGCTTATTTT+TGG | + | chr8_3:6478490-6478509 | Msa1272750:intron | 40.0% |
| ! | ATTAAAGGCTAAGAGGGTAC+AGG | - | chr8_3:6478526-6478545 | None:intergenic | 40.0% |
| TTCGACAGAGTTCAAGAGAA+TGG | + | chr8_3:6478657-6478676 | Msa1272750:intron | 40.0% | |
| TTTGGCAGTGAAATGAGAAG+AGG | - | chr8_3:6478683-6478702 | None:intergenic | 40.0% | |
| CAGGTAAATGGAAGAGGTTA+GGG | - | chr8_3:6478858-6478877 | None:intergenic | 40.0% | |
| ACAGGTAAATGGAAGAGGTT+AGG | - | chr8_3:6478859-6478878 | None:intergenic | 40.0% | |
| TTCTCCTGTCTTCCTGTTAT+AGG | + | chr8_3:6478958-6478977 | Msa1272750:intron | 40.0% | |
| GATACCTATAACAGGAAGAC+AGG | - | chr8_3:6478965-6478984 | None:intergenic | 40.0% | |
| GGATGTGAAAATGTGCACTT+TGG | - | chr8_3:6479633-6479652 | None:intergenic | 40.0% | |
| GATGAGAAGACATGTTGCAA+AGG | - | chr8_3:6479654-6479673 | None:intergenic | 40.0% | |
| AGTGATGGTTACAATAGCTC+GGG | - | chr8_3:6479931-6479950 | None:intergenic | 40.0% | |
| GAGTGATGGTTACAATAGCT+CGG | - | chr8_3:6479932-6479951 | None:intergenic | 40.0% | |
| !! | TAGGGGTTATGTTTTAGGCA+AGG | + | chr8_3:6480003-6480022 | Msa1272750:intron | 40.0% |
| TGGTATGTGTGCTCTTGATA+TGG | + | chr8_3:6480118-6480137 | Msa1272750:intron | 40.0% | |
| ATTGAGGTTATCCACAACAG+AGG | - | chr8_3:6480206-6480225 | None:intergenic | 40.0% | |
| TATCAGAGTAATGTGCCTTG+TGG | + | chr8_3:6480396-6480415 | Msa1272750:intron | 40.0% | |
| TAAATTTAGCAGTACCCTCC+AGG | + | chr8_3:6480561-6480580 | Msa1272750:intron | 40.0% | |
| GCTGCTTCTAAACTCCTTAT+GGG | + | chr8_3:6480653-6480672 | Msa1272750:intron | 40.0% | |
| GGTATAGGTGATTGGAGATT+TGG | + | chr8_3:6480756-6480775 | Msa1272750:intron | 40.0% | |
| GGCATCTTAGTTTATCTCCT+AGG | - | chr8_3:6481158-6481177 | None:intergenic | 40.0% | |
| GGATGCTAAATAGATAGGGA+AGG | - | chr8_3:6481341-6481360 | None:intergenic | 40.0% | |
| GCATAGCAAATACCTGCAAA+TGG | - | chr8_3:6481404-6481423 | None:intergenic | 40.0% | |
| ! | TGATGTCTCCTGCATACTTT+TGG | + | chr8_3:6481595-6481614 | Msa1272750:intron | 40.0% |
| GTATATTCTGTGTGTGCACA+TGG | - | chr8_3:6481709-6481728 | None:intergenic | 40.0% | |
| TGCACACACAGAATATACCT+GGG | + | chr8_3:6481711-6481730 | Msa1272750:intron | 40.0% | |
| GAAAGAAAAAAGAGGAGACG+GGG | - | chr8_3:6481902-6481921 | None:intergenic | 40.0% | |
| GGAAAGAAAAAAGAGGAGAC+GGG | - | chr8_3:6481903-6481922 | None:intergenic | 40.0% | |
| !! | GGAGAATATGTTGGTCTTAC+AGG | + | chr8_3:6481942-6481961 | Msa1272750:intron | 40.0% |
| GTATGTAGCATACCGATGAA+GGG | - | chr8_3:6482022-6482041 | None:intergenic | 40.0% | |
| AGTATGTAGCATACCGATGA+AGG | - | chr8_3:6482023-6482042 | None:intergenic | 40.0% | |
| TACACTTCTTATGACTCGAC+TGG | - | chr8_3:6482102-6482121 | None:intergenic | 40.0% | |
| !! | TCAGTTTTTAAGGGGGTTCA+TGG | - | chr8_3:6482449-6482468 | None:intergenic | 40.0% |
| ! | GGGTTCATGGTCAGTTTTTA+AGG | - | chr8_3:6482459-6482478 | None:intergenic | 40.0% |
| ATATTGTGTGGTTGCAGTAG+TGG | - | chr8_3:6482570-6482589 | None:intergenic | 40.0% | |
| ATAGCACTGCACATATTGTG+TGG | - | chr8_3:6482582-6482601 | None:intergenic | 40.0% | |
| AAGGGTCAGAATGTGGTTAT+AGG | - | chr8_3:6482614-6482633 | None:intergenic | 40.0% | |
| !! | TGTTTGGTTCCACTTTTGGA+AGG | + | chr8_3:6482767-6482786 | Msa1272750:intron | 40.0% |
| TAAGTGTGTGTTTGGTTGTG+CGG | - | chr8_3:6483027-6483046 | None:intergenic | 40.0% | |
| GATCCCAAAAATGAAGCCAT+TGG | + | chr8_3:6483123-6483142 | Msa1272750:intron | 40.0% | |
| TCCCAAAAATGAAGCCATTG+GGG | + | chr8_3:6483125-6483144 | Msa1272750:intron | 40.0% | |
| !! | TCCCCAATGGCTTCATTTTT+GGG | - | chr8_3:6483129-6483148 | None:intergenic | 40.0% |
| ! | TTCCCCAATGGCTTCATTTT+TGG | - | chr8_3:6483130-6483149 | None:intergenic | 40.0% |
| ! | AAGGTTTAAGGTTGGATCAG+TGG | - | chr8_3:6483405-6483424 | None:intergenic | 40.0% |
| AGTTTCAATGGATCTTCCTG+TGG | + | chr8_3:6483498-6483517 | Msa1272750:intron | 40.0% | |
| CCTGTGGAACTTTATTACGT+CGG | + | chr8_3:6483514-6483533 | Msa1272750:intron | 40.0% | |
| CTGTGGAACTTTATTACGTC+GGG | + | chr8_3:6483515-6483534 | Msa1272750:intron | 40.0% | |
| GGAAGAATCATTATGCAAGG+TGG | + | chr8_3:6483673-6483692 | Msa1272750:CDS | 40.0% | |
| !!! | ACACTATCCTGTTTTAGGGA+AGG | - | chr8_3:6483752-6483771 | None:intergenic | 40.0% |
| GGATAGTGTTTATCACAGGT+TGG | + | chr8_3:6483763-6483782 | Msa1272750:intron | 40.0% | |
| ATTTGACAGACGGTTATCCT+AGG | - | chr8_3:6483847-6483866 | None:intergenic | 40.0% | |
| ! | TCTGTACGTTTCTGAGAACT+TGG | + | chr8_3:6483908-6483927 | Msa1272750:intron | 40.0% |
| !! | CATATCACATTGGCTTAGTC+AGG | + | chr8_3:6483976-6483995 | Msa1272750:intron | 40.0% |
| ! | GTGTTTCTCTAGGAAAACAG+TGG | + | chr8_3:6484061-6484080 | Msa1272750:CDS | 40.0% |
| !! | GTCAGTTTTAACGACCACAT+AGG | + | chr8_3:6484384-6484403 | Msa1272750:intron | 40.0% |
| CTGCCTTGTCTAATCTGAAA+AGG | - | chr8_3:6484604-6484623 | None:intergenic | 40.0% | |
| ! | CTTTTCAGATTAGACAAGGC+AGG | + | chr8_3:6484602-6484621 | Msa1272750:intron | 40.0% |
| CAATGGTTATGTCCTACTTC+AGG | + | chr8_3:6484772-6484791 | Msa1272750:intron | 40.0% | |
| TAAAGACAGGAAACCAAAGG+TGG | + | chr8_3:6484817-6484836 | Msa1272750:intron | 40.0% | |
| AAAGACAGGAAACCAAAGGT+GGG | + | chr8_3:6484818-6484837 | Msa1272750:intron | 40.0% | |
| TAGTTATGGTTTCCCACCTT+TGG | - | chr8_3:6484833-6484852 | None:intergenic | 40.0% | |
| TGGAAGGATCCCACTAATAA+AGG | - | chr8_3:6484921-6484940 | None:intergenic | 40.0% | |
| TTAGTGGGATCCTTCCAAAT+TGG | + | chr8_3:6484924-6484943 | Msa1272750:intron | 40.0% | |
| TTCTCTAAGCTTGATGCTGA+AGG | + | chr8_3:6484979-6484998 | Msa1272750:CDS | 40.0% | |
| TGCTGAAGGATGGAAAGATT+TGG | + | chr8_3:6484993-6485012 | Msa1272750:CDS | 40.0% | |
| !! | AGCTTTGAAATAGCATGTGG+AGG | - | chr8_3:6485045-6485064 | None:intergenic | 40.0% |
| ! | GTTCCATTCGTGTTTTCCTT+TGG | + | chr8_3:6485344-6485363 | Msa1272750:three_prime_UTR | 40.0% |
| TCACCAAAGGAAAACACGAA+TGG | - | chr8_3:6485350-6485369 | None:intergenic | 40.0% | |
| ! | ATAGCAGCACCCATCCATTT+TGG | + | chr8_3:6477320-6477339 | Msa1272750:five_prime_UTR | 45.0% |
| ! | TAGCAGCACCCATCCATTTT+GGG | + | chr8_3:6477321-6477340 | Msa1272750:five_prime_UTR | 45.0% |
| AGGAAGGACCCAAAATGGAT+GGG | - | chr8_3:6477332-6477351 | None:intergenic | 45.0% | |
| TGATCTTCATCCAGTTTGGC+GGG | - | chr8_3:6477388-6477407 | None:intergenic | 45.0% | |
| CTGATCTTCATCCAGTTTGG+CGG | - | chr8_3:6477389-6477408 | None:intergenic | 45.0% | |
| ! | GTATTGTGCAAAGGTTCTGG+TGG | + | chr8_3:6477532-6477551 | Msa1272750:intron | 45.0% |
| GCATAACCAAACACACGTAC+GGG | + | chr8_3:6478209-6478228 | Msa1272750:intron | 45.0% | |
| AATGTTCCCGTACGTGTGTT+TGG | - | chr8_3:6478218-6478237 | None:intergenic | 45.0% | |
| ! | AGCTTTCGTGTTTGGTTCCA+TGG | + | chr8_3:6478239-6478258 | Msa1272750:intron | 45.0% |
| ! | TTCGTGTTTGGTTCCATGGT+TGG | + | chr8_3:6478243-6478262 | Msa1272750:intron | 45.0% |
| ! | TGTTTGGTTCCATGGTTGGA+GGG | + | chr8_3:6478247-6478266 | Msa1272750:intron | 45.0% |
| GCTCAAACTTGAGTTTGCCA+TGG | + | chr8_3:6478269-6478288 | Msa1272750:intron | 45.0% | |
| ! | TGTCAAACTACGATTGGCCA+TGG | - | chr8_3:6478289-6478308 | None:intergenic | 45.0% |
| ATGGCCAATCGTAGTTTGAC+AGG | + | chr8_3:6478288-6478307 | Msa1272750:intron | 45.0% | |
| CCCATGTGTAGCTTCCAAAA+TGG | + | chr8_3:6478380-6478399 | Msa1272750:intron | 45.0% | |
| !! | GCCATTTTGGAAGCTACACA+TGG | - | chr8_3:6478384-6478403 | None:intergenic | 45.0% |
| GTGTAGCTTCCAAAATGGCT+TGG | + | chr8_3:6478385-6478404 | Msa1272750:intron | 45.0% | |
| ATGCACTCTTCAGTGGCATT+TGG | - | chr8_3:6478701-6478720 | None:intergenic | 45.0% | |
| !! | GTTAGGGTCAGTTTGGTTTG+TGG | - | chr8_3:6478842-6478861 | None:intergenic | 45.0% |
| !!! | AATGGAAGGGCATTTTGTGC+TGG | + | chr8_3:6479722-6479741 | Msa1272750:CDS | 45.0% |
| TCAGAGGGTGACAAATGGTT+TGG | - | chr8_3:6480280-6480299 | None:intergenic | 45.0% | |
| GTTATCGGATGAAGTCATGG+CGG | - | chr8_3:6480305-6480324 | None:intergenic | 45.0% | |
| GAGGTTATCGGATGAAGTCA+TGG | - | chr8_3:6480308-6480327 | None:intergenic | 45.0% | |
| ACTCAATAGAGATGGACCTG+TGG | - | chr8_3:6480366-6480385 | None:intergenic | 45.0% | |
| TAGCAAGGTGAATAGAGGCA+AGG | - | chr8_3:6480439-6480458 | None:intergenic | 45.0% | |
| ATCGCTAGCAAGGTGAATAG+AGG | - | chr8_3:6480444-6480463 | None:intergenic | 45.0% | |
| CGCTGCTTCTAAACTCCTTA+TGG | + | chr8_3:6480652-6480671 | Msa1272750:intron | 45.0% | |
| GCTTCTAAACTCCTTATGGG+AGG | + | chr8_3:6480656-6480675 | Msa1272750:intron | 45.0% | |
| CTTAATGGAATCGTCATGGG+AGG | + | chr8_3:6480952-6480971 | Msa1272750:CDS | 45.0% | |
| TGTACTTGTGGACCATTTGC+AGG | + | chr8_3:6481389-6481408 | Msa1272750:intron | 45.0% | |
| ! | TAATATGAGGCGCCTACATC+AGG | - | chr8_3:6481450-6481469 | None:intergenic | 45.0% |
| ! | TGTCTCCTGCATACTTTTGG+TGG | + | chr8_3:6481598-6481617 | Msa1272750:intron | 45.0% |
| ! | AGCAACCACCAAAAGTATGC+AGG | - | chr8_3:6481606-6481625 | None:intergenic | 45.0% |
| GTGCACACACAGAATATACC+TGG | + | chr8_3:6481710-6481729 | Msa1272750:intron | 45.0% | |
| GCACACACAGAATATACCTG+GGG | + | chr8_3:6481712-6481731 | Msa1272750:intron | 45.0% | |
| CACACACAGAATATACCTGG+GGG | + | chr8_3:6481713-6481732 | Msa1272750:intron | 45.0% | |
| !! | ATGTTGGTCTTACAGGTGCT+AGG | + | chr8_3:6481949-6481968 | Msa1272750:CDS | 45.0% |
| !! | TAACCAATGGTTTTCAGGCG+TGG | + | chr8_3:6482162-6482181 | Msa1272750:intron | 45.0% |
| ATTCCACGCCTGAAAACCAT+TGG | - | chr8_3:6482168-6482187 | None:intergenic | 45.0% | |
| GGATACAGCTTGAATCTCCA+TGG | - | chr8_3:6482338-6482357 | None:intergenic | 45.0% | |
| TTCAAGCTGTATCCAACCCA+TGG | + | chr8_3:6482344-6482363 | Msa1272750:intron | 45.0% | |
| TCAAGCTGTATCCAACCCAT+GGG | + | chr8_3:6482345-6482364 | Msa1272750:intron | 45.0% | |
| CCGACGTAATAAAGTTCCAC+AGG | - | chr8_3:6483517-6483536 | None:intergenic | 45.0% | |
| GTTAAATTCCCTTGGGTCCT+AGG | + | chr8_3:6483827-6483846 | Msa1272750:intron | 45.0% | |
| TGTGATTGCTCATTGCAGGA+TGG | + | chr8_3:6484025-6484044 | Msa1272750:intron | 45.0% | |
| TGTCGGAGATGCTTTCTTCA+AGG | - | chr8_3:6484274-6484293 | None:intergenic | 45.0% | |
| ATTAGACAAGGCAGGCTCTT+AGG | + | chr8_3:6484610-6484629 | Msa1272750:CDS | 45.0% | |
| CCTCGAAGAAATCCTTGCTA+TGG | - | chr8_3:6484693-6484712 | None:intergenic | 45.0% | |
| CCATAGCAAGGATTTCTTCG+AGG | + | chr8_3:6484690-6484709 | Msa1272750:CDS | 45.0% | |
| ! | TAGCTCTACAACCCTGAAGT+AGG | - | chr8_3:6484787-6484806 | None:intergenic | 45.0% |
| CTAAGCTTGATGCTGAAGGA+TGG | + | chr8_3:6484983-6485002 | Msa1272750:CDS | 45.0% | |
| ! | AAGATTTGGAGTTCCCCAAG+AGG | + | chr8_3:6485007-6485026 | Msa1272750:CDS | 45.0% |
| GCAAGTTGTTGAACCTCTTG+GGG | - | chr8_3:6485023-6485042 | None:intergenic | 45.0% | |
| GGCAAGTTGTTGAACCTCTT+GGG | - | chr8_3:6485024-6485043 | None:intergenic | 45.0% | |
| AGGCAAGTTGTTGAACCTCT+TGG | - | chr8_3:6485025-6485044 | None:intergenic | 45.0% | |
| !! | TATTAAAATTAAAATATTAC+TGG | - | chr8_3:6477303-6477322 | None:intergenic | 5.0% |
| !! | ATATTATTTAGTTATTATAA+AGG | - | chr8_3:6481084-6481103 | None:intergenic | 5.0% |
| GAGGAAGGACCCAAAATGGA+TGG | - | chr8_3:6477333-6477352 | None:intergenic | 50.0% | |
| GGAAGAGGAAGGACCCAAAA+TGG | - | chr8_3:6477337-6477356 | None:intergenic | 50.0% | |
| TTTGGGTCCTTCCTCTTCCT+CGG | + | chr8_3:6477338-6477357 | Msa1272750:five_prime_UTR | 50.0% | |
| ATCTTCATCCAGTTTGGCGG+GGG | - | chr8_3:6477386-6477405 | None:intergenic | 50.0% | |
| GATCTTCATCCAGTTTGGCG+GGG | - | chr8_3:6477387-6477406 | None:intergenic | 50.0% | |
| CGCCAAACTGGATGAAGATC+AGG | + | chr8_3:6477387-6477406 | Msa1272750:CDS | 50.0% | |
| ! | GTGTTTGGTTCCATGGTTGG+AGG | + | chr8_3:6478246-6478265 | Msa1272750:intron | 50.0% |
| AAGTTTGAGCCCTCCAACCA+TGG | - | chr8_3:6478259-6478278 | None:intergenic | 50.0% | |
| AGCCCCAACACATCTTCATG+TGG | - | chr8_3:6478484-6478503 | None:intergenic | 50.0% | |
| GGAAGAGGTTAGGGTCAGTT+TGG | - | chr8_3:6478849-6478868 | None:intergenic | 50.0% | |
| AGGTGTAAATCAGTCCCTCG+GGG | - | chr8_3:6479272-6479291 | None:intergenic | 50.0% | |
| CAGGTGTAAATCAGTCCCTC+GGG | - | chr8_3:6479273-6479292 | None:intergenic | 50.0% | |
| GCAGGTGTAAATCAGTCCCT+CGG | - | chr8_3:6479274-6479293 | None:intergenic | 50.0% | |
| GCTGTTGCTAATGACGCAAG+AGG | + | chr8_3:6479758-6479777 | Msa1272750:CDS | 50.0% | |
| GTTGCTAATGACGCAAGAGG+AGG | + | chr8_3:6479761-6479780 | Msa1272750:CDS | 50.0% | |
| CAATAGAGATGGACCTGTGG+TGG | - | chr8_3:6480363-6480382 | None:intergenic | 50.0% | |
| TGCCTTGTGGTAGCATGTGA+AGG | + | chr8_3:6480409-6480428 | Msa1272750:intron | 50.0% | |
| TGCCTTCACATGCTACCACA+AGG | - | chr8_3:6480414-6480433 | None:intergenic | 50.0% | |
| AGTCACCAGGGTAGACAGAT+GGG | - | chr8_3:6480467-6480486 | None:intergenic | 50.0% | |
| AAGTCACCAGGGTAGACAGA+TGG | - | chr8_3:6480468-6480487 | None:intergenic | 50.0% | |
| ! | TAACCTCGAGTTGCAGGCTT+GGG | - | chr8_3:6480516-6480535 | None:intergenic | 50.0% |
| ! | TTAACCTCGAGTTGCAGGCT+TGG | - | chr8_3:6480517-6480536 | None:intergenic | 50.0% |
| CCAATTACTTGGAGCCTGGA+GGG | - | chr8_3:6480578-6480597 | None:intergenic | 50.0% | |
| CCTCCAGGCTCCAAGTAATT+GGG | + | chr8_3:6480576-6480595 | Msa1272750:intron | 50.0% | |
| TGTCCCAATTACTTGGAGCC+TGG | - | chr8_3:6480582-6480601 | None:intergenic | 50.0% | |
| GGCAACATACAGTAAGCCTC+AGG | + | chr8_3:6480821-6480840 | Msa1272750:CDS | 50.0% | |
| AATGGAATCGTCATGGGAGG+TGG | + | chr8_3:6480955-6480974 | Msa1272750:CDS | 50.0% | |
| TGCTATGCCCGAAACAGCTT+TGG | + | chr8_3:6481416-6481435 | Msa1272750:CDS | 50.0% | |
| GCTATGCCCGAAACAGCTTT+GGG | + | chr8_3:6481417-6481436 | Msa1272750:CDS | 50.0% | |
| ACACAGAATATACCTGGGGG+TGG | + | chr8_3:6481716-6481735 | Msa1272750:intron | 50.0% | |
| AGAATATACCTGGGGGTGGA+AGG | + | chr8_3:6481720-6481739 | Msa1272750:intron | 50.0% | |
| GAATATACCTGGGGGTGGAA+GGG | + | chr8_3:6481721-6481740 | Msa1272750:intron | 50.0% | |
| AATATACCTGGGGGTGGAAG+GGG | + | chr8_3:6481722-6481741 | Msa1272750:intron | 50.0% | |
| ! | TGGTCTTACAGGTGCTAGGT+TGG | + | chr8_3:6481953-6481972 | Msa1272750:CDS | 50.0% |
| ! | CTTACAGGTGCTAGGTTGGA+TGG | + | chr8_3:6481957-6481976 | Msa1272750:CDS | 50.0% |
| GGTGCAGAAATGCTTGCTTG+TGG | + | chr8_3:6481978-6481997 | Msa1272750:CDS | 50.0% | |
| ACATATGTAGCTCCGCCCAT+GGG | - | chr8_3:6482363-6482382 | None:intergenic | 50.0% | |
| !! | CAGTGCTGGCAGTGTTTGAT+TGG | - | chr8_3:6482510-6482529 | None:intergenic | 50.0% |
| GTGAAGGAAGGGTCAGAATG+TGG | - | chr8_3:6482621-6482640 | None:intergenic | 50.0% | |
| AGAGCAGCCTTCCCTAAAAC+AGG | + | chr8_3:6483742-6483761 | Msa1272750:CDS | 50.0% | |
| ACGGTTATCCTAGGACCCAA+GGG | - | chr8_3:6483838-6483857 | None:intergenic | 50.0% | |
| CTGAGAACTTGGAGCATGTC+TGG | + | chr8_3:6483919-6483938 | Msa1272750:intron | 50.0% | |
| ! | CCTTGCTATGGTGTCCTTGT+AGG | - | chr8_3:6484681-6484700 | None:intergenic | 50.0% |
| CCTACAAGGACACCATAGCA+AGG | + | chr8_3:6484678-6484697 | Msa1272750:CDS | 50.0% | |
| GTGAAGACCGAGGAAGAGGA+AGG | - | chr8_3:6477348-6477367 | None:intergenic | 55.0% | |
| ! | GTTGGTGAAGACCGAGGAAG+AGG | - | chr8_3:6477352-6477371 | None:intergenic | 55.0% |
| ! | ATGGTCGTTGGTGAAGACCG+AGG | - | chr8_3:6477358-6477377 | None:intergenic | 55.0% |
| TCGGTCTTCACCAACGACCA+TGG | + | chr8_3:6477357-6477376 | Msa1272750:exon | 55.0% | |
| !!! | GGAAGGGCATTTTGTGCTGG+TGG | + | chr8_3:6479725-6479744 | Msa1272750:CDS | 55.0% |
| CAGCTGGTGTAGGTTGCCTA+AGG | - | chr8_3:6480172-6480191 | None:intergenic | 55.0% | |
| TAGGCAACCTACACCAGCTG+CGG | + | chr8_3:6480172-6480191 | Msa1272750:intron | 55.0% | |
| CGGCTCAACTACCTCTGTTG+TGG | + | chr8_3:6480192-6480211 | Msa1272750:intron | 55.0% | |
| CGGCATCAGAGGGTGACAAA+TGG | - | chr8_3:6480285-6480304 | None:intergenic | 55.0% | |
| GAAGTCATGGCGGCATCAGA+GGG | - | chr8_3:6480295-6480314 | None:intergenic | 55.0% | |
| TGAAGTCATGGCGGCATCAG+AGG | - | chr8_3:6480296-6480315 | None:intergenic | 55.0% | |
| GGGTGGCAATTTGTCGAGTG+AGG | - | chr8_3:6480327-6480346 | None:intergenic | 55.0% | |
| GTGGTGGTCGGTTGGATGAA+GGG | - | chr8_3:6480347-6480366 | None:intergenic | 55.0% | |
| TGTGGTGGTCGGTTGGATGA+AGG | - | chr8_3:6480348-6480367 | None:intergenic | 55.0% | |
| TTCATCCAACCGACCACCAC+AGG | + | chr8_3:6480347-6480366 | Msa1272750:intron | 55.0% | |
| AGAGATGGACCTGTGGTGGT+CGG | - | chr8_3:6480359-6480378 | None:intergenic | 55.0% | |
| GACAGATGGGATCGCTAGCA+AGG | - | chr8_3:6480454-6480473 | None:intergenic | 55.0% | |
| TTTCCCAAGCCTGCAACTCG+AGG | + | chr8_3:6480510-6480529 | Msa1272750:intron | 55.0% | |
| ! | GGGAGTTAACCTCGAGTTGC+AGG | - | chr8_3:6480522-6480541 | None:intergenic | 55.0% |
| CCCTCCAGGCTCCAAGTAAT+TGG | + | chr8_3:6480575-6480594 | Msa1272750:intron | 55.0% | |
| CCCAATTACTTGGAGCCTGG+AGG | - | chr8_3:6480579-6480598 | None:intergenic | 55.0% | |
| GTGTGCACATGGGTGTGTGT+GGG | - | chr8_3:6481698-6481717 | None:intergenic | 55.0% | |
| TGTGTGCACATGGGTGTGTG+TGG | - | chr8_3:6481699-6481718 | None:intergenic | 55.0% | |
| AGCTGTATCCAACCCATGGG+CGG | + | chr8_3:6482348-6482367 | Msa1272750:intron | 55.0% | |
| CACATATGTAGCTCCGCCCA+TGG | - | chr8_3:6482364-6482383 | None:intergenic | 55.0% | |
| GGCGGAGCTACATATGTGTG+AGG | + | chr8_3:6482366-6482385 | Msa1272750:intron | 55.0% | |
| GACGGTTATCCTAGGACCCA+AGG | - | chr8_3:6483839-6483858 | None:intergenic | 55.0% | |
| TACAGAGCTCACACTGTCCC+AGG | - | chr8_3:6483894-6483913 | None:intergenic | 55.0% | |
| CAAGGCAGGCTCTTAGGTGT+TGG | + | chr8_3:6484616-6484635 | Msa1272750:CDS | 55.0% | |
| AGTTGAGCCGCAGCTGGTGT+AGG | - | chr8_3:6480182-6480201 | None:intergenic | 60.0% | |
| AGAGGTAGTTGAGCCGCAGC+TGG | - | chr8_3:6480188-6480207 | None:intergenic | 60.0% | |
| GTGGTCGGTTGGATGAAGGG+TGG | - | chr8_3:6480344-6480363 | None:intergenic | 60.0% | |
| ATGGACCTGTGGTGGTCGGT+TGG | - | chr8_3:6480355-6480374 | None:intergenic | 60.0% | |
| GCGATCCCATCTGTCTACCC+TGG | + | chr8_3:6480459-6480478 | Msa1272750:intron | 60.0% | |
| !! | GGCGCTGGTGCTTCTATGCA+TGG | + | chr8_3:6480976-6480995 | Msa1272750:CDS | 60.0% |
| ATGTAGCTCCGCCCATGGGT+TGG | - | chr8_3:6482359-6482378 | None:intergenic | 60.0% | |
| TGAGGTTCAGCTGAACCCCC+TGG | + | chr8_3:6482384-6482403 | Msa1272750:intron | 60.0% | |
| !! | TTGCCAGGACTCTGGAGCAG+GGG | - | chr8_3:6483380-6483399 | None:intergenic | 60.0% |
| !! | GTTGCCAGGACTCTGGAGCA+GGG | - | chr8_3:6483381-6483400 | None:intergenic | 60.0% |
| GTTGGATCAGTGGCGTTGCC+AGG | - | chr8_3:6483395-6483414 | None:intergenic | 60.0% | |
| CAGTTTGGCGGGGGATGCCA+TGG | - | chr8_3:6477377-6477396 | None:intergenic | 65.0% | |
| CATGGCATCCCCCGCCAAAC+TGG | + | chr8_3:6477375-6477394 | Msa1272750:exon | 65.0% | |
| ATCGTCATGGGAGGTGGCGC+TGG | + | chr8_3:6480961-6480980 | Msa1272750:CDS | 65.0% | |
| ACCTGGGGGTGGAAGGGGAT+TGG | + | chr8_3:6481727-6481746 | Msa1272750:intron | 65.0% | |
| AACCCCCTGCTCCAGAGTCC+TGG | + | chr8_3:6483374-6483393 | Msa1272750:intron | 65.0% | |
| !! | TGCCAGGACTCTGGAGCAGG+GGG | - | chr8_3:6483379-6483398 | None:intergenic | 65.0% |
| !! | CGTTGCCAGGACTCTGGAGC+AGG | - | chr8_3:6483382-6483401 | None:intergenic | 65.0% |
| CAGTGGCGTTGCCAGGACTC+TGG | - | chr8_3:6483388-6483407 | None:intergenic | 65.0% | |
| GCGGGGGATGCCATGGTCGT+TGG | - | chr8_3:6477370-6477389 | None:intergenic | 70.0% | |
| GCCAATCCCCTTCCACCCCC+AGG | - | chr8_3:6481731-6481750 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 6477216 | 6485396 | 6477216 | ID=Msa1272750;Name=Msa1272750 |
| chr8_3 | mRNA | 6477216 | 6485396 | 6477216 | ID=Msa1272750-mRNA-1;Parent=Msa1272750;Name=Msa1272750-mRNA-1;_AED=0.05;_eAED=0.05;_QI=160|1|1|1|0.84|0.92|14|328|382 |
| chr8_3 | exon | 6477216 | 6477408 | 6477216 | ID=Msa1272750-mRNA-1:exon:2327;Parent=Msa1272750-mRNA-1 |
| chr8_3 | exon | 6477545 | 6477625 | 6477545 | ID=Msa1272750-mRNA-1:exon:2328;Parent=Msa1272750-mRNA-1 |
| chr8_3 | exon | 6478980 | 6479048 | 6478980 | ID=Msa1272750-mRNA-1:exon:2329;Parent=Msa1272750-mRNA-1 |
| chr8_3 | exon | 6479719 | 6479782 | 6479719 | ID=Msa1272750-mRNA-1:exon:2330;Parent=Msa1272750-mRNA-1 |
| chr8_3 | exon | 6480763 | 6480842 | 6480763 | ID=Msa1272750-mRNA-1:exon:2331;Parent=Msa1272750-mRNA-1 |
| chr8_3 | exon | 6480943 | 6481026 | 6480943 | ID=Msa1272750-mRNA-1:exon:2332;Parent=Msa1272750-mRNA-1 |
| chr8_3 | exon | 6481411 | 6481495 | 6481411 | ID=Msa1272750-mRNA-1:exon:2333;Parent=Msa1272750-mRNA-1 |
| chr8_3 | exon | 6481943 | 6482028 | 6481943 | ID=Msa1272750-mRNA-1:exon:2334;Parent=Msa1272750-mRNA-1 |
| chr8_3 | exon | 6483659 | 6483780 | 6483659 | ID=Msa1272750-mRNA-1:exon:2335;Parent=Msa1272750-mRNA-1 |
| chr8_3 | exon | 6484043 | 6484103 | 6484043 | ID=Msa1272750-mRNA-1:exon:2336;Parent=Msa1272750-mRNA-1 |
| chr8_3 | exon | 6484219 | 6484317 | 6484219 | ID=Msa1272750-mRNA-1:exon:2337;Parent=Msa1272750-mRNA-1 |
| chr8_3 | exon | 6484610 | 6484711 | 6484610 | ID=Msa1272750-mRNA-1:exon:2338;Parent=Msa1272750-mRNA-1 |
| chr8_3 | exon | 6484794 | 6484835 | 6484794 | ID=Msa1272750-mRNA-1:exon:2339;Parent=Msa1272750-mRNA-1 |
| chr8_3 | exon | 6484928 | 6485396 | 6484928 | ID=Msa1272750-mRNA-1:exon:2340;Parent=Msa1272750-mRNA-1 |
| chr8_3 | five_prime_UTR | 6477216 | 6477375 | 6477216 | ID=Msa1272750-mRNA-1:five_prime_utr;Parent=Msa1272750-mRNA-1 |
| chr8_3 | CDS | 6477376 | 6477408 | 6477376 | ID=Msa1272750-mRNA-1:cds;Parent=Msa1272750-mRNA-1 |
| chr8_3 | CDS | 6477545 | 6477625 | 6477545 | ID=Msa1272750-mRNA-1:cds;Parent=Msa1272750-mRNA-1 |
| chr8_3 | CDS | 6478980 | 6479048 | 6478980 | ID=Msa1272750-mRNA-1:cds;Parent=Msa1272750-mRNA-1 |
| chr8_3 | CDS | 6479719 | 6479782 | 6479719 | ID=Msa1272750-mRNA-1:cds;Parent=Msa1272750-mRNA-1 |
| chr8_3 | CDS | 6480763 | 6480842 | 6480763 | ID=Msa1272750-mRNA-1:cds;Parent=Msa1272750-mRNA-1 |
| chr8_3 | CDS | 6480943 | 6481026 | 6480943 | ID=Msa1272750-mRNA-1:cds;Parent=Msa1272750-mRNA-1 |
| chr8_3 | CDS | 6481411 | 6481495 | 6481411 | ID=Msa1272750-mRNA-1:cds;Parent=Msa1272750-mRNA-1 |
| chr8_3 | CDS | 6481943 | 6482028 | 6481943 | ID=Msa1272750-mRNA-1:cds;Parent=Msa1272750-mRNA-1 |
| chr8_3 | CDS | 6483659 | 6483780 | 6483659 | ID=Msa1272750-mRNA-1:cds;Parent=Msa1272750-mRNA-1 |
| chr8_3 | CDS | 6484043 | 6484103 | 6484043 | ID=Msa1272750-mRNA-1:cds;Parent=Msa1272750-mRNA-1 |
| chr8_3 | CDS | 6484219 | 6484317 | 6484219 | ID=Msa1272750-mRNA-1:cds;Parent=Msa1272750-mRNA-1 |
| chr8_3 | CDS | 6484610 | 6484711 | 6484610 | ID=Msa1272750-mRNA-1:cds;Parent=Msa1272750-mRNA-1 |
| chr8_3 | CDS | 6484794 | 6484835 | 6484794 | ID=Msa1272750-mRNA-1:cds;Parent=Msa1272750-mRNA-1 |
| chr8_3 | CDS | 6484928 | 6485068 | 6484928 | ID=Msa1272750-mRNA-1:cds;Parent=Msa1272750-mRNA-1 |
| chr8_3 | three_prime_UTR | 6485069 | 6485396 | 6485069 | ID=Msa1272750-mRNA-1:three_prime_utr;Parent=Msa1272750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
