Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1450870 | sp|Q9LKJ1|HIBC1_ARATH | 66.845 | 374 | 121 | 2 | 9 | 382 | 8 | 378 | 0.0 | 541 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1450870 | A0A072TX02 | 98.429 | 382 | 6 | 0 | 1 | 382 | 1 | 382 | 0.0 | 782 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0026660 | Msa1450870 | 0.816842 | 4.488819e-52 | -8.615850e-47 |
Msa0036370 | Msa1450870 | 0.806579 | 7.681665e-50 | -8.615850e-47 |
Msa0047980 | Msa1450870 | 0.820333 | 7.248474e-53 | -8.615850e-47 |
Msa0115390 | Msa1450870 | 0.802738 | 4.866231e-49 | -8.615850e-47 |
Msa1381650 | Msa1450870 | 0.803337 | 3.657954e-49 | -8.615850e-47 |
Msa1397940 | Msa1450870 | 0.802389 | 5.740858e-49 | -8.615850e-47 |
Msa1431040 | Msa1450870 | 0.824748 | 6.823273e-54 | -8.615850e-47 |
Msa0608910 | Msa1450870 | 0.808123 | 3.614924e-50 | -8.615850e-47 |
Msa0625790 | Msa1450870 | 0.804559 | 2.038509e-49 | -8.615850e-47 |
Msa0646130 | Msa1450870 | 0.800566 | 1.357033e-48 | -8.615850e-47 |
Msa0669720 | Msa1450870 | 0.806398 | 8.387106e-50 | -8.615850e-47 |
Msa0726860 | Msa1450870 | 0.807258 | 5.520167e-50 | -8.615850e-47 |
Msa0743990 | Msa1450870 | 0.831920 | 1.269362e-55 | -8.615850e-47 |
Msa0792090 | Msa1450870 | 0.817410 | 3.345415e-52 | -8.615850e-47 |
Msa0794050 | Msa1450870 | 0.823608 | 1.263898e-53 | -8.615850e-47 |
Msa0794320 | Msa1450870 | 0.809824 | 1.562988e-50 | -8.615850e-47 |
Msa0797750 | Msa1450870 | 0.800144 | 1.653864e-48 | -8.615850e-47 |
Msa0814250 | Msa1450870 | 0.810834 | 9.463397e-51 | -8.615850e-47 |
Msa0833310 | Msa1450870 | 0.808573 | 2.898217e-50 | -8.615850e-47 |
Msa0127040 | Msa1450870 | 0.807387 | 5.180877e-50 | -8.615850e-47 |
Msa0138160 | Msa1450870 | 0.800172 | 1.632541e-48 | -8.615850e-47 |
Msa0145150 | Msa1450870 | 0.802032 | 6.799490e-49 | -8.615850e-47 |
Msa0175200 | Msa1450870 | 0.819168 | 1.337807e-52 | -8.615850e-47 |
Msa0176330 | Msa1450870 | 0.822220 | 2.661440e-53 | -8.615850e-47 |
Msa0236270 | Msa1450870 | 0.801575 | 8.439919e-49 | -8.615850e-47 |
Msa1253810 | Msa1450870 | 0.800561 | 1.360505e-48 | -8.615850e-47 |
Msa1272750 | Msa1450870 | 0.891743 | 3.004694e-74 | -8.615850e-47 |
Msa1293590 | Msa1450870 | 0.801949 | 7.072296e-49 | -8.615850e-47 |
Msa1296300 | Msa1450870 | 0.803675 | 3.112600e-49 | -8.615850e-47 |
Msa1299700 | Msa1450870 | 0.807668 | 4.516461e-50 | -8.615850e-47 |
Msa1332220 | Msa1450870 | 0.805057 | 1.604021e-49 | -8.615850e-47 |
Msa0432070 | Msa1450870 | 0.802010 | 6.872844e-49 | -8.615850e-47 |
Msa0479330 | Msa1450870 | 0.820920 | 5.314159e-53 | -8.615850e-47 |
Msa0260830 | Msa1450870 | 0.821180 | 4.631079e-53 | -8.615850e-47 |
Msa0284820 | Msa1450870 | 0.826186 | 3.114465e-54 | -8.615850e-47 |
Msa1126850 | Msa1450870 | 0.817182 | 3.764485e-52 | -8.615850e-47 |
Msa1144970 | Msa1450870 | 0.802181 | 6.337411e-49 | -8.615850e-47 |
Msa1165960 | Msa1450870 | 0.802077 | 6.657872e-49 | -8.615850e-47 |
Msa1178050 | Msa1450870 | 0.804210 | 2.409659e-49 | -8.615850e-47 |
Msa0585900 | Msa1450870 | 0.802290 | 6.016727e-49 | -8.615850e-47 |
Msa0590650 | Msa1450870 | 0.804010 | 2.652588e-49 | -8.615850e-47 |
Msa0864290 | Msa1450870 | 0.827412 | 1.587437e-54 | -8.615850e-47 |
Msa0905380 | Msa1450870 | 0.800615 | 1.326042e-48 | -8.615850e-47 |
Msa0937330 | Msa1450870 | 0.811281 | 7.571196e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1450870 | MtrunA17_Chr8g0337981 | 98.429 | 382 | 6 | 0 | 1 | 382 | 1 | 382 | 0.0 | 782 |
Msa1450870 | MtrunA17_Chr8g0334701 | 46.154 | 364 | 195 | 1 | 7 | 370 | 33 | 395 | 8.77e-113 | 335 |
Msa1450870 | MtrunA17_Chr1g0150221 | 46.398 | 347 | 186 | 0 | 9 | 355 | 42 | 388 | 2.45e-110 | 329 |
Msa1450870 | MtrunA17_Chr3g0095921 | 43.514 | 370 | 204 | 3 | 1 | 369 | 1 | 366 | 1.97e-100 | 303 |
Msa1450870 | MtrunA17_Chr8g0390721 | 36.034 | 358 | 207 | 10 | 22 | 360 | 58 | 412 | 3.21e-59 | 197 |
Msa1450870 | MtrunA17_Chr3g0122861 | 31.461 | 178 | 114 | 3 | 17 | 188 | 16 | 191 | 1.51e-14 | 73.2 |
Msa1450870 | MtrunA17_Chr4g0068451 | 29.947 | 187 | 122 | 4 | 12 | 196 | 7 | 186 | 6.33e-14 | 71.2 |
Msa1450870 | MtrunA17_Chr4g0055741 | 25.698 | 179 | 125 | 4 | 23 | 198 | 57 | 230 | 1.39e-12 | 67.8 |
Msa1450870 | MtrunA17_Chr8g0365881 | 28.671 | 143 | 96 | 3 | 23 | 163 | 81 | 219 | 4.43e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1450870 | AT5G65940.1 | 66.845 | 374 | 121 | 2 | 9 | 382 | 8 | 378 | 0.0 | 541 |
Msa1450870 | AT5G65940.4 | 66.845 | 374 | 121 | 2 | 9 | 382 | 8 | 378 | 0.0 | 541 |
Msa1450870 | AT5G65940.3 | 69.512 | 328 | 100 | 0 | 9 | 336 | 8 | 335 | 1.52e-179 | 502 |
Msa1450870 | AT2G30660.1 | 66.474 | 346 | 116 | 0 | 9 | 354 | 4 | 349 | 4.41e-179 | 503 |
Msa1450870 | AT2G30650.1 | 64.690 | 371 | 129 | 2 | 11 | 380 | 6 | 375 | 9.59e-179 | 502 |
Msa1450870 | AT5G65940.2 | 68.012 | 322 | 103 | 0 | 8 | 329 | 7 | 328 | 2.97e-170 | 478 |
Msa1450870 | AT2G30660.2 | 65.615 | 317 | 109 | 0 | 38 | 354 | 1 | 317 | 1.20e-161 | 457 |
Msa1450870 | AT2G30650.2 | 64.127 | 315 | 113 | 0 | 8 | 322 | 3 | 317 | 1.37e-149 | 426 |
Msa1450870 | AT4G31810.1 | 45.245 | 347 | 190 | 0 | 9 | 355 | 40 | 386 | 3.70e-107 | 321 |
Msa1450870 | AT3G60510.1 | 47.383 | 363 | 190 | 1 | 11 | 373 | 38 | 399 | 8.97e-106 | 317 |
Msa1450870 | AT3G60510.3 | 44.560 | 386 | 188 | 2 | 11 | 371 | 38 | 422 | 3.48e-100 | 304 |
Msa1450870 | AT1G06550.1 | 43.052 | 367 | 206 | 2 | 7 | 373 | 8 | 371 | 4.60e-100 | 302 |
Msa1450870 | AT3G60510.2 | 47.653 | 277 | 145 | 0 | 11 | 287 | 38 | 314 | 3.65e-80 | 249 |
Msa1450870 | AT3G24360.2 | 36.212 | 359 | 201 | 12 | 22 | 360 | 58 | 408 | 1.81e-61 | 203 |
Msa1450870 | AT4G13360.1 | 36.565 | 361 | 201 | 12 | 22 | 360 | 61 | 415 | 2.61e-61 | 203 |
Msa1450870 | AT3G24360.1 | 35.833 | 360 | 205 | 12 | 22 | 360 | 58 | 412 | 2.53e-59 | 198 |
Msa1450870 | AT3G24360.3 | 36.111 | 288 | 160 | 10 | 92 | 360 | 26 | 308 | 3.82e-48 | 166 |
Msa1450870 | AT3G24360.6 | 36.111 | 288 | 160 | 10 | 92 | 360 | 5 | 287 | 4.03e-48 | 165 |
Msa1450870 | AT3G24360.5 | 36.111 | 288 | 160 | 10 | 92 | 360 | 28 | 310 | 4.92e-48 | 166 |
Msa1450870 | AT3G24360.4 | 38.224 | 259 | 150 | 9 | 22 | 271 | 58 | 315 | 5.25e-42 | 150 |
Msa1450870 | AT4G16210.1 | 26.941 | 219 | 147 | 5 | 7 | 219 | 5 | 216 | 7.05e-14 | 71.6 |
Msa1450870 | AT5G43280.2 | 27.624 | 181 | 120 | 4 | 18 | 188 | 18 | 197 | 1.61e-11 | 63.9 |
Msa1450870 | AT5G43280.1 | 27.624 | 181 | 120 | 4 | 18 | 188 | 18 | 197 | 3.40e-11 | 63.9 |
Find 98 sgRNAs with CRISPR-Local
Find 512 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATGCTATTTCAAAGCTTTA+AGG | 0.111501 | tig0033130:-11737 | Msa1450870:exon |
AACTTAATGTTGTGATTCTT+TGG | 0.213448 | tig0033130:+11676 | None:intergenic |
ATAGCAGCACCCATCCATTT+TGG | 0.227060 | tig0033130:-19381 | Msa1450870:five_prime_UTR |
ATCCTTAACAAGCTCCAATT+TGG | 0.248004 | tig0033130:+11847 | None:intergenic |
GAGAGAGCATTCAATTGTTT+TGG | 0.250822 | tig0033130:+19109 | None:intergenic |
TTGCAGGTTTCAATTCTTAA+TGG | 0.257914 | tig0033130:-15828 | Msa1450870:intron |
GGAGAATATGTTGGTCTTAC+AGG | 0.259688 | tig0033130:-14845 | Msa1450870:CDS |
TATTAAAATTAAAATATTAC+TGG | 0.272905 | tig0033130:+19401 | None:intergenic |
AACATTTATCAAATTCAATA+AGG | 0.286065 | tig0033130:+11462 | None:intergenic |
AAATAATCCCAAAGCTGTTT+CGG | 0.303784 | tig0033130:+15341 | None:intergenic |
GTCAATAATTGCAGATACTA+TGG | 0.328804 | tig0033130:+13076 | None:intergenic |
TGCTATGCCCGAAACAGCTT+TGG | 0.328892 | tig0033130:-15349 | Msa1450870:CDS |
AATAATCCCAAAGCTGTTTC+GGG | 0.332057 | tig0033130:+15342 | None:intergenic |
ATTAGACAAGGCAGGCTCTT+AGG | 0.333895 | tig0033130:-12175 | Msa1450870:CDS |
CCTTGCTATGGTGTCCTTGT+AGG | 0.349526 | tig0033130:+12107 | None:intergenic |
GGCAAGTTGTTGAACCTCTT+GGG | 0.350616 | tig0033130:+11764 | None:intergenic |
TTAGTGGGATCCTTCCAAAT+TGG | 0.352371 | tig0033130:-11861 | Msa1450870:intron |
ATATAAAATGAATTATTTGA+TGG | 0.359065 | tig0033130:-15965 | Msa1450870:CDS |
AACATTAAGTTGATTCTTGA+AGG | 0.366901 | tig0033130:-11664 | Msa1450870:three_prime_UTR |
TTTCATATGGTATAGGTGAT+TGG | 0.369959 | tig0033130:-16017 | Msa1450870:intron |
GGAAGAGGAAGGACCCAAAA+TGG | 0.387237 | tig0033130:+19367 | None:intergenic |
GGTATAGGTGATTGGAGATT+TGG | 0.392868 | tig0033130:-16009 | Msa1450870:intron |
TGTTAAATTGATTGTCCTAA+AGG | 0.399260 | tig0033130:-17661 | Msa1450870:intron |
TGCACAGAAATTATCGTCAT+TGG | 0.403375 | tig0033130:-13135 | Msa1450870:intron |
TTCCAAATTGGAGCTTGTTA+AGG | 0.403393 | tig0033130:-11849 | Msa1450870:CDS |
ATCGTCATGGGAGGTGGCGC+TGG | 0.407520 | tig0033130:-15804 | Msa1450870:CDS |
AACCTGATCTTCATCCAGTT+TGG | 0.407756 | tig0033130:+19312 | None:intergenic |
TGTCGGAGATGCTTTCTTCA+AGG | 0.412605 | tig0033130:+12514 | None:intergenic |
GGTTACATTTATCAGGGAAA+TGG | 0.414501 | tig0033130:-17061 | Msa1450870:intron |
TGCTGAAGGATGGAAAGATT+TGG | 0.418826 | tig0033130:-11792 | Msa1450870:CDS |
TAATATGAGGCGCCTACATC+AGG | 0.422559 | tig0033130:+15318 | None:intergenic |
TATTATTTGTCTAGACTAGC+TGG | 0.430192 | tig0033130:-15300 | Msa1450870:CDS |
AGGACAATCAATTTAACATC+AGG | 0.430392 | tig0033130:+17666 | None:intergenic |
GCTATGCCCGAAACAGCTTT+GGG | 0.440444 | tig0033130:-15348 | Msa1450870:CDS |
TTTGGGTCCTTCCTCTTCCT+CGG | 0.454290 | tig0033130:-19363 | Msa1450870:five_prime_UTR |
CGCCAAACTGGATGAAGATC+AGG | 0.455421 | tig0033130:-19314 | Msa1450870:intron |
AGGCAAGTTGTTGAACCTCT+TGG | 0.459879 | tig0033130:+11763 | None:intergenic |
AGAGCAGCCTTCCCTAAAAC+AGG | 0.460836 | tig0033130:-13045 | Msa1450870:CDS |
TGATCTTCATCCAGTTTGGC+GGG | 0.473292 | tig0033130:+19316 | None:intergenic |
ATCTTCATCCAGTTTGGCGG+GGG | 0.486411 | tig0033130:+19318 | None:intergenic |
TTATATAAGATCAACTTGTT+CGG | 0.495881 | tig0033130:+11615 | None:intergenic |
CCATAGCAAGGATTTCTTCG+AGG | 0.511511 | tig0033130:-12095 | Msa1450870:intron |
AGTATGTAGCATACCGATGA+AGG | 0.512916 | tig0033130:+14767 | None:intergenic |
CTTACAGGTGCTAGGTTGGA+TGG | 0.513409 | tig0033130:-14830 | Msa1450870:CDS |
TTCTCTAAGCTTGATGCTGA+AGG | 0.514592 | tig0033130:-11806 | Msa1450870:CDS |
CTGATCTTCATCCAGTTTGG+CGG | 0.518696 | tig0033130:+19315 | None:intergenic |
AATGGAATCGTCATGGGAGG+TGG | 0.522285 | tig0033130:-15810 | Msa1450870:CDS |
AATTCTTAATGGAATCGTCA+TGG | 0.523281 | tig0033130:-15817 | Msa1450870:CDS |
TTGGGATTATTTCCTGATGT+AGG | 0.525045 | tig0033130:-15330 | Msa1450870:CDS |
ATAATTGCAGATACTATGGC+TGG | 0.526109 | tig0033130:+13080 | None:intergenic |
GTTGGTGAAGACCGAGGAAG+AGG | 0.528755 | tig0033130:+19352 | None:intergenic |
GATCTTCATCCAGTTTGGCG+GGG | 0.533241 | tig0033130:+19317 | None:intergenic |
CTATGAGTAAAGCAGATAGT+TGG | 0.533586 | tig0033130:-12556 | Msa1450870:CDS |
ATTCTTAATGGAATCGTCAT+GGG | 0.537888 | tig0033130:-15816 | Msa1450870:CDS |
TAGTCTAGACAAATAATATG+AGG | 0.540571 | tig0033130:+15305 | None:intergenic |
GAGGAAGGACCCAAAATGGA+TGG | 0.542392 | tig0033130:+19371 | None:intergenic |
GTGGATGTTAATTTCACCAA+AGG | 0.543624 | tig0033130:+11426 | None:intergenic |
CTATACTGATAGATAAAGAC+AGG | 0.546864 | tig0033130:-11981 | Msa1450870:CDS |
GGCGCTGGTGCTTCTATGCA+TGG | 0.548075 | tig0033130:-15789 | Msa1450870:CDS |
CTAAGCTTGATGCTGAAGGA+TGG | 0.548086 | tig0033130:-11802 | Msa1450870:CDS |
AGAAATATTTCACGATGATG+AGG | 0.552047 | tig0033130:-17694 | Msa1450870:CDS |
CCTCGAAGAAATCCTTGCTA+TGG | 0.552990 | tig0033130:+12095 | None:intergenic |
AACAGGATAGTGTTTATCAC+AGG | 0.554120 | tig0033130:-13028 | Msa1450870:intron |
TTAACAAGCTCCAATTTGGA+AGG | 0.557519 | tig0033130:+11851 | None:intergenic |
CAATTCTATACTCGTAAACA+AGG | 0.558815 | tig0033130:+12140 | None:intergenic |
TGGTCTTACAGGTGCTAGGT+TGG | 0.559352 | tig0033130:-14834 | Msa1450870:CDS |
CAAATTGCAGGAGAATATGT+TGG | 0.561540 | tig0033130:-14854 | Msa1450870:intron |
CAAGGCAGGCTCTTAGGTGT+TGG | 0.562954 | tig0033130:-12169 | Msa1450870:CDS |
TAATCAATAAGTGTTTCTCT+AGG | 0.569952 | tig0033130:-12734 | Msa1450870:CDS |
GGCAACATACAGTAAGCCTC+AGG | 0.571282 | tig0033130:-15944 | Msa1450870:intron |
GCAAGTTGTTGAACCTCTTG+GGG | 0.573050 | tig0033130:+11765 | None:intergenic |
ACATTTATCAGGGAAATGGA+AGG | 0.587193 | tig0033130:-17057 | Msa1450870:intron |
ATGTTGGTCTTACAGGTGCT+AGG | 0.591347 | tig0033130:-14838 | Msa1450870:CDS |
TCACCAAAGGAAAACACGAA+TGG | 0.592926 | tig0033130:+11439 | None:intergenic |
GAAATATTTCACGATGATGA+GGG | 0.593731 | tig0033130:-17693 | Msa1450870:CDS |
CATTTATCAGGGAAATGGAA+GGG | 0.594293 | tig0033130:-17056 | Msa1450870:intron |
ATTGTTTGTCATATCCTACA+AGG | 0.594529 | tig0033130:-12121 | Msa1450870:CDS |
TAAAGCTTTGAAATAGCATG+TGG | 0.595907 | tig0033130:+11740 | None:intergenic |
GGTGCAGAAATGCTTGCTTG+TGG | 0.601628 | tig0033130:-14809 | Msa1450870:CDS |
GTATTGTGCAAAGGTTCTGG+TGG | 0.605879 | tig0033130:-19170 | Msa1450870:intron |
ATCAACAATCTCATCAGTTG+AGG | 0.610947 | tig0033130:-11713 | Msa1450870:three_prime_UTR |
AGCTTTGAAATAGCATGTGG+AGG | 0.613403 | tig0033130:+11743 | None:intergenic |
GTGAAGACCGAGGAAGAGGA+AGG | 0.614974 | tig0033130:+19356 | None:intergenic |
ATTGGAAGAATCATTATGCA+AGG | 0.625818 | tig0033130:-13117 | Msa1450870:CDS |
GTATGTAGCATACCGATGAA+GGG | 0.626747 | tig0033130:+14768 | None:intergenic |
AGGAAGGACCCAAAATGGAT+GGG | 0.627598 | tig0033130:+19372 | None:intergenic |
GTTGCTAATGACGCAAGAGG+AGG | 0.628706 | tig0033130:-17004 | Msa1450870:intron |
TCGGTCTTCACCAACGACCA+TGG | 0.637430 | tig0033130:-19344 | Msa1450870:exon |
TTTCATCGAGACCACATCAG+TGG | 0.638922 | tig0033130:+11407 | None:intergenic |
AGATAAAGACAGGAAACCAA+AGG | 0.644265 | tig0033130:-11971 | Msa1450870:intron |
GCTGTTGCTAATGACGCAAG+AGG | 0.648895 | tig0033130:-17007 | Msa1450870:CDS |
GAAATTAACATCCACTGATG+TGG | 0.660086 | tig0033130:-11418 | Msa1450870:three_prime_UTR |
CTTAATGGAATCGTCATGGG+AGG | 0.671508 | tig0033130:-15813 | Msa1450870:CDS |
CCTACAAGGACACCATAGCA+AGG | 0.672173 | tig0033130:-12107 | Msa1450870:CDS |
GGAAGAATCATTATGCAAGG+TGG | 0.673416 | tig0033130:-13114 | Msa1450870:CDS |
AAGATTTGGAGTTCCCCAAG+AGG | 0.673816 | tig0033130:-11778 | Msa1450870:CDS |
GTGTTTCTCTAGGAAAACAG+TGG | 0.677969 | tig0033130:-12724 | Msa1450870:CDS |
ATGGTCGTTGGTGAAGACCG+AGG | 0.702491 | tig0033130:+19346 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAATAACTAATGTATT+TGG | + | tig0033130:11455-11474 | None:intergenic | 10.0% |
!!! | TTATTTTTAAATATTTGTAC+TGG | - | tig0033130:13009-13028 | Msa1450870:intron | 10.0% |
!! | TAGTTAAAAAAAAATGTAAT+TGG | - | tig0033130:13365-13384 | Msa1450870:intron | 10.0% |
!!! | ATTAATTATTTGTTTTCATA+TGG | - | tig0033130:14867-14886 | Msa1450870:intron | 10.0% |
!! | ATATAAAATGAATTATTTGA+TGG | - | tig0033130:14932-14951 | Msa1450870:intron | 10.0% |
!!! | GATTTTGATATAATTTATTT+TGG | + | tig0033130:17103-17122 | None:intergenic | 10.0% |
!! | AAAGTAAGAAAAAAAATTAA+TGG | + | tig0033130:18585-18604 | None:intergenic | 10.0% |
!!! | TATTTGTATTGTATTTATTT+TGG | - | tig0033130:18990-19009 | Msa1450870:intron | 10.0% |
!!! | TAAGTATTTTTATTTCCTTT+TGG | - | tig0033130:12940-12959 | Msa1450870:intron | 15.0% |
!! | TATTAAATGATTCAGTTATT+AGG | - | tig0033130:14094-14113 | Msa1450870:intron | 15.0% |
!! | TTTAGTTATTATAAAGGATT+AGG | + | tig0033130:15210-15229 | None:intergenic | 15.0% |
!! | AAGTTAAGTAAATGAAAATT+TGG | + | tig0033130:15494-15513 | None:intergenic | 15.0% |
!!! | TTTCATTTACTTAACTTTTA+TGG | - | tig0033130:15497-15516 | Msa1450870:intron | 15.0% |
!! | GTGAAATAACTTTAAATTAA+AGG | + | tig0033130:16820-16839 | None:intergenic | 15.0% |
!! | TTGTAACATTTAATACTTTA+TGG | + | tig0033130:18441-18460 | None:intergenic | 15.0% |
!! | AATTACAAAATATCTAAATC+TGG | + | tig0033130:18542-18561 | None:intergenic | 15.0% |
!! | TAGTAAGAAAAATTGAAAAT+TGG | + | tig0033130:18660-18679 | None:intergenic | 15.0% |
!! | AACATTTATCAAATTCAATA+AGG | + | tig0033130:19438-19457 | None:intergenic | 15.0% |
!! | AATGTAAAATTATGCATGTT+TGG | - | tig0033130:12118-12137 | Msa1450870:CDS | 20.0% |
!!! | AAAATTGATTTTGACATGTT+TGG | + | tig0033130:12248-12267 | None:intergenic | 20.0% |
!! | TTAATTTCATTGTAATGTGA+TGG | - | tig0033130:12626-12645 | Msa1450870:intron | 20.0% |
!! | TTGATCCAAAATAATATAGA+TGG | + | tig0033130:12785-12804 | None:intergenic | 20.0% |
!!! | AATGAATTTTTCAAATTCTG+AGG | - | tig0033130:12835-12854 | Msa1450870:intron | 20.0% |
!! | ATAAGTAAGAGAATAGAAAA+TGG | + | tig0033130:13137-13156 | None:intergenic | 20.0% |
!! | AAAATTAAATGGAAAATGCT+CGG | + | tig0033130:13275-13294 | None:intergenic | 20.0% |
!! | GCAAAATGCAAAAAATTAAA+TGG | + | tig0033130:13286-13305 | None:intergenic | 20.0% |
!!! | TGTGTTTTATCTATAAAAGA+GGG | + | tig0033130:13419-13438 | None:intergenic | 20.0% |
!!! | TTACTACTAATTGGTTTTAA+TGG | + | tig0033130:13504-13523 | None:intergenic | 20.0% |
!! | TTTATTAGGTTACTACTAAT+TGG | + | tig0033130:13513-13532 | None:intergenic | 20.0% |
!! | TAGTAACCTAATAAATATTG+AGG | - | tig0033130:13518-13537 | Msa1450870:intron | 20.0% |
!! | AGTAACCTAATAAATATTGA+GGG | - | tig0033130:13519-13538 | Msa1450870:intron | 20.0% |
!! | TACATTCTATGTTAAGAAAA+GGG | - | tig0033130:13658-13677 | Msa1450870:intron | 20.0% |
!!! | AATATGGATTTTCTTACTTT+AGG | - | tig0033130:13815-13834 | Msa1450870:intron | 20.0% |
!! | GTTTGATGAATTGAAAATAA+AGG | + | tig0033130:13928-13947 | None:intergenic | 20.0% |
!! | CAAGAATGCAATTAATATTA+TGG | + | tig0033130:13964-13983 | None:intergenic | 20.0% |
!! | AATAAAATAACAATGAGTGA+TGG | + | tig0033130:14078-14097 | None:intergenic | 20.0% |
!!! | TTTTGTAAAAGTATGGTTTT+TGG | + | tig0033130:14280-14299 | None:intergenic | 20.0% |
!!! | TATTTGTTTTCATATGGTAT+AGG | - | tig0033130:14873-14892 | Msa1450870:intron | 20.0% |
!!! | TCACTGTTTTTTTCTTTTTT+TGG | + | tig0033130:15413-15432 | None:intergenic | 20.0% |
!! | AAAAAGAAAAAAACAGTGAT+AGG | - | tig0033130:15414-15433 | Msa1450870:intron | 20.0% |
!! | TCTCTATGATTGATTATAAT+TGG | - | tig0033130:15649-15668 | Msa1450870:intron | 20.0% |
!! | CTCTATGATTGATTATAATT+GGG | - | tig0033130:15650-15669 | Msa1450870:intron | 20.0% |
!! | AAGTTTATCATGAAATATCT+AGG | - | tig0033130:16302-16321 | Msa1450870:intron | 20.0% |
!! | AGTTTATCATGAAATATCTA+GGG | - | tig0033130:16303-16322 | Msa1450870:intron | 20.0% |
!! | TAAATTAAAGGAAATGACAA+AGG | + | tig0033130:16808-16827 | None:intergenic | 20.0% |
!! | ATATACAATTTGTGAAGATT+AGG | - | tig0033130:17357-17376 | Msa1450870:intron | 20.0% |
!! | TATATGATGTTAAAACTCTT+TGG | - | tig0033130:17691-17710 | Msa1450870:CDS | 20.0% |
!! | AATATTGCGTGATAAAATTA+TGG | + | tig0033130:18309-18328 | None:intergenic | 20.0% |
!!! | TAATTTTATCACGCAATATT+AGG | - | tig0033130:18309-18328 | Msa1450870:intron | 20.0% |
!! | AAAAAAATTAATGGCTTAAG+AGG | + | tig0033130:18576-18595 | None:intergenic | 20.0% |
!! | GAAAAATTGAAAATTGGAAA+AGG | + | tig0033130:18654-18673 | None:intergenic | 20.0% |
!! | AACTAATTTATGTCTAGTTA+TGG | + | tig0033130:18959-18978 | None:intergenic | 20.0% |
!!! | TTATATAAGATCAACTTGTT+CGG | + | tig0033130:19285-19304 | None:intergenic | 20.0% |
! | TCAATATCACTTTCATTCAT+CGG | - | tig0033130:11647-11666 | Msa1450870:three_prime_UTR | 25.0% |
!!! | AACTGATTCTACCTATTTTT+TGG | - | tig0033130:11705-11724 | Msa1450870:three_prime_UTR | 25.0% |
! | TTTGCACAATACCAAAAAAT+AGG | + | tig0033130:11719-11738 | None:intergenic | 25.0% |
!!! | TATTTTTTGGTATTGTGCAA+AGG | - | tig0033130:11718-11737 | Msa1450870:three_prime_UTR | 25.0% |
!!! | ATTTTAACTAACGGAATCAA+AGG | + | tig0033130:11915-11934 | None:intergenic | 25.0% |
!!! | CGAGAATCAATTTTAACTAA+CGG | + | tig0033130:11924-11943 | None:intergenic | 25.0% |
!! | TTAGTTAAAATTGATTCTCG+AGG | - | tig0033130:11924-11943 | Msa1450870:intron | 25.0% |
!!! | CTAGAATTGATTTTTTCACA+CGG | - | tig0033130:12026-12045 | Msa1450870:intron | 25.0% |
! | GACTAAACATAATTTATACG+TGG | + | tig0033130:12150-12169 | None:intergenic | 25.0% |
!! | ATTAATTTGAAGATGAAGCT+AGG | + | tig0033130:12188-12207 | None:intergenic | 25.0% |
! | CTTCATCTTCAAATTAATTC+TGG | - | tig0033130:12190-12209 | Msa1450870:intron | 25.0% |
! | AATATATTTGAGCCTATGTT+TGG | + | tig0033130:12298-12317 | None:intergenic | 25.0% |
! | AAGATAACGTGATTTATGTT+TGG | + | tig0033130:12348-12367 | None:intergenic | 25.0% |
! | CAATTACTTCAGAAATAAGT+GGG | + | tig0033130:12659-12678 | None:intergenic | 25.0% |
! | ACAATAATTAAAGGCTAAGA+GGG | + | tig0033130:12741-12760 | None:intergenic | 25.0% |
! | TGTCACAAGACAATAATTAA+AGG | + | tig0033130:12750-12769 | None:intergenic | 25.0% |
!! | TCTAGCCATCTATATTATTT+TGG | - | tig0033130:12777-12796 | Msa1450870:intron | 25.0% |
!! | GATGACATTTTTGTCATTAT+TGG | + | tig0033130:12972-12991 | None:intergenic | 25.0% |
!!! | TTTTTTGAAAGAGTTCAAAC+AGG | + | tig0033130:13086-13105 | None:intergenic | 25.0% |
! | TTCTATTCTCTTACTTATCT+TGG | - | tig0033130:13139-13158 | Msa1450870:intron | 25.0% |
! | TGTTAAATTGATTGTCCTAA+AGG | - | tig0033130:13236-13255 | Msa1450870:intron | 25.0% |
!! | GTGTGTTTTATCTATAAAAG+AGG | + | tig0033130:13420-13439 | None:intergenic | 25.0% |
! | TCTTAACATAGAATGTACAT+CGG | + | tig0033130:13655-13674 | None:intergenic | 25.0% |
! | GTACATTCTATGTTAAGAAA+AGG | - | tig0033130:13657-13676 | Msa1450870:intron | 25.0% |
!! | TACTTTAGGTTACATTTATC+AGG | - | tig0033130:13829-13848 | Msa1450870:intron | 25.0% |
!! | ACTTTAGGTTACATTTATCA+GGG | - | tig0033130:13830-13849 | Msa1450870:intron | 25.0% |
! | ATTATCAGTAACCATACATA+GGG | - | tig0033130:14117-14136 | Msa1450870:intron | 25.0% |
! | CAACTTGAAATAAAAAGACT+TGG | + | tig0033130:14232-14251 | None:intergenic | 25.0% |
!!! | CAAGTCTTTTTATTTCAAGT+TGG | - | tig0033130:14230-14249 | Msa1450870:intron | 25.0% |
!! | CTAAGGTTTTTGTAAAAGTA+TGG | + | tig0033130:14287-14306 | None:intergenic | 25.0% |
!! | CATACTTTTACAAAAACCTT+AGG | - | tig0033130:14285-14304 | Msa1450870:intron | 25.0% |
! | TACTAACATGAATGTAATGA+AGG | + | tig0033130:14381-14400 | None:intergenic | 25.0% |
! | TATCCCAAAATACATTGTAA+GGG | + | tig0033130:14675-14694 | None:intergenic | 25.0% |
! | TTATCCCAAAATACATTGTA+AGG | + | tig0033130:14676-14695 | None:intergenic | 25.0% |
! | TGTTGCAATCTTAATTTAAG+AGG | - | tig0033130:14736-14755 | Msa1450870:intron | 25.0% |
! | GTTGCAATCTTAATTTAAGA+GGG | - | tig0033130:14737-14756 | Msa1450870:intron | 25.0% |
!! | AACAAAACTTACTGTTTTCT+CGG | + | tig0033130:15151-15170 | None:intergenic | 25.0% |
!! | GAGATAATTTAAGATACTCT+AGG | - | tig0033130:15251-15270 | Msa1450870:intron | 25.0% |
! | ATACCTTTGACATTATGTTA+TGG | + | tig0033130:15311-15330 | None:intergenic | 25.0% |
! | ATTTGGATGCTAAATAGATA+GGG | + | tig0033130:15477-15496 | None:intergenic | 25.0% |
! | AATTTGGATGCTAAATAGAT+AGG | + | tig0033130:15478-15497 | None:intergenic | 25.0% |
! | TAGTCTAGACAAATAATATG+AGG | + | tig0033130:15595-15614 | None:intergenic | 25.0% |
! | ATCAAAATCAAATACTTCCA+TGG | - | tig0033130:15919-15938 | Msa1450870:intron | 25.0% |
!!! | TCATAATCAAAAGTATTCCA+TGG | + | tig0033130:15939-15958 | None:intergenic | 25.0% |
!!! | TCCTATTTTTTCTTTCCTTT+TGG | - | tig0033130:16016-16035 | Msa1450870:intron | 25.0% |
! | TCCAAAAGGAAAGAAAAAAT+AGG | + | tig0033130:16020-16039 | None:intergenic | 25.0% |
!!! | TACAGTTTTTTAAGGATTGT+AGG | + | tig0033130:16536-16555 | None:intergenic | 25.0% |
! | AGTGCAACATTATATAATCA+GGG | + | tig0033130:16591-16610 | None:intergenic | 25.0% |
! | TAAGAAAATGGAAAAAGTGA+AGG | + | tig0033130:16747-16766 | None:intergenic | 25.0% |
! | TGGAAAACGTATTAAGAAAA+TGG | + | tig0033130:16759-16778 | None:intergenic | 25.0% |
!! | GAAAGTATATAATGTAGACA+TGG | + | tig0033130:16779-16798 | None:intergenic | 25.0% |
! | ATCAAGCATACAAATCAATT+TGG | + | tig0033130:16925-16944 | None:intergenic | 25.0% |
! | AAGTAATTCTGACTATAAGT+TGG | + | tig0033130:17076-17095 | None:intergenic | 25.0% |
! | AAAGAAATTAAGTGTGTGTT+TGG | + | tig0033130:17145-17164 | None:intergenic | 25.0% |
!! | GAGATTCATTTTAAACAAGA+TGG | - | tig0033130:17553-17572 | Msa1450870:intron | 25.0% |
!!! | TGCACAATTTTTTTTCCTTA+AGG | - | tig0033130:17657-17676 | Msa1450870:intron | 25.0% |
!!! | TTTTTTTTCCTTAAGGACTA+TGG | - | tig0033130:17664-17683 | Msa1450870:CDS | 25.0% |
! | TATAAATACCATAGTCCTTA+AGG | + | tig0033130:17675-17694 | None:intergenic | 25.0% |
!! | ATGTTAAAACTCTTTGGTTT+GGG | - | tig0033130:17697-17716 | Msa1450870:CDS | 25.0% |
!! | ATAAACACTATCCTGTTTTA+GGG | + | tig0033130:17866-17885 | None:intergenic | 25.0% |
! | ACAATTGAAACATATCACAT+TGG | - | tig0033130:18078-18097 | Msa1450870:intron | 25.0% |
! | TAAGCAAATAGAAAGAAGAA+AGG | + | tig0033130:18116-18135 | None:intergenic | 25.0% |
! | TAATCAATAAGTGTTTCTCT+AGG | - | tig0033130:18163-18182 | Msa1450870:intron | 25.0% |
! | CCAATCTAAGAAAAACTTTA+AGG | + | tig0033130:18411-18430 | None:intergenic | 25.0% |
!! | CCTTAAAGTTTTTCTTAGAT+TGG | - | tig0033130:18408-18427 | Msa1450870:intron | 25.0% |
! | CGTTAAAACTGACAATAAAA+AGG | + | tig0033130:18489-18508 | None:intergenic | 25.0% |
! | ATTGAAAATTGGAAAAGGAT+TGG | + | tig0033130:18649-18668 | None:intergenic | 25.0% |
! | TGATTTAATGTCATACTCAA+TGG | - | tig0033130:18867-18886 | Msa1450870:intron | 25.0% |
! | ATTGATTATGCCTTTATTAG+TGG | - | tig0033130:19020-19039 | Msa1450870:intron | 25.0% |
! | TTGATTATGCCTTTATTAGT+GGG | - | tig0033130:19021-19040 | Msa1450870:intron | 25.0% |
! | AACTTAATGTTGTGATTCTT+TGG | + | tig0033130:19224-19243 | None:intergenic | 25.0% |
!!! | AACATTAAGTTGATTCTTGA+AGG | - | tig0033130:19233-19252 | Msa1450870:intron | 25.0% |
!! | ATCAACTAATTTTTGTTGAC+AGG | + | tig0033130:19353-19372 | None:intergenic | 25.0% |
! | GAATGCTCTCTCTTTTTATA+TGG | - | tig0033130:11799-11818 | Msa1450870:CDS | 30.0% |
! | ATTTTTACTCCTCCAAACAT+AGG | - | tig0033130:12283-12302 | Msa1450870:intron | 30.0% |
CTAGAATCAATTTCTGATGT+AGG | + | tig0033130:12542-12561 | None:intergenic | 30.0% | |
GCAATTACTTCAGAAATAAG+TGG | + | tig0033130:12660-12679 | None:intergenic | 30.0% | |
GACAATAATTAAAGGCTAAG+AGG | + | tig0033130:12742-12761 | None:intergenic | 30.0% | |
CATTATTGGTGAAAACCAAA+AGG | + | tig0033130:12958-12977 | None:intergenic | 30.0% | |
AAAGAGTTCAAACAGGTAAA+TGG | + | tig0033130:13079-13098 | None:intergenic | 30.0% | |
AGAAATATTTCACGATGATG+AGG | - | tig0033130:13203-13222 | Msa1450870:intron | 30.0% | |
GAAATATTTCACGATGATGA+GGG | - | tig0033130:13204-13223 | Msa1450870:intron | 30.0% | |
AGGACAATCAATTTAACATC+AGG | + | tig0033130:13234-13253 | None:intergenic | 30.0% | |
GGTAAATGGAAATTACCTTT+AGG | + | tig0033130:13254-13273 | None:intergenic | 30.0% | |
!!! | TGCATTTTGCTATTGTTCTA+TGG | - | tig0033130:13296-13315 | Msa1450870:intron | 30.0% |
GGAAAAGAGAGAATAACAAT+TGG | - | tig0033130:13317-13336 | Msa1450870:intron | 30.0% | |
!!! | TACTAATTGGTTTTAATGGC+AGG | + | tig0033130:13500-13519 | None:intergenic | 30.0% |
TGAGTCCCTCAATATTTATT+AGG | + | tig0033130:13527-13546 | None:intergenic | 30.0% | |
TCTCATCTCAATATGAATTC+TGG | - | tig0033130:13572-13591 | Msa1450870:intron | 30.0% | |
GATTATCAGTAACCATACAT+AGG | - | tig0033130:14116-14135 | Msa1450870:intron | 30.0% | |
TTATCAGTAACCATACATAG+GGG | - | tig0033130:14118-14137 | Msa1450870:intron | 30.0% | |
TAAAACATAACCCCTATGTA+TGG | + | tig0033130:14131-14150 | None:intergenic | 30.0% | |
! | ATACATAGGGGTTATGTTTT+AGG | - | tig0033130:14130-14149 | Msa1450870:intron | 30.0% |
TAATGAAAAACGACCATGTT+TGG | - | tig0033130:14176-14195 | Msa1450870:intron | 30.0% | |
ATAGATGATAGTTCCAAACA+TGG | + | tig0033130:14192-14211 | None:intergenic | 30.0% | |
TAACCTCAATACTATGTTGA+TGG | - | tig0033130:14348-14367 | Msa1450870:intron | 30.0% | |
AACAGAAATAAAAGTCACCA+GGG | + | tig0033130:14611-14630 | None:intergenic | 30.0% | |
AAACAGAAATAAAAGTCACC+AGG | + | tig0033130:14612-14631 | None:intergenic | 30.0% | |
!!! | GGTGACTTTTATTTCTGTTT+TGG | - | tig0033130:14612-14631 | Msa1450870:intron | 30.0% |
!!! | GACTTTTATTTCTGTTTTGG+TGG | - | tig0033130:14615-14634 | Msa1450870:intron | 30.0% |
ATCCCAAAATACATTGTAAG+GGG | + | tig0033130:14674-14693 | None:intergenic | 30.0% | |
! | TTTTATATTCTCCTCCCATA+AGG | + | tig0033130:14802-14821 | None:intergenic | 30.0% |
TTTCATATGGTATAGGTGAT+TGG | - | tig0033130:14880-14899 | Msa1450870:intron | 30.0% | |
ATTTGTTTCCAAACATTTGC+AGG | - | tig0033130:15053-15072 | Msa1450870:intron | 30.0% | |
AATTGAAACCTGCAAATGTT+TGG | + | tig0033130:15064-15083 | None:intergenic | 30.0% | |
TTGCAGGTTTCAATTCTTAA+TGG | - | tig0033130:15069-15088 | Msa1450870:intron | 30.0% | |
AATTCTTAATGGAATCGTCA+TGG | - | tig0033130:15080-15099 | Msa1450870:intron | 30.0% | |
ATTCTTAATGGAATCGTCAT+GGG | - | tig0033130:15081-15100 | Msa1450870:intron | 30.0% | |
ATGCCATAACATAATGTCAA+AGG | - | tig0033130:15305-15324 | Msa1450870:CDS | 30.0% | |
AAACAAATTTCCTACAACAG+TGG | + | tig0033130:15385-15404 | None:intergenic | 30.0% | |
! | AACTTTTATGGTTGTACTTG+TGG | - | tig0033130:15509-15528 | Msa1450870:intron | 30.0% |
AAATAATCCCAAAGCTGTTT+CGG | + | tig0033130:15559-15578 | None:intergenic | 30.0% | |
TATTATTTGTCTAGACTAGC+TGG | - | tig0033130:15597-15616 | Msa1450870:intron | 30.0% | |
! | TCCAATCTTTTCATCGTTTT+TGG | - | tig0033130:15700-15719 | Msa1450870:intron | 30.0% |
ATTGTTTACTTTCTCTTGCA+TGG | - | tig0033130:15883-15902 | Msa1450870:intron | 30.0% | |
AGGAAAGAAAAAATAGGAGA+CGG | + | tig0033130:16014-16033 | None:intergenic | 30.0% | |
! | TCATAAGAAGTGTACATTCA+TGG | - | tig0033130:16218-16237 | Msa1450870:intron | 30.0% |
! | CATAAGAAGTGTACATTCAT+GGG | - | tig0033130:16219-16238 | Msa1450870:intron | 30.0% |
! | TGAAAACCATTGGTTAACAA+TGG | + | tig0033130:16268-16287 | None:intergenic | 30.0% |
! | ATTGTTAACCAATGGTTTTC+AGG | - | tig0033130:16267-16286 | Msa1450870:intron | 30.0% |
!! | TGTGAATTTTAATAGACCAG+GGG | + | tig0033130:16513-16532 | None:intergenic | 30.0% |
!! | GTGTGAATTTTAATAGACCA+GGG | + | tig0033130:16514-16533 | None:intergenic | 30.0% |
!!! | GTTCATGGTACAGTTTTTTA+AGG | + | tig0033130:16544-16563 | None:intergenic | 30.0% |
TGCAACATTATATAATCAGG+GGG | + | tig0033130:16589-16608 | None:intergenic | 30.0% | |
GTGCAACATTATATAATCAG+GGG | + | tig0033130:16590-16609 | None:intergenic | 30.0% | |
GAGTGCAACATTATATAATC+AGG | + | tig0033130:16592-16611 | None:intergenic | 30.0% | |
AAATGGAAAAAGTGAAGGAA+GGG | + | tig0033130:16742-16761 | None:intergenic | 30.0% | |
AAAATGGAAAAAGTGAAGGA+AGG | + | tig0033130:16743-16762 | None:intergenic | 30.0% | |
AAGGAAATGACAAAGGATAA+AGG | + | tig0033130:16801-16820 | None:intergenic | 30.0% | |
! | GTGTTATTCTAGTGTATGTT+TGG | - | tig0033130:16861-16880 | Msa1450870:intron | 30.0% |
AATTGTAATCCTTCCAAAAG+TGG | + | tig0033130:16889-16908 | None:intergenic | 30.0% | |
TGATTGTTGTCGAATAGAAT+TGG | - | tig0033130:16941-16960 | Msa1450870:intron | 30.0% | |
!!! | AAATTTTAGAACTTCCCCAA+TGG | + | tig0033130:17252-17271 | None:intergenic | 30.0% |
! | TATGCATGTAAACTTTTGAG+TGG | - | tig0033130:17408-17427 | Msa1450870:intron | 30.0% |
CATTGAAACTGTTGAAAGTA+AGG | + | tig0033130:17598-17617 | None:intergenic | 30.0% | |
CTTACTTTCAACAGTTTCAA+TGG | - | tig0033130:17596-17615 | Msa1450870:intron | 30.0% | |
GATGTTAAAACTCTTTGGTT+TGG | - | tig0033130:17696-17715 | Msa1450870:CDS | 30.0% | |
!! | TGTTAAAACTCTTTGGTTTG+GGG | - | tig0033130:17698-17717 | Msa1450870:CDS | 30.0% |
TTGCAAAAGGCAATAAAACA+GGG | + | tig0033130:17738-17757 | None:intergenic | 30.0% | |
ATTGCAAAAGGCAATAAAAC+AGG | + | tig0033130:17739-17758 | None:intergenic | 30.0% | |
ATTGGAAGAATCATTATGCA+AGG | - | tig0033130:17780-17799 | Msa1450870:intron | 30.0% | |
GTCAATAATTGCAGATACTA+TGG | + | tig0033130:17824-17843 | None:intergenic | 30.0% | |
! | GATAAACACTATCCTGTTTT+AGG | + | tig0033130:17867-17886 | None:intergenic | 30.0% |
TATTGTCTGTTAAATTCCCT+TGG | - | tig0033130:17929-17948 | Msa1450870:intron | 30.0% | |
ATTGTCTGTTAAATTCCCTT+GGG | - | tig0033130:17930-17949 | Msa1450870:intron | 30.0% | |
ATGACATGTAATTTGACAGA+CGG | + | tig0033130:17967-17986 | None:intergenic | 30.0% | |
TCATAAACATATATCTGTCC+TGG | - | tig0033130:17983-18002 | Msa1450870:intron | 30.0% | |
CATAAACATATATCTGTCCT+GGG | - | tig0033130:17984-18003 | Msa1450870:intron | 30.0% | |
!! | AGAAAAACTTTAAGGCTTGT+CGG | + | tig0033130:18403-18422 | None:intergenic | 30.0% |
! | TTACCTTTTCAGATTAGACA+AGG | - | tig0033130:18710-18729 | Msa1450870:intron | 30.0% |
CAATTCTATACTCGTAAACA+AGG | + | tig0033130:18760-18779 | None:intergenic | 30.0% | |
ATTGTTTGTCATATCCTACA+AGG | - | tig0033130:18776-18795 | Msa1450870:intron | 30.0% | |
GAAACATGTGTATGAATTGT+TGG | + | tig0033130:18832-18851 | None:intergenic | 30.0% | |
CTATACTGATAGATAAAGAC+AGG | - | tig0033130:18916-18935 | Msa1450870:intron | 30.0% | |
!! | TAAAGCTTTGAAATAGCATG+TGG | + | tig0033130:19160-19179 | None:intergenic | 30.0% |
!! | CATGCTATTTCAAAGCTTTA+AGG | - | tig0033130:19160-19179 | Msa1450870:CDS | 30.0% |
AATAGGTAGAATCAGTTTCG+AGG | + | tig0033130:11702-11721 | None:intergenic | 35.0% | |
!!! | GAGAGAGCATTCAATTGTTT+TGG | + | tig0033130:11791-11810 | None:intergenic | 35.0% |
! | TTTTTCACACGGTGTATACT+TGG | - | tig0033130:12037-12056 | Msa1450870:intron | 35.0% |
ATATTTGAGCCTATGTTTGG+AGG | + | tig0033130:12295-12314 | None:intergenic | 35.0% | |
!! | GAACATTTAGCTTTCGTGTT+TGG | - | tig0033130:12440-12459 | Msa1450870:intron | 35.0% |
TGACAGGATGTAAAGATGTT+TGG | - | tig0033130:12513-12532 | Msa1450870:CDS | 35.0% | |
! | GAATCAATTCCAAGCCATTT+TGG | + | tig0033130:12606-12625 | None:intergenic | 35.0% |
AAAACCACATGAAGATGTGT+TGG | - | tig0033130:12686-12705 | Msa1450870:intron | 35.0% | |
AAACCACATGAAGATGTGTT+GGG | - | tig0033130:12687-12706 | Msa1450870:intron | 35.0% | |
AAACTAAATGCACTCTTCAG+TGG | + | tig0033130:12917-12936 | None:intergenic | 35.0% | |
TTCAAACAGGTAAATGGAAG+AGG | + | tig0033130:13073-13092 | None:intergenic | 35.0% | |
GTAGCTTAGATACCTATAAC+AGG | + | tig0033130:13182-13201 | None:intergenic | 35.0% | |
AATGGAAAATGCTCGGTAAA+TGG | + | tig0033130:13268-13287 | None:intergenic | 35.0% | |
ATTAAAATATGACATCCCCG+AGG | - | tig0033130:13462-13481 | Msa1450870:intron | 35.0% | |
TTAAAATATGACATCCCCGA+GGG | - | tig0033130:13463-13482 | Msa1450870:intron | 35.0% | |
ATGCACGTATGTTTCTCATT+AGG | - | tig0033130:13713-13732 | Msa1450870:intron | 35.0% | |
TCTCATCTTCGAAGAGAATA+TGG | - | tig0033130:13799-13818 | Msa1450870:intron | 35.0% | |
GGTTACATTTATCAGGGAAA+TGG | - | tig0033130:13836-13855 | Msa1450870:intron | 35.0% | |
ACATTTATCAGGGAAATGGA+AGG | - | tig0033130:13840-13859 | Msa1450870:intron | 35.0% | |
CATTTATCAGGGAAATGGAA+GGG | - | tig0033130:13841-13860 | Msa1450870:intron | 35.0% | |
AAGCCATCAACATAGTATTG+AGG | + | tig0033130:14354-14373 | None:intergenic | 35.0% | |
AATTTGTCGAGTGAGGTTAT+CGG | + | tig0033130:14452-14471 | None:intergenic | 35.0% | |
CAAGCAAAACTCAATAGAGA+TGG | + | tig0033130:14506-14525 | None:intergenic | 35.0% | |
! | ACTCCCCTTACAATGTATTT+TGG | - | tig0033130:14668-14687 | Msa1450870:intron | 35.0% |
! | CTCCCCTTACAATGTATTTT+GGG | - | tig0033130:14669-14688 | Msa1450870:intron | 35.0% |
CAACAATTGTCCCAATTACT+TGG | + | tig0033130:14721-14740 | None:intergenic | 35.0% | |
CAATTAGAAAGAGTTACCTG+AGG | + | tig0033130:14972-14991 | None:intergenic | 35.0% | |
TAGGATTAAAAACCGATCCT+AGG | - | tig0033130:15270-15289 | Msa1450870:intron | 35.0% | |
CTTAGTTTATCTCCTAGGAT+CGG | + | tig0033130:15285-15304 | None:intergenic | 35.0% | |
! | TTTTTCTTCTCCACTGTTGT+AGG | - | tig0033130:15372-15391 | Msa1450870:intron | 35.0% |
CAGTGATAGGAAAGAAATGT+TGG | - | tig0033130:15427-15446 | Msa1450870:intron | 35.0% | |
! | AATAATCCCAAAGCTGTTTC+GGG | + | tig0033130:15558-15577 | None:intergenic | 35.0% |
TTGGGATTATTTCCTGATGT+AGG | - | tig0033130:15567-15586 | Msa1450870:intron | 35.0% | |
!!! | TCTAGACTAGCTGGATTTTT+TGG | - | tig0033130:15606-15625 | Msa1450870:intron | 35.0% |
GCCAAAAACGATGAAAAGAT+TGG | + | tig0033130:15704-15723 | None:intergenic | 35.0% | |
GTGTGTGTGTGTTTGTAAAT+TGG | + | tig0033130:15786-15805 | None:intergenic | 35.0% | |
TATATTCTGTGTGTGCACAT+GGG | + | tig0033130:15818-15837 | None:intergenic | 35.0% | |
TTTACTTTCTCTTGCATGGT+TGG | - | tig0033130:15887-15906 | Msa1450870:intron | 35.0% | |
GAAAGAAAAAATAGGAGACG+GGG | + | tig0033130:16012-16031 | None:intergenic | 35.0% | |
GGAAAGAAAAAATAGGAGAC+GGG | + | tig0033130:16013-16032 | None:intergenic | 35.0% | |
!! | CCTGCAATTTGTTTTCCAAA+AGG | + | tig0033130:16034-16053 | None:intergenic | 35.0% |
!! | CCTTTTGGAAAACAAATTGC+AGG | - | tig0033130:16031-16050 | Msa1450870:intron | 35.0% |
CAAATTGCAGGAGAATATGT+TGG | - | tig0033130:16043-16062 | Msa1450870:intron | 35.0% | |
! | AACACATTTTGTCCCTTCAT+CGG | - | tig0033130:16117-16136 | Msa1450870:intron | 35.0% |
!! | TTTCTGCTGATTTGCATCTT+TGG | - | tig0033130:16170-16189 | Msa1450870:intron | 35.0% |
! | GAAGTACCATTGTTAACCAA+TGG | - | tig0033130:16259-16278 | Msa1450870:intron | 35.0% |
!!! | ACTGTATGCATTTTTAGCCA+TGG | - | tig0033130:16428-16447 | Msa1450870:intron | 35.0% |
!! | GTGAATTTTAATAGACCAGG+GGG | + | tig0033130:16512-16531 | None:intergenic | 35.0% |
!! | GGTGTGAATTTTAATAGACC+AGG | + | tig0033130:16515-16534 | None:intergenic | 35.0% |
!! | TTCATGGTCAGTTTTTAAGG+GGG | + | tig0033130:16566-16585 | None:intergenic | 35.0% |
!! | GTTCATGGTCAGTTTTTAAG+GGG | + | tig0033130:16567-16586 | None:intergenic | 35.0% |
! | GGTTCATGGTCAGTTTTTAA+GGG | + | tig0033130:16568-16587 | None:intergenic | 35.0% |
TTATATAATCAGGGGGTTCA+TGG | + | tig0033130:16582-16601 | None:intergenic | 35.0% | |
AAAAGATACAAGTTCAGTGC+TGG | + | tig0033130:16634-16653 | None:intergenic | 35.0% | |
!! | TGTATGTTTGGTTCCACTTT+TGG | - | tig0033130:16873-16892 | Msa1450870:intron | 35.0% |
ATCCCAAAAATGAAGCCATT+GGG | - | tig0033130:17234-17253 | Msa1450870:intron | 35.0% | |
CCATGATCATCACTTTATCT+TGG | + | tig0033130:17280-17299 | None:intergenic | 35.0% | |
CCAAGATAAAGTGATGATCA+TGG | - | tig0033130:17277-17296 | Msa1450870:intron | 35.0% | |
! | GCTTGAAAAAGGTTTAAGGT+TGG | + | tig0033130:17523-17542 | None:intergenic | 35.0% |
CCTAGCTTGAAAAAGGTTTA+AGG | + | tig0033130:17527-17546 | None:intergenic | 35.0% | |
!!! | CCTTAAACCTTTTTCAAGCT+AGG | - | tig0033130:17524-17543 | Msa1450870:intron | 35.0% |
CTATGTACCTAGCTTGAAAA+AGG | + | tig0033130:17534-17553 | None:intergenic | 35.0% | |
TTCTGTGCATACATTGCAAA+AGG | + | tig0033130:17751-17770 | None:intergenic | 35.0% | |
TGCACAGAAATTATCGTCAT+TGG | - | tig0033130:17762-17781 | Msa1450870:intron | 35.0% | |
ATAATTGCAGATACTATGGC+TGG | + | tig0033130:17820-17839 | None:intergenic | 35.0% | |
AACAGGATAGTGTTTATCAC+AGG | - | tig0033130:17869-17888 | Msa1450870:intron | 35.0% | |
TTATTGTGATTGCTCATTGC+AGG | - | tig0033130:18133-18152 | Msa1450870:intron | 35.0% | |
CTATGAGTAAAGCAGATAGT+TGG | - | tig0033130:18341-18360 | Msa1450870:intron | 35.0% | |
AATAAGCGAACAAACCTATG+TGG | + | tig0033130:18513-18532 | None:intergenic | 35.0% | |
TTAATGGCTTAAGAGGCAAA+TGG | + | tig0033130:18569-18588 | None:intergenic | 35.0% | |
AATGGTTATGTCCTACTTCA+GGG | - | tig0033130:18885-18904 | Msa1450870:intron | 35.0% | |
AGATAAAGACAGGAAACCAA+AGG | - | tig0033130:18926-18945 | Msa1450870:intron | 35.0% | |
TTAACAAGCTCCAATTTGGA+AGG | + | tig0033130:19049-19068 | None:intergenic | 35.0% | |
!! | TTCCAAATTGGAGCTTGTTA+AGG | - | tig0033130:19048-19067 | Msa1450870:intron | 35.0% |
ATCCTTAACAAGCTCCAATT+TGG | + | tig0033130:19053-19072 | None:intergenic | 35.0% | |
ATCAACAATCTCATCAGTTG+AGG | - | tig0033130:19184-19203 | Msa1450870:intron | 35.0% | |
GTGGATGTTAATTTCACCAA+AGG | + | tig0033130:19474-19493 | None:intergenic | 35.0% | |
GAAATTAACATCCACTGATG+TGG | - | tig0033130:19479-19498 | Msa1450870:five_prime_UTR | 35.0% | |
AACCTGATCTTCATCCAGTT+TGG | + | tig0033130:11588-11607 | None:intergenic | 40.0% | |
TTGGTATTGTGCAAAGGTTC+TGG | - | tig0033130:11724-11743 | Msa1450870:exon | 40.0% | |
!! | CGAGAGTTTTGACATTGAAC+AGG | - | tig0033130:11765-11784 | Msa1450870:CDS | 40.0% |
CACGTTAGAATCAGTTCTAC+AGG | + | tig0033130:11981-12000 | None:intergenic | 40.0% | |
TGCATAACCAAACACACGTA+CGG | - | tig0033130:12417-12436 | Msa1450870:intron | 40.0% | |
ACATCCTGTCAAACTACGAT+TGG | + | tig0033130:12504-12523 | None:intergenic | 40.0% | |
!! | CCATTTTGGAAGCTACACAT+GGG | + | tig0033130:12592-12611 | None:intergenic | 40.0% |
AACCACATGAAGATGTGTTG+GGG | - | tig0033130:12688-12707 | Msa1450870:intron | 40.0% | |
!! | GATGTGTTGGGGCTTATTTT+TGG | - | tig0033130:12699-12718 | Msa1450870:intron | 40.0% |
! | ATTAAAGGCTAAGAGGGTAC+AGG | + | tig0033130:12735-12754 | None:intergenic | 40.0% |
TTCGACAGAGTTCAAGAGAA+TGG | - | tig0033130:12866-12885 | Msa1450870:intron | 40.0% | |
TTTGGCAGTGAAATGAGAAG+AGG | + | tig0033130:12892-12911 | None:intergenic | 40.0% | |
CAGGTAAATGGAAGAGGTTA+GGG | + | tig0033130:13067-13086 | None:intergenic | 40.0% | |
ACAGGTAAATGGAAGAGGTT+AGG | + | tig0033130:13068-13087 | None:intergenic | 40.0% | |
TTCTCCTGTCTTCCTGTTAT+AGG | - | tig0033130:13167-13186 | Msa1450870:intron | 40.0% | |
GATACCTATAACAGGAAGAC+AGG | + | tig0033130:13174-13193 | None:intergenic | 40.0% | |
GGATGTGAAAATGTGCACTT+TGG | + | tig0033130:13765-13784 | None:intergenic | 40.0% | |
GATGAGAAGACATGTTGCAA+AGG | + | tig0033130:13786-13805 | None:intergenic | 40.0% | |
AGTGATGGTTACAATAGCTC+GGG | + | tig0033130:14063-14082 | None:intergenic | 40.0% | |
GAGTGATGGTTACAATAGCT+CGG | + | tig0033130:14064-14083 | None:intergenic | 40.0% | |
!! | TAGGGGTTATGTTTTAGGCA+AGG | - | tig0033130:14135-14154 | Msa1450870:intron | 40.0% |
TGGTATGTGTGCTCTTGATA+TGG | - | tig0033130:14250-14269 | Msa1450870:intron | 40.0% | |
ATTGAGGTTATCCACAACAG+AGG | + | tig0033130:14338-14357 | None:intergenic | 40.0% | |
TATCAGAGTAATGTGCCTTG+TGG | - | tig0033130:14528-14547 | Msa1450870:intron | 40.0% | |
TAAATTTAGCAGTACCCTCC+AGG | - | tig0033130:14693-14712 | Msa1450870:intron | 40.0% | |
GCTGCTTCTAAACTCCTTAT+GGG | - | tig0033130:14785-14804 | Msa1450870:CDS | 40.0% | |
GGTATAGGTGATTGGAGATT+TGG | - | tig0033130:14888-14907 | Msa1450870:intron | 40.0% | |
GGCATCTTAGTTTATCTCCT+AGG | + | tig0033130:15290-15309 | None:intergenic | 40.0% | |
GGATGCTAAATAGATAGGGA+AGG | + | tig0033130:15473-15492 | None:intergenic | 40.0% | |
GCATAGCAAATACCTGCAAA+TGG | + | tig0033130:15536-15555 | None:intergenic | 40.0% | |
! | TGTCTCCTGCATACTTTTGT+TGG | - | tig0033130:15730-15749 | Msa1450870:intron | 40.0% |
! | AGCAACCAACAAAAGTATGC+AGG | + | tig0033130:15738-15757 | None:intergenic | 40.0% |
ATATTCTGTGTGTGCACATG+GGG | + | tig0033130:15817-15836 | None:intergenic | 40.0% | |
GTATATTCTGTGTGTGCACA+TGG | + | tig0033130:15819-15838 | None:intergenic | 40.0% | |
TGCACACACAGAATATACCT+GGG | - | tig0033130:15821-15840 | Msa1450870:CDS | 40.0% | |
!! | GGAGAATATGTTGGTCTTAC+AGG | - | tig0033130:16052-16071 | Msa1450870:intron | 40.0% |
GTATGTAGCATACCGATGAA+GGG | + | tig0033130:16132-16151 | None:intergenic | 40.0% | |
AGTATGTAGCATACCGATGA+AGG | + | tig0033130:16133-16152 | None:intergenic | 40.0% | |
TACACTTCTTATGACTCGAC+TGG | + | tig0033130:16212-16231 | None:intergenic | 40.0% | |
!! | TCAGTTTTTAAGGGGGTTCA+TGG | + | tig0033130:16559-16578 | None:intergenic | 40.0% |
! | GGGTTCATGGTCAGTTTTTA+AGG | + | tig0033130:16569-16588 | None:intergenic | 40.0% |
ATATTGTGTGGTTGCAGTAG+TGG | + | tig0033130:16680-16699 | None:intergenic | 40.0% | |
ATAGCACTGCACATATTGTG+TGG | + | tig0033130:16692-16711 | None:intergenic | 40.0% | |
AAGGGTCAGAATGTGGTTAT+AGG | + | tig0033130:16724-16743 | None:intergenic | 40.0% | |
!! | TGTTTGGTTCCACTTTTGGA+AGG | - | tig0033130:16877-16896 | Msa1450870:intron | 40.0% |
TAAGTGTGTGTTTGGTTGTG+CGG | + | tig0033130:17137-17156 | None:intergenic | 40.0% | |
GATCCCAAAAATGAAGCCAT+TGG | - | tig0033130:17233-17252 | Msa1450870:intron | 40.0% | |
TCCCAAAAATGAAGCCATTG+GGG | - | tig0033130:17235-17254 | Msa1450870:intron | 40.0% | |
!! | TCCCCAATGGCTTCATTTTT+GGG | + | tig0033130:17239-17258 | None:intergenic | 40.0% |
! | TTCCCCAATGGCTTCATTTT+TGG | + | tig0033130:17240-17259 | None:intergenic | 40.0% |
! | AAGGTTTAAGGTTGGATCAG+TGG | + | tig0033130:17515-17534 | None:intergenic | 40.0% |
AGTTTCAATGGATCTTCCTG+TGG | - | tig0033130:17608-17627 | Msa1450870:intron | 40.0% | |
CCTGTGGAACTTTATTACGT+CGG | - | tig0033130:17624-17643 | Msa1450870:intron | 40.0% | |
CTGTGGAACTTTATTACGTC+GGG | - | tig0033130:17625-17644 | Msa1450870:intron | 40.0% | |
GGAAGAATCATTATGCAAGG+TGG | - | tig0033130:17783-17802 | Msa1450870:intron | 40.0% | |
!!! | ACACTATCCTGTTTTAGGGA+AGG | + | tig0033130:17862-17881 | None:intergenic | 40.0% |
GGATAGTGTTTATCACAGGT+TGG | - | tig0033130:17873-17892 | Msa1450870:intron | 40.0% | |
ATTTGACAGACGGTTATCCT+AGG | + | tig0033130:17957-17976 | None:intergenic | 40.0% | |
! | TCTGTACGTTTCTGAGAACT+TGG | - | tig0033130:18018-18037 | Msa1450870:intron | 40.0% |
!! | CATATCACATTGGCTTAGTC+AGG | - | tig0033130:18088-18107 | Msa1450870:intron | 40.0% |
! | GTGTTTCTCTAGGAAAACAG+TGG | - | tig0033130:18173-18192 | Msa1450870:intron | 40.0% |
!! | GTCAGTTTTAACGACCACAT+AGG | - | tig0033130:18496-18515 | Msa1450870:intron | 40.0% |
CTGCCTTGTCTAATCTGAAA+AGG | + | tig0033130:18716-18735 | None:intergenic | 40.0% | |
! | CTTTTCAGATTAGACAAGGC+AGG | - | tig0033130:18714-18733 | Msa1450870:intron | 40.0% |
CAATGGTTATGTCCTACTTC+AGG | - | tig0033130:18884-18903 | Msa1450870:intron | 40.0% | |
TAAAGACAGGAAACCAAAGG+TGG | - | tig0033130:18929-18948 | Msa1450870:intron | 40.0% | |
AAAGACAGGAAACCAAAGGT+GGG | - | tig0033130:18930-18949 | Msa1450870:intron | 40.0% | |
TAGTTATGGTTTCCCACCTT+TGG | + | tig0033130:18945-18964 | None:intergenic | 40.0% | |
TGGAAGGATCCCACTAATAA+AGG | + | tig0033130:19033-19052 | None:intergenic | 40.0% | |
TTAGTGGGATCCTTCCAAAT+TGG | - | tig0033130:19036-19055 | Msa1450870:intron | 40.0% | |
TTCTCTAAGCTTGATGCTGA+AGG | - | tig0033130:19091-19110 | Msa1450870:intron | 40.0% | |
TGCTGAAGGATGGAAAGATT+TGG | - | tig0033130:19105-19124 | Msa1450870:CDS | 40.0% | |
!! | AGCTTTGAAATAGCATGTGG+AGG | + | tig0033130:19157-19176 | None:intergenic | 40.0% |
! | GTTCCATTCGTGTTTTCCTT+TGG | - | tig0033130:19455-19474 | Msa1450870:five_prime_UTR | 40.0% |
TCACCAAAGGAAAACACGAA+TGG | + | tig0033130:19461-19480 | None:intergenic | 40.0% | |
! | ATAGCAGCACCCATCCATTT+TGG | - | tig0033130:11516-11535 | Msa1450870:three_prime_UTR | 45.0% |
! | TAGCAGCACCCATCCATTTT+GGG | - | tig0033130:11517-11536 | Msa1450870:three_prime_UTR | 45.0% |
AGGAAGGACCCAAAATGGAT+GGG | + | tig0033130:11528-11547 | None:intergenic | 45.0% | |
TGATCTTCATCCAGTTTGGC+GGG | + | tig0033130:11584-11603 | None:intergenic | 45.0% | |
CTGATCTTCATCCAGTTTGG+CGG | + | tig0033130:11585-11604 | None:intergenic | 45.0% | |
! | GTATTGTGCAAAGGTTCTGG+TGG | - | tig0033130:11727-11746 | Msa1450870:exon | 45.0% |
GGTGTATACTTGGTTGTCTC+TGG | - | tig0033130:12047-12066 | Msa1450870:intron | 45.0% | |
GCATAACCAAACACACGTAC+GGG | - | tig0033130:12418-12437 | Msa1450870:intron | 45.0% | |
AATGTTCCCGTACGTGTGTT+TGG | + | tig0033130:12427-12446 | None:intergenic | 45.0% | |
! | AGCTTTCGTGTTTGGTTCCA+TGG | - | tig0033130:12448-12467 | Msa1450870:intron | 45.0% |
! | TTCGTGTTTGGTTCCATGGT+TGG | - | tig0033130:12452-12471 | Msa1450870:intron | 45.0% |
! | TGTTTGGTTCCATGGTTGGA+GGG | - | tig0033130:12456-12475 | Msa1450870:intron | 45.0% |
GCTCAAACTTGAGTTTGCCA+TGG | - | tig0033130:12478-12497 | Msa1450870:intron | 45.0% | |
! | TGTCAAACTACGATTGGCCA+TGG | + | tig0033130:12498-12517 | None:intergenic | 45.0% |
ATGGCCAATCGTAGTTTGAC+AGG | - | tig0033130:12497-12516 | Msa1450870:CDS | 45.0% | |
CCCATGTGTAGCTTCCAAAA+TGG | - | tig0033130:12589-12608 | Msa1450870:intron | 45.0% | |
!! | GCCATTTTGGAAGCTACACA+TGG | + | tig0033130:12593-12612 | None:intergenic | 45.0% |
GTGTAGCTTCCAAAATGGCT+TGG | - | tig0033130:12594-12613 | Msa1450870:intron | 45.0% | |
ATGCACTCTTCAGTGGCATT+TGG | + | tig0033130:12910-12929 | None:intergenic | 45.0% | |
!! | GTTAGGGTCAGTTTGGTTTG+TGG | + | tig0033130:13051-13070 | None:intergenic | 45.0% |
!!! | AATGGAAGGGCATTTTGTGC+TGG | - | tig0033130:13854-13873 | Msa1450870:intron | 45.0% |
TCAGAGGGTGACAAATGGTT+TGG | + | tig0033130:14412-14431 | None:intergenic | 45.0% | |
GTTATCGGATGAAGTCATGG+CGG | + | tig0033130:14437-14456 | None:intergenic | 45.0% | |
GAGGTTATCGGATGAAGTCA+TGG | + | tig0033130:14440-14459 | None:intergenic | 45.0% | |
ACTCAATAGAGATGGACCTG+TGG | + | tig0033130:14498-14517 | None:intergenic | 45.0% | |
TAGCAAGGTGAATAGAGGCA+AGG | + | tig0033130:14571-14590 | None:intergenic | 45.0% | |
ATCGCTAGCAAGGTGAATAG+AGG | + | tig0033130:14576-14595 | None:intergenic | 45.0% | |
CGCTGCTTCTAAACTCCTTA+TGG | - | tig0033130:14784-14803 | Msa1450870:CDS | 45.0% | |
GCTTCTAAACTCCTTATGGG+AGG | - | tig0033130:14788-14807 | Msa1450870:CDS | 45.0% | |
CTTAATGGAATCGTCATGGG+AGG | - | tig0033130:15084-15103 | Msa1450870:intron | 45.0% | |
TGTACTTGTGGACCATTTGC+AGG | - | tig0033130:15521-15540 | Msa1450870:intron | 45.0% | |
! | TAATATGAGGCGCCTACATC+AGG | + | tig0033130:15582-15601 | None:intergenic | 45.0% |
TATTCTGTGTGTGCACATGG+GGG | + | tig0033130:15816-15835 | None:intergenic | 45.0% | |
GTGCACACACAGAATATACC+TGG | - | tig0033130:15820-15839 | Msa1450870:CDS | 45.0% | |
GCACACACAGAATATACCTG+GGG | - | tig0033130:15822-15841 | Msa1450870:CDS | 45.0% | |
CACACACAGAATATACCTGG+GGG | - | tig0033130:15823-15842 | Msa1450870:CDS | 45.0% | |
!! | ATGTTGGTCTTACAGGTGCT+AGG | - | tig0033130:16059-16078 | Msa1450870:intron | 45.0% |
TCTTATGACTCGACTGGAGT+TGG | + | tig0033130:16206-16225 | None:intergenic | 45.0% | |
!! | TAACCAATGGTTTTCAGGCG+TGG | - | tig0033130:16272-16291 | Msa1450870:intron | 45.0% |
ATTCCACGCCTGAAAACCAT+TGG | + | tig0033130:16278-16297 | None:intergenic | 45.0% | |
GGATACAGCTTGAATCTCCA+TGG | + | tig0033130:16448-16467 | None:intergenic | 45.0% | |
TTCAAGCTGTATCCAACCCA+TGG | - | tig0033130:16454-16473 | Msa1450870:intron | 45.0% | |
TCAAGCTGTATCCAACCCAT+GGG | - | tig0033130:16455-16474 | Msa1450870:intron | 45.0% | |
CCGACGTAATAAAGTTCCAC+AGG | + | tig0033130:17627-17646 | None:intergenic | 45.0% | |
GTTAAATTCCCTTGGGTCCT+AGG | - | tig0033130:17937-17956 | Msa1450870:intron | 45.0% | |
TGTGATTGCTCATTGCAGGA+TGG | - | tig0033130:18137-18156 | Msa1450870:intron | 45.0% | |
TGTCGGAGATGCTTTCTTCA+AGG | + | tig0033130:18386-18405 | None:intergenic | 45.0% | |
ATTAGACAAGGCAGGCTCTT+AGG | - | tig0033130:18722-18741 | Msa1450870:intron | 45.0% | |
CCTCGAAGAAATCCTTGCTA+TGG | + | tig0033130:18805-18824 | None:intergenic | 45.0% | |
CCATAGCAAGGATTTCTTCG+AGG | - | tig0033130:18802-18821 | Msa1450870:intron | 45.0% | |
! | TAGCTCTACAACCCTGAAGT+AGG | + | tig0033130:18899-18918 | None:intergenic | 45.0% |
CTAAGCTTGATGCTGAAGGA+TGG | - | tig0033130:19095-19114 | Msa1450870:intron | 45.0% | |
! | AAGATTTGGAGTTCCCCAAG+AGG | - | tig0033130:19119-19138 | Msa1450870:CDS | 45.0% |
GCAAGTTGTTGAACCTCTTG+GGG | + | tig0033130:19135-19154 | None:intergenic | 45.0% | |
GGCAAGTTGTTGAACCTCTT+GGG | + | tig0033130:19136-19155 | None:intergenic | 45.0% | |
AGGCAAGTTGTTGAACCTCT+TGG | + | tig0033130:19137-19156 | None:intergenic | 45.0% | |
!! | TATTAAAATTAAAATATTAC+TGG | + | tig0033130:11499-11518 | None:intergenic | 5.0% |
!! | ATATTATTTAGTTATTATAA+AGG | + | tig0033130:15216-15235 | None:intergenic | 5.0% |
GAGGAAGGACCCAAAATGGA+TGG | + | tig0033130:11529-11548 | None:intergenic | 50.0% | |
GGAAGAGGAAGGACCCAAAA+TGG | + | tig0033130:11533-11552 | None:intergenic | 50.0% | |
TTTGGGTCCTTCCTCTTCCT+CGG | - | tig0033130:11534-11553 | Msa1450870:three_prime_UTR | 50.0% | |
ATCTTCATCCAGTTTGGCGG+GGG | + | tig0033130:11582-11601 | None:intergenic | 50.0% | |
GATCTTCATCCAGTTTGGCG+GGG | + | tig0033130:11583-11602 | None:intergenic | 50.0% | |
CGCCAAACTGGATGAAGATC+AGG | - | tig0033130:11583-11602 | Msa1450870:three_prime_UTR | 50.0% | |
! | GTGTTTGGTTCCATGGTTGG+AGG | - | tig0033130:12455-12474 | Msa1450870:intron | 50.0% |
AAGTTTGAGCCCTCCAACCA+TGG | + | tig0033130:12468-12487 | None:intergenic | 50.0% | |
AGCCCCAACACATCTTCATG+TGG | + | tig0033130:12693-12712 | None:intergenic | 50.0% | |
GGAAGAGGTTAGGGTCAGTT+TGG | + | tig0033130:13058-13077 | None:intergenic | 50.0% | |
AGGTGTAAATCAGTCCCTCG+GGG | + | tig0033130:13480-13499 | None:intergenic | 50.0% | |
CAGGTGTAAATCAGTCCCTC+GGG | + | tig0033130:13481-13500 | None:intergenic | 50.0% | |
GCAGGTGTAAATCAGTCCCT+CGG | + | tig0033130:13482-13501 | None:intergenic | 50.0% | |
GCTGTTGCTAATGACGCAAG+AGG | - | tig0033130:13890-13909 | Msa1450870:intron | 50.0% | |
GTTGCTAATGACGCAAGAGG+AGG | - | tig0033130:13893-13912 | Msa1450870:intron | 50.0% | |
CAATAGAGATGGACCTGTGG+TGG | + | tig0033130:14495-14514 | None:intergenic | 50.0% | |
TGCCTTGTGGTAGCATGTGA+AGG | - | tig0033130:14541-14560 | Msa1450870:intron | 50.0% | |
TGCCTTCACATGCTACCACA+AGG | + | tig0033130:14546-14565 | None:intergenic | 50.0% | |
AGTCACCAGGGTAGACAGAT+GGG | + | tig0033130:14599-14618 | None:intergenic | 50.0% | |
AAGTCACCAGGGTAGACAGA+TGG | + | tig0033130:14600-14619 | None:intergenic | 50.0% | |
! | TAACCTCGAGTTGCAGGCTT+GGG | + | tig0033130:14648-14667 | None:intergenic | 50.0% |
! | TTAACCTCGAGTTGCAGGCT+TGG | + | tig0033130:14649-14668 | None:intergenic | 50.0% |
CCAATTACTTGGAGCCTGGA+GGG | + | tig0033130:14710-14729 | None:intergenic | 50.0% | |
CCTCCAGGCTCCAAGTAATT+GGG | - | tig0033130:14708-14727 | Msa1450870:intron | 50.0% | |
TGTCCCAATTACTTGGAGCC+TGG | + | tig0033130:14714-14733 | None:intergenic | 50.0% | |
GGCAACATACAGTAAGCCTC+AGG | - | tig0033130:14953-14972 | Msa1450870:intron | 50.0% | |
AATGGAATCGTCATGGGAGG+TGG | - | tig0033130:15087-15106 | Msa1450870:intron | 50.0% | |
TGCTATGCCCGAAACAGCTT+TGG | - | tig0033130:15548-15567 | Msa1450870:intron | 50.0% | |
GCTATGCCCGAAACAGCTTT+GGG | - | tig0033130:15549-15568 | Msa1450870:intron | 50.0% | |
ACACAGAATATACCTGGGGG+TGG | - | tig0033130:15826-15845 | Msa1450870:intron | 50.0% | |
AGAATATACCTGGGGGTGGA+AGG | - | tig0033130:15830-15849 | Msa1450870:intron | 50.0% | |
GAATATACCTGGGGGTGGAA+GGG | - | tig0033130:15831-15850 | Msa1450870:intron | 50.0% | |
AATATACCTGGGGGTGGAAG+GGG | - | tig0033130:15832-15851 | Msa1450870:intron | 50.0% | |
! | TGGTCTTACAGGTGCTAGGT+TGG | - | tig0033130:16063-16082 | Msa1450870:intron | 50.0% |
! | CTTACAGGTGCTAGGTTGGA+TGG | - | tig0033130:16067-16086 | Msa1450870:intron | 50.0% |
GGTGCAGAAATGCTTGCTTG+TGG | - | tig0033130:16088-16107 | Msa1450870:intron | 50.0% | |
ACATATGTAGCTCCGCCCAT+GGG | + | tig0033130:16473-16492 | None:intergenic | 50.0% | |
!! | CAGTGCTGGCAGTGTTTGAT+TGG | + | tig0033130:16620-16639 | None:intergenic | 50.0% |
GTGAAGGAAGGGTCAGAATG+TGG | + | tig0033130:16731-16750 | None:intergenic | 50.0% | |
AGAGCAGCCTTCCCTAAAAC+AGG | - | tig0033130:17852-17871 | Msa1450870:intron | 50.0% | |
ACGGTTATCCTAGGACCCAA+GGG | + | tig0033130:17948-17967 | None:intergenic | 50.0% | |
CTGAGAACTTGGAGCATGTC+TGG | - | tig0033130:18029-18048 | Msa1450870:intron | 50.0% | |
! | CCTTGCTATGGTGTCCTTGT+AGG | + | tig0033130:18793-18812 | None:intergenic | 50.0% |
CCTACAAGGACACCATAGCA+AGG | - | tig0033130:18790-18809 | Msa1450870:intron | 50.0% | |
GTGAAGACCGAGGAAGAGGA+AGG | + | tig0033130:11544-11563 | None:intergenic | 55.0% | |
! | GTTGGTGAAGACCGAGGAAG+AGG | + | tig0033130:11548-11567 | None:intergenic | 55.0% |
! | ATGGTCGTTGGTGAAGACCG+AGG | + | tig0033130:11554-11573 | None:intergenic | 55.0% |
TCGGTCTTCACCAACGACCA+TGG | - | tig0033130:11553-11572 | Msa1450870:three_prime_UTR | 55.0% | |
!!! | GGAAGGGCATTTTGTGCTGG+TGG | - | tig0033130:13857-13876 | Msa1450870:intron | 55.0% |
CAGCTGGTGTAGGTTGCCTA+AGG | + | tig0033130:14304-14323 | None:intergenic | 55.0% | |
TAGGCAACCTACACCAGCTG+CGG | - | tig0033130:14304-14323 | Msa1450870:intron | 55.0% | |
CGGCTCAACTACCTCTGTTG+TGG | - | tig0033130:14324-14343 | Msa1450870:intron | 55.0% | |
CGGCATCAGAGGGTGACAAA+TGG | + | tig0033130:14417-14436 | None:intergenic | 55.0% | |
GAAGTCATGGCGGCATCAGA+GGG | + | tig0033130:14427-14446 | None:intergenic | 55.0% | |
TGAAGTCATGGCGGCATCAG+AGG | + | tig0033130:14428-14447 | None:intergenic | 55.0% | |
GGGTGGCAATTTGTCGAGTG+AGG | + | tig0033130:14459-14478 | None:intergenic | 55.0% | |
GTGGTGGTCGGTTGGATGAA+GGG | + | tig0033130:14479-14498 | None:intergenic | 55.0% | |
TGTGGTGGTCGGTTGGATGA+AGG | + | tig0033130:14480-14499 | None:intergenic | 55.0% | |
TTCATCCAACCGACCACCAC+AGG | - | tig0033130:14479-14498 | Msa1450870:intron | 55.0% | |
AGAGATGGACCTGTGGTGGT+CGG | + | tig0033130:14491-14510 | None:intergenic | 55.0% | |
GACAGATGGGATCGCTAGCA+AGG | + | tig0033130:14586-14605 | None:intergenic | 55.0% | |
TTTCCCAAGCCTGCAACTCG+AGG | - | tig0033130:14642-14661 | Msa1450870:intron | 55.0% | |
! | GGGAGTTAACCTCGAGTTGC+AGG | + | tig0033130:14654-14673 | None:intergenic | 55.0% |
CCCTCCAGGCTCCAAGTAAT+TGG | - | tig0033130:14707-14726 | Msa1450870:intron | 55.0% | |
CCCAATTACTTGGAGCCTGG+AGG | + | tig0033130:14711-14730 | None:intergenic | 55.0% | |
AGCTGTATCCAACCCATGGG+CGG | - | tig0033130:16458-16477 | Msa1450870:intron | 55.0% | |
CACATATGTAGCTCCGCCCA+TGG | + | tig0033130:16474-16493 | None:intergenic | 55.0% | |
GGCGGAGCTACATATGTGTG+AGG | - | tig0033130:16476-16495 | Msa1450870:intron | 55.0% | |
GACGGTTATCCTAGGACCCA+AGG | + | tig0033130:17949-17968 | None:intergenic | 55.0% | |
TACAGAGCTCACACTGTCCC+AGG | + | tig0033130:18004-18023 | None:intergenic | 55.0% | |
CAAGGCAGGCTCTTAGGTGT+TGG | - | tig0033130:18728-18747 | Msa1450870:intron | 55.0% | |
AGTTGAGCCGCAGCTGGTGT+AGG | + | tig0033130:14314-14333 | None:intergenic | 60.0% | |
AGAGGTAGTTGAGCCGCAGC+TGG | + | tig0033130:14320-14339 | None:intergenic | 60.0% | |
GTGGTCGGTTGGATGAAGGG+TGG | + | tig0033130:14476-14495 | None:intergenic | 60.0% | |
ATGGACCTGTGGTGGTCGGT+TGG | + | tig0033130:14487-14506 | None:intergenic | 60.0% | |
GCGATCCCATCTGTCTACCC+TGG | - | tig0033130:14591-14610 | Msa1450870:intron | 60.0% | |
!! | GGCGCTGGTGCTTCTATGCA+TGG | - | tig0033130:15108-15127 | Msa1450870:intron | 60.0% |
ATGTAGCTCCGCCCATGGGT+TGG | + | tig0033130:16469-16488 | None:intergenic | 60.0% | |
TGAGGTTCAGCTGAACCCCC+TGG | - | tig0033130:16494-16513 | Msa1450870:intron | 60.0% | |
!! | TTGCCAGGACTCTGGAGCAG+GGG | + | tig0033130:17490-17509 | None:intergenic | 60.0% |
!! | GTTGCCAGGACTCTGGAGCA+GGG | + | tig0033130:17491-17510 | None:intergenic | 60.0% |
GTTGGATCAGTGGCGTTGCC+AGG | + | tig0033130:17505-17524 | None:intergenic | 60.0% | |
CAGTTTGGCGGGGGATGCCA+TGG | + | tig0033130:11573-11592 | None:intergenic | 65.0% | |
CATGGCATCCCCCGCCAAAC+TGG | - | tig0033130:11571-11590 | Msa1450870:three_prime_UTR | 65.0% | |
ATCGTCATGGGAGGTGGCGC+TGG | - | tig0033130:15093-15112 | Msa1450870:intron | 65.0% | |
ACCTGGGGGTGGAAGGGGAT+TGG | - | tig0033130:15837-15856 | Msa1450870:intron | 65.0% | |
AACCCCCTGCTCCAGAGTCC+TGG | - | tig0033130:17484-17503 | Msa1450870:intron | 65.0% | |
!! | TGCCAGGACTCTGGAGCAGG+GGG | + | tig0033130:17489-17508 | None:intergenic | 65.0% |
!! | CGTTGCCAGGACTCTGGAGC+AGG | + | tig0033130:17492-17511 | None:intergenic | 65.0% |
CAGTGGCGTTGCCAGGACTC+TGG | + | tig0033130:17498-17517 | None:intergenic | 65.0% | |
GCGGGGGATGCCATGGTCGT+TGG | + | tig0033130:11566-11585 | None:intergenic | 70.0% | |
GCCAATCCCCTTCCACCCCC+AGG | + | tig0033130:15841-15860 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0033130 | gene | 11412 | 19507 | 11412 | ID=Msa1450870;Name=Msa1450870 |
tig0033130 | mRNA | 11412 | 19507 | 11412 | ID=Msa1450870-mRNA-1;Parent=Msa1450870;Name=Msa1450870-mRNA-1;_AED=0.06;_eAED=0.06;_QI=160|1|1|1|1|1|14|327|382 |
tig0033130 | exon | 11412 | 11879 | 11412 | ID=Msa1450870-mRNA-1:exon:17718;Parent=Msa1450870-mRNA-1 |
tig0033130 | exon | 11972 | 12013 | 11972 | ID=Msa1450870-mRNA-1:exon:17717;Parent=Msa1450870-mRNA-1 |
tig0033130 | exon | 12096 | 12197 | 12096 | ID=Msa1450870-mRNA-1:exon:17716;Parent=Msa1450870-mRNA-1 |
tig0033130 | exon | 12490 | 12588 | 12490 | ID=Msa1450870-mRNA-1:exon:17715;Parent=Msa1450870-mRNA-1 |
tig0033130 | exon | 12704 | 12764 | 12704 | ID=Msa1450870-mRNA-1:exon:17714;Parent=Msa1450870-mRNA-1 |
tig0033130 | exon | 13029 | 13150 | 13029 | ID=Msa1450870-mRNA-1:exon:17713;Parent=Msa1450870-mRNA-1 |
tig0033130 | exon | 14781 | 14866 | 14781 | ID=Msa1450870-mRNA-1:exon:17712;Parent=Msa1450870-mRNA-1 |
tig0033130 | exon | 15292 | 15376 | 15292 | ID=Msa1450870-mRNA-1:exon:17711;Parent=Msa1450870-mRNA-1 |
tig0033130 | exon | 15761 | 15844 | 15761 | ID=Msa1450870-mRNA-1:exon:17710;Parent=Msa1450870-mRNA-1 |
tig0033130 | exon | 15945 | 16024 | 15945 | ID=Msa1450870-mRNA-1:exon:17709;Parent=Msa1450870-mRNA-1 |
tig0033130 | exon | 17005 | 17068 | 17005 | ID=Msa1450870-mRNA-1:exon:17708;Parent=Msa1450870-mRNA-1 |
tig0033130 | exon | 17662 | 17730 | 17662 | ID=Msa1450870-mRNA-1:exon:17707;Parent=Msa1450870-mRNA-1 |
tig0033130 | exon | 19099 | 19179 | 19099 | ID=Msa1450870-mRNA-1:exon:17706;Parent=Msa1450870-mRNA-1 |
tig0033130 | exon | 19315 | 19507 | 19315 | ID=Msa1450870-mRNA-1:exon:17705;Parent=Msa1450870-mRNA-1 |
tig0033130 | five_prime_UTR | 19348 | 19507 | 19348 | ID=Msa1450870-mRNA-1:five_prime_utr;Parent=Msa1450870-mRNA-1 |
tig0033130 | CDS | 19315 | 19347 | 19315 | ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1 |
tig0033130 | CDS | 19099 | 19179 | 19099 | ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1 |
tig0033130 | CDS | 17662 | 17730 | 17662 | ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1 |
tig0033130 | CDS | 17005 | 17068 | 17005 | ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1 |
tig0033130 | CDS | 15945 | 16024 | 15945 | ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1 |
tig0033130 | CDS | 15761 | 15844 | 15761 | ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1 |
tig0033130 | CDS | 15292 | 15376 | 15292 | ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1 |
tig0033130 | CDS | 14781 | 14866 | 14781 | ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1 |
tig0033130 | CDS | 13029 | 13150 | 13029 | ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1 |
tig0033130 | CDS | 12704 | 12764 | 12704 | ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1 |
tig0033130 | CDS | 12490 | 12588 | 12490 | ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1 |
tig0033130 | CDS | 12096 | 12197 | 12096 | ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1 |
tig0033130 | CDS | 11972 | 12013 | 11972 | ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1 |
tig0033130 | CDS | 11739 | 11879 | 11739 | ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1 |
tig0033130 | three_prime_UTR | 11412 | 11738 | 11412 | ID=Msa1450870-mRNA-1:three_prime_utr;Parent=Msa1450870-mRNA-1 |
Gene Sequence |
Protein sequence |