AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1450870


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1450870 MtrunA17_Chr8g0337981 98.429 382 6 0 1 382 1 382 0.0 782
Msa1450870 MtrunA17_Chr8g0334701 46.154 364 195 1 7 370 33 395 8.77e-113 335
Msa1450870 MtrunA17_Chr1g0150221 46.398 347 186 0 9 355 42 388 2.45e-110 329
Msa1450870 MtrunA17_Chr3g0095921 43.514 370 204 3 1 369 1 366 1.97e-100 303
Msa1450870 MtrunA17_Chr8g0390721 36.034 358 207 10 22 360 58 412 3.21e-59 197
Msa1450870 MtrunA17_Chr3g0122861 31.461 178 114 3 17 188 16 191 1.51e-14 73.2
Msa1450870 MtrunA17_Chr4g0068451 29.947 187 122 4 12 196 7 186 6.33e-14 71.2
Msa1450870 MtrunA17_Chr4g0055741 25.698 179 125 4 23 198 57 230 1.39e-12 67.8
Msa1450870 MtrunA17_Chr8g0365881 28.671 143 96 3 23 163 81 219 4.43e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1450870 AT5G65940.1 66.845 374 121 2 9 382 8 378 0.0 541
Msa1450870 AT5G65940.4 66.845 374 121 2 9 382 8 378 0.0 541
Msa1450870 AT5G65940.3 69.512 328 100 0 9 336 8 335 1.52e-179 502
Msa1450870 AT2G30660.1 66.474 346 116 0 9 354 4 349 4.41e-179 503
Msa1450870 AT2G30650.1 64.690 371 129 2 11 380 6 375 9.59e-179 502
Msa1450870 AT5G65940.2 68.012 322 103 0 8 329 7 328 2.97e-170 478
Msa1450870 AT2G30660.2 65.615 317 109 0 38 354 1 317 1.20e-161 457
Msa1450870 AT2G30650.2 64.127 315 113 0 8 322 3 317 1.37e-149 426
Msa1450870 AT4G31810.1 45.245 347 190 0 9 355 40 386 3.70e-107 321
Msa1450870 AT3G60510.1 47.383 363 190 1 11 373 38 399 8.97e-106 317
Msa1450870 AT3G60510.3 44.560 386 188 2 11 371 38 422 3.48e-100 304
Msa1450870 AT1G06550.1 43.052 367 206 2 7 373 8 371 4.60e-100 302
Msa1450870 AT3G60510.2 47.653 277 145 0 11 287 38 314 3.65e-80 249
Msa1450870 AT3G24360.2 36.212 359 201 12 22 360 58 408 1.81e-61 203
Msa1450870 AT4G13360.1 36.565 361 201 12 22 360 61 415 2.61e-61 203
Msa1450870 AT3G24360.1 35.833 360 205 12 22 360 58 412 2.53e-59 198
Msa1450870 AT3G24360.3 36.111 288 160 10 92 360 26 308 3.82e-48 166
Msa1450870 AT3G24360.6 36.111 288 160 10 92 360 5 287 4.03e-48 165
Msa1450870 AT3G24360.5 36.111 288 160 10 92 360 28 310 4.92e-48 166
Msa1450870 AT3G24360.4 38.224 259 150 9 22 271 58 315 5.25e-42 150
Msa1450870 AT4G16210.1 26.941 219 147 5 7 219 5 216 7.05e-14 71.6
Msa1450870 AT5G43280.2 27.624 181 120 4 18 188 18 197 1.61e-11 63.9
Msa1450870 AT5G43280.1 27.624 181 120 4 18 188 18 197 3.40e-11 63.9

Find 98 sgRNAs with CRISPR-Local

Find 512 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGCTATTTCAAAGCTTTA+AGG 0.111501 tig0033130:-11737 Msa1450870:exon
AACTTAATGTTGTGATTCTT+TGG 0.213448 tig0033130:+11676 None:intergenic
ATAGCAGCACCCATCCATTT+TGG 0.227060 tig0033130:-19381 Msa1450870:five_prime_UTR
ATCCTTAACAAGCTCCAATT+TGG 0.248004 tig0033130:+11847 None:intergenic
GAGAGAGCATTCAATTGTTT+TGG 0.250822 tig0033130:+19109 None:intergenic
TTGCAGGTTTCAATTCTTAA+TGG 0.257914 tig0033130:-15828 Msa1450870:intron
GGAGAATATGTTGGTCTTAC+AGG 0.259688 tig0033130:-14845 Msa1450870:CDS
TATTAAAATTAAAATATTAC+TGG 0.272905 tig0033130:+19401 None:intergenic
AACATTTATCAAATTCAATA+AGG 0.286065 tig0033130:+11462 None:intergenic
AAATAATCCCAAAGCTGTTT+CGG 0.303784 tig0033130:+15341 None:intergenic
GTCAATAATTGCAGATACTA+TGG 0.328804 tig0033130:+13076 None:intergenic
TGCTATGCCCGAAACAGCTT+TGG 0.328892 tig0033130:-15349 Msa1450870:CDS
AATAATCCCAAAGCTGTTTC+GGG 0.332057 tig0033130:+15342 None:intergenic
ATTAGACAAGGCAGGCTCTT+AGG 0.333895 tig0033130:-12175 Msa1450870:CDS
CCTTGCTATGGTGTCCTTGT+AGG 0.349526 tig0033130:+12107 None:intergenic
GGCAAGTTGTTGAACCTCTT+GGG 0.350616 tig0033130:+11764 None:intergenic
TTAGTGGGATCCTTCCAAAT+TGG 0.352371 tig0033130:-11861 Msa1450870:intron
ATATAAAATGAATTATTTGA+TGG 0.359065 tig0033130:-15965 Msa1450870:CDS
AACATTAAGTTGATTCTTGA+AGG 0.366901 tig0033130:-11664 Msa1450870:three_prime_UTR
TTTCATATGGTATAGGTGAT+TGG 0.369959 tig0033130:-16017 Msa1450870:intron
GGAAGAGGAAGGACCCAAAA+TGG 0.387237 tig0033130:+19367 None:intergenic
GGTATAGGTGATTGGAGATT+TGG 0.392868 tig0033130:-16009 Msa1450870:intron
TGTTAAATTGATTGTCCTAA+AGG 0.399260 tig0033130:-17661 Msa1450870:intron
TGCACAGAAATTATCGTCAT+TGG 0.403375 tig0033130:-13135 Msa1450870:intron
TTCCAAATTGGAGCTTGTTA+AGG 0.403393 tig0033130:-11849 Msa1450870:CDS
ATCGTCATGGGAGGTGGCGC+TGG 0.407520 tig0033130:-15804 Msa1450870:CDS
AACCTGATCTTCATCCAGTT+TGG 0.407756 tig0033130:+19312 None:intergenic
TGTCGGAGATGCTTTCTTCA+AGG 0.412605 tig0033130:+12514 None:intergenic
GGTTACATTTATCAGGGAAA+TGG 0.414501 tig0033130:-17061 Msa1450870:intron
TGCTGAAGGATGGAAAGATT+TGG 0.418826 tig0033130:-11792 Msa1450870:CDS
TAATATGAGGCGCCTACATC+AGG 0.422559 tig0033130:+15318 None:intergenic
TATTATTTGTCTAGACTAGC+TGG 0.430192 tig0033130:-15300 Msa1450870:CDS
AGGACAATCAATTTAACATC+AGG 0.430392 tig0033130:+17666 None:intergenic
GCTATGCCCGAAACAGCTTT+GGG 0.440444 tig0033130:-15348 Msa1450870:CDS
TTTGGGTCCTTCCTCTTCCT+CGG 0.454290 tig0033130:-19363 Msa1450870:five_prime_UTR
CGCCAAACTGGATGAAGATC+AGG 0.455421 tig0033130:-19314 Msa1450870:intron
AGGCAAGTTGTTGAACCTCT+TGG 0.459879 tig0033130:+11763 None:intergenic
AGAGCAGCCTTCCCTAAAAC+AGG 0.460836 tig0033130:-13045 Msa1450870:CDS
TGATCTTCATCCAGTTTGGC+GGG 0.473292 tig0033130:+19316 None:intergenic
ATCTTCATCCAGTTTGGCGG+GGG 0.486411 tig0033130:+19318 None:intergenic
TTATATAAGATCAACTTGTT+CGG 0.495881 tig0033130:+11615 None:intergenic
CCATAGCAAGGATTTCTTCG+AGG 0.511511 tig0033130:-12095 Msa1450870:intron
AGTATGTAGCATACCGATGA+AGG 0.512916 tig0033130:+14767 None:intergenic
CTTACAGGTGCTAGGTTGGA+TGG 0.513409 tig0033130:-14830 Msa1450870:CDS
TTCTCTAAGCTTGATGCTGA+AGG 0.514592 tig0033130:-11806 Msa1450870:CDS
CTGATCTTCATCCAGTTTGG+CGG 0.518696 tig0033130:+19315 None:intergenic
AATGGAATCGTCATGGGAGG+TGG 0.522285 tig0033130:-15810 Msa1450870:CDS
AATTCTTAATGGAATCGTCA+TGG 0.523281 tig0033130:-15817 Msa1450870:CDS
TTGGGATTATTTCCTGATGT+AGG 0.525045 tig0033130:-15330 Msa1450870:CDS
ATAATTGCAGATACTATGGC+TGG 0.526109 tig0033130:+13080 None:intergenic
GTTGGTGAAGACCGAGGAAG+AGG 0.528755 tig0033130:+19352 None:intergenic
GATCTTCATCCAGTTTGGCG+GGG 0.533241 tig0033130:+19317 None:intergenic
CTATGAGTAAAGCAGATAGT+TGG 0.533586 tig0033130:-12556 Msa1450870:CDS
ATTCTTAATGGAATCGTCAT+GGG 0.537888 tig0033130:-15816 Msa1450870:CDS
TAGTCTAGACAAATAATATG+AGG 0.540571 tig0033130:+15305 None:intergenic
GAGGAAGGACCCAAAATGGA+TGG 0.542392 tig0033130:+19371 None:intergenic
GTGGATGTTAATTTCACCAA+AGG 0.543624 tig0033130:+11426 None:intergenic
CTATACTGATAGATAAAGAC+AGG 0.546864 tig0033130:-11981 Msa1450870:CDS
GGCGCTGGTGCTTCTATGCA+TGG 0.548075 tig0033130:-15789 Msa1450870:CDS
CTAAGCTTGATGCTGAAGGA+TGG 0.548086 tig0033130:-11802 Msa1450870:CDS
AGAAATATTTCACGATGATG+AGG 0.552047 tig0033130:-17694 Msa1450870:CDS
CCTCGAAGAAATCCTTGCTA+TGG 0.552990 tig0033130:+12095 None:intergenic
AACAGGATAGTGTTTATCAC+AGG 0.554120 tig0033130:-13028 Msa1450870:intron
TTAACAAGCTCCAATTTGGA+AGG 0.557519 tig0033130:+11851 None:intergenic
CAATTCTATACTCGTAAACA+AGG 0.558815 tig0033130:+12140 None:intergenic
TGGTCTTACAGGTGCTAGGT+TGG 0.559352 tig0033130:-14834 Msa1450870:CDS
CAAATTGCAGGAGAATATGT+TGG 0.561540 tig0033130:-14854 Msa1450870:intron
CAAGGCAGGCTCTTAGGTGT+TGG 0.562954 tig0033130:-12169 Msa1450870:CDS
TAATCAATAAGTGTTTCTCT+AGG 0.569952 tig0033130:-12734 Msa1450870:CDS
GGCAACATACAGTAAGCCTC+AGG 0.571282 tig0033130:-15944 Msa1450870:intron
GCAAGTTGTTGAACCTCTTG+GGG 0.573050 tig0033130:+11765 None:intergenic
ACATTTATCAGGGAAATGGA+AGG 0.587193 tig0033130:-17057 Msa1450870:intron
ATGTTGGTCTTACAGGTGCT+AGG 0.591347 tig0033130:-14838 Msa1450870:CDS
TCACCAAAGGAAAACACGAA+TGG 0.592926 tig0033130:+11439 None:intergenic
GAAATATTTCACGATGATGA+GGG 0.593731 tig0033130:-17693 Msa1450870:CDS
CATTTATCAGGGAAATGGAA+GGG 0.594293 tig0033130:-17056 Msa1450870:intron
ATTGTTTGTCATATCCTACA+AGG 0.594529 tig0033130:-12121 Msa1450870:CDS
TAAAGCTTTGAAATAGCATG+TGG 0.595907 tig0033130:+11740 None:intergenic
GGTGCAGAAATGCTTGCTTG+TGG 0.601628 tig0033130:-14809 Msa1450870:CDS
GTATTGTGCAAAGGTTCTGG+TGG 0.605879 tig0033130:-19170 Msa1450870:intron
ATCAACAATCTCATCAGTTG+AGG 0.610947 tig0033130:-11713 Msa1450870:three_prime_UTR
AGCTTTGAAATAGCATGTGG+AGG 0.613403 tig0033130:+11743 None:intergenic
GTGAAGACCGAGGAAGAGGA+AGG 0.614974 tig0033130:+19356 None:intergenic
ATTGGAAGAATCATTATGCA+AGG 0.625818 tig0033130:-13117 Msa1450870:CDS
GTATGTAGCATACCGATGAA+GGG 0.626747 tig0033130:+14768 None:intergenic
AGGAAGGACCCAAAATGGAT+GGG 0.627598 tig0033130:+19372 None:intergenic
GTTGCTAATGACGCAAGAGG+AGG 0.628706 tig0033130:-17004 Msa1450870:intron
TCGGTCTTCACCAACGACCA+TGG 0.637430 tig0033130:-19344 Msa1450870:exon
TTTCATCGAGACCACATCAG+TGG 0.638922 tig0033130:+11407 None:intergenic
AGATAAAGACAGGAAACCAA+AGG 0.644265 tig0033130:-11971 Msa1450870:intron
GCTGTTGCTAATGACGCAAG+AGG 0.648895 tig0033130:-17007 Msa1450870:CDS
GAAATTAACATCCACTGATG+TGG 0.660086 tig0033130:-11418 Msa1450870:three_prime_UTR
CTTAATGGAATCGTCATGGG+AGG 0.671508 tig0033130:-15813 Msa1450870:CDS
CCTACAAGGACACCATAGCA+AGG 0.672173 tig0033130:-12107 Msa1450870:CDS
GGAAGAATCATTATGCAAGG+TGG 0.673416 tig0033130:-13114 Msa1450870:CDS
AAGATTTGGAGTTCCCCAAG+AGG 0.673816 tig0033130:-11778 Msa1450870:CDS
GTGTTTCTCTAGGAAAACAG+TGG 0.677969 tig0033130:-12724 Msa1450870:CDS
ATGGTCGTTGGTGAAGACCG+AGG 0.702491 tig0033130:+19346 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATAACTAATGTATT+TGG + tig0033130:11455-11474 None:intergenic 10.0%
!!! TTATTTTTAAATATTTGTAC+TGG - tig0033130:13009-13028 Msa1450870:intron 10.0%
!! TAGTTAAAAAAAAATGTAAT+TGG - tig0033130:13365-13384 Msa1450870:intron 10.0%
!!! ATTAATTATTTGTTTTCATA+TGG - tig0033130:14867-14886 Msa1450870:intron 10.0%
!! ATATAAAATGAATTATTTGA+TGG - tig0033130:14932-14951 Msa1450870:intron 10.0%
!!! GATTTTGATATAATTTATTT+TGG + tig0033130:17103-17122 None:intergenic 10.0%
!! AAAGTAAGAAAAAAAATTAA+TGG + tig0033130:18585-18604 None:intergenic 10.0%
!!! TATTTGTATTGTATTTATTT+TGG - tig0033130:18990-19009 Msa1450870:intron 10.0%
!!! TAAGTATTTTTATTTCCTTT+TGG - tig0033130:12940-12959 Msa1450870:intron 15.0%
!! TATTAAATGATTCAGTTATT+AGG - tig0033130:14094-14113 Msa1450870:intron 15.0%
!! TTTAGTTATTATAAAGGATT+AGG + tig0033130:15210-15229 None:intergenic 15.0%
!! AAGTTAAGTAAATGAAAATT+TGG + tig0033130:15494-15513 None:intergenic 15.0%
!!! TTTCATTTACTTAACTTTTA+TGG - tig0033130:15497-15516 Msa1450870:intron 15.0%
!! GTGAAATAACTTTAAATTAA+AGG + tig0033130:16820-16839 None:intergenic 15.0%
!! TTGTAACATTTAATACTTTA+TGG + tig0033130:18441-18460 None:intergenic 15.0%
!! AATTACAAAATATCTAAATC+TGG + tig0033130:18542-18561 None:intergenic 15.0%
!! TAGTAAGAAAAATTGAAAAT+TGG + tig0033130:18660-18679 None:intergenic 15.0%
!! AACATTTATCAAATTCAATA+AGG + tig0033130:19438-19457 None:intergenic 15.0%
!! AATGTAAAATTATGCATGTT+TGG - tig0033130:12118-12137 Msa1450870:CDS 20.0%
!!! AAAATTGATTTTGACATGTT+TGG + tig0033130:12248-12267 None:intergenic 20.0%
!! TTAATTTCATTGTAATGTGA+TGG - tig0033130:12626-12645 Msa1450870:intron 20.0%
!! TTGATCCAAAATAATATAGA+TGG + tig0033130:12785-12804 None:intergenic 20.0%
!!! AATGAATTTTTCAAATTCTG+AGG - tig0033130:12835-12854 Msa1450870:intron 20.0%
!! ATAAGTAAGAGAATAGAAAA+TGG + tig0033130:13137-13156 None:intergenic 20.0%
!! AAAATTAAATGGAAAATGCT+CGG + tig0033130:13275-13294 None:intergenic 20.0%
!! GCAAAATGCAAAAAATTAAA+TGG + tig0033130:13286-13305 None:intergenic 20.0%
!!! TGTGTTTTATCTATAAAAGA+GGG + tig0033130:13419-13438 None:intergenic 20.0%
!!! TTACTACTAATTGGTTTTAA+TGG + tig0033130:13504-13523 None:intergenic 20.0%
!! TTTATTAGGTTACTACTAAT+TGG + tig0033130:13513-13532 None:intergenic 20.0%
!! TAGTAACCTAATAAATATTG+AGG - tig0033130:13518-13537 Msa1450870:intron 20.0%
!! AGTAACCTAATAAATATTGA+GGG - tig0033130:13519-13538 Msa1450870:intron 20.0%
!! TACATTCTATGTTAAGAAAA+GGG - tig0033130:13658-13677 Msa1450870:intron 20.0%
!!! AATATGGATTTTCTTACTTT+AGG - tig0033130:13815-13834 Msa1450870:intron 20.0%
!! GTTTGATGAATTGAAAATAA+AGG + tig0033130:13928-13947 None:intergenic 20.0%
!! CAAGAATGCAATTAATATTA+TGG + tig0033130:13964-13983 None:intergenic 20.0%
!! AATAAAATAACAATGAGTGA+TGG + tig0033130:14078-14097 None:intergenic 20.0%
!!! TTTTGTAAAAGTATGGTTTT+TGG + tig0033130:14280-14299 None:intergenic 20.0%
!!! TATTTGTTTTCATATGGTAT+AGG - tig0033130:14873-14892 Msa1450870:intron 20.0%
!!! TCACTGTTTTTTTCTTTTTT+TGG + tig0033130:15413-15432 None:intergenic 20.0%
!! AAAAAGAAAAAAACAGTGAT+AGG - tig0033130:15414-15433 Msa1450870:intron 20.0%
!! TCTCTATGATTGATTATAAT+TGG - tig0033130:15649-15668 Msa1450870:intron 20.0%
!! CTCTATGATTGATTATAATT+GGG - tig0033130:15650-15669 Msa1450870:intron 20.0%
!! AAGTTTATCATGAAATATCT+AGG - tig0033130:16302-16321 Msa1450870:intron 20.0%
!! AGTTTATCATGAAATATCTA+GGG - tig0033130:16303-16322 Msa1450870:intron 20.0%
!! TAAATTAAAGGAAATGACAA+AGG + tig0033130:16808-16827 None:intergenic 20.0%
!! ATATACAATTTGTGAAGATT+AGG - tig0033130:17357-17376 Msa1450870:intron 20.0%
!! TATATGATGTTAAAACTCTT+TGG - tig0033130:17691-17710 Msa1450870:CDS 20.0%
!! AATATTGCGTGATAAAATTA+TGG + tig0033130:18309-18328 None:intergenic 20.0%
!!! TAATTTTATCACGCAATATT+AGG - tig0033130:18309-18328 Msa1450870:intron 20.0%
!! AAAAAAATTAATGGCTTAAG+AGG + tig0033130:18576-18595 None:intergenic 20.0%
!! GAAAAATTGAAAATTGGAAA+AGG + tig0033130:18654-18673 None:intergenic 20.0%
!! AACTAATTTATGTCTAGTTA+TGG + tig0033130:18959-18978 None:intergenic 20.0%
!!! TTATATAAGATCAACTTGTT+CGG + tig0033130:19285-19304 None:intergenic 20.0%
! TCAATATCACTTTCATTCAT+CGG - tig0033130:11647-11666 Msa1450870:three_prime_UTR 25.0%
!!! AACTGATTCTACCTATTTTT+TGG - tig0033130:11705-11724 Msa1450870:three_prime_UTR 25.0%
! TTTGCACAATACCAAAAAAT+AGG + tig0033130:11719-11738 None:intergenic 25.0%
!!! TATTTTTTGGTATTGTGCAA+AGG - tig0033130:11718-11737 Msa1450870:three_prime_UTR 25.0%
!!! ATTTTAACTAACGGAATCAA+AGG + tig0033130:11915-11934 None:intergenic 25.0%
!!! CGAGAATCAATTTTAACTAA+CGG + tig0033130:11924-11943 None:intergenic 25.0%
!! TTAGTTAAAATTGATTCTCG+AGG - tig0033130:11924-11943 Msa1450870:intron 25.0%
!!! CTAGAATTGATTTTTTCACA+CGG - tig0033130:12026-12045 Msa1450870:intron 25.0%
! GACTAAACATAATTTATACG+TGG + tig0033130:12150-12169 None:intergenic 25.0%
!! ATTAATTTGAAGATGAAGCT+AGG + tig0033130:12188-12207 None:intergenic 25.0%
! CTTCATCTTCAAATTAATTC+TGG - tig0033130:12190-12209 Msa1450870:intron 25.0%
! AATATATTTGAGCCTATGTT+TGG + tig0033130:12298-12317 None:intergenic 25.0%
! AAGATAACGTGATTTATGTT+TGG + tig0033130:12348-12367 None:intergenic 25.0%
! CAATTACTTCAGAAATAAGT+GGG + tig0033130:12659-12678 None:intergenic 25.0%
! ACAATAATTAAAGGCTAAGA+GGG + tig0033130:12741-12760 None:intergenic 25.0%
! TGTCACAAGACAATAATTAA+AGG + tig0033130:12750-12769 None:intergenic 25.0%
!! TCTAGCCATCTATATTATTT+TGG - tig0033130:12777-12796 Msa1450870:intron 25.0%
!! GATGACATTTTTGTCATTAT+TGG + tig0033130:12972-12991 None:intergenic 25.0%
!!! TTTTTTGAAAGAGTTCAAAC+AGG + tig0033130:13086-13105 None:intergenic 25.0%
! TTCTATTCTCTTACTTATCT+TGG - tig0033130:13139-13158 Msa1450870:intron 25.0%
! TGTTAAATTGATTGTCCTAA+AGG - tig0033130:13236-13255 Msa1450870:intron 25.0%
!! GTGTGTTTTATCTATAAAAG+AGG + tig0033130:13420-13439 None:intergenic 25.0%
! TCTTAACATAGAATGTACAT+CGG + tig0033130:13655-13674 None:intergenic 25.0%
! GTACATTCTATGTTAAGAAA+AGG - tig0033130:13657-13676 Msa1450870:intron 25.0%
!! TACTTTAGGTTACATTTATC+AGG - tig0033130:13829-13848 Msa1450870:intron 25.0%
!! ACTTTAGGTTACATTTATCA+GGG - tig0033130:13830-13849 Msa1450870:intron 25.0%
! ATTATCAGTAACCATACATA+GGG - tig0033130:14117-14136 Msa1450870:intron 25.0%
! CAACTTGAAATAAAAAGACT+TGG + tig0033130:14232-14251 None:intergenic 25.0%
!!! CAAGTCTTTTTATTTCAAGT+TGG - tig0033130:14230-14249 Msa1450870:intron 25.0%
!! CTAAGGTTTTTGTAAAAGTA+TGG + tig0033130:14287-14306 None:intergenic 25.0%
!! CATACTTTTACAAAAACCTT+AGG - tig0033130:14285-14304 Msa1450870:intron 25.0%
! TACTAACATGAATGTAATGA+AGG + tig0033130:14381-14400 None:intergenic 25.0%
! TATCCCAAAATACATTGTAA+GGG + tig0033130:14675-14694 None:intergenic 25.0%
! TTATCCCAAAATACATTGTA+AGG + tig0033130:14676-14695 None:intergenic 25.0%
! TGTTGCAATCTTAATTTAAG+AGG - tig0033130:14736-14755 Msa1450870:intron 25.0%
! GTTGCAATCTTAATTTAAGA+GGG - tig0033130:14737-14756 Msa1450870:intron 25.0%
!! AACAAAACTTACTGTTTTCT+CGG + tig0033130:15151-15170 None:intergenic 25.0%
!! GAGATAATTTAAGATACTCT+AGG - tig0033130:15251-15270 Msa1450870:intron 25.0%
! ATACCTTTGACATTATGTTA+TGG + tig0033130:15311-15330 None:intergenic 25.0%
! ATTTGGATGCTAAATAGATA+GGG + tig0033130:15477-15496 None:intergenic 25.0%
! AATTTGGATGCTAAATAGAT+AGG + tig0033130:15478-15497 None:intergenic 25.0%
! TAGTCTAGACAAATAATATG+AGG + tig0033130:15595-15614 None:intergenic 25.0%
! ATCAAAATCAAATACTTCCA+TGG - tig0033130:15919-15938 Msa1450870:intron 25.0%
!!! TCATAATCAAAAGTATTCCA+TGG + tig0033130:15939-15958 None:intergenic 25.0%
!!! TCCTATTTTTTCTTTCCTTT+TGG - tig0033130:16016-16035 Msa1450870:intron 25.0%
! TCCAAAAGGAAAGAAAAAAT+AGG + tig0033130:16020-16039 None:intergenic 25.0%
!!! TACAGTTTTTTAAGGATTGT+AGG + tig0033130:16536-16555 None:intergenic 25.0%
! AGTGCAACATTATATAATCA+GGG + tig0033130:16591-16610 None:intergenic 25.0%
! TAAGAAAATGGAAAAAGTGA+AGG + tig0033130:16747-16766 None:intergenic 25.0%
! TGGAAAACGTATTAAGAAAA+TGG + tig0033130:16759-16778 None:intergenic 25.0%
!! GAAAGTATATAATGTAGACA+TGG + tig0033130:16779-16798 None:intergenic 25.0%
! ATCAAGCATACAAATCAATT+TGG + tig0033130:16925-16944 None:intergenic 25.0%
! AAGTAATTCTGACTATAAGT+TGG + tig0033130:17076-17095 None:intergenic 25.0%
! AAAGAAATTAAGTGTGTGTT+TGG + tig0033130:17145-17164 None:intergenic 25.0%
!! GAGATTCATTTTAAACAAGA+TGG - tig0033130:17553-17572 Msa1450870:intron 25.0%
!!! TGCACAATTTTTTTTCCTTA+AGG - tig0033130:17657-17676 Msa1450870:intron 25.0%
!!! TTTTTTTTCCTTAAGGACTA+TGG - tig0033130:17664-17683 Msa1450870:CDS 25.0%
! TATAAATACCATAGTCCTTA+AGG + tig0033130:17675-17694 None:intergenic 25.0%
!! ATGTTAAAACTCTTTGGTTT+GGG - tig0033130:17697-17716 Msa1450870:CDS 25.0%
!! ATAAACACTATCCTGTTTTA+GGG + tig0033130:17866-17885 None:intergenic 25.0%
! ACAATTGAAACATATCACAT+TGG - tig0033130:18078-18097 Msa1450870:intron 25.0%
! TAAGCAAATAGAAAGAAGAA+AGG + tig0033130:18116-18135 None:intergenic 25.0%
! TAATCAATAAGTGTTTCTCT+AGG - tig0033130:18163-18182 Msa1450870:intron 25.0%
! CCAATCTAAGAAAAACTTTA+AGG + tig0033130:18411-18430 None:intergenic 25.0%
!! CCTTAAAGTTTTTCTTAGAT+TGG - tig0033130:18408-18427 Msa1450870:intron 25.0%
! CGTTAAAACTGACAATAAAA+AGG + tig0033130:18489-18508 None:intergenic 25.0%
! ATTGAAAATTGGAAAAGGAT+TGG + tig0033130:18649-18668 None:intergenic 25.0%
! TGATTTAATGTCATACTCAA+TGG - tig0033130:18867-18886 Msa1450870:intron 25.0%
! ATTGATTATGCCTTTATTAG+TGG - tig0033130:19020-19039 Msa1450870:intron 25.0%
! TTGATTATGCCTTTATTAGT+GGG - tig0033130:19021-19040 Msa1450870:intron 25.0%
! AACTTAATGTTGTGATTCTT+TGG + tig0033130:19224-19243 None:intergenic 25.0%
!!! AACATTAAGTTGATTCTTGA+AGG - tig0033130:19233-19252 Msa1450870:intron 25.0%
!! ATCAACTAATTTTTGTTGAC+AGG + tig0033130:19353-19372 None:intergenic 25.0%
! GAATGCTCTCTCTTTTTATA+TGG - tig0033130:11799-11818 Msa1450870:CDS 30.0%
! ATTTTTACTCCTCCAAACAT+AGG - tig0033130:12283-12302 Msa1450870:intron 30.0%
CTAGAATCAATTTCTGATGT+AGG + tig0033130:12542-12561 None:intergenic 30.0%
GCAATTACTTCAGAAATAAG+TGG + tig0033130:12660-12679 None:intergenic 30.0%
GACAATAATTAAAGGCTAAG+AGG + tig0033130:12742-12761 None:intergenic 30.0%
CATTATTGGTGAAAACCAAA+AGG + tig0033130:12958-12977 None:intergenic 30.0%
AAAGAGTTCAAACAGGTAAA+TGG + tig0033130:13079-13098 None:intergenic 30.0%
AGAAATATTTCACGATGATG+AGG - tig0033130:13203-13222 Msa1450870:intron 30.0%
GAAATATTTCACGATGATGA+GGG - tig0033130:13204-13223 Msa1450870:intron 30.0%
AGGACAATCAATTTAACATC+AGG + tig0033130:13234-13253 None:intergenic 30.0%
GGTAAATGGAAATTACCTTT+AGG + tig0033130:13254-13273 None:intergenic 30.0%
!!! TGCATTTTGCTATTGTTCTA+TGG - tig0033130:13296-13315 Msa1450870:intron 30.0%
GGAAAAGAGAGAATAACAAT+TGG - tig0033130:13317-13336 Msa1450870:intron 30.0%
!!! TACTAATTGGTTTTAATGGC+AGG + tig0033130:13500-13519 None:intergenic 30.0%
TGAGTCCCTCAATATTTATT+AGG + tig0033130:13527-13546 None:intergenic 30.0%
TCTCATCTCAATATGAATTC+TGG - tig0033130:13572-13591 Msa1450870:intron 30.0%
GATTATCAGTAACCATACAT+AGG - tig0033130:14116-14135 Msa1450870:intron 30.0%
TTATCAGTAACCATACATAG+GGG - tig0033130:14118-14137 Msa1450870:intron 30.0%
TAAAACATAACCCCTATGTA+TGG + tig0033130:14131-14150 None:intergenic 30.0%
! ATACATAGGGGTTATGTTTT+AGG - tig0033130:14130-14149 Msa1450870:intron 30.0%
TAATGAAAAACGACCATGTT+TGG - tig0033130:14176-14195 Msa1450870:intron 30.0%
ATAGATGATAGTTCCAAACA+TGG + tig0033130:14192-14211 None:intergenic 30.0%
TAACCTCAATACTATGTTGA+TGG - tig0033130:14348-14367 Msa1450870:intron 30.0%
AACAGAAATAAAAGTCACCA+GGG + tig0033130:14611-14630 None:intergenic 30.0%
AAACAGAAATAAAAGTCACC+AGG + tig0033130:14612-14631 None:intergenic 30.0%
!!! GGTGACTTTTATTTCTGTTT+TGG - tig0033130:14612-14631 Msa1450870:intron 30.0%
!!! GACTTTTATTTCTGTTTTGG+TGG - tig0033130:14615-14634 Msa1450870:intron 30.0%
ATCCCAAAATACATTGTAAG+GGG + tig0033130:14674-14693 None:intergenic 30.0%
! TTTTATATTCTCCTCCCATA+AGG + tig0033130:14802-14821 None:intergenic 30.0%
TTTCATATGGTATAGGTGAT+TGG - tig0033130:14880-14899 Msa1450870:intron 30.0%
ATTTGTTTCCAAACATTTGC+AGG - tig0033130:15053-15072 Msa1450870:intron 30.0%
AATTGAAACCTGCAAATGTT+TGG + tig0033130:15064-15083 None:intergenic 30.0%
TTGCAGGTTTCAATTCTTAA+TGG - tig0033130:15069-15088 Msa1450870:intron 30.0%
AATTCTTAATGGAATCGTCA+TGG - tig0033130:15080-15099 Msa1450870:intron 30.0%
ATTCTTAATGGAATCGTCAT+GGG - tig0033130:15081-15100 Msa1450870:intron 30.0%
ATGCCATAACATAATGTCAA+AGG - tig0033130:15305-15324 Msa1450870:CDS 30.0%
AAACAAATTTCCTACAACAG+TGG + tig0033130:15385-15404 None:intergenic 30.0%
! AACTTTTATGGTTGTACTTG+TGG - tig0033130:15509-15528 Msa1450870:intron 30.0%
AAATAATCCCAAAGCTGTTT+CGG + tig0033130:15559-15578 None:intergenic 30.0%
TATTATTTGTCTAGACTAGC+TGG - tig0033130:15597-15616 Msa1450870:intron 30.0%
! TCCAATCTTTTCATCGTTTT+TGG - tig0033130:15700-15719 Msa1450870:intron 30.0%
ATTGTTTACTTTCTCTTGCA+TGG - tig0033130:15883-15902 Msa1450870:intron 30.0%
AGGAAAGAAAAAATAGGAGA+CGG + tig0033130:16014-16033 None:intergenic 30.0%
! TCATAAGAAGTGTACATTCA+TGG - tig0033130:16218-16237 Msa1450870:intron 30.0%
! CATAAGAAGTGTACATTCAT+GGG - tig0033130:16219-16238 Msa1450870:intron 30.0%
! TGAAAACCATTGGTTAACAA+TGG + tig0033130:16268-16287 None:intergenic 30.0%
! ATTGTTAACCAATGGTTTTC+AGG - tig0033130:16267-16286 Msa1450870:intron 30.0%
!! TGTGAATTTTAATAGACCAG+GGG + tig0033130:16513-16532 None:intergenic 30.0%
!! GTGTGAATTTTAATAGACCA+GGG + tig0033130:16514-16533 None:intergenic 30.0%
!!! GTTCATGGTACAGTTTTTTA+AGG + tig0033130:16544-16563 None:intergenic 30.0%
TGCAACATTATATAATCAGG+GGG + tig0033130:16589-16608 None:intergenic 30.0%
GTGCAACATTATATAATCAG+GGG + tig0033130:16590-16609 None:intergenic 30.0%
GAGTGCAACATTATATAATC+AGG + tig0033130:16592-16611 None:intergenic 30.0%
AAATGGAAAAAGTGAAGGAA+GGG + tig0033130:16742-16761 None:intergenic 30.0%
AAAATGGAAAAAGTGAAGGA+AGG + tig0033130:16743-16762 None:intergenic 30.0%
AAGGAAATGACAAAGGATAA+AGG + tig0033130:16801-16820 None:intergenic 30.0%
! GTGTTATTCTAGTGTATGTT+TGG - tig0033130:16861-16880 Msa1450870:intron 30.0%
AATTGTAATCCTTCCAAAAG+TGG + tig0033130:16889-16908 None:intergenic 30.0%
TGATTGTTGTCGAATAGAAT+TGG - tig0033130:16941-16960 Msa1450870:intron 30.0%
!!! AAATTTTAGAACTTCCCCAA+TGG + tig0033130:17252-17271 None:intergenic 30.0%
! TATGCATGTAAACTTTTGAG+TGG - tig0033130:17408-17427 Msa1450870:intron 30.0%
CATTGAAACTGTTGAAAGTA+AGG + tig0033130:17598-17617 None:intergenic 30.0%
CTTACTTTCAACAGTTTCAA+TGG - tig0033130:17596-17615 Msa1450870:intron 30.0%
GATGTTAAAACTCTTTGGTT+TGG - tig0033130:17696-17715 Msa1450870:CDS 30.0%
!! TGTTAAAACTCTTTGGTTTG+GGG - tig0033130:17698-17717 Msa1450870:CDS 30.0%
TTGCAAAAGGCAATAAAACA+GGG + tig0033130:17738-17757 None:intergenic 30.0%
ATTGCAAAAGGCAATAAAAC+AGG + tig0033130:17739-17758 None:intergenic 30.0%
ATTGGAAGAATCATTATGCA+AGG - tig0033130:17780-17799 Msa1450870:intron 30.0%
GTCAATAATTGCAGATACTA+TGG + tig0033130:17824-17843 None:intergenic 30.0%
! GATAAACACTATCCTGTTTT+AGG + tig0033130:17867-17886 None:intergenic 30.0%
TATTGTCTGTTAAATTCCCT+TGG - tig0033130:17929-17948 Msa1450870:intron 30.0%
ATTGTCTGTTAAATTCCCTT+GGG - tig0033130:17930-17949 Msa1450870:intron 30.0%
ATGACATGTAATTTGACAGA+CGG + tig0033130:17967-17986 None:intergenic 30.0%
TCATAAACATATATCTGTCC+TGG - tig0033130:17983-18002 Msa1450870:intron 30.0%
CATAAACATATATCTGTCCT+GGG - tig0033130:17984-18003 Msa1450870:intron 30.0%
!! AGAAAAACTTTAAGGCTTGT+CGG + tig0033130:18403-18422 None:intergenic 30.0%
! TTACCTTTTCAGATTAGACA+AGG - tig0033130:18710-18729 Msa1450870:intron 30.0%
CAATTCTATACTCGTAAACA+AGG + tig0033130:18760-18779 None:intergenic 30.0%
ATTGTTTGTCATATCCTACA+AGG - tig0033130:18776-18795 Msa1450870:intron 30.0%
GAAACATGTGTATGAATTGT+TGG + tig0033130:18832-18851 None:intergenic 30.0%
CTATACTGATAGATAAAGAC+AGG - tig0033130:18916-18935 Msa1450870:intron 30.0%
!! TAAAGCTTTGAAATAGCATG+TGG + tig0033130:19160-19179 None:intergenic 30.0%
!! CATGCTATTTCAAAGCTTTA+AGG - tig0033130:19160-19179 Msa1450870:CDS 30.0%
AATAGGTAGAATCAGTTTCG+AGG + tig0033130:11702-11721 None:intergenic 35.0%
!!! GAGAGAGCATTCAATTGTTT+TGG + tig0033130:11791-11810 None:intergenic 35.0%
! TTTTTCACACGGTGTATACT+TGG - tig0033130:12037-12056 Msa1450870:intron 35.0%
ATATTTGAGCCTATGTTTGG+AGG + tig0033130:12295-12314 None:intergenic 35.0%
!! GAACATTTAGCTTTCGTGTT+TGG - tig0033130:12440-12459 Msa1450870:intron 35.0%
TGACAGGATGTAAAGATGTT+TGG - tig0033130:12513-12532 Msa1450870:CDS 35.0%
! GAATCAATTCCAAGCCATTT+TGG + tig0033130:12606-12625 None:intergenic 35.0%
AAAACCACATGAAGATGTGT+TGG - tig0033130:12686-12705 Msa1450870:intron 35.0%
AAACCACATGAAGATGTGTT+GGG - tig0033130:12687-12706 Msa1450870:intron 35.0%
AAACTAAATGCACTCTTCAG+TGG + tig0033130:12917-12936 None:intergenic 35.0%
TTCAAACAGGTAAATGGAAG+AGG + tig0033130:13073-13092 None:intergenic 35.0%
GTAGCTTAGATACCTATAAC+AGG + tig0033130:13182-13201 None:intergenic 35.0%
AATGGAAAATGCTCGGTAAA+TGG + tig0033130:13268-13287 None:intergenic 35.0%
ATTAAAATATGACATCCCCG+AGG - tig0033130:13462-13481 Msa1450870:intron 35.0%
TTAAAATATGACATCCCCGA+GGG - tig0033130:13463-13482 Msa1450870:intron 35.0%
ATGCACGTATGTTTCTCATT+AGG - tig0033130:13713-13732 Msa1450870:intron 35.0%
TCTCATCTTCGAAGAGAATA+TGG - tig0033130:13799-13818 Msa1450870:intron 35.0%
GGTTACATTTATCAGGGAAA+TGG - tig0033130:13836-13855 Msa1450870:intron 35.0%
ACATTTATCAGGGAAATGGA+AGG - tig0033130:13840-13859 Msa1450870:intron 35.0%
CATTTATCAGGGAAATGGAA+GGG - tig0033130:13841-13860 Msa1450870:intron 35.0%
AAGCCATCAACATAGTATTG+AGG + tig0033130:14354-14373 None:intergenic 35.0%
AATTTGTCGAGTGAGGTTAT+CGG + tig0033130:14452-14471 None:intergenic 35.0%
CAAGCAAAACTCAATAGAGA+TGG + tig0033130:14506-14525 None:intergenic 35.0%
! ACTCCCCTTACAATGTATTT+TGG - tig0033130:14668-14687 Msa1450870:intron 35.0%
! CTCCCCTTACAATGTATTTT+GGG - tig0033130:14669-14688 Msa1450870:intron 35.0%
CAACAATTGTCCCAATTACT+TGG + tig0033130:14721-14740 None:intergenic 35.0%
CAATTAGAAAGAGTTACCTG+AGG + tig0033130:14972-14991 None:intergenic 35.0%
TAGGATTAAAAACCGATCCT+AGG - tig0033130:15270-15289 Msa1450870:intron 35.0%
CTTAGTTTATCTCCTAGGAT+CGG + tig0033130:15285-15304 None:intergenic 35.0%
! TTTTTCTTCTCCACTGTTGT+AGG - tig0033130:15372-15391 Msa1450870:intron 35.0%
CAGTGATAGGAAAGAAATGT+TGG - tig0033130:15427-15446 Msa1450870:intron 35.0%
! AATAATCCCAAAGCTGTTTC+GGG + tig0033130:15558-15577 None:intergenic 35.0%
TTGGGATTATTTCCTGATGT+AGG - tig0033130:15567-15586 Msa1450870:intron 35.0%
!!! TCTAGACTAGCTGGATTTTT+TGG - tig0033130:15606-15625 Msa1450870:intron 35.0%
GCCAAAAACGATGAAAAGAT+TGG + tig0033130:15704-15723 None:intergenic 35.0%
GTGTGTGTGTGTTTGTAAAT+TGG + tig0033130:15786-15805 None:intergenic 35.0%
TATATTCTGTGTGTGCACAT+GGG + tig0033130:15818-15837 None:intergenic 35.0%
TTTACTTTCTCTTGCATGGT+TGG - tig0033130:15887-15906 Msa1450870:intron 35.0%
GAAAGAAAAAATAGGAGACG+GGG + tig0033130:16012-16031 None:intergenic 35.0%
GGAAAGAAAAAATAGGAGAC+GGG + tig0033130:16013-16032 None:intergenic 35.0%
!! CCTGCAATTTGTTTTCCAAA+AGG + tig0033130:16034-16053 None:intergenic 35.0%
!! CCTTTTGGAAAACAAATTGC+AGG - tig0033130:16031-16050 Msa1450870:intron 35.0%
CAAATTGCAGGAGAATATGT+TGG - tig0033130:16043-16062 Msa1450870:intron 35.0%
! AACACATTTTGTCCCTTCAT+CGG - tig0033130:16117-16136 Msa1450870:intron 35.0%
!! TTTCTGCTGATTTGCATCTT+TGG - tig0033130:16170-16189 Msa1450870:intron 35.0%
! GAAGTACCATTGTTAACCAA+TGG - tig0033130:16259-16278 Msa1450870:intron 35.0%
!!! ACTGTATGCATTTTTAGCCA+TGG - tig0033130:16428-16447 Msa1450870:intron 35.0%
!! GTGAATTTTAATAGACCAGG+GGG + tig0033130:16512-16531 None:intergenic 35.0%
!! GGTGTGAATTTTAATAGACC+AGG + tig0033130:16515-16534 None:intergenic 35.0%
!! TTCATGGTCAGTTTTTAAGG+GGG + tig0033130:16566-16585 None:intergenic 35.0%
!! GTTCATGGTCAGTTTTTAAG+GGG + tig0033130:16567-16586 None:intergenic 35.0%
! GGTTCATGGTCAGTTTTTAA+GGG + tig0033130:16568-16587 None:intergenic 35.0%
TTATATAATCAGGGGGTTCA+TGG + tig0033130:16582-16601 None:intergenic 35.0%
AAAAGATACAAGTTCAGTGC+TGG + tig0033130:16634-16653 None:intergenic 35.0%
!! TGTATGTTTGGTTCCACTTT+TGG - tig0033130:16873-16892 Msa1450870:intron 35.0%
ATCCCAAAAATGAAGCCATT+GGG - tig0033130:17234-17253 Msa1450870:intron 35.0%
CCATGATCATCACTTTATCT+TGG + tig0033130:17280-17299 None:intergenic 35.0%
CCAAGATAAAGTGATGATCA+TGG - tig0033130:17277-17296 Msa1450870:intron 35.0%
! GCTTGAAAAAGGTTTAAGGT+TGG + tig0033130:17523-17542 None:intergenic 35.0%
CCTAGCTTGAAAAAGGTTTA+AGG + tig0033130:17527-17546 None:intergenic 35.0%
!!! CCTTAAACCTTTTTCAAGCT+AGG - tig0033130:17524-17543 Msa1450870:intron 35.0%
CTATGTACCTAGCTTGAAAA+AGG + tig0033130:17534-17553 None:intergenic 35.0%
TTCTGTGCATACATTGCAAA+AGG + tig0033130:17751-17770 None:intergenic 35.0%
TGCACAGAAATTATCGTCAT+TGG - tig0033130:17762-17781 Msa1450870:intron 35.0%
ATAATTGCAGATACTATGGC+TGG + tig0033130:17820-17839 None:intergenic 35.0%
AACAGGATAGTGTTTATCAC+AGG - tig0033130:17869-17888 Msa1450870:intron 35.0%
TTATTGTGATTGCTCATTGC+AGG - tig0033130:18133-18152 Msa1450870:intron 35.0%
CTATGAGTAAAGCAGATAGT+TGG - tig0033130:18341-18360 Msa1450870:intron 35.0%
AATAAGCGAACAAACCTATG+TGG + tig0033130:18513-18532 None:intergenic 35.0%
TTAATGGCTTAAGAGGCAAA+TGG + tig0033130:18569-18588 None:intergenic 35.0%
AATGGTTATGTCCTACTTCA+GGG - tig0033130:18885-18904 Msa1450870:intron 35.0%
AGATAAAGACAGGAAACCAA+AGG - tig0033130:18926-18945 Msa1450870:intron 35.0%
TTAACAAGCTCCAATTTGGA+AGG + tig0033130:19049-19068 None:intergenic 35.0%
!! TTCCAAATTGGAGCTTGTTA+AGG - tig0033130:19048-19067 Msa1450870:intron 35.0%
ATCCTTAACAAGCTCCAATT+TGG + tig0033130:19053-19072 None:intergenic 35.0%
ATCAACAATCTCATCAGTTG+AGG - tig0033130:19184-19203 Msa1450870:intron 35.0%
GTGGATGTTAATTTCACCAA+AGG + tig0033130:19474-19493 None:intergenic 35.0%
GAAATTAACATCCACTGATG+TGG - tig0033130:19479-19498 Msa1450870:five_prime_UTR 35.0%
AACCTGATCTTCATCCAGTT+TGG + tig0033130:11588-11607 None:intergenic 40.0%
TTGGTATTGTGCAAAGGTTC+TGG - tig0033130:11724-11743 Msa1450870:exon 40.0%
!! CGAGAGTTTTGACATTGAAC+AGG - tig0033130:11765-11784 Msa1450870:CDS 40.0%
CACGTTAGAATCAGTTCTAC+AGG + tig0033130:11981-12000 None:intergenic 40.0%
TGCATAACCAAACACACGTA+CGG - tig0033130:12417-12436 Msa1450870:intron 40.0%
ACATCCTGTCAAACTACGAT+TGG + tig0033130:12504-12523 None:intergenic 40.0%
!! CCATTTTGGAAGCTACACAT+GGG + tig0033130:12592-12611 None:intergenic 40.0%
AACCACATGAAGATGTGTTG+GGG - tig0033130:12688-12707 Msa1450870:intron 40.0%
!! GATGTGTTGGGGCTTATTTT+TGG - tig0033130:12699-12718 Msa1450870:intron 40.0%
! ATTAAAGGCTAAGAGGGTAC+AGG + tig0033130:12735-12754 None:intergenic 40.0%
TTCGACAGAGTTCAAGAGAA+TGG - tig0033130:12866-12885 Msa1450870:intron 40.0%
TTTGGCAGTGAAATGAGAAG+AGG + tig0033130:12892-12911 None:intergenic 40.0%
CAGGTAAATGGAAGAGGTTA+GGG + tig0033130:13067-13086 None:intergenic 40.0%
ACAGGTAAATGGAAGAGGTT+AGG + tig0033130:13068-13087 None:intergenic 40.0%
TTCTCCTGTCTTCCTGTTAT+AGG - tig0033130:13167-13186 Msa1450870:intron 40.0%
GATACCTATAACAGGAAGAC+AGG + tig0033130:13174-13193 None:intergenic 40.0%
GGATGTGAAAATGTGCACTT+TGG + tig0033130:13765-13784 None:intergenic 40.0%
GATGAGAAGACATGTTGCAA+AGG + tig0033130:13786-13805 None:intergenic 40.0%
AGTGATGGTTACAATAGCTC+GGG + tig0033130:14063-14082 None:intergenic 40.0%
GAGTGATGGTTACAATAGCT+CGG + tig0033130:14064-14083 None:intergenic 40.0%
!! TAGGGGTTATGTTTTAGGCA+AGG - tig0033130:14135-14154 Msa1450870:intron 40.0%
TGGTATGTGTGCTCTTGATA+TGG - tig0033130:14250-14269 Msa1450870:intron 40.0%
ATTGAGGTTATCCACAACAG+AGG + tig0033130:14338-14357 None:intergenic 40.0%
TATCAGAGTAATGTGCCTTG+TGG - tig0033130:14528-14547 Msa1450870:intron 40.0%
TAAATTTAGCAGTACCCTCC+AGG - tig0033130:14693-14712 Msa1450870:intron 40.0%
GCTGCTTCTAAACTCCTTAT+GGG - tig0033130:14785-14804 Msa1450870:CDS 40.0%
GGTATAGGTGATTGGAGATT+TGG - tig0033130:14888-14907 Msa1450870:intron 40.0%
GGCATCTTAGTTTATCTCCT+AGG + tig0033130:15290-15309 None:intergenic 40.0%
GGATGCTAAATAGATAGGGA+AGG + tig0033130:15473-15492 None:intergenic 40.0%
GCATAGCAAATACCTGCAAA+TGG + tig0033130:15536-15555 None:intergenic 40.0%
! TGTCTCCTGCATACTTTTGT+TGG - tig0033130:15730-15749 Msa1450870:intron 40.0%
! AGCAACCAACAAAAGTATGC+AGG + tig0033130:15738-15757 None:intergenic 40.0%
ATATTCTGTGTGTGCACATG+GGG + tig0033130:15817-15836 None:intergenic 40.0%
GTATATTCTGTGTGTGCACA+TGG + tig0033130:15819-15838 None:intergenic 40.0%
TGCACACACAGAATATACCT+GGG - tig0033130:15821-15840 Msa1450870:CDS 40.0%
!! GGAGAATATGTTGGTCTTAC+AGG - tig0033130:16052-16071 Msa1450870:intron 40.0%
GTATGTAGCATACCGATGAA+GGG + tig0033130:16132-16151 None:intergenic 40.0%
AGTATGTAGCATACCGATGA+AGG + tig0033130:16133-16152 None:intergenic 40.0%
TACACTTCTTATGACTCGAC+TGG + tig0033130:16212-16231 None:intergenic 40.0%
!! TCAGTTTTTAAGGGGGTTCA+TGG + tig0033130:16559-16578 None:intergenic 40.0%
! GGGTTCATGGTCAGTTTTTA+AGG + tig0033130:16569-16588 None:intergenic 40.0%
ATATTGTGTGGTTGCAGTAG+TGG + tig0033130:16680-16699 None:intergenic 40.0%
ATAGCACTGCACATATTGTG+TGG + tig0033130:16692-16711 None:intergenic 40.0%
AAGGGTCAGAATGTGGTTAT+AGG + tig0033130:16724-16743 None:intergenic 40.0%
!! TGTTTGGTTCCACTTTTGGA+AGG - tig0033130:16877-16896 Msa1450870:intron 40.0%
TAAGTGTGTGTTTGGTTGTG+CGG + tig0033130:17137-17156 None:intergenic 40.0%
GATCCCAAAAATGAAGCCAT+TGG - tig0033130:17233-17252 Msa1450870:intron 40.0%
TCCCAAAAATGAAGCCATTG+GGG - tig0033130:17235-17254 Msa1450870:intron 40.0%
!! TCCCCAATGGCTTCATTTTT+GGG + tig0033130:17239-17258 None:intergenic 40.0%
! TTCCCCAATGGCTTCATTTT+TGG + tig0033130:17240-17259 None:intergenic 40.0%
! AAGGTTTAAGGTTGGATCAG+TGG + tig0033130:17515-17534 None:intergenic 40.0%
AGTTTCAATGGATCTTCCTG+TGG - tig0033130:17608-17627 Msa1450870:intron 40.0%
CCTGTGGAACTTTATTACGT+CGG - tig0033130:17624-17643 Msa1450870:intron 40.0%
CTGTGGAACTTTATTACGTC+GGG - tig0033130:17625-17644 Msa1450870:intron 40.0%
GGAAGAATCATTATGCAAGG+TGG - tig0033130:17783-17802 Msa1450870:intron 40.0%
!!! ACACTATCCTGTTTTAGGGA+AGG + tig0033130:17862-17881 None:intergenic 40.0%
GGATAGTGTTTATCACAGGT+TGG - tig0033130:17873-17892 Msa1450870:intron 40.0%
ATTTGACAGACGGTTATCCT+AGG + tig0033130:17957-17976 None:intergenic 40.0%
! TCTGTACGTTTCTGAGAACT+TGG - tig0033130:18018-18037 Msa1450870:intron 40.0%
!! CATATCACATTGGCTTAGTC+AGG - tig0033130:18088-18107 Msa1450870:intron 40.0%
! GTGTTTCTCTAGGAAAACAG+TGG - tig0033130:18173-18192 Msa1450870:intron 40.0%
!! GTCAGTTTTAACGACCACAT+AGG - tig0033130:18496-18515 Msa1450870:intron 40.0%
CTGCCTTGTCTAATCTGAAA+AGG + tig0033130:18716-18735 None:intergenic 40.0%
! CTTTTCAGATTAGACAAGGC+AGG - tig0033130:18714-18733 Msa1450870:intron 40.0%
CAATGGTTATGTCCTACTTC+AGG - tig0033130:18884-18903 Msa1450870:intron 40.0%
TAAAGACAGGAAACCAAAGG+TGG - tig0033130:18929-18948 Msa1450870:intron 40.0%
AAAGACAGGAAACCAAAGGT+GGG - tig0033130:18930-18949 Msa1450870:intron 40.0%
TAGTTATGGTTTCCCACCTT+TGG + tig0033130:18945-18964 None:intergenic 40.0%
TGGAAGGATCCCACTAATAA+AGG + tig0033130:19033-19052 None:intergenic 40.0%
TTAGTGGGATCCTTCCAAAT+TGG - tig0033130:19036-19055 Msa1450870:intron 40.0%
TTCTCTAAGCTTGATGCTGA+AGG - tig0033130:19091-19110 Msa1450870:intron 40.0%
TGCTGAAGGATGGAAAGATT+TGG - tig0033130:19105-19124 Msa1450870:CDS 40.0%
!! AGCTTTGAAATAGCATGTGG+AGG + tig0033130:19157-19176 None:intergenic 40.0%
! GTTCCATTCGTGTTTTCCTT+TGG - tig0033130:19455-19474 Msa1450870:five_prime_UTR 40.0%
TCACCAAAGGAAAACACGAA+TGG + tig0033130:19461-19480 None:intergenic 40.0%
! ATAGCAGCACCCATCCATTT+TGG - tig0033130:11516-11535 Msa1450870:three_prime_UTR 45.0%
! TAGCAGCACCCATCCATTTT+GGG - tig0033130:11517-11536 Msa1450870:three_prime_UTR 45.0%
AGGAAGGACCCAAAATGGAT+GGG + tig0033130:11528-11547 None:intergenic 45.0%
TGATCTTCATCCAGTTTGGC+GGG + tig0033130:11584-11603 None:intergenic 45.0%
CTGATCTTCATCCAGTTTGG+CGG + tig0033130:11585-11604 None:intergenic 45.0%
! GTATTGTGCAAAGGTTCTGG+TGG - tig0033130:11727-11746 Msa1450870:exon 45.0%
GGTGTATACTTGGTTGTCTC+TGG - tig0033130:12047-12066 Msa1450870:intron 45.0%
GCATAACCAAACACACGTAC+GGG - tig0033130:12418-12437 Msa1450870:intron 45.0%
AATGTTCCCGTACGTGTGTT+TGG + tig0033130:12427-12446 None:intergenic 45.0%
! AGCTTTCGTGTTTGGTTCCA+TGG - tig0033130:12448-12467 Msa1450870:intron 45.0%
! TTCGTGTTTGGTTCCATGGT+TGG - tig0033130:12452-12471 Msa1450870:intron 45.0%
! TGTTTGGTTCCATGGTTGGA+GGG - tig0033130:12456-12475 Msa1450870:intron 45.0%
GCTCAAACTTGAGTTTGCCA+TGG - tig0033130:12478-12497 Msa1450870:intron 45.0%
! TGTCAAACTACGATTGGCCA+TGG + tig0033130:12498-12517 None:intergenic 45.0%
ATGGCCAATCGTAGTTTGAC+AGG - tig0033130:12497-12516 Msa1450870:CDS 45.0%
CCCATGTGTAGCTTCCAAAA+TGG - tig0033130:12589-12608 Msa1450870:intron 45.0%
!! GCCATTTTGGAAGCTACACA+TGG + tig0033130:12593-12612 None:intergenic 45.0%
GTGTAGCTTCCAAAATGGCT+TGG - tig0033130:12594-12613 Msa1450870:intron 45.0%
ATGCACTCTTCAGTGGCATT+TGG + tig0033130:12910-12929 None:intergenic 45.0%
!! GTTAGGGTCAGTTTGGTTTG+TGG + tig0033130:13051-13070 None:intergenic 45.0%
!!! AATGGAAGGGCATTTTGTGC+TGG - tig0033130:13854-13873 Msa1450870:intron 45.0%
TCAGAGGGTGACAAATGGTT+TGG + tig0033130:14412-14431 None:intergenic 45.0%
GTTATCGGATGAAGTCATGG+CGG + tig0033130:14437-14456 None:intergenic 45.0%
GAGGTTATCGGATGAAGTCA+TGG + tig0033130:14440-14459 None:intergenic 45.0%
ACTCAATAGAGATGGACCTG+TGG + tig0033130:14498-14517 None:intergenic 45.0%
TAGCAAGGTGAATAGAGGCA+AGG + tig0033130:14571-14590 None:intergenic 45.0%
ATCGCTAGCAAGGTGAATAG+AGG + tig0033130:14576-14595 None:intergenic 45.0%
CGCTGCTTCTAAACTCCTTA+TGG - tig0033130:14784-14803 Msa1450870:CDS 45.0%
GCTTCTAAACTCCTTATGGG+AGG - tig0033130:14788-14807 Msa1450870:CDS 45.0%
CTTAATGGAATCGTCATGGG+AGG - tig0033130:15084-15103 Msa1450870:intron 45.0%
TGTACTTGTGGACCATTTGC+AGG - tig0033130:15521-15540 Msa1450870:intron 45.0%
! TAATATGAGGCGCCTACATC+AGG + tig0033130:15582-15601 None:intergenic 45.0%
TATTCTGTGTGTGCACATGG+GGG + tig0033130:15816-15835 None:intergenic 45.0%
GTGCACACACAGAATATACC+TGG - tig0033130:15820-15839 Msa1450870:CDS 45.0%
GCACACACAGAATATACCTG+GGG - tig0033130:15822-15841 Msa1450870:CDS 45.0%
CACACACAGAATATACCTGG+GGG - tig0033130:15823-15842 Msa1450870:CDS 45.0%
!! ATGTTGGTCTTACAGGTGCT+AGG - tig0033130:16059-16078 Msa1450870:intron 45.0%
TCTTATGACTCGACTGGAGT+TGG + tig0033130:16206-16225 None:intergenic 45.0%
!! TAACCAATGGTTTTCAGGCG+TGG - tig0033130:16272-16291 Msa1450870:intron 45.0%
ATTCCACGCCTGAAAACCAT+TGG + tig0033130:16278-16297 None:intergenic 45.0%
GGATACAGCTTGAATCTCCA+TGG + tig0033130:16448-16467 None:intergenic 45.0%
TTCAAGCTGTATCCAACCCA+TGG - tig0033130:16454-16473 Msa1450870:intron 45.0%
TCAAGCTGTATCCAACCCAT+GGG - tig0033130:16455-16474 Msa1450870:intron 45.0%
CCGACGTAATAAAGTTCCAC+AGG + tig0033130:17627-17646 None:intergenic 45.0%
GTTAAATTCCCTTGGGTCCT+AGG - tig0033130:17937-17956 Msa1450870:intron 45.0%
TGTGATTGCTCATTGCAGGA+TGG - tig0033130:18137-18156 Msa1450870:intron 45.0%
TGTCGGAGATGCTTTCTTCA+AGG + tig0033130:18386-18405 None:intergenic 45.0%
ATTAGACAAGGCAGGCTCTT+AGG - tig0033130:18722-18741 Msa1450870:intron 45.0%
CCTCGAAGAAATCCTTGCTA+TGG + tig0033130:18805-18824 None:intergenic 45.0%
CCATAGCAAGGATTTCTTCG+AGG - tig0033130:18802-18821 Msa1450870:intron 45.0%
! TAGCTCTACAACCCTGAAGT+AGG + tig0033130:18899-18918 None:intergenic 45.0%
CTAAGCTTGATGCTGAAGGA+TGG - tig0033130:19095-19114 Msa1450870:intron 45.0%
! AAGATTTGGAGTTCCCCAAG+AGG - tig0033130:19119-19138 Msa1450870:CDS 45.0%
GCAAGTTGTTGAACCTCTTG+GGG + tig0033130:19135-19154 None:intergenic 45.0%
GGCAAGTTGTTGAACCTCTT+GGG + tig0033130:19136-19155 None:intergenic 45.0%
AGGCAAGTTGTTGAACCTCT+TGG + tig0033130:19137-19156 None:intergenic 45.0%
!! TATTAAAATTAAAATATTAC+TGG + tig0033130:11499-11518 None:intergenic 5.0%
!! ATATTATTTAGTTATTATAA+AGG + tig0033130:15216-15235 None:intergenic 5.0%
GAGGAAGGACCCAAAATGGA+TGG + tig0033130:11529-11548 None:intergenic 50.0%
GGAAGAGGAAGGACCCAAAA+TGG + tig0033130:11533-11552 None:intergenic 50.0%
TTTGGGTCCTTCCTCTTCCT+CGG - tig0033130:11534-11553 Msa1450870:three_prime_UTR 50.0%
ATCTTCATCCAGTTTGGCGG+GGG + tig0033130:11582-11601 None:intergenic 50.0%
GATCTTCATCCAGTTTGGCG+GGG + tig0033130:11583-11602 None:intergenic 50.0%
CGCCAAACTGGATGAAGATC+AGG - tig0033130:11583-11602 Msa1450870:three_prime_UTR 50.0%
! GTGTTTGGTTCCATGGTTGG+AGG - tig0033130:12455-12474 Msa1450870:intron 50.0%
AAGTTTGAGCCCTCCAACCA+TGG + tig0033130:12468-12487 None:intergenic 50.0%
AGCCCCAACACATCTTCATG+TGG + tig0033130:12693-12712 None:intergenic 50.0%
GGAAGAGGTTAGGGTCAGTT+TGG + tig0033130:13058-13077 None:intergenic 50.0%
AGGTGTAAATCAGTCCCTCG+GGG + tig0033130:13480-13499 None:intergenic 50.0%
CAGGTGTAAATCAGTCCCTC+GGG + tig0033130:13481-13500 None:intergenic 50.0%
GCAGGTGTAAATCAGTCCCT+CGG + tig0033130:13482-13501 None:intergenic 50.0%
GCTGTTGCTAATGACGCAAG+AGG - tig0033130:13890-13909 Msa1450870:intron 50.0%
GTTGCTAATGACGCAAGAGG+AGG - tig0033130:13893-13912 Msa1450870:intron 50.0%
CAATAGAGATGGACCTGTGG+TGG + tig0033130:14495-14514 None:intergenic 50.0%
TGCCTTGTGGTAGCATGTGA+AGG - tig0033130:14541-14560 Msa1450870:intron 50.0%
TGCCTTCACATGCTACCACA+AGG + tig0033130:14546-14565 None:intergenic 50.0%
AGTCACCAGGGTAGACAGAT+GGG + tig0033130:14599-14618 None:intergenic 50.0%
AAGTCACCAGGGTAGACAGA+TGG + tig0033130:14600-14619 None:intergenic 50.0%
! TAACCTCGAGTTGCAGGCTT+GGG + tig0033130:14648-14667 None:intergenic 50.0%
! TTAACCTCGAGTTGCAGGCT+TGG + tig0033130:14649-14668 None:intergenic 50.0%
CCAATTACTTGGAGCCTGGA+GGG + tig0033130:14710-14729 None:intergenic 50.0%
CCTCCAGGCTCCAAGTAATT+GGG - tig0033130:14708-14727 Msa1450870:intron 50.0%
TGTCCCAATTACTTGGAGCC+TGG + tig0033130:14714-14733 None:intergenic 50.0%
GGCAACATACAGTAAGCCTC+AGG - tig0033130:14953-14972 Msa1450870:intron 50.0%
AATGGAATCGTCATGGGAGG+TGG - tig0033130:15087-15106 Msa1450870:intron 50.0%
TGCTATGCCCGAAACAGCTT+TGG - tig0033130:15548-15567 Msa1450870:intron 50.0%
GCTATGCCCGAAACAGCTTT+GGG - tig0033130:15549-15568 Msa1450870:intron 50.0%
ACACAGAATATACCTGGGGG+TGG - tig0033130:15826-15845 Msa1450870:intron 50.0%
AGAATATACCTGGGGGTGGA+AGG - tig0033130:15830-15849 Msa1450870:intron 50.0%
GAATATACCTGGGGGTGGAA+GGG - tig0033130:15831-15850 Msa1450870:intron 50.0%
AATATACCTGGGGGTGGAAG+GGG - tig0033130:15832-15851 Msa1450870:intron 50.0%
! TGGTCTTACAGGTGCTAGGT+TGG - tig0033130:16063-16082 Msa1450870:intron 50.0%
! CTTACAGGTGCTAGGTTGGA+TGG - tig0033130:16067-16086 Msa1450870:intron 50.0%
GGTGCAGAAATGCTTGCTTG+TGG - tig0033130:16088-16107 Msa1450870:intron 50.0%
ACATATGTAGCTCCGCCCAT+GGG + tig0033130:16473-16492 None:intergenic 50.0%
!! CAGTGCTGGCAGTGTTTGAT+TGG + tig0033130:16620-16639 None:intergenic 50.0%
GTGAAGGAAGGGTCAGAATG+TGG + tig0033130:16731-16750 None:intergenic 50.0%
AGAGCAGCCTTCCCTAAAAC+AGG - tig0033130:17852-17871 Msa1450870:intron 50.0%
ACGGTTATCCTAGGACCCAA+GGG + tig0033130:17948-17967 None:intergenic 50.0%
CTGAGAACTTGGAGCATGTC+TGG - tig0033130:18029-18048 Msa1450870:intron 50.0%
! CCTTGCTATGGTGTCCTTGT+AGG + tig0033130:18793-18812 None:intergenic 50.0%
CCTACAAGGACACCATAGCA+AGG - tig0033130:18790-18809 Msa1450870:intron 50.0%
GTGAAGACCGAGGAAGAGGA+AGG + tig0033130:11544-11563 None:intergenic 55.0%
! GTTGGTGAAGACCGAGGAAG+AGG + tig0033130:11548-11567 None:intergenic 55.0%
! ATGGTCGTTGGTGAAGACCG+AGG + tig0033130:11554-11573 None:intergenic 55.0%
TCGGTCTTCACCAACGACCA+TGG - tig0033130:11553-11572 Msa1450870:three_prime_UTR 55.0%
!!! GGAAGGGCATTTTGTGCTGG+TGG - tig0033130:13857-13876 Msa1450870:intron 55.0%
CAGCTGGTGTAGGTTGCCTA+AGG + tig0033130:14304-14323 None:intergenic 55.0%
TAGGCAACCTACACCAGCTG+CGG - tig0033130:14304-14323 Msa1450870:intron 55.0%
CGGCTCAACTACCTCTGTTG+TGG - tig0033130:14324-14343 Msa1450870:intron 55.0%
CGGCATCAGAGGGTGACAAA+TGG + tig0033130:14417-14436 None:intergenic 55.0%
GAAGTCATGGCGGCATCAGA+GGG + tig0033130:14427-14446 None:intergenic 55.0%
TGAAGTCATGGCGGCATCAG+AGG + tig0033130:14428-14447 None:intergenic 55.0%
GGGTGGCAATTTGTCGAGTG+AGG + tig0033130:14459-14478 None:intergenic 55.0%
GTGGTGGTCGGTTGGATGAA+GGG + tig0033130:14479-14498 None:intergenic 55.0%
TGTGGTGGTCGGTTGGATGA+AGG + tig0033130:14480-14499 None:intergenic 55.0%
TTCATCCAACCGACCACCAC+AGG - tig0033130:14479-14498 Msa1450870:intron 55.0%
AGAGATGGACCTGTGGTGGT+CGG + tig0033130:14491-14510 None:intergenic 55.0%
GACAGATGGGATCGCTAGCA+AGG + tig0033130:14586-14605 None:intergenic 55.0%
TTTCCCAAGCCTGCAACTCG+AGG - tig0033130:14642-14661 Msa1450870:intron 55.0%
! GGGAGTTAACCTCGAGTTGC+AGG + tig0033130:14654-14673 None:intergenic 55.0%
CCCTCCAGGCTCCAAGTAAT+TGG - tig0033130:14707-14726 Msa1450870:intron 55.0%
CCCAATTACTTGGAGCCTGG+AGG + tig0033130:14711-14730 None:intergenic 55.0%
AGCTGTATCCAACCCATGGG+CGG - tig0033130:16458-16477 Msa1450870:intron 55.0%
CACATATGTAGCTCCGCCCA+TGG + tig0033130:16474-16493 None:intergenic 55.0%
GGCGGAGCTACATATGTGTG+AGG - tig0033130:16476-16495 Msa1450870:intron 55.0%
GACGGTTATCCTAGGACCCA+AGG + tig0033130:17949-17968 None:intergenic 55.0%
TACAGAGCTCACACTGTCCC+AGG + tig0033130:18004-18023 None:intergenic 55.0%
CAAGGCAGGCTCTTAGGTGT+TGG - tig0033130:18728-18747 Msa1450870:intron 55.0%
AGTTGAGCCGCAGCTGGTGT+AGG + tig0033130:14314-14333 None:intergenic 60.0%
AGAGGTAGTTGAGCCGCAGC+TGG + tig0033130:14320-14339 None:intergenic 60.0%
GTGGTCGGTTGGATGAAGGG+TGG + tig0033130:14476-14495 None:intergenic 60.0%
ATGGACCTGTGGTGGTCGGT+TGG + tig0033130:14487-14506 None:intergenic 60.0%
GCGATCCCATCTGTCTACCC+TGG - tig0033130:14591-14610 Msa1450870:intron 60.0%
!! GGCGCTGGTGCTTCTATGCA+TGG - tig0033130:15108-15127 Msa1450870:intron 60.0%
ATGTAGCTCCGCCCATGGGT+TGG + tig0033130:16469-16488 None:intergenic 60.0%
TGAGGTTCAGCTGAACCCCC+TGG - tig0033130:16494-16513 Msa1450870:intron 60.0%
!! TTGCCAGGACTCTGGAGCAG+GGG + tig0033130:17490-17509 None:intergenic 60.0%
!! GTTGCCAGGACTCTGGAGCA+GGG + tig0033130:17491-17510 None:intergenic 60.0%
GTTGGATCAGTGGCGTTGCC+AGG + tig0033130:17505-17524 None:intergenic 60.0%
CAGTTTGGCGGGGGATGCCA+TGG + tig0033130:11573-11592 None:intergenic 65.0%
CATGGCATCCCCCGCCAAAC+TGG - tig0033130:11571-11590 Msa1450870:three_prime_UTR 65.0%
ATCGTCATGGGAGGTGGCGC+TGG - tig0033130:15093-15112 Msa1450870:intron 65.0%
ACCTGGGGGTGGAAGGGGAT+TGG - tig0033130:15837-15856 Msa1450870:intron 65.0%
AACCCCCTGCTCCAGAGTCC+TGG - tig0033130:17484-17503 Msa1450870:intron 65.0%
!! TGCCAGGACTCTGGAGCAGG+GGG + tig0033130:17489-17508 None:intergenic 65.0%
!! CGTTGCCAGGACTCTGGAGC+AGG + tig0033130:17492-17511 None:intergenic 65.0%
CAGTGGCGTTGCCAGGACTC+TGG + tig0033130:17498-17517 None:intergenic 65.0%
GCGGGGGATGCCATGGTCGT+TGG + tig0033130:11566-11585 None:intergenic 70.0%
GCCAATCCCCTTCCACCCCC+AGG + tig0033130:15841-15860 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0033130 gene 11412 19507 11412 ID=Msa1450870;Name=Msa1450870
tig0033130 mRNA 11412 19507 11412 ID=Msa1450870-mRNA-1;Parent=Msa1450870;Name=Msa1450870-mRNA-1;_AED=0.06;_eAED=0.06;_QI=160|1|1|1|1|1|14|327|382
tig0033130 exon 11412 11879 11412 ID=Msa1450870-mRNA-1:exon:17718;Parent=Msa1450870-mRNA-1
tig0033130 exon 11972 12013 11972 ID=Msa1450870-mRNA-1:exon:17717;Parent=Msa1450870-mRNA-1
tig0033130 exon 12096 12197 12096 ID=Msa1450870-mRNA-1:exon:17716;Parent=Msa1450870-mRNA-1
tig0033130 exon 12490 12588 12490 ID=Msa1450870-mRNA-1:exon:17715;Parent=Msa1450870-mRNA-1
tig0033130 exon 12704 12764 12704 ID=Msa1450870-mRNA-1:exon:17714;Parent=Msa1450870-mRNA-1
tig0033130 exon 13029 13150 13029 ID=Msa1450870-mRNA-1:exon:17713;Parent=Msa1450870-mRNA-1
tig0033130 exon 14781 14866 14781 ID=Msa1450870-mRNA-1:exon:17712;Parent=Msa1450870-mRNA-1
tig0033130 exon 15292 15376 15292 ID=Msa1450870-mRNA-1:exon:17711;Parent=Msa1450870-mRNA-1
tig0033130 exon 15761 15844 15761 ID=Msa1450870-mRNA-1:exon:17710;Parent=Msa1450870-mRNA-1
tig0033130 exon 15945 16024 15945 ID=Msa1450870-mRNA-1:exon:17709;Parent=Msa1450870-mRNA-1
tig0033130 exon 17005 17068 17005 ID=Msa1450870-mRNA-1:exon:17708;Parent=Msa1450870-mRNA-1
tig0033130 exon 17662 17730 17662 ID=Msa1450870-mRNA-1:exon:17707;Parent=Msa1450870-mRNA-1
tig0033130 exon 19099 19179 19099 ID=Msa1450870-mRNA-1:exon:17706;Parent=Msa1450870-mRNA-1
tig0033130 exon 19315 19507 19315 ID=Msa1450870-mRNA-1:exon:17705;Parent=Msa1450870-mRNA-1
tig0033130 five_prime_UTR 19348 19507 19348 ID=Msa1450870-mRNA-1:five_prime_utr;Parent=Msa1450870-mRNA-1
tig0033130 CDS 19315 19347 19315 ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1
tig0033130 CDS 19099 19179 19099 ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1
tig0033130 CDS 17662 17730 17662 ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1
tig0033130 CDS 17005 17068 17005 ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1
tig0033130 CDS 15945 16024 15945 ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1
tig0033130 CDS 15761 15844 15761 ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1
tig0033130 CDS 15292 15376 15292 ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1
tig0033130 CDS 14781 14866 14781 ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1
tig0033130 CDS 13029 13150 13029 ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1
tig0033130 CDS 12704 12764 12704 ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1
tig0033130 CDS 12490 12588 12490 ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1
tig0033130 CDS 12096 12197 12096 ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1
tig0033130 CDS 11972 12013 11972 ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1
tig0033130 CDS 11739 11879 11739 ID=Msa1450870-mRNA-1:cds;Parent=Msa1450870-mRNA-1
tig0033130 three_prime_UTR 11412 11738 11412 ID=Msa1450870-mRNA-1:three_prime_utr;Parent=Msa1450870-mRNA-1
Gene Sequence

>Msa1450870

ATGGCATCCCCCGCCAAACTGGATGAAGATCAGGTTCTGGTGGAACGTAAATCATCTGCGAGAGTTTTGACATTGAACAGGCCAAAACAATTGAATGCTCTCTCTTTTTATATGGTATCTAAGCTACTAGAAATATTTCACGATGATGAGGGAAATCCTGATGTTAAATTGATTGTCCTAAAGGGAAATGGAAGGGCATTTTGTGCTGGTGGTGATGTTGCAGCTGTTGCTAATGACGCAAGAGGAGGTGATTGGAGATTTGGTGCAATATTTTTTGATACTGAATATAAAATGAATTATTTGATGGCAACATACAGTAAGCCTCAGGTTTCAATTCTTAATGGAATCGTCATGGGAGGTGGCGCTGGTGCTTCTATGCATGGAAGATTTCGTGTCGTTACCGAGAAAACAGTATTTGCTATGCCCGAAACAGCTTTGGGATTATTTCCTGATGTAGGCGCCTCATATTATTTGTCTAGACTAGCTGGATTTTTTGGAGAATATGTTGGTCTTACAGGTGCTAGGTTGGATGGTGCAGAAATGCTTGCTTGTGGTCTTGCAACACATTTTGTCCCTTCATCGAAATTATCGTCATTGGAAGAATCATTATGCAAGGTGGAAACTAGTGATCCAGCCATAGTATCTGCAATTATTGACAAGTACTCAGAGCAGCCTTCCCTAAAACAGGATAGTGTTTATCACAGGATGGATGTAATCAATAAGTGTTTCTCTAGGAAAACAGTGGAAGATATATTATATTCTCTTGAGACTGAAGCTATGAGTAAAGCAGATAGTTGGATATCTGCAACTCTTGAAACCTTGAAGAAAGCATCTCCGACAAGCCTTAAAGTTTTTCTTAGATTGATTAGACAAGGCAGGCTCTTAGGTGTTGGTCAATGCCTTGTTTACGAGTATAGAATTGTTTGTCATATCCTACAAGGACACCATAGCAAGGATTTCTTCGAGGGTTGTAGAGCTATACTGATAGATAAAGACAGGAAACCAAAGTGGGATCCTTCCAAATTGGAGCTTGTTAAGGATAGCGATGTTGATCGTTACTTCTCTAAGCTTGATGCTGAAGGATGGAAAGATTTGGAGTTCCCCAAGAGGTTCAACAACTTGCCTCCACATGCTATTTCAAAGCTTTAA

Protein sequence

>Msa1450870

MASPAKLDEDQVLVERKSSARVLTLNRPKQLNALSFYMVSKLLEIFHDDEGNPDVKLIVLKGNGRAFCAGGDVAAVANDARGGDWRFGAIFFDTEYKMNYLMATYSKPQVSILNGIVMGGGAGASMHGRFRVVTEKTVFAMPETALGLFPDVGASYYLSRLAGFFGEYVGLTGARLDGAEMLACGLATHFVPSSKLSSLEESLCKVETSDPAIVSAIIDKYSEQPSLKQDSVYHRMDVINKCFSRKTVEDILYSLETEAMSKADSWISATLETLKKASPTSLKVFLRLIRQGRLLGVGQCLVYEYRIVCHILQGHHSKDFFEGCRAILIDKDRKPKWDPSKLELVKDSDVDRYFSKLDAEGWKDLEFPKRFNNLPPHAISKL*