Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1273460 | XP_003626947.1 | 98.013 | 151 | 3 | 0 | 1 | 151 | 1 | 151 | 2.30e-102 | 300 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1273460 | sp|Q41649|FKB15_VICFA | 92.481 | 133 | 10 | 0 | 17 | 149 | 16 | 148 | 1.09e-87 | 255 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1273460 | G7LF65 | 98.013 | 151 | 3 | 0 | 1 | 151 | 1 | 151 | 1.10e-102 | 300 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1273460 | Msa1311410 | 0.946079 | 9.134521e-105 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1273460 | MtrunA17_Chr8g0339171 | 98.013 | 151 | 3 | 0 | 1 | 151 | 1 | 151 | 2.11e-106 | 300 |
| Msa1273460 | MtrunA17_Chr7g0234801 | 58.140 | 86 | 36 | 0 | 50 | 135 | 52 | 137 | 5.55e-28 | 107 |
| Msa1273460 | MtrunA17_Chr8g0339141 | 59.302 | 86 | 35 | 0 | 50 | 135 | 58 | 143 | 6.92e-27 | 105 |
| Msa1273460 | MtrunA17_Chr8g0377771 | 58.140 | 86 | 36 | 0 | 50 | 135 | 56 | 141 | 4.95e-26 | 102 |
| Msa1273460 | MtrunA17_Chr7g0255551 | 50.000 | 86 | 43 | 0 | 50 | 135 | 39 | 124 | 9.26e-25 | 99.0 |
| Msa1273460 | MtrunA17_Chr4g0052911 | 47.525 | 101 | 42 | 2 | 46 | 135 | 137 | 237 | 4.97e-23 | 90.9 |
| Msa1273460 | MtrunA17_Chr5g0435521 | 42.718 | 103 | 52 | 2 | 53 | 148 | 35 | 137 | 2.07e-20 | 82.8 |
| Msa1273460 | MtrunA17_Chr8g0382711 | 40.000 | 110 | 55 | 2 | 46 | 144 | 104 | 213 | 6.37e-20 | 82.0 |
| Msa1273460 | MtrunA17_Chr5g0396231 | 52.632 | 95 | 38 | 4 | 46 | 137 | 409 | 499 | 1.75e-19 | 84.0 |
| Msa1273460 | MtrunA17_Chr8g0352971 | 50.575 | 87 | 41 | 2 | 51 | 135 | 18 | 104 | 1.66e-18 | 80.9 |
| Msa1273460 | MtrunA17_Chr4g0014351 | 41.573 | 89 | 52 | 0 | 50 | 138 | 781 | 869 | 3.50e-15 | 71.6 |
| Msa1273460 | MtrunA17_Chr4g0033841 | 38.000 | 100 | 58 | 2 | 50 | 145 | 130 | 229 | 3.28e-13 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1273460 | AT5G48580.1 | 74.126 | 143 | 34 | 1 | 4 | 146 | 9 | 148 | 1.47e-73 | 217 |
| Msa1273460 | AT3G25220.1 | 79.070 | 129 | 27 | 0 | 23 | 151 | 25 | 153 | 2.05e-72 | 214 |
| Msa1273460 | AT3G25230.1 | 61.628 | 86 | 33 | 0 | 50 | 135 | 57 | 142 | 2.65e-28 | 109 |
| Msa1273460 | AT3G25230.2 | 61.628 | 86 | 33 | 0 | 50 | 135 | 57 | 142 | 2.95e-28 | 108 |
| Msa1273460 | AT5G48570.1 | 58.621 | 87 | 36 | 0 | 50 | 136 | 65 | 151 | 9.33e-27 | 105 |
| Msa1273460 | AT5G45680.1 | 47.059 | 102 | 43 | 2 | 46 | 136 | 105 | 206 | 3.54e-24 | 93.6 |
| Msa1273460 | AT4G39710.1 | 43.564 | 101 | 46 | 2 | 46 | 135 | 108 | 208 | 1.08e-20 | 84.7 |
| Msa1273460 | AT4G39710.3 | 43.564 | 101 | 46 | 2 | 46 | 135 | 108 | 208 | 1.08e-20 | 84.7 |
| Msa1273460 | AT3G55520.2 | 44.762 | 105 | 51 | 2 | 53 | 150 | 35 | 139 | 1.10e-19 | 81.3 |
| Msa1273460 | AT3G55520.3 | 44.762 | 105 | 51 | 2 | 53 | 150 | 35 | 139 | 1.10e-19 | 81.3 |
| Msa1273460 | AT3G55520.1 | 44.762 | 105 | 51 | 2 | 53 | 150 | 35 | 139 | 1.10e-19 | 81.3 |
| Msa1273460 | AT4G25340.1 | 46.364 | 110 | 52 | 4 | 29 | 137 | 373 | 476 | 8.15e-19 | 82.4 |
| Msa1273460 | AT5G05420.1 | 47.312 | 93 | 46 | 3 | 46 | 137 | 52 | 142 | 1.23e-18 | 77.4 |
| Msa1273460 | AT3G12340.3 | 43.478 | 92 | 50 | 2 | 47 | 137 | 287 | 377 | 4.69e-15 | 71.2 |
| Msa1273460 | AT3G12340.2 | 43.478 | 92 | 50 | 2 | 47 | 137 | 287 | 377 | 4.69e-15 | 71.2 |
| Msa1273460 | AT3G12340.1 | 43.478 | 92 | 50 | 2 | 47 | 137 | 408 | 498 | 5.94e-15 | 71.2 |
| Msa1273460 | AT2G43560.1 | 40.449 | 89 | 49 | 2 | 50 | 134 | 124 | 212 | 3.25e-13 | 64.7 |
| Msa1273460 | AT2G43560.2 | 40.449 | 89 | 49 | 2 | 50 | 134 | 68 | 156 | 3.34e-13 | 63.9 |
| Msa1273460 | AT4G39710.2 | 47.059 | 51 | 27 | 0 | 46 | 96 | 108 | 158 | 1.36e-11 | 59.7 |
Find 45 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAGATGTATTTAATTTAT+AGG | 0.154503 | 8_3:+7184737 | None:intergenic |
| CTTGACATCAGCCTCTTTCT+TGG | 0.250787 | 8_3:+7188978 | None:intergenic |
| AGGATGGGACCAAGGATTAT+TGG | 0.270346 | 8_3:-7185780 | Msa1273460:CDS |
| TCGTAATGAAAGCATTATTA+AGG | 0.285758 | 8_3:+7184817 | None:intergenic |
| TATAGACAAATCAAAATAAA+TGG | 0.286191 | 8_3:-7184881 | Msa1273460:exon |
| ATAGATGTATTTAATTTATA+GGG | 0.318439 | 8_3:+7184738 | None:intergenic |
| TAAATGGAAGACTAGACTTT+TGG | 0.334745 | 8_3:-7184865 | Msa1273460:three_prime_UTR |
| CCACCAAGCTCAAAATCAAT+TGG | 0.361034 | 8_3:+7186999 | None:intergenic |
| TTAATTTCTTGCAATTCAAT+TGG | 0.396652 | 8_3:-7184658 | Msa1273460:three_prime_UTR |
| GGATGGGACCAAGGATTATT+GGG | 0.400650 | 8_3:-7185779 | Msa1273460:CDS |
| ACCAACATCATGTGAAGTTC+AGG | 0.407504 | 8_3:-7188067 | Msa1273460:CDS |
| GGTTCCCCACCCACTATTCC+AGG | 0.437359 | 8_3:-7185695 | Msa1273460:intron |
| GGAGTTGCAGATTGGCGTTA+AGG | 0.447428 | 8_3:-7188956 | Msa1273460:intron |
| AAAACTCGGCTACGGAGAGC+AGG | 0.460344 | 8_3:-7185717 | Msa1273460:CDS |
| ACCAAGTGTTTCTCTCTCGT+TGG | 0.463274 | 8_3:+7189284 | None:intergenic |
| TGATAAATTACCTGGAATAG+TGG | 0.463707 | 8_3:+7185685 | None:intergenic |
| GTCATTGCATCAACATTACT+AGG | 0.477757 | 8_3:-7189194 | Msa1273460:intron |
| ATATTTGACACTGAGCTTGT+GGG | 0.497294 | 8_3:-7184948 | Msa1273460:CDS |
| ATAAAGTGAAAGTACACTAT+CGG | 0.499659 | 8_3:-7188032 | Msa1273460:CDS |
| GTTAGTTTCTGCCAAGAAAG+AGG | 0.504553 | 8_3:-7188989 | Msa1273460:intron |
| CACCAAGCTCAAAATCAATT+GGG | 0.508101 | 8_3:+7187000 | None:intergenic |
| TATATTTGACACTGAGCTTG+TGG | 0.517324 | 8_3:-7184949 | Msa1273460:CDS |
| TAAAGTGAAAGTACACTATC+GGG | 0.529261 | 8_3:-7188031 | Msa1273460:intron |
| GACACATTCCCAATAATCCT+TGG | 0.533580 | 8_3:+7185771 | None:intergenic |
| GATGTCAAGGAGTTGCAGAT+TGG | 0.543834 | 8_3:-7188964 | Msa1273460:CDS |
| GCCTGAACTTCACATGATGT+TGG | 0.549979 | 8_3:+7188066 | None:intergenic |
| ATTACCTGGAATAGTGGGTG+GGG | 0.550486 | 8_3:+7185691 | None:intergenic |
| TTCTTGGCAGGATGGGACCA+AGG | 0.556888 | 8_3:-7185788 | Msa1273460:intron |
| CAAGAAAGAGGCTGATGTCA+AGG | 0.559351 | 8_3:-7188977 | Msa1273460:CDS |
| CTGAAAATACCAGCAAAACT+CGG | 0.565715 | 8_3:-7185731 | Msa1273460:CDS |
| TAATAATGCTTTCATTACGA+AGG | 0.566466 | 8_3:-7184814 | Msa1273460:three_prime_UTR |
| GATAAATTACCTGGAATAGT+GGG | 0.572820 | 8_3:+7185686 | None:intergenic |
| GGATTATTGGGAATGTGTCT+TGG | 0.579154 | 8_3:-7185767 | Msa1273460:CDS |
| AATTACCTGGAATAGTGGGT+GGG | 0.589735 | 8_3:+7185690 | None:intergenic |
| AAATTACCTGGAATAGTGGG+TGG | 0.601549 | 8_3:+7185689 | None:intergenic |
| TGTTATCTAACTCTTAAGTG+AGG | 0.609860 | 8_3:-7184788 | Msa1273460:three_prime_UTR |
| ATACCAGCAAAACTCGGCTA+CGG | 0.614446 | 8_3:-7185725 | Msa1273460:CDS |
| AGAATCGAAAACAGTTCCAT+CGG | 0.618562 | 8_3:+7187040 | None:intergenic |
| GGTGGTGGTCAAGTGATCAA+AGG | 0.629184 | 8_3:-7186981 | Msa1273460:intron |
| TTGCAGGGAAAACTCACCGA+TGG | 0.633072 | 8_3:-7187056 | Msa1273460:intron |
| AAACTCGGCTACGGAGAGCA+GGG | 0.633671 | 8_3:-7185716 | Msa1273460:CDS |
| TGTGAAGTTCAGGCACACAA+AGG | 0.672019 | 8_3:-7188057 | Msa1273460:CDS |
| ATGTTGATGCAATGACGAAG+AGG | 0.699129 | 8_3:+7189201 | None:intergenic |
| TCCAACGAGAGAGAAACACT+TGG | 0.700023 | 8_3:-7189285 | Msa1273460:five_prime_UTR |
| TGTTGATGCAATGACGAAGA+GGG | 0.728543 | 8_3:+7189202 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAAGTAATATAATATTAAA+CGG | + | chr8_3:7188553-7188572 | None:intergenic | 10.0% |
| !! | AAAAATAAATTTCTCATAAT+AGG | - | chr8_3:7188800-7188819 | Msa1273460:intron | 10.0% |
| !!! | ATAGATGTATTTAATTTATA+GGG | + | chr8_3:7189186-7189205 | None:intergenic | 10.0% |
| !!! | AATTTTTCTCAGATTAATAT+CGG | + | chr8_3:7185058-7185077 | None:intergenic | 15.0% |
| !! | AATTAACATAAATATGGAAA+TGG | + | chr8_3:7185305-7185324 | None:intergenic | 15.0% |
| !! | AAATGTTCATGAATTTAATA+AGG | - | chr8_3:7186089-7186108 | Msa1273460:intron | 15.0% |
| !!! | TTGTTTTAAAATAATTATGC+TGG | - | chr8_3:7186304-7186323 | Msa1273460:intron | 15.0% |
| !!! | TGCTCAAATTTTATTTAATT+AGG | + | chr8_3:7187236-7187255 | None:intergenic | 15.0% |
| !! | TAAGATTTCATGATAAAATA+TGG | + | chr8_3:7187743-7187762 | None:intergenic | 15.0% |
| !!! | TTAATTGTCAAAGTAATTTT+GGG | + | chr8_3:7187781-7187800 | None:intergenic | 15.0% |
| !!! | TTTAATTGTCAAAGTAATTT+TGG | + | chr8_3:7187782-7187801 | None:intergenic | 15.0% |
| !!! | TAATGTTATGGATTATTTAT+TGG | + | chr8_3:7187806-7187825 | None:intergenic | 15.0% |
| !!! | TTTGTTTTATTACAAATTTC+TGG | - | chr8_3:7188060-7188079 | Msa1273460:CDS | 15.0% |
| !! | TAATAAACAGTTAAATAACT+TGG | - | chr8_3:7188335-7188354 | Msa1273460:intron | 15.0% |
| !!! | TATACAAAATAATCTCATTT+TGG | - | chr8_3:7188747-7188766 | Msa1273460:intron | 15.0% |
| !! | TATAGACAAATCAAAATAAA+TGG | - | chr8_3:7189040-7189059 | Msa1273460:intron | 15.0% |
| !!! | GATAGATGTATTTAATTTAT+AGG | + | chr8_3:7189187-7189206 | None:intergenic | 15.0% |
| !! | ATAGAAATTGATGAATTGAA+GGG | + | chr8_3:7184871-7184890 | None:intergenic | 20.0% |
| !! | TTCTTCAACATTCAAAAAAA+GGG | + | chr8_3:7185237-7185256 | None:intergenic | 20.0% |
| !! | CACACAAATTAACATAAATA+TGG | + | chr8_3:7185311-7185330 | None:intergenic | 20.0% |
| !!! | ATTTATGTTAATTTGTGTGT+TGG | - | chr8_3:7185312-7185331 | Msa1273460:intron | 20.0% |
| !!! | TTTATGTTAATTTGTGTGTT+GGG | - | chr8_3:7185313-7185332 | Msa1273460:intron | 20.0% |
| !!! | TTTTTTTGTTGAGATTAGAA+TGG | - | chr8_3:7185681-7185700 | Msa1273460:intron | 20.0% |
| !!! | TTTTTTGTTGAGATTAGAAT+GGG | - | chr8_3:7185682-7185701 | Msa1273460:intron | 20.0% |
| !! | AATAGCTTATGCATTATTAT+TGG | + | chr8_3:7185759-7185778 | None:intergenic | 20.0% |
| !! | TAAATAACACAGTATCAAAA+TGG | + | chr8_3:7186667-7186686 | None:intergenic | 20.0% |
| !! | CAAGTCAAAATTTAATATGA+AGG | + | chr8_3:7186842-7186861 | None:intergenic | 20.0% |
| !!! | GTTTTGTTACTTTGAATTTT+TGG | - | chr8_3:7186984-7187003 | Msa1273460:CDS | 20.0% |
| !! | TAAATTTAAATCCTTCTTGA+TGG | + | chr8_3:7187403-7187422 | None:intergenic | 20.0% |
| !!! | AATTTTCTTAACATCCAAAA+GGG | + | chr8_3:7187610-7187629 | None:intergenic | 20.0% |
| !!! | AAATTTTCTTAACATCCAAA+AGG | + | chr8_3:7187611-7187630 | None:intergenic | 20.0% |
| !!! | TTTTTACATAAACTCATAAC+AGG | + | chr8_3:7188784-7188803 | None:intergenic | 20.0% |
| !!! | CATTGATAAATTTTGTTAGT+TGG | + | chr8_3:7188905-7188924 | None:intergenic | 20.0% |
| !!! | ATTTTGATTTGTCTATAGTT+CGG | + | chr8_3:7189037-7189056 | None:intergenic | 20.0% |
| !! | TTAATTTCTTGCAATTCAAT+TGG | - | chr8_3:7189263-7189282 | Msa1273460:five_prime_UTR | 20.0% |
| ! | TAGAAATTGATGAATTGAAG+GGG | + | chr8_3:7184870-7184889 | None:intergenic | 25.0% |
| ! | GATAGAAATTGATGAATTGA+AGG | + | chr8_3:7184872-7184891 | None:intergenic | 25.0% |
| !! | AAATAGACACTTTTGATCAA+AGG | + | chr8_3:7185183-7185202 | None:intergenic | 25.0% |
| !!! | TGATCAAAAGTGTCTATTTT+TGG | - | chr8_3:7185184-7185203 | Msa1273460:intron | 25.0% |
| ! | CTTCTTCAACATTCAAAAAA+AGG | + | chr8_3:7185238-7185257 | None:intergenic | 25.0% |
| ! | ATTGTTATGTAACTGATACA+TGG | - | chr8_3:7185379-7185398 | Msa1273460:intron | 25.0% |
| !! | TATGTTTTCATGACCTAATT+TGG | - | chr8_3:7185545-7185564 | Msa1273460:intron | 25.0% |
| !! | ATGTTTTCATGACCTAATTT+GGG | - | chr8_3:7185546-7185565 | Msa1273460:intron | 25.0% |
| ! | ATAAACAATGAGCAATAAAG+AGG | + | chr8_3:7185812-7185831 | None:intergenic | 25.0% |
| !! | ATAAAGTGAAAGTACACTAT+CGG | - | chr8_3:7185889-7185908 | Msa1273460:intron | 25.0% |
| ! | AAGGAACTAAAAGAAAATGA+AGG | - | chr8_3:7185994-7186013 | Msa1273460:intron | 25.0% |
| ! | AGGAACTAAAAGAAAATGAA+GGG | - | chr8_3:7185995-7186014 | Msa1273460:intron | 25.0% |
| !!! | ATGTTAGTCTTTAGAGTAAA+AGG | - | chr8_3:7186116-7186135 | Msa1273460:intron | 25.0% |
| ! | AAATTTCAAATAGACGAGAA+TGG | + | chr8_3:7186174-7186193 | None:intergenic | 25.0% |
| ! | CTCTAAATATATATGATGTG+AGG | - | chr8_3:7186202-7186221 | Msa1273460:intron | 25.0% |
| ! | ATTATATTCAGTTTCTCCAT+GGG | + | chr8_3:7186254-7186273 | None:intergenic | 25.0% |
| ! | TATTATATTCAGTTTCTCCA+TGG | + | chr8_3:7186255-7186274 | None:intergenic | 25.0% |
| ! | TATGTAGCCTTTCAAATTAA+AGG | + | chr8_3:7186335-7186354 | None:intergenic | 25.0% |
| ! | TCTCATTAAAAACTGGAATA+AGG | + | chr8_3:7186437-7186456 | None:intergenic | 25.0% |
| !! | TATTCCAGTTTTTAATGAGA+TGG | - | chr8_3:7186437-7186456 | Msa1273460:intron | 25.0% |
| !! | ATTCCAGTTTTTAATGAGAT+GGG | - | chr8_3:7186438-7186457 | Msa1273460:intron | 25.0% |
| ! | AAAATTTCTCCAAACAACAT+AGG | + | chr8_3:7186487-7186506 | None:intergenic | 25.0% |
| ! | AATTGATAGATGTCAACATA+AGG | + | chr8_3:7186699-7186718 | None:intergenic | 25.0% |
| ! | ACTGCAAAATTAAAGCTAAA+AGG | - | chr8_3:7187050-7187069 | Msa1273460:CDS | 25.0% |
| ! | AATAGCAGATCAAAATTGTA+AGG | - | chr8_3:7187691-7187710 | Msa1273460:intron | 25.0% |
| ! | AAATAATCCATAACATTACC+AGG | - | chr8_3:7187808-7187827 | Msa1273460:intron | 25.0% |
| ! | CATAAAATCTGGAGAAATAT+AGG | + | chr8_3:7187943-7187962 | None:intergenic | 25.0% |
| !!! | TTGCTATCATTTAAGTTTTC+TGG | - | chr8_3:7187966-7187985 | Msa1273460:intron | 25.0% |
| ! | GTTATACTAAACTATAGCAT+GGG | + | chr8_3:7188002-7188021 | None:intergenic | 25.0% |
| ! | AGTTATACTAAACTATAGCA+TGG | + | chr8_3:7188003-7188022 | None:intergenic | 25.0% |
| !! | ATAGTTTAGTATAACTTGCA+TGG | - | chr8_3:7188007-7188026 | Msa1273460:intron | 25.0% |
| !!! | TACAAATTTCTGGTTTATGA+CGG | - | chr8_3:7188070-7188089 | Msa1273460:CDS | 25.0% |
| !!! | CTCTTTCATATTTCAAGTTA+GGG | - | chr8_3:7188308-7188327 | Msa1273460:intron | 25.0% |
| !! | TCTTCAACTAACATTTTATG+TGG | + | chr8_3:7188495-7188514 | None:intergenic | 25.0% |
| ! | TCATTCATTGTATGACTTTA+AGG | + | chr8_3:7188687-7188706 | None:intergenic | 25.0% |
| !! | TACAATGAATGATTTGTGAT+TGG | - | chr8_3:7188695-7188714 | Msa1273460:intron | 25.0% |
| !!! | ATAATCTCATTTTGGAAATG+AGG | - | chr8_3:7188755-7188774 | Msa1273460:intron | 25.0% |
| ! | AAGCAATACAAGCTAAAAAA+TGG | + | chr8_3:7188864-7188883 | None:intergenic | 25.0% |
| !!! | TCGTAATGAAAGCATTATTA+AGG | + | chr8_3:7189107-7189126 | None:intergenic | 25.0% |
| ! | TAATAATGCTTTCATTACGA+AGG | - | chr8_3:7189107-7189126 | Msa1273460:intron | 25.0% |
| !!! | TTGGTATTTTTAAGTCGTGT+TGG | - | chr8_3:7185203-7185222 | Msa1273460:intron | 30.0% |
| ! | TTTGAATGTTGAAGAAGTAC+TGG | - | chr8_3:7185241-7185260 | Msa1273460:intron | 30.0% |
| ! | TTTTCTTCGTTCCAACAATT+GGG | + | chr8_3:7185353-7185372 | None:intergenic | 30.0% |
| CATTTCATTCCAACAAAAAG+TGG | + | chr8_3:7185409-7185428 | None:intergenic | 30.0% | |
| TTCTGTAGTTATAGTTTCCT+TGG | - | chr8_3:7185458-7185477 | Msa1273460:intron | 30.0% | |
| TCTGTAGTTATAGTTTCCTT+GGG | - | chr8_3:7185459-7185478 | Msa1273460:intron | 30.0% | |
| ! | ACTGTTCACTGATTGTTAAT+AGG | - | chr8_3:7185609-7185628 | Msa1273460:intron | 30.0% |
| ! | TAAAGTGAAAGTACACTATC+GGG | - | chr8_3:7185890-7185909 | Msa1273460:intron | 30.0% |
| GGAACTAAAAGAAAATGAAG+GGG | - | chr8_3:7185996-7186015 | Msa1273460:intron | 30.0% | |
| !!! | ATTTTGAAGTTTCCCCTATT+TGG | + | chr8_3:7186073-7186092 | None:intergenic | 30.0% |
| GTTCATGAATTTAATAAGGC+AGG | - | chr8_3:7186093-7186112 | Msa1273460:intron | 30.0% | |
| TGAGGCATACATATAAATAC+AGG | - | chr8_3:7186220-7186239 | Msa1273460:intron | 30.0% | |
| ATAGAGAACATGTTGTCAAT+GGG | + | chr8_3:7186381-7186400 | None:intergenic | 30.0% | |
| TTACCCATCTCATTAAAAAC+TGG | + | chr8_3:7186444-7186463 | None:intergenic | 30.0% | |
| AACATAGGAAATTAACCATC+AGG | + | chr8_3:7186472-7186491 | None:intergenic | 30.0% | |
| GGTTAATTTCCTATGTTGTT+TGG | - | chr8_3:7186475-7186494 | Msa1273460:intron | 30.0% | |
| ! | TATTTGTTAGGTTACTACCA+AGG | + | chr8_3:7186566-7186585 | None:intergenic | 30.0% |
| TGTGATTGTGAGTATGTTAT+AGG | + | chr8_3:7186626-7186645 | None:intergenic | 30.0% | |
| CATCTATCAATTATTTCGAG+TGG | - | chr8_3:7186707-7186726 | Msa1273460:intron | 30.0% | |
| !!! | AAATTTTGACTTGTCTTTGC+AGG | - | chr8_3:7186849-7186868 | Msa1273460:intron | 30.0% |
| !!! | AATTTTGACTTGTCTTTGCA+GGG | - | chr8_3:7186850-7186869 | Msa1273460:intron | 30.0% |
| ! | CTTAAGATTTTACTCCCTTT+TGG | - | chr8_3:7187593-7187612 | Msa1273460:intron | 30.0% |
| TTACACCATATCAATACGAA+TGG | - | chr8_3:7187629-7187648 | Msa1273460:intron | 30.0% | |
| TACACCATATCAATACGAAT+GGG | - | chr8_3:7187630-7187649 | Msa1273460:intron | 30.0% | |
| AAATGACAGACGTATCTAAT+GGG | - | chr8_3:7187874-7187893 | Msa1273460:intron | 30.0% | |
| GATAGCAAGAACATAAAATC+TGG | + | chr8_3:7187954-7187973 | None:intergenic | 30.0% | |
| !! | ACAAATTTCTGGTTTATGAC+GGG | - | chr8_3:7188071-7188090 | Msa1273460:CDS | 30.0% |
| CAATCATGTAATCATCTATC+TGG | + | chr8_3:7188104-7188123 | None:intergenic | 30.0% | |
| GATAAATTACCTGGAATAGT+GGG | + | chr8_3:7188238-7188257 | None:intergenic | 30.0% | |
| TGATAAATTACCTGGAATAG+TGG | + | chr8_3:7188239-7188258 | None:intergenic | 30.0% | |
| TATCAGCTTGATAAATTACC+TGG | + | chr8_3:7188247-7188266 | None:intergenic | 30.0% | |
| CCTAACTTGAAATATGAAAG+AGG | + | chr8_3:7188310-7188329 | None:intergenic | 30.0% | |
| !! | CCTCTTTCATATTTCAAGTT+AGG | - | chr8_3:7188307-7188326 | Msa1273460:intron | 30.0% |
| GCTAAAAAATGGAATAGTGA+TGG | + | chr8_3:7188853-7188872 | None:intergenic | 30.0% | |
| ! | AGTTGGTATGTATAAAATGC+AGG | + | chr8_3:7188888-7188907 | None:intergenic | 30.0% |
| ! | TAAATGGAAGACTAGACTTT+TGG | - | chr8_3:7189056-7189075 | Msa1273460:intron | 30.0% |
| TGTTATCTAACTCTTAAGTG+AGG | - | chr8_3:7189133-7189152 | Msa1273460:intron | 30.0% | |
| GTCATTGCATCAACATTACT+AGG | - | chr8_3:7184727-7184746 | Msa1273460:three_prime_UTR | 35.0% | |
| GTGATGTGTTATGTGAACAA+TGG | + | chr8_3:7184789-7184808 | None:intergenic | 35.0% | |
| ! | CTTTTCTTCGTTCCAACAAT+TGG | + | chr8_3:7185354-7185373 | None:intergenic | 35.0% |
| CTGTAGTTATAGTTTCCTTG+GGG | - | chr8_3:7185460-7185479 | Msa1273460:intron | 35.0% | |
| TGTAGTTATAGTTTCCTTGG+GGG | - | chr8_3:7185461-7185480 | Msa1273460:intron | 35.0% | |
| ! | ACCTAATTTGGGTTAAAGTG+CGG | - | chr8_3:7185557-7185576 | Msa1273460:intron | 35.0% |
| !! | GATGTTGGTTTATACTGCAA+TGG | + | chr8_3:7185843-7185862 | None:intergenic | 35.0% |
| CTAAAAGAAAATGAAGGGGA+AGG | - | chr8_3:7186000-7186019 | Msa1273460:intron | 35.0% | |
| !! | TACTTTAAGACCGTCCAAAT+AGG | - | chr8_3:7186056-7186075 | Msa1273460:intron | 35.0% |
| !! | ACTTTAAGACCGTCCAAATA+GGG | - | chr8_3:7186057-7186076 | Msa1273460:intron | 35.0% |
| AATGGATGAAAGGTTACAAG+AGG | + | chr8_3:7186156-7186175 | None:intergenic | 35.0% | |
| AATAGACGAGAATGGATGAA+AGG | + | chr8_3:7186166-7186185 | None:intergenic | 35.0% | |
| AGCCTTTCAAATTAAAGGAG+AGG | + | chr8_3:7186330-7186349 | None:intergenic | 35.0% | |
| CATAGAGAACATGTTGTCAA+TGG | + | chr8_3:7186382-7186401 | None:intergenic | 35.0% | |
| CATTGACAACATGTTCTCTA+TGG | - | chr8_3:7186380-7186399 | Msa1273460:intron | 35.0% | |
| CTCAATGGCTAGTATTTGTT+AGG | + | chr8_3:7186578-7186597 | None:intergenic | 35.0% | |
| AATTCCCATTGTTCTCTCAA+TGG | + | chr8_3:7186593-7186612 | None:intergenic | 35.0% | |
| TTGAGAGAACAATGGGAATT+TGG | - | chr8_3:7186593-7186612 | Msa1273460:intron | 35.0% | |
| AGAACAATGGGAATTTGGTA+AGG | - | chr8_3:7186598-7186617 | Msa1273460:intron | 35.0% | |
| CACAGTATCAAAATGGCTTT+AGG | + | chr8_3:7186660-7186679 | None:intergenic | 35.0% | |
| GATAGATGTCAACATAAGGT+AGG | + | chr8_3:7186695-7186714 | None:intergenic | 35.0% | |
| AGAATCGAAAACAGTTCCAT+CGG | + | chr8_3:7186884-7186903 | None:intergenic | 35.0% | |
| !! | AACCCAATTGATTTTGAGCT+TGG | - | chr8_3:7186919-7186938 | Msa1273460:intron | 35.0% |
| CACCAAGCTCAAAATCAATT+GGG | + | chr8_3:7186924-7186943 | None:intergenic | 35.0% | |
| ATCATTGTAGCACATGGAAA+AGG | - | chr8_3:7187134-7187153 | Msa1273460:intron | 35.0% | |
| AAGTTCTTTGAATTTCTCCC+CGG | - | chr8_3:7187177-7187196 | Msa1273460:intron | 35.0% | |
| !! | AATGGCTGATTTGTAACATG+TGG | - | chr8_3:7187208-7187227 | Msa1273460:intron | 35.0% |
| ! | GTTTTGTCTGTAGTTTCTCT+AGG | + | chr8_3:7187381-7187400 | None:intergenic | 35.0% |
| TACAGACAAAACCATCAAGA+AGG | - | chr8_3:7187389-7187408 | Msa1273460:intron | 35.0% | |
| ! | CAAGCTTTATCCCATTAAGT+GGG | - | chr8_3:7187477-7187496 | Msa1273460:intron | 35.0% |
| ! | AAGCTTTATCCCATTAAGTG+GGG | - | chr8_3:7187478-7187497 | Msa1273460:intron | 35.0% |
| ! | TAAAGCCTTTTCCAACAAAG+GGG | + | chr8_3:7187561-7187580 | None:intergenic | 35.0% |
| ! | CTAAAGCCTTTTCCAACAAA+GGG | + | chr8_3:7187562-7187581 | None:intergenic | 35.0% |
| ! | TGTTCCCATTCGTATTGATA+TGG | + | chr8_3:7187637-7187656 | None:intergenic | 35.0% |
| ATCAATACGAATGGGAACAA+TGG | - | chr8_3:7187638-7187657 | Msa1273460:intron | 35.0% | |
| AGCATACAGTTCACATTCTT+TGG | + | chr8_3:7187669-7187688 | None:intergenic | 35.0% | |
| ! | GATCAATCCTGGTAATGTTA+TGG | + | chr8_3:7187818-7187837 | None:intergenic | 35.0% |
| TGTATTTGACTGATCAATCC+TGG | + | chr8_3:7187829-7187848 | None:intergenic | 35.0% | |
| GATCAGTCAAATACAAACAC+AGG | - | chr8_3:7187834-7187853 | Msa1273460:intron | 35.0% | |
| GAAATGACAGACGTATCTAA+TGG | - | chr8_3:7187873-7187892 | Msa1273460:intron | 35.0% | |
| TAAACTATAGCATGGGTATC+TGG | + | chr8_3:7187995-7188014 | None:intergenic | 35.0% | |
| CTGAAAATACCAGCAAAACT+CGG | - | chr8_3:7188190-7188209 | Msa1273460:intron | 35.0% | |
| AATCTGGAAGTTCAGGAAAA+CGG | + | chr8_3:7188365-7188384 | None:intergenic | 35.0% | |
| GTAGAATAATCTGGAAGTTC+AGG | + | chr8_3:7188372-7188391 | None:intergenic | 35.0% | |
| TTCCAGATTATTCTACAGTC+TGG | - | chr8_3:7188376-7188395 | Msa1273460:intron | 35.0% | |
| TACCAGACTGTAGAATAATC+TGG | + | chr8_3:7188381-7188400 | None:intergenic | 35.0% | |
| CTGAATTACATTAGCAGCTT+TGG | - | chr8_3:7188444-7188463 | Msa1273460:intron | 35.0% | |
| CAACAATTGTGATTGATCGA+AGG | + | chr8_3:7188630-7188649 | None:intergenic | 35.0% | |
| TATATTTGACACTGAGCTTG+TGG | - | chr8_3:7188972-7188991 | Msa1273460:CDS | 35.0% | |
| ATATTTGACACTGAGCTTGT+GGG | - | chr8_3:7188973-7188992 | Msa1273460:CDS | 35.0% | |
| ! | GCTTTCGTGAGAATTTTCAT+TGG | - | chr8_3:7189226-7189245 | Msa1273460:CDS | 35.0% |
| TGTTGATGCAATGACGAAGA+GGG | + | chr8_3:7184722-7184741 | None:intergenic | 40.0% | |
| ATGTTGATGCAATGACGAAG+AGG | + | chr8_3:7184723-7184742 | None:intergenic | 40.0% | |
| ! | GTTAGTTTCTGCCAAGAAAG+AGG | - | chr8_3:7184932-7184951 | Msa1273460:CDS | 40.0% |
| !! | CTTTTGATCAAAGGTGTGTC+CGG | + | chr8_3:7185174-7185193 | None:intergenic | 40.0% |
| CCAACAATTGGGAATCATCA+AGG | + | chr8_3:7185342-7185361 | None:intergenic | 40.0% | |
| ! | CCTTGATGATTCCCAATTGT+TGG | - | chr8_3:7185339-7185358 | Msa1273460:intron | 40.0% |
| !!! | CATGGACATCCACTTTTTGT+TGG | - | chr8_3:7185397-7185416 | Msa1273460:intron | 40.0% |
| AATACTCTTTCTAACCCCCA+AGG | + | chr8_3:7185478-7185497 | None:intergenic | 40.0% | |
| AAATTAGCTGCATCGTAGGT+CGG | + | chr8_3:7185733-7185752 | None:intergenic | 40.0% | |
| GTGAAAATTAGCTGCATCGT+AGG | + | chr8_3:7185737-7185756 | None:intergenic | 40.0% | |
| ACCAACATCATGTGAAGTTC+AGG | - | chr8_3:7185854-7185873 | Msa1273460:intron | 40.0% | |
| AAGCTTAAGCAGTAACCTCT+AGG | - | chr8_3:7185946-7185965 | Msa1273460:intron | 40.0% | |
| AGCTTAAGCAGTAACCTCTA+GGG | - | chr8_3:7185947-7185966 | Msa1273460:intron | 40.0% | |
| TCTAGGGAATGTTTGTGAGA+GGG | - | chr8_3:7185963-7185982 | Msa1273460:intron | 40.0% | |
| !! | CTTTAAGACCGTCCAAATAG+GGG | - | chr8_3:7186058-7186077 | Msa1273460:intron | 40.0% |
| TGAAGTTTCCCCTATTTGGA+CGG | + | chr8_3:7186069-7186088 | None:intergenic | 40.0% | |
| !! | GGCCTCTCCTTTAATTTGAA+AGG | - | chr8_3:7186325-7186344 | Msa1273460:intron | 40.0% |
| ACTTACTTCTTGATCCTCCT+TGG | - | chr8_3:7186546-7186565 | Msa1273460:intron | 40.0% | |
| TTGTTAGGTTACTACCAAGG+AGG | + | chr8_3:7186563-7186582 | None:intergenic | 40.0% | |
| ACTAGCCATTGAGAGAACAA+TGG | - | chr8_3:7186585-7186604 | Msa1273460:intron | 40.0% | |
| CTAGCCATTGAGAGAACAAT+GGG | - | chr8_3:7186586-7186605 | Msa1273460:intron | 40.0% | |
| TGTTCTTGTGATGACTGATC+AGG | - | chr8_3:7186780-7186799 | Msa1273460:intron | 40.0% | |
| GTTCTTGTGATGACTGATCA+GGG | - | chr8_3:7186781-7186800 | Msa1273460:intron | 40.0% | |
| TTCTTGTGATGACTGATCAG+GGG | - | chr8_3:7186782-7186801 | Msa1273460:intron | 40.0% | |
| CCACCAAGCTCAAAATCAAT+TGG | + | chr8_3:7186925-7186944 | None:intergenic | 40.0% | |
| !! | CCAATTGATTTTGAGCTTGG+TGG | - | chr8_3:7186922-7186941 | Msa1273460:intron | 40.0% |
| !! | ATTGATTTTGAGCTTGGTGG+TGG | - | chr8_3:7186925-7186944 | Msa1273460:intron | 40.0% |
| TTCCATGTGCTACAATGATC+TGG | + | chr8_3:7187133-7187152 | None:intergenic | 40.0% | |
| !! | AATCAGCCATTTTCCTTGTC+CGG | + | chr8_3:7187199-7187218 | None:intergenic | 40.0% |
| AATTTACCCTCTCCTTACAC+AGG | + | chr8_3:7187321-7187340 | None:intergenic | 40.0% | |
| TGTGTAAGGAGAGGGTAAAT+TGG | - | chr8_3:7187320-7187339 | Msa1273460:intron | 40.0% | |
| TAAGGAGAGGGTAAATTGGA+TGG | - | chr8_3:7187324-7187343 | Msa1273460:intron | 40.0% | |
| TTGTCTGTAGTTTCTCTAGG+TGG | + | chr8_3:7187378-7187397 | None:intergenic | 40.0% | |
| TTGTTGCCTGTCTTGAATCA+TGG | + | chr8_3:7187441-7187460 | None:intergenic | 40.0% | |
| CCACTTAATGGGATAAAGCT+TGG | + | chr8_3:7187479-7187498 | None:intergenic | 40.0% | |
| ! | CCAAGCTTTATCCCATTAAG+TGG | - | chr8_3:7187476-7187495 | Msa1273460:intron | 40.0% |
| TTTATCCCATTAAGTGGGGT+CGG | - | chr8_3:7187482-7187501 | Msa1273460:intron | 40.0% | |
| ! | CGGCTAACACGATTTAAGAT+AGG | - | chr8_3:7187502-7187521 | Msa1273460:intron | 40.0% |
| CAACAAAGGGGTTGACTAAA+TGG | + | chr8_3:7187549-7187568 | None:intergenic | 40.0% | |
| CATTTAGTCAACCCCTTTGT+TGG | - | chr8_3:7187547-7187566 | Msa1273460:intron | 40.0% | |
| ! | GCTAAAGCCTTTTCCAACAA+AGG | + | chr8_3:7187563-7187582 | None:intergenic | 40.0% |
| ATGATTGTTCCTCCTCTTCT+TGG | - | chr8_3:7188117-7188136 | Msa1273460:intron | 40.0% | |
| GACACATTCCCAATAATCCT+TGG | + | chr8_3:7188153-7188172 | None:intergenic | 40.0% | |
| GGATTATTGGGAATGTGTCT+TGG | - | chr8_3:7188154-7188173 | Msa1273460:intron | 40.0% | |
| !! | AATTACCTGGAATAGTGGGT+GGG | + | chr8_3:7188234-7188253 | None:intergenic | 40.0% |
| ! | AAATTACCTGGAATAGTGGG+TGG | + | chr8_3:7188235-7188254 | None:intergenic | 40.0% |
| ATCTGGAAGTTCAGGAAAAC+GGG | + | chr8_3:7188364-7188383 | None:intergenic | 40.0% | |
| !!! | GCAGCTTTGGTTTTGATTGT+TGG | - | chr8_3:7188457-7188476 | Msa1273460:intron | 40.0% |
| !!! | TGGTTTTGATTGTTGGCTCT+AGG | - | chr8_3:7188464-7188483 | Msa1273460:intron | 40.0% |
| TCCAACGAGAGAGAAACACT+TGG | - | chr8_3:7184636-7184655 | Msa1273460:three_prime_UTR | 45.0% | |
| ACCAAGTGTTTCTCTCTCGT+TGG | + | chr8_3:7184640-7184659 | None:intergenic | 45.0% | |
| CTTGACATCAGCCTCTTTCT+TGG | + | chr8_3:7184946-7184965 | None:intergenic | 45.0% | |
| CAAGAAAGAGGCTGATGTCA+AGG | - | chr8_3:7184944-7184963 | Msa1273460:CDS | 45.0% | |
| GATGTCAAGGAGTTGCAGAT+TGG | - | chr8_3:7184957-7184976 | Msa1273460:CDS | 45.0% | |
| GTCAATGTTGTCTCAGACAC+CGG | - | chr8_3:7185152-7185171 | Msa1273460:intron | 45.0% | |
| GCCGCACTTTAACCCAAATT+AGG | + | chr8_3:7185561-7185580 | None:intergenic | 45.0% | |
| ATCTTGTGACCTTGCTAGCA+AGG | + | chr8_3:7185589-7185608 | None:intergenic | 45.0% | |
| AATTAGCTGCATCGTAGGTC+GGG | + | chr8_3:7185732-7185751 | None:intergenic | 45.0% | |
| GCCTGAACTTCACATGATGT+TGG | + | chr8_3:7185858-7185877 | None:intergenic | 45.0% | |
| TGTGAAGTTCAGGCACACAA+AGG | - | chr8_3:7185864-7185883 | Msa1273460:intron | 45.0% | |
| CTCTCACAAACATTCCCTAG+AGG | + | chr8_3:7185964-7185983 | None:intergenic | 45.0% | |
| ! | CTCTAGGGAATGTTTGTGAG+AGG | - | chr8_3:7185962-7185981 | Msa1273460:intron | 45.0% |
| CTAGGGAATGTTTGTGAGAG+GGG | - | chr8_3:7185964-7185983 | Msa1273460:intron | 45.0% | |
| GGAAGGAAAGAGAAGAGGAT+GGG | - | chr8_3:7186017-7186036 | Msa1273460:intron | 45.0% | |
| AATACAGGCACAACATCCCA+TGG | - | chr8_3:7186235-7186254 | Msa1273460:intron | 45.0% | |
| GTGGTCAGCTAAATGCTTTG+AGG | - | chr8_3:7186726-7186745 | Msa1273460:intron | 45.0% | |
| CGTTGAACTAGCTGTTGTGT+TGG | - | chr8_3:7187016-7187035 | Msa1273460:CDS | 45.0% | |
| TGCCAGATCATTGTAGCACA+TGG | - | chr8_3:7187128-7187147 | Msa1273460:intron | 45.0% | |
| TTTGAATTTCTCCCCGGACA+AGG | - | chr8_3:7187183-7187202 | Msa1273460:intron | 45.0% | |
| !! | ATCAGCCATTTTCCTTGTCC+GGG | + | chr8_3:7187198-7187217 | None:intergenic | 45.0% |
| GCTTAGTAGAAGCCTGTGTA+AGG | - | chr8_3:7187306-7187325 | Msa1273460:intron | 45.0% | |
| TAGAAGCCTGTGTAAGGAGA+GGG | - | chr8_3:7187312-7187331 | Msa1273460:intron | 45.0% | |
| GAGAGGGTAAATTGGATGGA+GGG | - | chr8_3:7187328-7187347 | Msa1273460:intron | 45.0% | |
| GTCAACCCCTTTGTTGGAAA+AGG | - | chr8_3:7187553-7187572 | Msa1273460:intron | 45.0% | |
| TGACAGACGTATCTAATGGG+AGG | - | chr8_3:7187877-7187896 | Msa1273460:intron | 45.0% | |
| ACTATAGCATGGGTATCTGG+CGG | + | chr8_3:7187992-7188011 | None:intergenic | 45.0% | |
| AGGATGGGACCAAGGATTAT+TGG | - | chr8_3:7188141-7188160 | Msa1273460:intron | 45.0% | |
| GGATGGGACCAAGGATTATT+GGG | - | chr8_3:7188142-7188161 | Msa1273460:intron | 45.0% | |
| ATACCAGCAAAACTCGGCTA+CGG | - | chr8_3:7188196-7188215 | Msa1273460:intron | 45.0% | |
| !! | ATTACCTGGAATAGTGGGTG+GGG | + | chr8_3:7188233-7188252 | None:intergenic | 45.0% |
| GGAGTTGCAGATTGGCGTTA+AGG | - | chr8_3:7184965-7184984 | Msa1273460:CDS | 50.0% | |
| CGGCAAAAACCTTGCTAGCA+AGG | - | chr8_3:7185577-7185596 | Msa1273460:intron | 50.0% | |
| GGAATGTTTGTGAGAGGGGA+AGG | - | chr8_3:7185968-7185987 | Msa1273460:intron | 50.0% | |
| TTGTGAGAGGGGAAGGATCA+AGG | - | chr8_3:7185975-7185994 | Msa1273460:intron | 50.0% | |
| GAAGGGGAAGGAAAGAGAAG+AGG | - | chr8_3:7186012-7186031 | Msa1273460:intron | 50.0% | |
| GGGAAGGAAAGAGAAGAGGA+TGG | - | chr8_3:7186016-7186035 | Msa1273460:intron | 50.0% | |
| AGATGGGTAATGTCGCCTGA+TGG | - | chr8_3:7186454-7186473 | Msa1273460:intron | 50.0% | |
| TTGCAGGGAAAACTCACCGA+TGG | - | chr8_3:7186865-7186884 | Msa1273460:intron | 50.0% | |
| ! | GGTGGTGGTCAAGTGATCAA+AGG | - | chr8_3:7186940-7186959 | Msa1273460:intron | 50.0% |
| TTCTCCCCGGACAAGGAAAA+TGG | - | chr8_3:7187190-7187209 | Msa1273460:intron | 50.0% | |
| !! | TCAGCCATTTTCCTTGTCCG+GGG | + | chr8_3:7187197-7187216 | None:intergenic | 50.0% |
| GTAGAAGCCTGTGTAAGGAG+AGG | - | chr8_3:7187311-7187330 | Msa1273460:intron | 50.0% | |
| GGAGAGGGTAAATTGGATGG+AGG | - | chr8_3:7187327-7187346 | Msa1273460:intron | 50.0% | |
| CACCTGCCATGATTCAAGAC+AGG | - | chr8_3:7187432-7187451 | Msa1273460:intron | 50.0% | |
| TGCCTGTCTTGAATCATGGC+AGG | + | chr8_3:7187437-7187456 | None:intergenic | 50.0% | |
| GTTAGCCGACCCCACTTAAT+GGG | + | chr8_3:7187490-7187509 | None:intergenic | 50.0% | |
| TGTTAGCCGACCCCACTTAA+TGG | + | chr8_3:7187491-7187510 | None:intergenic | 50.0% | |
| TTGTTCCTCCTCTTCTTGGC+AGG | - | chr8_3:7188121-7188140 | Msa1273460:intron | 50.0% | |
| ! | TGACACTGAGTTGAACCTGC+AGG | - | chr8_3:7188937-7188956 | Msa1273460:intron | 50.0% |
| TCCTCCTCTTCTTGGCAGGA+TGG | - | chr8_3:7188125-7188144 | Msa1273460:intron | 55.0% | |
| CCTCCTCTTCTTGGCAGGAT+GGG | - | chr8_3:7188126-7188145 | Msa1273460:intron | 55.0% | |
| TTCTTGGCAGGATGGGACCA+AGG | - | chr8_3:7188133-7188152 | Msa1273460:intron | 55.0% | |
| ! | TCTCCGTAGCCGAGTTTTGC+TGG | + | chr8_3:7188202-7188221 | None:intergenic | 55.0% |
| AAAACTCGGCTACGGAGAGC+AGG | - | chr8_3:7188204-7188223 | Msa1273460:intron | 55.0% | |
| AAACTCGGCTACGGAGAGCA+GGG | - | chr8_3:7188205-7188224 | Msa1273460:intron | 55.0% | |
| ! | CACTGAGTTGAACCTGCAGG+CGG | - | chr8_3:7188940-7188959 | Msa1273460:intron | 55.0% |
| ! | ATAAGTGTTGCACCGCCTGC+AGG | + | chr8_3:7188955-7188974 | None:intergenic | 55.0% |
| CCCATCCTGCCAAGAAGAGG+AGG | + | chr8_3:7188129-7188148 | None:intergenic | 60.0% | |
| GGTCCCATCCTGCCAAGAAG+AGG | + | chr8_3:7188132-7188151 | None:intergenic | 60.0% | |
| GGTTCCCCACCCACTATTCC+AGG | - | chr8_3:7188226-7188245 | Msa1273460:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 7184635 | 7189308 | 7184635 | ID=Msa1273460;Name=Msa1273460 |
| chr8_3 | mRNA | 7184635 | 7189308 | 7184635 | ID=Msa1273460-mRNA-1;Parent=Msa1273460;Name=Msa1273460-mRNA-1;_AED=0.01;_eAED=0.01;_QI=53|1|1|1|1|1|6|264|151 |
| chr8_3 | exon | 7184635 | 7184984 | 7184635 | ID=Msa1273460-mRNA-1:exon:2787;Parent=Msa1273460-mRNA-1 |
| chr8_3 | exon | 7185696 | 7185800 | 7185696 | ID=Msa1273460-mRNA-1:exon:2786;Parent=Msa1273460-mRNA-1 |
| chr8_3 | exon | 7186982 | 7187072 | 7186982 | ID=Msa1273460-mRNA-1:exon:2785;Parent=Msa1273460-mRNA-1 |
| chr8_3 | exon | 7188032 | 7188094 | 7188032 | ID=Msa1273460-mRNA-1:exon:2784;Parent=Msa1273460-mRNA-1 |
| chr8_3 | exon | 7188957 | 7189006 | 7188957 | ID=Msa1273460-mRNA-1:exon:2783;Parent=Msa1273460-mRNA-1 |
| chr8_3 | exon | 7189195 | 7189308 | 7189195 | ID=Msa1273460-mRNA-1:exon:2782;Parent=Msa1273460-mRNA-1 |
| chr8_3 | five_prime_UTR | 7189256 | 7189308 | 7189256 | ID=Msa1273460-mRNA-1:five_prime_utr;Parent=Msa1273460-mRNA-1 |
| chr8_3 | CDS | 7189195 | 7189255 | 7189195 | ID=Msa1273460-mRNA-1:cds;Parent=Msa1273460-mRNA-1 |
| chr8_3 | CDS | 7188957 | 7189006 | 7188957 | ID=Msa1273460-mRNA-1:cds;Parent=Msa1273460-mRNA-1 |
| chr8_3 | CDS | 7188032 | 7188094 | 7188032 | ID=Msa1273460-mRNA-1:cds;Parent=Msa1273460-mRNA-1 |
| chr8_3 | CDS | 7186982 | 7187072 | 7186982 | ID=Msa1273460-mRNA-1:cds;Parent=Msa1273460-mRNA-1 |
| chr8_3 | CDS | 7185696 | 7185800 | 7185696 | ID=Msa1273460-mRNA-1:cds;Parent=Msa1273460-mRNA-1 |
| chr8_3 | CDS | 7184899 | 7184984 | 7184899 | ID=Msa1273460-mRNA-1:cds;Parent=Msa1273460-mRNA-1 |
| chr8_3 | three_prime_UTR | 7184635 | 7184898 | 7184635 | ID=Msa1273460-mRNA-1:three_prime_utr;Parent=Msa1273460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
