AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1278170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1278170 MtrunA17_Chr8g0347801 92.411 593 3 2 1 593 1 551 0.0 1095
Msa1278170 MtrunA17_Chr4g0046761 61.224 147 54 2 163 309 39 182 1.69e-48 167
Msa1278170 MtrunA17_Chr4g0046771 74.194 62 16 0 441 502 28 89 1.18e-27 106
Msa1278170 MtrunA17_Chr4g0046781 69.643 56 17 0 513 568 1 56 3.41e-22 92.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1278170 AT3G61600.1 74.161 596 102 6 5 593 7 557 0.0 883
Msa1278170 AT3G61600.2 74.161 596 102 6 5 593 7 557 0.0 883
Msa1278170 AT2G46260.1 73.534 597 104 8 5 593 6 556 0.0 866
Msa1278170 AT4G01160.2 55.113 577 197 10 24 592 4 526 0.0 578
Msa1278170 AT4G01160.1 54.861 576 178 9 24 592 4 504 0.0 576

Find 185 sgRNAs with CRISPR-Local

Find 680 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATTTCCAACCTTATCTT+AGG 0.136082 8_3:-14231638 Msa1278170:five_prime_UTR
GTTCTGTCAATGTCTTCTTT+TGG 0.195530 8_3:-14228022 Msa1278170:three_prime_UTR
GATTGTCTTTACTTCATTAA+TGG 0.228738 8_3:-14228175 Msa1278170:CDS
TTGCTCAAGCCGTCGTTTCT+TGG 0.231242 8_3:-14228593 Msa1278170:CDS
CCAGCAGTGTGTAGTATATT+TGG 0.271055 8_3:-14228518 Msa1278170:CDS
CAAAGTTCTTTCCATTGCTT+TGG 0.271545 8_3:-14228382 Msa1278170:CDS
TAAAAGCCCTTTCTTCTATA+AGG 0.278375 8_3:-14229976 Msa1278170:intron
ATGATAGTAATTTCTCTGAT+AGG 0.288454 8_3:-14231465 Msa1278170:CDS
TAAGACAGCACCTGGTTTGC+TGG 0.309622 8_3:-14229645 Msa1278170:CDS
TGAAGCAACTTCAAATTTAT+CGG 0.325451 8_3:+14229607 None:intergenic
GATTCCATGGACTTCGTTCA+TGG 0.328777 8_3:-14228203 Msa1278170:CDS
TCTAGCTCCGACGCCGATTT+CGG 0.333073 8_3:-14231499 Msa1278170:CDS
CCGGCCAGACGGGAACAAAT+TGG 0.356600 8_3:+14228474 None:intergenic
GATTATGCATGGAGTTATCT+AGG 0.356665 8_3:-14227821 Msa1278170:three_prime_UTR
TGTCGCACATGTGCATAATA+TGG 0.364448 8_3:-14227731 Msa1278170:three_prime_UTR
TTAAGACCTTCTTAAGCTTT+CGG 0.371733 8_3:+14228725 None:intergenic
CATGTATATGACCAGGTTCC+AGG 0.374160 8_3:-14228941 Msa1278170:intron
CCATTCAAAATCTGCTCATC+TGG 0.375584 8_3:+14230687 None:intergenic
TTGTACCTCTATTGCTGATT+GGG 0.388063 8_3:-14231386 Msa1278170:CDS
TCGGATTCCATCACCGTAAC+CGG 0.388093 8_3:+14231538 None:intergenic
TGCTTTGCCGCATCAGTTAG+TGG 0.388482 8_3:+14229476 None:intergenic
GCTGCCATCTAGTGTCTTAA+TGG 0.391173 8_3:-14229513 Msa1278170:CDS
GTCTGGCCGGGTTTATTCTC+AGG 0.392633 8_3:-14228461 Msa1278170:CDS
AAAGTTCTTTCCATTGCTTT+GGG 0.394503 8_3:-14228381 Msa1278170:CDS
CCAATTTGTTCCCGTCTGGC+CGG 0.395141 8_3:-14228474 Msa1278170:CDS
CAATTTGTTCCCGTCTGGCC+GGG 0.395259 8_3:-14228473 Msa1278170:CDS
CTGCAAAAGAACCAACTTGT+AGG 0.404407 8_3:+14227765 None:intergenic
AGCTTTCGGCAGGTCATATG+AGG 0.407830 8_3:+14228739 None:intergenic
ATTGTACCTCTATTGCTGAT+TGG 0.409104 8_3:-14231387 Msa1278170:CDS
TGTTCCAATTTGTTCCCGTC+TGG 0.416143 8_3:-14228478 Msa1278170:CDS
GAATCAGGTTGAGGATCAAC+TGG 0.418846 8_3:+14231415 None:intergenic
TATCTTCCAGATTGCCGTAC+TGG 0.419089 8_3:+14228806 None:intergenic
TTATTCTCAGGCATTTCACT+TGG 0.423250 8_3:-14228449 Msa1278170:CDS
TTATGTCCTTCATTGCCCTT+GGG 0.426489 8_3:+14227687 None:intergenic
ATGGTTGAAGAATCCCCTTC+TGG 0.431713 8_3:-14230603 Msa1278170:intron
ACCCTCAGAATTAATGCTTC+TGG 0.431935 8_3:-14229822 Msa1278170:intron
CACTGTGGACTATGAATTTG+CGG 0.433172 8_3:-14228320 Msa1278170:CDS
ATGAAATCGAAAGGATAGTT+AGG 0.433980 8_3:-14227863 Msa1278170:three_prime_UTR
AGGTAAAGCAATGCAGATTC+AGG 0.434966 8_3:+14229539 None:intergenic
ATTATGTCCTTCATTGCCCT+TGG 0.435473 8_3:+14227686 None:intergenic
CGATCTGTTTGATCCGGTTA+CGG 0.437284 8_3:-14231551 Msa1278170:CDS
ACATATCAGTTCTCCGATCT+TGG 0.439435 8_3:-14230003 Msa1278170:CDS
CAATTTCCAACCTTATCTTA+GGG 0.441947 8_3:-14231637 Msa1278170:five_prime_UTR
TTAATGGCGTTCTGCACCTA+AGG 0.448670 8_3:-14228159 Msa1278170:CDS
TGATGGTGAGCTCGGCCCTT+AGG 0.450312 8_3:+14228143 None:intergenic
TGAATCTGCATTGCTTTACC+TGG 0.451325 8_3:-14229537 Msa1278170:CDS
TGATAGTAATTTCTCTGATA+GGG 0.451951 8_3:-14231464 Msa1278170:CDS
GAATTCCGATCTGTTTGATC+CGG 0.452265 8_3:-14231557 Msa1278170:CDS
AGAACCACCGTGAGCCCATT+CGG 0.453849 8_3:+14231519 None:intergenic
TTCGAATGGGATGAGGGAAT+CGG 0.454577 8_3:-14229859 Msa1278170:CDS
TCAAATTCAACCACCTTGAC+AGG 0.458404 8_3:+14228550 None:intergenic
AGTACGGCAATCTGGAAGAT+AGG 0.459958 8_3:-14228804 Msa1278170:CDS
ATGGACTTCGTTCATGGCTG+AGG 0.461086 8_3:-14228197 Msa1278170:CDS
GTTTGATCCGGTTACGGTGA+TGG 0.462190 8_3:-14231545 Msa1278170:CDS
TGGTCTACCTTATAGAAGAA+AGG 0.465498 8_3:+14229969 None:intergenic
TCAGCCATTAAGACACTAGA+TGG 0.468273 8_3:+14229509 None:intergenic
ATTGAAAGCAAATCCGAAAT+CGG 0.472219 8_3:+14231486 None:intergenic
AACATGCCCAAGGGCAATGA+AGG 0.472386 8_3:-14227693 None:intergenic
GAAACTTGTTTGCGATTCCA+TGG 0.474206 8_3:-14228216 Msa1278170:CDS
TTTGTTTCAATATATGTTTG+AGG 0.475005 8_3:+14231723 None:intergenic
GAGTAATCCATGCCCAGGTT+GGG 0.476612 8_3:+14230056 None:intergenic
TAGACACCAGTACGGCAATC+TGG 0.477520 8_3:-14228812 Msa1278170:CDS
GCATTTCACTTGGGTGGACA+AGG 0.479220 8_3:-14228439 Msa1278170:CDS
TTGTGTGGCTTCTGAAAATC+AGG 0.481870 8_3:-14230643 Msa1278170:CDS
TATTGCCTCTACTCCGGCTA+GGG 0.485070 8_3:+14228900 None:intergenic
GGTCTACCTTATAGAAGAAA+GGG 0.488837 8_3:+14229970 None:intergenic
GAGAATAAACCCGGCCAGAC+GGG 0.491594 8_3:+14228464 None:intergenic
TTTATGACTTTGTGCTGAAG+TGG 0.491647 8_3:-14228837 Msa1278170:CDS
TTGCTGATTGGGCGAGGCAT+CGG 0.492519 8_3:-14231375 Msa1278170:CDS
TCCACATCGCCAACGGTCAC+TGG 0.493627 8_3:-14228632 Msa1278170:CDS
TGACAATGATGAACCCAACC+TGG 0.493819 8_3:-14230069 Msa1278170:CDS
GCTTGGTTATATCCTTGTAT+CGG 0.494386 8_3:+14229441 None:intergenic
ATTGGGCGAGGCATCGGAAG+AGG 0.494867 8_3:-14231369 Msa1278170:CDS
TACAGAAGAAGCTGCTCTCA+TGG 0.502881 8_3:-14229705 Msa1278170:intron
TTCATCCAAGCTTGTCCTTG+AGG 0.503077 8_3:-14228677 Msa1278170:CDS
CTATCTAGACAATGTGCACT+AGG 0.503311 8_3:-14227899 Msa1278170:three_prime_UTR
TTTATTATCTAGATTATGCA+TGG 0.505033 8_3:-14227832 Msa1278170:three_prime_UTR
CAGCATCTTCTGATGCAACC+TGG 0.506247 8_3:+14228860 None:intergenic
TTACAGAACAGTATTAGAAA+AGG 0.506404 8_3:+14227950 None:intergenic
CCTCGCCCAATCAGCAATAG+AGG 0.508375 8_3:+14231381 None:intergenic
TAGAGCCTCAAGGACAAGCT+TGG 0.509349 8_3:+14228672 None:intergenic
GAAGATATCAAGAAAGAAAA+CGG 0.509506 8_3:-14231340 Msa1278170:intron
TTGCTAACAAACTCCTCTGT+TGG 0.513889 8_3:+14228286 None:intergenic
AGAGTAATCCATGCCCAGGT+TGG 0.514979 8_3:+14230055 None:intergenic
GTTGGAAATTGAAACGAAGT+GGG 0.517470 8_3:+14231649 None:intergenic
ATCAAAACATCCAGCAAACC+AGG 0.518936 8_3:+14229635 None:intergenic
GCCACACAATCATCCATGTC+AGG 0.519496 8_3:+14230657 None:intergenic
GACCTTCTTAAGCTTTCGGC+AGG 0.520979 8_3:+14228729 None:intergenic
CTTCAGCTGCCAGTGACCGT+TGG 0.521484 8_3:+14228623 None:intergenic
TACCAGAAGCATTAATTCTG+AGG 0.521501 8_3:+14229820 None:intergenic
AATTAGAGAGACAGAGAAGA+GGG 0.522736 8_3:+14231603 None:intergenic
ATTATCTAGTGATGATCTCC+AGG 0.523124 8_3:-14228878 Msa1278170:CDS
TTCACAGGTGGCAAGGCTGT+TGG 0.524034 8_3:-14228244 Msa1278170:CDS
TAATCTAGATAATAAAATCA+TGG 0.524817 8_3:+14227839 None:intergenic
GTTATGAACTTGCCCCTAGC+CGG 0.525529 8_3:-14228913 Msa1278170:CDS
CCTCTATTGCTGATTGGGCG+AGG 0.527454 8_3:-14231381 Msa1278170:CDS
GAAGATAGGCGAGAAGTCCT+AGG 0.528020 8_3:-14228790 Msa1278170:CDS
TACGGTGATGGAATCCGAAT+GGG 0.528236 8_3:-14231533 Msa1278170:CDS
AGATCGGAGAACTGATATGT+AGG 0.529172 8_3:+14230006 None:intergenic
TACTGTTGCATGAAATCGAA+AGG 0.530813 8_3:-14227872 Msa1278170:three_prime_UTR
AGACACTAGATGGCAGCTCC+AGG 0.539810 8_3:+14229519 None:intergenic
ATCGTGCAAGCCGCGAGCCT+AGG 0.541327 8_3:+14228773 None:intergenic
TCTCAGGCATTTCACTTGGG+TGG 0.543562 8_3:-14228445 Msa1278170:CDS
ATATTGCCTCTACTCCGGCT+AGG 0.544346 8_3:+14228899 None:intergenic
GGTTGGAAATTGAAACGAAG+TGG 0.547949 8_3:+14231648 None:intergenic
AAGCCGTCGTTTCTTGGAGA+GGG 0.549467 8_3:-14228587 Msa1278170:CDS
TGATGAACCCAACCTGGGCA+TGG 0.549556 8_3:-14230063 Msa1278170:CDS
TATTCTCAGGCATTTCACTT+GGG 0.551671 8_3:-14228448 Msa1278170:CDS
GTATCTTGCTAGCCGATACA+AGG 0.552442 8_3:-14229453 Msa1278170:CDS
GCAAGTTCATAACCTCGTCC+TGG 0.553916 8_3:+14228923 None:intergenic
AAAAGAACCAACTTGTAGGC+TGG 0.554311 8_3:+14227769 None:intergenic
ACCAGAAGCATTAATTCTGA+GGG 0.556125 8_3:+14229821 None:intergenic
TTATGACTTTGTGCTGAAGT+GGG 0.557998 8_3:-14228836 Msa1278170:CDS
TTGAGCATTAAGACAGCACC+TGG 0.559659 8_3:-14229653 Msa1278170:CDS
ATCATGTTCAAAGTCACTAC+AGG 0.559974 8_3:+14228702 None:intergenic
AAAGGCAATTACACATTCAC+AGG 0.562583 8_3:-14228259 Msa1278170:CDS
GGAGGAAGAAGTTGTTGCAA+TGG 0.563065 8_3:-14230622 Msa1278170:CDS
GATCGGAGAACTGATATGTA+GGG 0.564273 8_3:+14230007 None:intergenic
CACAATCATCCATGTCAGGT+TGG 0.565888 8_3:+14230661 None:intergenic
AGATAATATTGCCTCTACTC+CGG 0.566343 8_3:+14228894 None:intergenic
TATGACCAGGTTCCAGGACG+AGG 0.568225 8_3:-14228935 Msa1278170:intron
TATACTACACACTGCTGGCG+TGG 0.568228 8_3:+14228523 None:intergenic
GAATGGGAACCAACCTGACA+TGG 0.568779 8_3:-14230670 Msa1278170:CDS
CAAGCCGTCGTTTCTTGGAG+AGG 0.569802 8_3:-14228588 Msa1278170:CDS
AAACGACGGCTTGAGCAAGC+AGG 0.570754 8_3:+14228598 None:intergenic
TCAGCCATGAACGAAGTCCA+TGG 0.573234 8_3:+14228199 None:intergenic
AGTATATTTGGATCTAAAGC+GGG 0.573614 8_3:-14228506 Msa1278170:CDS
GAGAGACAGAGAAGAGGGAA+CGG 0.578263 8_3:+14231608 None:intergenic
CATGCATGAGATATTGTAGT+CGG 0.582698 8_3:-14229586 Msa1278170:CDS
CATTTCACTTGGGTGGACAA+GGG 0.583090 8_3:-14228438 Msa1278170:CDS
CTTGCCCCTAGCCGGAGTAG+AGG 0.585158 8_3:-14228905 Msa1278170:CDS
GTTCAGAGTAATCCATGCCC+AGG 0.587746 8_3:+14230051 None:intergenic
AAATTAGAGAGACAGAGAAG+AGG 0.587856 8_3:+14231602 None:intergenic
CCAAATATACTACACACTGC+TGG 0.588348 8_3:+14228518 None:intergenic
GGCAGGTCATATGAGGGAAG+CGG 0.590638 8_3:+14228746 None:intergenic
TCTGTCAGCACATTGTAACA+TGG 0.590755 8_3:-14228410 Msa1278170:CDS
GATGAGGCTGTAAATGACTT+AGG 0.595768 8_3:-14230179 Msa1278170:CDS
GATGAGGCTGTAAATGACTT+AGG 0.595768 8_3:-14230203 Msa1278170:CDS
TTACACATTCACAGGTGGCA+AGG 0.596424 8_3:-14228251 Msa1278170:CDS
GCCAGTGACCGTTGGCGATG+TGG 0.596471 8_3:+14228631 None:intergenic
GACCTGCCGAAAGCTTAAGA+AGG 0.596935 8_3:-14228731 Msa1278170:CDS
CAACTGATAAGAATATATGT+AGG 0.597285 8_3:-14231774 None:intergenic
TGAGAATAAACCCGGCCAGA+CGG 0.599156 8_3:+14228463 None:intergenic
TCACTGTCTGATGGTGAGCT+CGG 0.599457 8_3:+14228135 None:intergenic
ATGGAATCCGAATGGGCTCA+CGG 0.599542 8_3:-14231526 Msa1278170:CDS
AATTAAGATAATACCAGAAG+GGG 0.600741 8_3:+14230590 None:intergenic
TAACACAACAATATCACAGA+AGG 0.600827 8_3:+14227978 None:intergenic
AGCAAATCCGAAATCGGCGT+CGG 0.603564 8_3:+14231492 None:intergenic
GACAATGATGAACCCAACCT+GGG 0.609287 8_3:-14230068 Msa1278170:CDS
CAATTAAGATAATACCAGAA+GGG 0.610310 8_3:+14230589 None:intergenic
ATATTGAACACTACTACAGA+AGG 0.611638 8_3:+14227922 None:intergenic
TTTGTGACCAGCCTACAAGT+TGG 0.615162 8_3:-14227776 Msa1278170:three_prime_UTR
GAAATGCCTGAGAATAAACC+CGG 0.615264 8_3:+14228455 None:intergenic
GCATGTGTGTCACTGTCTGA+TGG 0.616189 8_3:+14228126 None:intergenic
GATTGAACAAAACATGCCCA+AGG 0.617218 8_3:-14227703 Msa1278170:three_prime_UTR
TAATGGCGTTCTGCACCTAA+GGG 0.617222 8_3:-14228158 Msa1278170:CDS
TAGTATATTTGGATCTAAAG+CGG 0.623586 8_3:-14228507 Msa1278170:CDS
TTACGGTGATGGAATCCGAA+TGG 0.628209 8_3:-14231534 Msa1278170:CDS
ATACAAATATCGTCCTGTCA+AGG 0.628696 8_3:-14228563 Msa1278170:CDS
AGGTTGAGGATCAACTGGAT+CGG 0.629008 8_3:+14231420 None:intergenic
ACCTGACATGGATGATTGTG+TGG 0.633757 8_3:-14230658 Msa1278170:CDS
ATTGCCTCTACTCCGGCTAG+GGG 0.635190 8_3:+14228901 None:intergenic
CAGAGGTTCCACATCGCCAA+CGG 0.635240 8_3:-14228639 Msa1278170:CDS
GAACAATATTACAACAGATG+AGG 0.641060 8_3:+14228041 None:intergenic
GGCAATTACACATTCACAGG+TGG 0.644944 8_3:-14228256 Msa1278170:CDS
TGTAAATGACTTAGGTGATG+AGG 0.647837 8_3:-14230171 Msa1278170:CDS
TGTAAATGACTTAGGTGATG+AGG 0.647837 8_3:-14230195 Msa1278170:CDS
GCTTTCGGCAGGTCATATGA+GGG 0.650096 8_3:+14228740 None:intergenic
GGCAAGGTCAAGACCAACAG+AGG 0.655375 8_3:-14228299 Msa1278170:CDS
CAAATATCGTCCTGTCAAGG+TGG 0.658225 8_3:-14228560 Msa1278170:CDS
GAGTTTGTTAGCAAATACAA+AGG 0.660955 8_3:-14228277 Msa1278170:CDS
ATCAGACAGTGACACACATG+CGG 0.661177 8_3:-14228124 Msa1278170:exon
TGGACTATGAATTTGCGGCA+AGG 0.662962 8_3:-14228315 Msa1278170:CDS
AAATGTTAACCTAGGTGATG+AGG 0.670184 8_3:-14230219 Msa1278170:intron
ATATTTGGATCTAAAGCGGG+AGG 0.670761 8_3:-14228503 Msa1278170:CDS
AAATGTTAACATAGGTGATG+AGG 0.675883 8_3:-14230099 Msa1278170:CDS
AAGTGGGCTAGACACCAGTA+CGG 0.677973 8_3:-14228820 Msa1278170:CDS
ATTGAACAAAACATGCCCAA+GGG 0.679908 8_3:-14227702 Msa1278170:three_prime_UTR
GGCGAGAAGTCCTAGGCTCG+CGG 0.680972 8_3:-14228783 Msa1278170:CDS
CGTAACCGGATCAAACAGAT+CGG 0.681842 8_3:+14231552 None:intergenic
ATGCCCTCTCCAAGAAACGA+CGG 0.688090 8_3:+14228584 None:intergenic
TGTGGCTTCTGAAAATCAGG+AGG 0.690006 8_3:-14230640 Msa1278170:CDS
AGTTCAACCACTAACTGATG+CGG 0.693530 8_3:-14229483 Msa1278170:CDS
GGGATCAGTGAGCTTCACTG+TGG 0.699432 8_3:-14228335 Msa1278170:CDS
GAATCCGAATGGGCTCACGG+TGG 0.791791 8_3:-14231523 Msa1278170:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTGTTTATTTATTGT+GGG - chr8_3:14228298-14228317 Msa1278170:CDS 10.0%
!! AAAAATTGTTTATTTATTGT+GGG - chr8_3:14228298-14228317 Msa1278170:CDS 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr8_3:14230215-14230234 Msa1278170:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr8_3:14230215-14230234 Msa1278170:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr8_3:14230215-14230234 Msa1278170:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr8_3:14230215-14230234 Msa1278170:intron 100.0%
!!! ACAAATTTTTGTTATTACAA+CGG - chr8_3:14227757-14227776 Msa1278170:three_prime_UTR 15.0%
!!! AATTTATTTTTCATTCATGA+AGG - chr8_3:14227878-14227897 Msa1278170:three_prime_UTR 15.0%
!!! TTTCATTTTTGTTGAATAAT+TGG - chr8_3:14228162-14228181 Msa1278170:CDS 15.0%
!!! AATAATTGGATTTTTTGTTA+TGG - chr8_3:14228176-14228195 Msa1278170:CDS 15.0%
!!! ATAATTGGATTTTTTGTTAT+GGG - chr8_3:14228177-14228196 Msa1278170:CDS 15.0%
!!! AAAATTGATTTTTTTAATGC+TGG - chr8_3:14228217-14228236 Msa1278170:CDS 15.0%
!!! AAATTGATTTTTTTAATGCT+GGG - chr8_3:14228218-14228237 Msa1278170:CDS 15.0%
!!! AAAATTGAAATTTTTGTTGA+TGG - chr8_3:14228258-14228277 Msa1278170:CDS 15.0%
!!! AAATTGAAATTTTTGTTGAT+GGG - chr8_3:14228259-14228278 Msa1278170:CDS 15.0%
!! GAAAAATTGTTTATTTATTG+TGG - chr8_3:14228297-14228316 Msa1278170:CDS 15.0%
!! TAATCTAGATAATAAAATCA+TGG + chr8_3:14231626-14231645 None:intergenic 15.0%
!!! ACAAATTTTTGTTATTACAA+CGG - chr8_3:14227757-14227776 Msa1278170:three_prime_UTR 15.0%
!!! AATTTATTTTTCATTCATGA+AGG - chr8_3:14227878-14227897 Msa1278170:three_prime_UTR 15.0%
!!! TTTCATTTTTGTTGAATAAT+TGG - chr8_3:14228162-14228181 Msa1278170:CDS 15.0%
!!! AATAATTGGATTTTTTGTTA+TGG - chr8_3:14228176-14228195 Msa1278170:CDS 15.0%
!!! ATAATTGGATTTTTTGTTAT+GGG - chr8_3:14228177-14228196 Msa1278170:CDS 15.0%
!!! AAAATTGATTTTTTTAATGC+TGG - chr8_3:14228217-14228236 Msa1278170:CDS 15.0%
!!! AAATTGATTTTTTTAATGCT+GGG - chr8_3:14228218-14228237 Msa1278170:CDS 15.0%
!!! AAAATTGAAATTTTTGTTGA+TGG - chr8_3:14228258-14228277 Msa1278170:CDS 15.0%
!!! AAATTGAAATTTTTGTTGAT+GGG - chr8_3:14228259-14228278 Msa1278170:CDS 15.0%
!! GAAAAATTGTTTATTTATTG+TGG - chr8_3:14228297-14228316 Msa1278170:CDS 15.0%
!! TAATCTAGATAATAAAATCA+TGG + chr8_3:14231626-14231645 None:intergenic 15.0%
!! TTTGTTTCAATATATGTTTG+AGG + chr8_3:14227742-14227761 None:intergenic 20.0%
!! TAATTATGGGTTTATTTGTT+AGG - chr8_3:14228352-14228371 Msa1278170:CDS 20.0%
!!! AATTATGGGTTTATTTGTTA+GGG - chr8_3:14228353-14228372 Msa1278170:CDS 20.0%
!!! TTAGATTTGTAGATGTTTTT+AGG - chr8_3:14228415-14228434 Msa1278170:CDS 20.0%
!! TCACTATTTGAAGAAAAAAT+TGG - chr8_3:14228449-14228468 Msa1278170:CDS 20.0%
!! TATTTGAAGAAAAAATTGGT+TGG - chr8_3:14228453-14228472 Msa1278170:CDS 20.0%
!! TCCAAATGTAAATATAAATC+TGG - chr8_3:14228521-14228540 Msa1278170:CDS 20.0%
!! CCAAATGTAAATATAAATCT+GGG - chr8_3:14228522-14228541 Msa1278170:CDS 20.0%
!! CAAATGTAAATATAAATCTG+GGG - chr8_3:14228523-14228542 Msa1278170:CDS 20.0%
!! TATATGAGTTATTACTTGTT+AGG - chr8_3:14228901-14228920 Msa1278170:CDS 20.0%
!! CATGAAATATATAAACAAAG+GGG + chr8_3:14228961-14228980 None:intergenic 20.0%
!! GCATGAAATATATAAACAAA+GGG + chr8_3:14228962-14228981 None:intergenic 20.0%
!!! GATTTTGAAAATGTTAACAT+AGG - chr8_3:14229355-14229374 Msa1278170:intron 20.0%
!!! TTTCTTTTGTAGTTTTTCAT+TGG - chr8_3:14230456-14230475 Msa1278170:intron 20.0%
!! GCAATAAAAAGATTACAAAT+TGG + chr8_3:14231367-14231386 None:intergenic 20.0%
!! TTTATTATCTAGATTATGCA+TGG - chr8_3:14231630-14231649 Msa1278170:five_prime_UTR 20.0%
!! TTTGTTTCAATATATGTTTG+AGG + chr8_3:14227742-14227761 None:intergenic 20.0%
!! TAATTATGGGTTTATTTGTT+AGG - chr8_3:14228352-14228371 Msa1278170:CDS 20.0%
!!! AATTATGGGTTTATTTGTTA+GGG - chr8_3:14228353-14228372 Msa1278170:CDS 20.0%
!!! TTAGATTTGTAGATGTTTTT+AGG - chr8_3:14228415-14228434 Msa1278170:CDS 20.0%
!! TCACTATTTGAAGAAAAAAT+TGG - chr8_3:14228449-14228468 Msa1278170:CDS 20.0%
!! TATTTGAAGAAAAAATTGGT+TGG - chr8_3:14228453-14228472 Msa1278170:CDS 20.0%
!! TCCAAATGTAAATATAAATC+TGG - chr8_3:14228521-14228540 Msa1278170:CDS 20.0%
!! CCAAATGTAAATATAAATCT+GGG - chr8_3:14228522-14228541 Msa1278170:CDS 20.0%
!! CAAATGTAAATATAAATCTG+GGG - chr8_3:14228523-14228542 Msa1278170:CDS 20.0%
!! TATATGAGTTATTACTTGTT+AGG - chr8_3:14228901-14228920 Msa1278170:CDS 20.0%
!! CATGAAATATATAAACAAAG+GGG + chr8_3:14228961-14228980 None:intergenic 20.0%
!! GCATGAAATATATAAACAAA+GGG + chr8_3:14228962-14228981 None:intergenic 20.0%
!!! GATTTTGAAAATGTTAACAT+AGG - chr8_3:14229355-14229374 Msa1278170:intron 20.0%
!!! TTTCTTTTGTAGTTTTTCAT+TGG - chr8_3:14230456-14230475 Msa1278170:intron 20.0%
!! GCAATAAAAAGATTACAAAT+TGG + chr8_3:14231367-14231386 None:intergenic 20.0%
!! TTTATTATCTAGATTATGCA+TGG - chr8_3:14231630-14231649 Msa1278170:five_prime_UTR 20.0%
! ATGATAGTAATTTCTCTGAT+AGG - chr8_3:14227997-14228016 Msa1278170:three_prime_UTR 25.0%
! TGATAGTAATTTCTCTGATA+GGG - chr8_3:14227998-14228017 Msa1278170:three_prime_UTR 25.0%
! GAAGATATCAAGAAAGAAAA+CGG - chr8_3:14228122-14228141 Msa1278170:exon 25.0%
! AACAAAAATGAAAACCTAGA+TGG + chr8_3:14228155-14228174 None:intergenic 25.0%
! ATTGTTTATTTATTGTGGGT+TGG - chr8_3:14228302-14228321 Msa1278170:CDS 25.0%
! TTCAGTGATGAAATGAAAAT+AGG - chr8_3:14228387-14228406 Msa1278170:CDS 25.0%
!! TTGTGTATGTTTTCTGTTAA+TGG - chr8_3:14228492-14228511 Msa1278170:CDS 25.0%
!! TGTGTATGTTTTCTGTTAAT+GGG - chr8_3:14228493-14228512 Msa1278170:CDS 25.0%
! CCCAGATTTATATTTACATT+TGG + chr8_3:14228525-14228544 None:intergenic 25.0%
! AATTTGAAAGTGATTGTTAC+TGG - chr8_3:14228585-14228604 Msa1278170:CDS 25.0%
! ATTTGAAAGTGATTGTTACT+GGG - chr8_3:14228586-14228605 Msa1278170:CDS 25.0%
!!! AAAAAGCTTGGTTCTTTTAA+TGG - chr8_3:14228623-14228642 Msa1278170:CDS 25.0%
!!! TGTGATATTTTTGTGTATGT+TGG - chr8_3:14228664-14228683 Msa1278170:CDS 25.0%
! AATTAAGATAATACCAGAAG+GGG + chr8_3:14228875-14228894 None:intergenic 25.0%
! CAATTAAGATAATACCAGAA+GGG + chr8_3:14228876-14228895 None:intergenic 25.0%
! GGCATGAAATATATAAACAA+AGG + chr8_3:14228963-14228982 None:intergenic 25.0%
! AAATGGAAGATACAAACAAA+GGG + chr8_3:14228985-14229004 None:intergenic 25.0%
!!! AGTAAGTTCTTGTTTTATAG+TGG - chr8_3:14229016-14229035 Msa1278170:intron 25.0%
!!! GTAAGTTCTTGTTTTATAGT+GGG - chr8_3:14229017-14229036 Msa1278170:intron 25.0%
!!! TAAGTTCTTGTTTTATAGTG+GGG - chr8_3:14229018-14229037 Msa1278170:intron 25.0%
! GCTATCAATATATGAAATGA+GGG - chr8_3:14229090-14229109 Msa1278170:intron 25.0%
!! AATGAGGGTATAATTTACTA+AGG - chr8_3:14229105-14229124 Msa1278170:intron 25.0%
!!! GATTTTGAAAATGTTAACCT+AGG - chr8_3:14229235-14229254 Msa1278170:intron 25.0%
! ATATAAAGATACAGAGAAGT+TGG + chr8_3:14229516-14229535 None:intergenic 25.0%
!! CTGCTAAGAAAACATATTTT+TGG + chr8_3:14229558-14229577 None:intergenic 25.0%
! TGAGGGCAAATAAAATAATA+AGG + chr8_3:14229700-14229719 None:intergenic 25.0%
! TGAAGCAACTTCAAATTTAT+CGG + chr8_3:14229858-14229877 None:intergenic 25.0%
! TAAAAAAACAAACACTTGCT+TGG + chr8_3:14230041-14230060 None:intergenic 25.0%
! AGAACTTCTTAAAAGAGAAA+AGG + chr8_3:14230149-14230168 None:intergenic 25.0%
! TATACACATTTCTCTATTGT+TGG - chr8_3:14230346-14230365 Msa1278170:intron 25.0%
! ATGGAAAGTTAGAATCAATA+AGG + chr8_3:14230417-14230436 None:intergenic 25.0%
!!! CATGTGTTTTTTCTAAAGAA+TGG + chr8_3:14230436-14230455 None:intergenic 25.0%
! TAGTATATTTGGATCTAAAG+CGG - chr8_3:14230955-14230974 Msa1278170:intron 25.0%
! GATTGTCTTTACTTCATTAA+TGG - chr8_3:14231287-14231306 Msa1278170:intron 25.0%
!! TGTAATCTTTTTATTGCAGT+TGG - chr8_3:14231370-14231389 Msa1278170:CDS 25.0%
! TTACAGAACAGTATTAGAAA+AGG + chr8_3:14231515-14231534 None:intergenic 25.0%
! ATGATAGTAATTTCTCTGAT+AGG - chr8_3:14227997-14228016 Msa1278170:three_prime_UTR 25.0%
! TGATAGTAATTTCTCTGATA+GGG - chr8_3:14227998-14228017 Msa1278170:three_prime_UTR 25.0%
! GAAGATATCAAGAAAGAAAA+CGG - chr8_3:14228122-14228141 Msa1278170:exon 25.0%
! AACAAAAATGAAAACCTAGA+TGG + chr8_3:14228155-14228174 None:intergenic 25.0%
! ATTGTTTATTTATTGTGGGT+TGG - chr8_3:14228302-14228321 Msa1278170:CDS 25.0%
! TTCAGTGATGAAATGAAAAT+AGG - chr8_3:14228387-14228406 Msa1278170:CDS 25.0%
!! TTGTGTATGTTTTCTGTTAA+TGG - chr8_3:14228492-14228511 Msa1278170:CDS 25.0%
!! TGTGTATGTTTTCTGTTAAT+GGG - chr8_3:14228493-14228512 Msa1278170:CDS 25.0%
! CCCAGATTTATATTTACATT+TGG + chr8_3:14228525-14228544 None:intergenic 25.0%
! AATTTGAAAGTGATTGTTAC+TGG - chr8_3:14228585-14228604 Msa1278170:CDS 25.0%
! ATTTGAAAGTGATTGTTACT+GGG - chr8_3:14228586-14228605 Msa1278170:CDS 25.0%
!!! AAAAAGCTTGGTTCTTTTAA+TGG - chr8_3:14228623-14228642 Msa1278170:CDS 25.0%
!!! TGTGATATTTTTGTGTATGT+TGG - chr8_3:14228664-14228683 Msa1278170:CDS 25.0%
! AATTAAGATAATACCAGAAG+GGG + chr8_3:14228875-14228894 None:intergenic 25.0%
! CAATTAAGATAATACCAGAA+GGG + chr8_3:14228876-14228895 None:intergenic 25.0%
! GGCATGAAATATATAAACAA+AGG + chr8_3:14228963-14228982 None:intergenic 25.0%
! AAATGGAAGATACAAACAAA+GGG + chr8_3:14228985-14229004 None:intergenic 25.0%
!!! AGTAAGTTCTTGTTTTATAG+TGG - chr8_3:14229016-14229035 Msa1278170:intron 25.0%
!!! GTAAGTTCTTGTTTTATAGT+GGG - chr8_3:14229017-14229036 Msa1278170:intron 25.0%
!!! TAAGTTCTTGTTTTATAGTG+GGG - chr8_3:14229018-14229037 Msa1278170:intron 25.0%
! GCTATCAATATATGAAATGA+GGG - chr8_3:14229090-14229109 Msa1278170:intron 25.0%
!! AATGAGGGTATAATTTACTA+AGG - chr8_3:14229105-14229124 Msa1278170:intron 25.0%
!!! GATTTTGAAAATGTTAACCT+AGG - chr8_3:14229235-14229254 Msa1278170:intron 25.0%
! ATATAAAGATACAGAGAAGT+TGG + chr8_3:14229516-14229535 None:intergenic 25.0%
!! CTGCTAAGAAAACATATTTT+TGG + chr8_3:14229558-14229577 None:intergenic 25.0%
! TGAGGGCAAATAAAATAATA+AGG + chr8_3:14229700-14229719 None:intergenic 25.0%
! TGAAGCAACTTCAAATTTAT+CGG + chr8_3:14229858-14229877 None:intergenic 25.0%
! TAAAAAAACAAACACTTGCT+TGG + chr8_3:14230041-14230060 None:intergenic 25.0%
! AGAACTTCTTAAAAGAGAAA+AGG + chr8_3:14230149-14230168 None:intergenic 25.0%
! TATACACATTTCTCTATTGT+TGG - chr8_3:14230346-14230365 Msa1278170:intron 25.0%
! ATGGAAAGTTAGAATCAATA+AGG + chr8_3:14230417-14230436 None:intergenic 25.0%
!!! CATGTGTTTTTTCTAAAGAA+TGG + chr8_3:14230436-14230455 None:intergenic 25.0%
! TAGTATATTTGGATCTAAAG+CGG - chr8_3:14230955-14230974 Msa1278170:intron 25.0%
! GATTGTCTTTACTTCATTAA+TGG - chr8_3:14231287-14231306 Msa1278170:intron 25.0%
!! TGTAATCTTTTTATTGCAGT+TGG - chr8_3:14231370-14231389 Msa1278170:CDS 25.0%
! TTACAGAACAGTATTAGAAA+AGG + chr8_3:14231515-14231534 None:intergenic 25.0%
TCAATTTCCAACCTTATCTT+AGG - chr8_3:14227824-14227843 Msa1278170:three_prime_UTR 30.0%
CAATTTCCAACCTTATCTTA+GGG - chr8_3:14227825-14227844 Msa1278170:three_prime_UTR 30.0%
AAAAAACCCTAAGATAAGGT+TGG + chr8_3:14227834-14227853 None:intergenic 30.0%
ATTGAAAGCAAATCCGAAAT+CGG + chr8_3:14227979-14227998 None:intergenic 30.0%
! ATTTCTCTGATAGGGTTTTA+AGG - chr8_3:14228006-14228025 Msa1278170:three_prime_UTR 30.0%
!!! GGTTTTAAGGATTGAAATCA+TGG - chr8_3:14228019-14228038 Msa1278170:three_prime_UTR 30.0%
! AAAACGGTATTTTTCCATCT+AGG - chr8_3:14228138-14228157 Msa1278170:CDS 30.0%
!!! TGATTTTTTTAATGCTGGGT+TGG - chr8_3:14228222-14228241 Msa1278170:CDS 30.0%
! GTTTATTTGTTAGGGTTTCT+AGG - chr8_3:14228361-14228380 Msa1278170:CDS 30.0%
GTGATGAAATGAAAATAGGT+TGG - chr8_3:14228391-14228410 Msa1278170:CDS 30.0%
TGAAGAAAAAATTGGTTGGA+AGG - chr8_3:14228457-14228476 Msa1278170:CDS 30.0%
GAAGAAAAAATTGGTTGGAA+GGG - chr8_3:14228458-14228477 Msa1278170:CDS 30.0%
!!! CAAGCTTTTTTCTGTAACTT+TGG + chr8_3:14228613-14228632 None:intergenic 30.0%
CAAAGTTACAGAAAAAAGCT+TGG - chr8_3:14228611-14228630 Msa1278170:CDS 30.0%
ATGTTGGATAATGTTTGTGT+TGG - chr8_3:14228680-14228699 Msa1278170:CDS 30.0%
CGTTGTAACCTGATATTATA+TGG - chr8_3:14228727-14228746 Msa1278170:CDS 30.0%
ACAGAAGACCATATAATATC+AGG + chr8_3:14228738-14228757 None:intergenic 30.0%
GCAATTAAGATAATACCAGA+AGG + chr8_3:14228877-14228896 None:intergenic 30.0%
ATATAAACAAAGGGGCAATA+GGG + chr8_3:14228953-14228972 None:intergenic 30.0%
TATATAAACAAAGGGGCAAT+AGG + chr8_3:14228954-14228973 None:intergenic 30.0%
AATGGAAGATACAAACAAAG+GGG + chr8_3:14228984-14229003 None:intergenic 30.0%
GAAATGGAAGATACAAACAA+AGG + chr8_3:14228986-14229005 None:intergenic 30.0%
CGCTATCAATATATGAAATG+AGG - chr8_3:14229089-14229108 Msa1278170:intron 30.0%
AAATGTTAACATAGGTGATG+AGG - chr8_3:14229363-14229382 Msa1278170:intron 30.0%
TAAAAGCCCTTTCTTCTATA+AGG - chr8_3:14229486-14229505 Msa1278170:CDS 30.0%
!!! TTTTGCAGCTTTTTTCGAAT+GGG - chr8_3:14229590-14229609 Msa1278170:CDS 30.0%
! AAAAGAAGTATAGCACGTTT+AGG + chr8_3:14229731-14229750 None:intergenic 30.0%
!! TTCTTTCTATTGACTTGTCA+GGG - chr8_3:14230165-14230184 Msa1278170:CDS 30.0%
TATACATCATGTATATGACC+AGG - chr8_3:14230514-14230533 Msa1278170:intron 30.0%
TTAAGACCTTCTTAAGCTTT+CGG + chr8_3:14230740-14230759 None:intergenic 30.0%
! AGTATATTTGGATCTAAAGC+GGG - chr8_3:14230956-14230975 Msa1278170:intron 30.0%
AAAGTTCTTTCCATTGCTTT+GGG - chr8_3:14231081-14231100 Msa1278170:intron 30.0%
!! GAGTTTGTTAGCAAATACAA+AGG - chr8_3:14231185-14231204 Msa1278170:intron 30.0%
GAACAATATTACAACAGATG+AGG + chr8_3:14231424-14231443 None:intergenic 30.0%
! TTCTGTCAATGTCTTCTTTT+GGG - chr8_3:14231441-14231460 Msa1278170:CDS 30.0%
TAACACAACAATATCACAGA+AGG + chr8_3:14231487-14231506 None:intergenic 30.0%
ATATTGAACACTACTACAGA+AGG + chr8_3:14231543-14231562 None:intergenic 30.0%
ATGAAATCGAAAGGATAGTT+AGG - chr8_3:14231599-14231618 Msa1278170:five_prime_UTR 30.0%
CAAAAATAGAAGACAAGTTC+AGG + chr8_3:14231670-14231689 None:intergenic 30.0%
TCAATTTCCAACCTTATCTT+AGG - chr8_3:14227824-14227843 Msa1278170:three_prime_UTR 30.0%
CAATTTCCAACCTTATCTTA+GGG - chr8_3:14227825-14227844 Msa1278170:three_prime_UTR 30.0%
AAAAAACCCTAAGATAAGGT+TGG + chr8_3:14227834-14227853 None:intergenic 30.0%
ATTGAAAGCAAATCCGAAAT+CGG + chr8_3:14227979-14227998 None:intergenic 30.0%
! ATTTCTCTGATAGGGTTTTA+AGG - chr8_3:14228006-14228025 Msa1278170:three_prime_UTR 30.0%
!!! GGTTTTAAGGATTGAAATCA+TGG - chr8_3:14228019-14228038 Msa1278170:three_prime_UTR 30.0%
! AAAACGGTATTTTTCCATCT+AGG - chr8_3:14228138-14228157 Msa1278170:CDS 30.0%
!!! TGATTTTTTTAATGCTGGGT+TGG - chr8_3:14228222-14228241 Msa1278170:CDS 30.0%
! GTTTATTTGTTAGGGTTTCT+AGG - chr8_3:14228361-14228380 Msa1278170:CDS 30.0%
GTGATGAAATGAAAATAGGT+TGG - chr8_3:14228391-14228410 Msa1278170:CDS 30.0%
TGAAGAAAAAATTGGTTGGA+AGG - chr8_3:14228457-14228476 Msa1278170:CDS 30.0%
GAAGAAAAAATTGGTTGGAA+GGG - chr8_3:14228458-14228477 Msa1278170:CDS 30.0%
!!! CAAGCTTTTTTCTGTAACTT+TGG + chr8_3:14228613-14228632 None:intergenic 30.0%
CAAAGTTACAGAAAAAAGCT+TGG - chr8_3:14228611-14228630 Msa1278170:CDS 30.0%
ATGTTGGATAATGTTTGTGT+TGG - chr8_3:14228680-14228699 Msa1278170:CDS 30.0%
CGTTGTAACCTGATATTATA+TGG - chr8_3:14228727-14228746 Msa1278170:CDS 30.0%
ACAGAAGACCATATAATATC+AGG + chr8_3:14228738-14228757 None:intergenic 30.0%
GCAATTAAGATAATACCAGA+AGG + chr8_3:14228877-14228896 None:intergenic 30.0%
ATATAAACAAAGGGGCAATA+GGG + chr8_3:14228953-14228972 None:intergenic 30.0%
TATATAAACAAAGGGGCAAT+AGG + chr8_3:14228954-14228973 None:intergenic 30.0%
AATGGAAGATACAAACAAAG+GGG + chr8_3:14228984-14229003 None:intergenic 30.0%
GAAATGGAAGATACAAACAA+AGG + chr8_3:14228986-14229005 None:intergenic 30.0%
CGCTATCAATATATGAAATG+AGG - chr8_3:14229089-14229108 Msa1278170:intron 30.0%
AAATGTTAACATAGGTGATG+AGG - chr8_3:14229363-14229382 Msa1278170:intron 30.0%
TAAAAGCCCTTTCTTCTATA+AGG - chr8_3:14229486-14229505 Msa1278170:CDS 30.0%
!!! TTTTGCAGCTTTTTTCGAAT+GGG - chr8_3:14229590-14229609 Msa1278170:CDS 30.0%
! AAAAGAAGTATAGCACGTTT+AGG + chr8_3:14229731-14229750 None:intergenic 30.0%
!! TTCTTTCTATTGACTTGTCA+GGG - chr8_3:14230165-14230184 Msa1278170:CDS 30.0%
TATACATCATGTATATGACC+AGG - chr8_3:14230514-14230533 Msa1278170:intron 30.0%
TTAAGACCTTCTTAAGCTTT+CGG + chr8_3:14230740-14230759 None:intergenic 30.0%
! AGTATATTTGGATCTAAAGC+GGG - chr8_3:14230956-14230975 Msa1278170:intron 30.0%
AAAGTTCTTTCCATTGCTTT+GGG - chr8_3:14231081-14231100 Msa1278170:intron 30.0%
!! GAGTTTGTTAGCAAATACAA+AGG - chr8_3:14231185-14231204 Msa1278170:intron 30.0%
GAACAATATTACAACAGATG+AGG + chr8_3:14231424-14231443 None:intergenic 30.0%
! TTCTGTCAATGTCTTCTTTT+GGG - chr8_3:14231441-14231460 Msa1278170:CDS 30.0%
TAACACAACAATATCACAGA+AGG + chr8_3:14231487-14231506 None:intergenic 30.0%
ATATTGAACACTACTACAGA+AGG + chr8_3:14231543-14231562 None:intergenic 30.0%
ATGAAATCGAAAGGATAGTT+AGG - chr8_3:14231599-14231618 Msa1278170:five_prime_UTR 30.0%
CAAAAATAGAAGACAAGTTC+AGG + chr8_3:14231670-14231689 None:intergenic 30.0%
GTTGGAAATTGAAACGAAGT+GGG + chr8_3:14227816-14227835 None:intergenic 35.0%
ACGGAAAAAACCCTAAGATA+AGG + chr8_3:14227838-14227857 None:intergenic 35.0%
AATTAGAGAGACAGAGAAGA+GGG + chr8_3:14227862-14227881 None:intergenic 35.0%
AAATTAGAGAGACAGAGAAG+AGG + chr8_3:14227863-14227882 None:intergenic 35.0%
!! CAATTTTCAGAATCAGGTTG+AGG + chr8_3:14228059-14228078 None:intergenic 35.0%
! GAGGTACAATTTTCAGAATC+AGG + chr8_3:14228065-14228084 None:intergenic 35.0%
ATTGTACCTCTATTGCTGAT+TGG - chr8_3:14228075-14228094 Msa1278170:three_prime_UTR 35.0%
! TTGTACCTCTATTGCTGATT+GGG - chr8_3:14228076-14228095 Msa1278170:three_prime_UTR 35.0%
GTAAATATAAATCTGGGGAG+TGG - chr8_3:14228528-14228547 Msa1278170:CDS 35.0%
!! AGCTTGGTTCTTTTAATGGA+TGG - chr8_3:14228627-14228646 Msa1278170:CDS 35.0%
!! TCTTTTAATGGATGGATGCT+TGG - chr8_3:14228635-14228654 Msa1278170:CDS 35.0%
!! CTTTTAATGGATGGATGCTT+GGG - chr8_3:14228636-14228655 Msa1278170:CDS 35.0%
! CAGATGAGCAGATTTTGAAT+GGG - chr8_3:14228776-14228795 Msa1278170:CDS 35.0%
TATAAACAAAGGGGCAATAG+GGG + chr8_3:14228952-14228971 None:intergenic 35.0%
CTTACTATGCAGCAATGAAA+TGG + chr8_3:14229002-14229021 None:intergenic 35.0%
AGCGATGATCTTCAAAATCA+TGG + chr8_3:14229073-14229092 None:intergenic 35.0%
TATTGTCCTTTGCTTGTAAG+TGG - chr8_3:14229154-14229173 Msa1278170:intron 35.0%
ATTGTCCTTTGCTTGTAAGT+GGG - chr8_3:14229155-14229174 Msa1278170:intron 35.0%
! TTTTTCCCACTTACAAGCAA+AGG + chr8_3:14229163-14229182 None:intergenic 35.0%
AAATGTTAACCTAGGTGATG+AGG - chr8_3:14229243-14229262 Msa1278170:intron 35.0%
TGTAAATGACTTAGGTGATG+AGG - chr8_3:14229267-14229286 Msa1278170:intron 35.0%
TGTAAATGACTTAGGTGATG+AGG - chr8_3:14229267-14229286 Msa1278170:intron 35.0%
!!! GTTTTAACTCTAACAACTGC+AGG + chr8_3:14229436-14229455 None:intergenic 35.0%
GGTCTACCTTATAGAAGAAA+GGG + chr8_3:14229495-14229514 None:intergenic 35.0%
TGGTCTACCTTATAGAAGAA+AGG + chr8_3:14229496-14229515 None:intergenic 35.0%
CATTCGAAAAAAGCTGCAAA+AGG + chr8_3:14229591-14229610 None:intergenic 35.0%
!!! CTTTTGCAGCTTTTTTCGAA+TGG - chr8_3:14229589-14229608 Msa1278170:CDS 35.0%
!! ACCAGAAGCATTAATTCTGA+GGG + chr8_3:14229644-14229663 None:intergenic 35.0%
!! TACCAGAAGCATTAATTCTG+AGG + chr8_3:14229645-14229664 None:intergenic 35.0%
ACGTTTAGGTGACTATTTGA+GGG + chr8_3:14229717-14229736 None:intergenic 35.0%
CATGCATGAGATATTGTAGT+CGG - chr8_3:14229876-14229895 Msa1278170:intron 35.0%
GCTTGGTTATATCCTTGTAT+CGG + chr8_3:14230024-14230043 None:intergenic 35.0%
!! GAGAAAAGGAAGTACTGTAT+AGG + chr8_3:14230135-14230154 None:intergenic 35.0%
!! GTTCTTTCTATTGACTTGTC+AGG - chr8_3:14230164-14230183 Msa1278170:CDS 35.0%
GTATTGCTGAGTCTAATTGT+TGG - chr8_3:14230271-14230290 Msa1278170:intron 35.0%
! GTTGGAACTCTTTCTTTTTG+TGG - chr8_3:14230289-14230308 Msa1278170:intron 35.0%
! GAACTCTTTCTTTTTGTGGA+CGG - chr8_3:14230293-14230312 Msa1278170:intron 35.0%
TCCATGACAAAAAGTCTTTC+AGG - chr8_3:14230371-14230390 Msa1278170:intron 35.0%
! TCCTGAAAGACTTTTTGTCA+TGG + chr8_3:14230375-14230394 None:intergenic 35.0%
TGGCTTCATCTCAATATCAT+TGG - chr8_3:14230476-14230495 Msa1278170:intron 35.0%
AGATAATATTGCCTCTACTC+CGG + chr8_3:14230571-14230590 None:intergenic 35.0%
ATTATCTAGTGATGATCTCC+AGG - chr8_3:14230584-14230603 Msa1278170:intron 35.0%
TTTATGACTTTGTGCTGAAG+TGG - chr8_3:14230625-14230644 Msa1278170:CDS 35.0%
TTATGACTTTGTGCTGAAGT+GGG - chr8_3:14230626-14230645 Msa1278170:CDS 35.0%
ATCATGTTCAAAGTCACTAC+AGG + chr8_3:14230763-14230782 None:intergenic 35.0%
ATACAAATATCGTCCTGTCA+AGG - chr8_3:14230899-14230918 Msa1278170:intron 35.0%
TTATTCTCAGGCATTTCACT+TGG - chr8_3:14231013-14231032 Msa1278170:intron 35.0%
TATTCTCAGGCATTTCACTT+GGG - chr8_3:14231014-14231033 Msa1278170:intron 35.0%
CAAAGTTCTTTCCATTGCTT+TGG - chr8_3:14231080-14231099 Msa1278170:intron 35.0%
!! TTTTTGGGAATGCAGGAAAA+GGG - chr8_3:14231107-14231126 Msa1278170:intron 35.0%
AAAGGCAATTACACATTCAC+AGG - chr8_3:14231203-14231222 Msa1278170:intron 35.0%
! GTTCTGTCAATGTCTTCTTT+TGG - chr8_3:14231440-14231459 Msa1278170:CDS 35.0%
! TCTGTCAATGTCTTCTTTTG+GGG - chr8_3:14231442-14231461 Msa1278170:CDS 35.0%
TACTGTTGCATGAAATCGAA+AGG - chr8_3:14231590-14231609 Msa1278170:exon 35.0%
GATTATGCATGGAGTTATCT+AGG - chr8_3:14231641-14231660 Msa1278170:five_prime_UTR 35.0%
!!! TACAAGTTGGTTCTTTTGCA+GGG - chr8_3:14231699-14231718 Msa1278170:five_prime_UTR 35.0%
ATTGAACAAAACATGCCCAA+GGG - chr8_3:14231760-14231779 Msa1278170:five_prime_UTR 35.0%
GTTGGAAATTGAAACGAAGT+GGG + chr8_3:14227816-14227835 None:intergenic 35.0%
ACGGAAAAAACCCTAAGATA+AGG + chr8_3:14227838-14227857 None:intergenic 35.0%
AATTAGAGAGACAGAGAAGA+GGG + chr8_3:14227862-14227881 None:intergenic 35.0%
AAATTAGAGAGACAGAGAAG+AGG + chr8_3:14227863-14227882 None:intergenic 35.0%
!! CAATTTTCAGAATCAGGTTG+AGG + chr8_3:14228059-14228078 None:intergenic 35.0%
! GAGGTACAATTTTCAGAATC+AGG + chr8_3:14228065-14228084 None:intergenic 35.0%
ATTGTACCTCTATTGCTGAT+TGG - chr8_3:14228075-14228094 Msa1278170:three_prime_UTR 35.0%
! TTGTACCTCTATTGCTGATT+GGG - chr8_3:14228076-14228095 Msa1278170:three_prime_UTR 35.0%
GTAAATATAAATCTGGGGAG+TGG - chr8_3:14228528-14228547 Msa1278170:CDS 35.0%
!! AGCTTGGTTCTTTTAATGGA+TGG - chr8_3:14228627-14228646 Msa1278170:CDS 35.0%
!! TCTTTTAATGGATGGATGCT+TGG - chr8_3:14228635-14228654 Msa1278170:CDS 35.0%
!! CTTTTAATGGATGGATGCTT+GGG - chr8_3:14228636-14228655 Msa1278170:CDS 35.0%
! CAGATGAGCAGATTTTGAAT+GGG - chr8_3:14228776-14228795 Msa1278170:CDS 35.0%
TATAAACAAAGGGGCAATAG+GGG + chr8_3:14228952-14228971 None:intergenic 35.0%
CTTACTATGCAGCAATGAAA+TGG + chr8_3:14229002-14229021 None:intergenic 35.0%
AGCGATGATCTTCAAAATCA+TGG + chr8_3:14229073-14229092 None:intergenic 35.0%
TATTGTCCTTTGCTTGTAAG+TGG - chr8_3:14229154-14229173 Msa1278170:intron 35.0%
ATTGTCCTTTGCTTGTAAGT+GGG - chr8_3:14229155-14229174 Msa1278170:intron 35.0%
! TTTTTCCCACTTACAAGCAA+AGG + chr8_3:14229163-14229182 None:intergenic 35.0%
AAATGTTAACCTAGGTGATG+AGG - chr8_3:14229243-14229262 Msa1278170:intron 35.0%
TGTAAATGACTTAGGTGATG+AGG - chr8_3:14229267-14229286 Msa1278170:intron 35.0%
TGTAAATGACTTAGGTGATG+AGG - chr8_3:14229267-14229286 Msa1278170:intron 35.0%
!!! GTTTTAACTCTAACAACTGC+AGG + chr8_3:14229436-14229455 None:intergenic 35.0%
GGTCTACCTTATAGAAGAAA+GGG + chr8_3:14229495-14229514 None:intergenic 35.0%
TGGTCTACCTTATAGAAGAA+AGG + chr8_3:14229496-14229515 None:intergenic 35.0%
CATTCGAAAAAAGCTGCAAA+AGG + chr8_3:14229591-14229610 None:intergenic 35.0%
!!! CTTTTGCAGCTTTTTTCGAA+TGG - chr8_3:14229589-14229608 Msa1278170:CDS 35.0%
!! ACCAGAAGCATTAATTCTGA+GGG + chr8_3:14229644-14229663 None:intergenic 35.0%
!! TACCAGAAGCATTAATTCTG+AGG + chr8_3:14229645-14229664 None:intergenic 35.0%
ACGTTTAGGTGACTATTTGA+GGG + chr8_3:14229717-14229736 None:intergenic 35.0%
CATGCATGAGATATTGTAGT+CGG - chr8_3:14229876-14229895 Msa1278170:intron 35.0%
GCTTGGTTATATCCTTGTAT+CGG + chr8_3:14230024-14230043 None:intergenic 35.0%
!! GAGAAAAGGAAGTACTGTAT+AGG + chr8_3:14230135-14230154 None:intergenic 35.0%
!! GTTCTTTCTATTGACTTGTC+AGG - chr8_3:14230164-14230183 Msa1278170:CDS 35.0%
GTATTGCTGAGTCTAATTGT+TGG - chr8_3:14230271-14230290 Msa1278170:intron 35.0%
! GTTGGAACTCTTTCTTTTTG+TGG - chr8_3:14230289-14230308 Msa1278170:intron 35.0%
! GAACTCTTTCTTTTTGTGGA+CGG - chr8_3:14230293-14230312 Msa1278170:intron 35.0%
TCCATGACAAAAAGTCTTTC+AGG - chr8_3:14230371-14230390 Msa1278170:intron 35.0%
! TCCTGAAAGACTTTTTGTCA+TGG + chr8_3:14230375-14230394 None:intergenic 35.0%
TGGCTTCATCTCAATATCAT+TGG - chr8_3:14230476-14230495 Msa1278170:intron 35.0%
AGATAATATTGCCTCTACTC+CGG + chr8_3:14230571-14230590 None:intergenic 35.0%
ATTATCTAGTGATGATCTCC+AGG - chr8_3:14230584-14230603 Msa1278170:intron 35.0%
TTTATGACTTTGTGCTGAAG+TGG - chr8_3:14230625-14230644 Msa1278170:CDS 35.0%
TTATGACTTTGTGCTGAAGT+GGG - chr8_3:14230626-14230645 Msa1278170:CDS 35.0%
ATCATGTTCAAAGTCACTAC+AGG + chr8_3:14230763-14230782 None:intergenic 35.0%
ATACAAATATCGTCCTGTCA+AGG - chr8_3:14230899-14230918 Msa1278170:intron 35.0%
TTATTCTCAGGCATTTCACT+TGG - chr8_3:14231013-14231032 Msa1278170:intron 35.0%
TATTCTCAGGCATTTCACTT+GGG - chr8_3:14231014-14231033 Msa1278170:intron 35.0%
CAAAGTTCTTTCCATTGCTT+TGG - chr8_3:14231080-14231099 Msa1278170:intron 35.0%
!! TTTTTGGGAATGCAGGAAAA+GGG - chr8_3:14231107-14231126 Msa1278170:intron 35.0%
AAAGGCAATTACACATTCAC+AGG - chr8_3:14231203-14231222 Msa1278170:intron 35.0%
! GTTCTGTCAATGTCTTCTTT+TGG - chr8_3:14231440-14231459 Msa1278170:CDS 35.0%
! TCTGTCAATGTCTTCTTTTG+GGG - chr8_3:14231442-14231461 Msa1278170:CDS 35.0%
TACTGTTGCATGAAATCGAA+AGG - chr8_3:14231590-14231609 Msa1278170:exon 35.0%
GATTATGCATGGAGTTATCT+AGG - chr8_3:14231641-14231660 Msa1278170:five_prime_UTR 35.0%
!!! TACAAGTTGGTTCTTTTGCA+GGG - chr8_3:14231699-14231718 Msa1278170:five_prime_UTR 35.0%
ATTGAACAAAACATGCCCAA+GGG - chr8_3:14231760-14231779 Msa1278170:five_prime_UTR 35.0%
GGTTGGAAATTGAAACGAAG+TGG + chr8_3:14227817-14227836 None:intergenic 40.0%
GAATTCCGATCTGTTTGATC+CGG - chr8_3:14227905-14227924 Msa1278170:three_prime_UTR 40.0%
TATGGTCTTCTGTTTGCAGT+TGG - chr8_3:14228745-14228764 Msa1278170:CDS 40.0%
ATGGTCTTCTGTTTGCAGTT+GGG - chr8_3:14228746-14228765 Msa1278170:CDS 40.0%
CCATTCAAAATCTGCTCATC+TGG + chr8_3:14228778-14228797 None:intergenic 40.0%
! CCAGATGAGCAGATTTTGAA+TGG - chr8_3:14228775-14228794 Msa1278170:CDS 40.0%
! TTGTGTGGCTTCTGAAAATC+AGG - chr8_3:14228819-14228838 Msa1278170:CDS 40.0%
GATGAGGCTGTAAATGACTT+AGG - chr8_3:14229259-14229278 Msa1278170:intron 40.0%
GATGAGGCTGTAAATGACTT+AGG - chr8_3:14229259-14229278 Msa1278170:intron 40.0%
GATCGGAGAACTGATATGTA+GGG + chr8_3:14229458-14229477 None:intergenic 40.0%
AGATCGGAGAACTGATATGT+AGG + chr8_3:14229459-14229478 None:intergenic 40.0%
ACATATCAGTTCTCCGATCT+TGG - chr8_3:14229459-14229478 Msa1278170:CDS 40.0%
!!! AGCTTTTTTCGAATGGGATG+AGG - chr8_3:14229596-14229615 Msa1278170:CDS 40.0%
!!! GCTTTTTTCGAATGGGATGA+GGG - chr8_3:14229597-14229616 Msa1278170:CDS 40.0%
ACCCTCAGAATTAATGCTTC+TGG - chr8_3:14229640-14229659 Msa1278170:CDS 40.0%
CACGTTTAGGTGACTATTTG+AGG + chr8_3:14229718-14229737 None:intergenic 40.0%
ATCAAAACATCCAGCAAACC+AGG + chr8_3:14229830-14229849 None:intergenic 40.0%
!!! TGGTTTGCTGGATGTTTTGA+TGG - chr8_3:14229829-14229848 Msa1278170:CDS 40.0%
AGGTAAAGCAATGCAGATTC+AGG + chr8_3:14229926-14229945 None:intergenic 40.0%
TGAATCTGCATTGCTTTACC+TGG - chr8_3:14229925-14229944 Msa1278170:intron 40.0%
TCAGCCATTAAGACACTAGA+TGG + chr8_3:14229956-14229975 None:intergenic 40.0%
AGTTCAACCACTAACTGATG+CGG - chr8_3:14229979-14229998 Msa1278170:CDS 40.0%
CCTTGAAAAATAGAGCCTCA+AGG + chr8_3:14230803-14230822 None:intergenic 40.0%
!! CCTTGAGGCTCTATTTTTCA+AGG - chr8_3:14230800-14230819 Msa1278170:intron 40.0%
TCAAATTCAACCACCTTGAC+AGG + chr8_3:14230915-14230934 None:intergenic 40.0%
CCAAATATACTACACACTGC+TGG + chr8_3:14230947-14230966 None:intergenic 40.0%
CCAGCAGTGTGTAGTATATT+TGG - chr8_3:14230944-14230963 Msa1278170:intron 40.0%
! ATATTTGGATCTAAAGCGGG+AGG - chr8_3:14230959-14230978 Msa1278170:intron 40.0%
GAAATGCCTGAGAATAAACC+CGG + chr8_3:14231010-14231029 None:intergenic 40.0%
TCTGTCAGCACATTGTAACA+TGG - chr8_3:14231052-14231071 Msa1278170:intron 40.0%
!!! CATTGCTTTGGGCTGTTTTT+GGG - chr8_3:14231092-14231111 Msa1278170:intron 40.0%
!! GTTTTTGGGAATGCAGGAAA+AGG - chr8_3:14231106-14231125 Msa1278170:intron 40.0%
! CACTGTGGACTATGAATTTG+CGG - chr8_3:14231142-14231161 Msa1278170:intron 40.0%
TTGCTAACAAACTCCTCTGT+TGG + chr8_3:14231179-14231198 None:intergenic 40.0%
! GAAACTTGTTTGCGATTCCA+TGG - chr8_3:14231246-14231265 Msa1278170:intron 40.0%
CTATCTAGACAATGTGCACT+AGG - chr8_3:14231563-14231582 Msa1278170:CDS 40.0%
AAAAGAACCAACTTGTAGGC+TGG + chr8_3:14231696-14231715 None:intergenic 40.0%
CTGCAAAAGAACCAACTTGT+AGG + chr8_3:14231700-14231719 None:intergenic 40.0%
!!! CTACAAGTTGGTTCTTTTGC+AGG - chr8_3:14231698-14231717 Msa1278170:five_prime_UTR 40.0%
TGTCGCACATGTGCATAATA+TGG - chr8_3:14231731-14231750 Msa1278170:five_prime_UTR 40.0%
GATTGAACAAAACATGCCCA+AGG - chr8_3:14231759-14231778 Msa1278170:five_prime_UTR 40.0%
GGTTGGAAATTGAAACGAAG+TGG + chr8_3:14227817-14227836 None:intergenic 40.0%
GAATTCCGATCTGTTTGATC+CGG - chr8_3:14227905-14227924 Msa1278170:three_prime_UTR 40.0%
TATGGTCTTCTGTTTGCAGT+TGG - chr8_3:14228745-14228764 Msa1278170:CDS 40.0%
ATGGTCTTCTGTTTGCAGTT+GGG - chr8_3:14228746-14228765 Msa1278170:CDS 40.0%
CCATTCAAAATCTGCTCATC+TGG + chr8_3:14228778-14228797 None:intergenic 40.0%
! CCAGATGAGCAGATTTTGAA+TGG - chr8_3:14228775-14228794 Msa1278170:CDS 40.0%
! TTGTGTGGCTTCTGAAAATC+AGG - chr8_3:14228819-14228838 Msa1278170:CDS 40.0%
GATGAGGCTGTAAATGACTT+AGG - chr8_3:14229259-14229278 Msa1278170:intron 40.0%
GATGAGGCTGTAAATGACTT+AGG - chr8_3:14229259-14229278 Msa1278170:intron 40.0%
GATCGGAGAACTGATATGTA+GGG + chr8_3:14229458-14229477 None:intergenic 40.0%
AGATCGGAGAACTGATATGT+AGG + chr8_3:14229459-14229478 None:intergenic 40.0%
ACATATCAGTTCTCCGATCT+TGG - chr8_3:14229459-14229478 Msa1278170:CDS 40.0%
!!! AGCTTTTTTCGAATGGGATG+AGG - chr8_3:14229596-14229615 Msa1278170:CDS 40.0%
!!! GCTTTTTTCGAATGGGATGA+GGG - chr8_3:14229597-14229616 Msa1278170:CDS 40.0%
ACCCTCAGAATTAATGCTTC+TGG - chr8_3:14229640-14229659 Msa1278170:CDS 40.0%
CACGTTTAGGTGACTATTTG+AGG + chr8_3:14229718-14229737 None:intergenic 40.0%
ATCAAAACATCCAGCAAACC+AGG + chr8_3:14229830-14229849 None:intergenic 40.0%
!!! TGGTTTGCTGGATGTTTTGA+TGG - chr8_3:14229829-14229848 Msa1278170:CDS 40.0%
AGGTAAAGCAATGCAGATTC+AGG + chr8_3:14229926-14229945 None:intergenic 40.0%
TGAATCTGCATTGCTTTACC+TGG - chr8_3:14229925-14229944 Msa1278170:intron 40.0%
TCAGCCATTAAGACACTAGA+TGG + chr8_3:14229956-14229975 None:intergenic 40.0%
AGTTCAACCACTAACTGATG+CGG - chr8_3:14229979-14229998 Msa1278170:CDS 40.0%
CCTTGAAAAATAGAGCCTCA+AGG + chr8_3:14230803-14230822 None:intergenic 40.0%
!! CCTTGAGGCTCTATTTTTCA+AGG - chr8_3:14230800-14230819 Msa1278170:intron 40.0%
TCAAATTCAACCACCTTGAC+AGG + chr8_3:14230915-14230934 None:intergenic 40.0%
CCAAATATACTACACACTGC+TGG + chr8_3:14230947-14230966 None:intergenic 40.0%
CCAGCAGTGTGTAGTATATT+TGG - chr8_3:14230944-14230963 Msa1278170:intron 40.0%
! ATATTTGGATCTAAAGCGGG+AGG - chr8_3:14230959-14230978 Msa1278170:intron 40.0%
GAAATGCCTGAGAATAAACC+CGG + chr8_3:14231010-14231029 None:intergenic 40.0%
TCTGTCAGCACATTGTAACA+TGG - chr8_3:14231052-14231071 Msa1278170:intron 40.0%
!!! CATTGCTTTGGGCTGTTTTT+GGG - chr8_3:14231092-14231111 Msa1278170:intron 40.0%
!! GTTTTTGGGAATGCAGGAAA+AGG - chr8_3:14231106-14231125 Msa1278170:intron 40.0%
! CACTGTGGACTATGAATTTG+CGG - chr8_3:14231142-14231161 Msa1278170:intron 40.0%
TTGCTAACAAACTCCTCTGT+TGG + chr8_3:14231179-14231198 None:intergenic 40.0%
! GAAACTTGTTTGCGATTCCA+TGG - chr8_3:14231246-14231265 Msa1278170:intron 40.0%
CTATCTAGACAATGTGCACT+AGG - chr8_3:14231563-14231582 Msa1278170:CDS 40.0%
AAAAGAACCAACTTGTAGGC+TGG + chr8_3:14231696-14231715 None:intergenic 40.0%
CTGCAAAAGAACCAACTTGT+AGG + chr8_3:14231700-14231719 None:intergenic 40.0%
!!! CTACAAGTTGGTTCTTTTGC+AGG - chr8_3:14231698-14231717 Msa1278170:five_prime_UTR 40.0%
TGTCGCACATGTGCATAATA+TGG - chr8_3:14231731-14231750 Msa1278170:five_prime_UTR 40.0%
GATTGAACAAAACATGCCCA+AGG - chr8_3:14231759-14231778 Msa1278170:five_prime_UTR 40.0%
CGTAACCGGATCAAACAGAT+CGG + chr8_3:14227913-14227932 None:intergenic 45.0%
CGATCTGTTTGATCCGGTTA+CGG - chr8_3:14227911-14227930 Msa1278170:three_prime_UTR 45.0%
!! TTACGGTGATGGAATCCGAA+TGG - chr8_3:14227928-14227947 Msa1278170:three_prime_UTR 45.0%
!! TACGGTGATGGAATCCGAAT+GGG - chr8_3:14227929-14227948 Msa1278170:three_prime_UTR 45.0%
AGGTTGAGGATCAACTGGAT+CGG + chr8_3:14228045-14228064 None:intergenic 45.0%
!! GAATCAGGTTGAGGATCAAC+TGG + chr8_3:14228050-14228069 None:intergenic 45.0%
! TGGGGAGTGGTGTGATTTTT+GGG - chr8_3:14228541-14228560 Msa1278170:CDS 45.0%
TGGTCTTCTGTTTGCAGTTG+GGG - chr8_3:14228747-14228766 Msa1278170:CDS 45.0%
CACAATCATCCATGTCAGGT+TGG + chr8_3:14228804-14228823 None:intergenic 45.0%
ACCTGACATGGATGATTGTG+TGG - chr8_3:14228804-14228823 Msa1278170:CDS 45.0%
! TGTGGCTTCTGAAAATCAGG+AGG - chr8_3:14228822-14228841 Msa1278170:CDS 45.0%
GGAGGAAGAAGTTGTTGCAA+TGG - chr8_3:14228840-14228859 Msa1278170:CDS 45.0%
ATGGTTGAAGAATCCCCTTC+TGG - chr8_3:14228859-14228878 Msa1278170:CDS 45.0%
CATTTACAGCCTCATCACCT+AGG + chr8_3:14229255-14229274 None:intergenic 45.0%
TGACAATGATGAACCCAACC+TGG - chr8_3:14229393-14229412 Msa1278170:intron 45.0%
GACAATGATGAACCCAACCT+GGG - chr8_3:14229394-14229413 Msa1278170:intron 45.0%
TTCGAATGGGATGAGGGAAT+CGG - chr8_3:14229603-14229622 Msa1278170:CDS 45.0%
TACAGAAGAAGCTGCTCTCA+TGG - chr8_3:14229757-14229776 Msa1278170:intron 45.0%
TTGAGCATTAAGACAGCACC+TGG - chr8_3:14229809-14229828 Msa1278170:intron 45.0%
GCTGCCATCTAGTGTCTTAA+TGG - chr8_3:14229949-14229968 Msa1278170:intron 45.0%
GTATCTTGCTAGCCGATACA+AGG - chr8_3:14230009-14230028 Msa1278170:CDS 45.0%
CATGTATATGACCAGGTTCC+AGG - chr8_3:14230521-14230540 Msa1278170:intron 45.0%
TATCTTCCAGATTGCCGTAC+TGG + chr8_3:14230659-14230678 None:intergenic 45.0%
AGTACGGCAATCTGGAAGAT+AGG - chr8_3:14230658-14230677 Msa1278170:CDS 45.0%
TTCATCCAAGCTTGTCCTTG+AGG - chr8_3:14230785-14230804 Msa1278170:intron 45.0%
!!! GGCTCTATTTTTCAAGGCAG+AGG - chr8_3:14230806-14230825 Msa1278170:intron 45.0%
CAAATATCGTCCTGTCAAGG+TGG - chr8_3:14230902-14230921 Msa1278170:intron 45.0%
! TGTTCCAATTTGTTCCCGTC+TGG - chr8_3:14230984-14231003 Msa1278170:intron 45.0%
CATTTCACTTGGGTGGACAA+GGG - chr8_3:14231024-14231043 Msa1278170:intron 45.0%
CCAAAAACAGCCCAAAGCAA+TGG + chr8_3:14231094-14231113 None:intergenic 45.0%
!! CCATTGCTTTGGGCTGTTTT+TGG - chr8_3:14231091-14231110 Msa1278170:intron 45.0%
TGGACTATGAATTTGCGGCA+AGG - chr8_3:14231147-14231166 Msa1278170:intron 45.0%
GGCAATTACACATTCACAGG+TGG - chr8_3:14231206-14231225 Msa1278170:intron 45.0%
TTACACATTCACAGGTGGCA+AGG - chr8_3:14231211-14231230 Msa1278170:intron 45.0%
GATTCCATGGACTTCGTTCA+TGG - chr8_3:14231259-14231278 Msa1278170:intron 45.0%
TTAATGGCGTTCTGCACCTA+AGG - chr8_3:14231303-14231322 Msa1278170:intron 45.0%
TAATGGCGTTCTGCACCTAA+GGG - chr8_3:14231304-14231323 Msa1278170:intron 45.0%
ATCAGACAGTGACACACATG+CGG - chr8_3:14231338-14231357 Msa1278170:intron 45.0%
TTTGTGACCAGCCTACAAGT+TGG - chr8_3:14231686-14231705 Msa1278170:five_prime_UTR 45.0%
!! AGTTGGTTCTTTTGCAGGGT+TGG - chr8_3:14231703-14231722 Msa1278170:five_prime_UTR 45.0%
CGTAACCGGATCAAACAGAT+CGG + chr8_3:14227913-14227932 None:intergenic 45.0%
CGATCTGTTTGATCCGGTTA+CGG - chr8_3:14227911-14227930 Msa1278170:three_prime_UTR 45.0%
!! TTACGGTGATGGAATCCGAA+TGG - chr8_3:14227928-14227947 Msa1278170:three_prime_UTR 45.0%
!! TACGGTGATGGAATCCGAAT+GGG - chr8_3:14227929-14227948 Msa1278170:three_prime_UTR 45.0%
AGGTTGAGGATCAACTGGAT+CGG + chr8_3:14228045-14228064 None:intergenic 45.0%
!! GAATCAGGTTGAGGATCAAC+TGG + chr8_3:14228050-14228069 None:intergenic 45.0%
! TGGGGAGTGGTGTGATTTTT+GGG - chr8_3:14228541-14228560 Msa1278170:CDS 45.0%
TGGTCTTCTGTTTGCAGTTG+GGG - chr8_3:14228747-14228766 Msa1278170:CDS 45.0%
CACAATCATCCATGTCAGGT+TGG + chr8_3:14228804-14228823 None:intergenic 45.0%
ACCTGACATGGATGATTGTG+TGG - chr8_3:14228804-14228823 Msa1278170:CDS 45.0%
! TGTGGCTTCTGAAAATCAGG+AGG - chr8_3:14228822-14228841 Msa1278170:CDS 45.0%
GGAGGAAGAAGTTGTTGCAA+TGG - chr8_3:14228840-14228859 Msa1278170:CDS 45.0%
ATGGTTGAAGAATCCCCTTC+TGG - chr8_3:14228859-14228878 Msa1278170:CDS 45.0%
CATTTACAGCCTCATCACCT+AGG + chr8_3:14229255-14229274 None:intergenic 45.0%
TGACAATGATGAACCCAACC+TGG - chr8_3:14229393-14229412 Msa1278170:intron 45.0%
GACAATGATGAACCCAACCT+GGG - chr8_3:14229394-14229413 Msa1278170:intron 45.0%
TTCGAATGGGATGAGGGAAT+CGG - chr8_3:14229603-14229622 Msa1278170:CDS 45.0%
TACAGAAGAAGCTGCTCTCA+TGG - chr8_3:14229757-14229776 Msa1278170:intron 45.0%
TTGAGCATTAAGACAGCACC+TGG - chr8_3:14229809-14229828 Msa1278170:intron 45.0%
GCTGCCATCTAGTGTCTTAA+TGG - chr8_3:14229949-14229968 Msa1278170:intron 45.0%
GTATCTTGCTAGCCGATACA+AGG - chr8_3:14230009-14230028 Msa1278170:CDS 45.0%
CATGTATATGACCAGGTTCC+AGG - chr8_3:14230521-14230540 Msa1278170:intron 45.0%
TATCTTCCAGATTGCCGTAC+TGG + chr8_3:14230659-14230678 None:intergenic 45.0%
AGTACGGCAATCTGGAAGAT+AGG - chr8_3:14230658-14230677 Msa1278170:CDS 45.0%
TTCATCCAAGCTTGTCCTTG+AGG - chr8_3:14230785-14230804 Msa1278170:intron 45.0%
!!! GGCTCTATTTTTCAAGGCAG+AGG - chr8_3:14230806-14230825 Msa1278170:intron 45.0%
CAAATATCGTCCTGTCAAGG+TGG - chr8_3:14230902-14230921 Msa1278170:intron 45.0%
! TGTTCCAATTTGTTCCCGTC+TGG - chr8_3:14230984-14231003 Msa1278170:intron 45.0%
CATTTCACTTGGGTGGACAA+GGG - chr8_3:14231024-14231043 Msa1278170:intron 45.0%
CCAAAAACAGCCCAAAGCAA+TGG + chr8_3:14231094-14231113 None:intergenic 45.0%
!! CCATTGCTTTGGGCTGTTTT+TGG - chr8_3:14231091-14231110 Msa1278170:intron 45.0%
TGGACTATGAATTTGCGGCA+AGG - chr8_3:14231147-14231166 Msa1278170:intron 45.0%
GGCAATTACACATTCACAGG+TGG - chr8_3:14231206-14231225 Msa1278170:intron 45.0%
TTACACATTCACAGGTGGCA+AGG - chr8_3:14231211-14231230 Msa1278170:intron 45.0%
GATTCCATGGACTTCGTTCA+TGG - chr8_3:14231259-14231278 Msa1278170:intron 45.0%
TTAATGGCGTTCTGCACCTA+AGG - chr8_3:14231303-14231322 Msa1278170:intron 45.0%
TAATGGCGTTCTGCACCTAA+GGG - chr8_3:14231304-14231323 Msa1278170:intron 45.0%
ATCAGACAGTGACACACATG+CGG - chr8_3:14231338-14231357 Msa1278170:intron 45.0%
TTTGTGACCAGCCTACAAGT+TGG - chr8_3:14231686-14231705 Msa1278170:five_prime_UTR 45.0%
!! AGTTGGTTCTTTTGCAGGGT+TGG - chr8_3:14231703-14231722 Msa1278170:five_prime_UTR 45.0%
!!! AAAATGTTTTTTTTTAATTA+TGG - chr8_3:14228338-14228357 Msa1278170:CDS 5.0%
!!! AAATGTTTTTTTTTAATTAT+GGG - chr8_3:14228339-14228358 Msa1278170:CDS 5.0%
!!! AAAATGTTTTTTTTTAATTA+TGG - chr8_3:14228338-14228357 Msa1278170:CDS 5.0%
!!! AAATGTTTTTTTTTAATTAT+GGG - chr8_3:14228339-14228358 Msa1278170:CDS 5.0%
GAGAGACAGAGAAGAGGGAA+CGG + chr8_3:14227857-14227876 None:intergenic 50.0%
GTTTGATCCGGTTACGGTGA+TGG - chr8_3:14227917-14227936 Msa1278170:three_prime_UTR 50.0%
TCGGATTCCATCACCGTAAC+CGG + chr8_3:14227927-14227946 None:intergenic 50.0%
! ATGGAATCCGAATGGGCTCA+CGG - chr8_3:14227936-14227955 Msa1278170:three_prime_UTR 50.0%
AGCAAATCCGAAATCGGCGT+CGG + chr8_3:14227973-14227992 None:intergenic 50.0%
! CTGGGGAGTGGTGTGATTTT+TGG - chr8_3:14228540-14228559 Msa1278170:CDS 50.0%
! GGGGAGTGGTGTGATTTTTG+GGG - chr8_3:14228542-14228561 Msa1278170:CDS 50.0%
GAATGGGAACCAACCTGACA+TGG - chr8_3:14228792-14228811 Msa1278170:CDS 50.0%
GCCACACAATCATCCATGTC+AGG + chr8_3:14228808-14228827 None:intergenic 50.0%
GAGTAATCCATGCCCAGGTT+GGG + chr8_3:14229409-14229428 None:intergenic 50.0%
AGAGTAATCCATGCCCAGGT+TGG + chr8_3:14229410-14229429 None:intergenic 50.0%
GTTCAGAGTAATCCATGCCC+AGG + chr8_3:14229414-14229433 None:intergenic 50.0%
! GGGCTTTTAGCAGCCAAGAT+CGG + chr8_3:14229475-14229494 None:intergenic 50.0%
! TAAGACAGCACCTGGTTTGC+TGG - chr8_3:14229817-14229836 Msa1278170:intron 50.0%
TGCTTTGCCGCATCAGTTAG+TGG + chr8_3:14229989-14230008 None:intergenic 50.0%
! TGACTTGTCAGGGACTAGAG+AGG - chr8_3:14230175-14230194 Msa1278170:CDS 50.0%
TTGTCAGGGACTAGAGAGGT+GGG - chr8_3:14230179-14230198 Msa1278170:CDS 50.0%
GCAAGTTCATAACCTCGTCC+TGG + chr8_3:14230542-14230561 None:intergenic 50.0%
GTTATGAACTTGCCCCTAGC+CGG - chr8_3:14230549-14230568 Msa1278170:intron 50.0%
TATTGCCTCTACTCCGGCTA+GGG + chr8_3:14230565-14230584 None:intergenic 50.0%
ATATTGCCTCTACTCCGGCT+AGG + chr8_3:14230566-14230585 None:intergenic 50.0%
CAGCATCTTCTGATGCAACC+TGG + chr8_3:14230605-14230624 None:intergenic 50.0%
!! AAGTGGGCTAGACACCAGTA+CGG - chr8_3:14230642-14230661 Msa1278170:CDS 50.0%
TAGACACCAGTACGGCAATC+TGG - chr8_3:14230650-14230669 Msa1278170:CDS 50.0%
GAAGATAGGCGAGAAGTCCT+AGG - chr8_3:14230672-14230691 Msa1278170:CDS 50.0%
GCTTTCGGCAGGTCATATGA+GGG + chr8_3:14230725-14230744 None:intergenic 50.0%
AGCTTTCGGCAGGTCATATG+AGG + chr8_3:14230726-14230745 None:intergenic 50.0%
GACCTGCCGAAAGCTTAAGA+AGG - chr8_3:14230731-14230750 Msa1278170:intron 50.0%
GACCTTCTTAAGCTTTCGGC+AGG + chr8_3:14230736-14230755 None:intergenic 50.0%
TAGAGCCTCAAGGACAAGCT+TGG + chr8_3:14230793-14230812 None:intergenic 50.0%
TTGCTCAAGCCGTCGTTTCT+TGG - chr8_3:14230869-14230888 Msa1278170:intron 50.0%
AAGCCGTCGTTTCTTGGAGA+GGG - chr8_3:14230875-14230894 Msa1278170:intron 50.0%
ATGCCCTCTCCAAGAAACGA+CGG + chr8_3:14230881-14230900 None:intergenic 50.0%
TATACTACACACTGCTGGCG+TGG + chr8_3:14230942-14230961 None:intergenic 50.0%
TGAGAATAAACCCGGCCAGA+CGG + chr8_3:14231002-14231021 None:intergenic 50.0%
TCTCAGGCATTTCACTTGGG+TGG - chr8_3:14231017-14231036 Msa1278170:intron 50.0%
GCATTTCACTTGGGTGGACA+AGG - chr8_3:14231023-14231042 Msa1278170:intron 50.0%
!!! TGGGCTGTTTTTGGGAATGC+AGG - chr8_3:14231100-14231119 Msa1278170:intron 50.0%
TCAGCCATGAACGAAGTCCA+TGG + chr8_3:14231266-14231285 None:intergenic 50.0%
ATGGACTTCGTTCATGGCTG+AGG - chr8_3:14231265-14231284 Msa1278170:intron 50.0%
! TCACTGTCTGATGGTGAGCT+CGG + chr8_3:14231330-14231349 None:intergenic 50.0%
! GCATGTGTGTCACTGTCTGA+TGG + chr8_3:14231339-14231358 None:intergenic 50.0%
GAGAGACAGAGAAGAGGGAA+CGG + chr8_3:14227857-14227876 None:intergenic 50.0%
GTTTGATCCGGTTACGGTGA+TGG - chr8_3:14227917-14227936 Msa1278170:three_prime_UTR 50.0%
TCGGATTCCATCACCGTAAC+CGG + chr8_3:14227927-14227946 None:intergenic 50.0%
! ATGGAATCCGAATGGGCTCA+CGG - chr8_3:14227936-14227955 Msa1278170:three_prime_UTR 50.0%
AGCAAATCCGAAATCGGCGT+CGG + chr8_3:14227973-14227992 None:intergenic 50.0%
! CTGGGGAGTGGTGTGATTTT+TGG - chr8_3:14228540-14228559 Msa1278170:CDS 50.0%
! GGGGAGTGGTGTGATTTTTG+GGG - chr8_3:14228542-14228561 Msa1278170:CDS 50.0%
GAATGGGAACCAACCTGACA+TGG - chr8_3:14228792-14228811 Msa1278170:CDS 50.0%
GCCACACAATCATCCATGTC+AGG + chr8_3:14228808-14228827 None:intergenic 50.0%
GAGTAATCCATGCCCAGGTT+GGG + chr8_3:14229409-14229428 None:intergenic 50.0%
AGAGTAATCCATGCCCAGGT+TGG + chr8_3:14229410-14229429 None:intergenic 50.0%
GTTCAGAGTAATCCATGCCC+AGG + chr8_3:14229414-14229433 None:intergenic 50.0%
! GGGCTTTTAGCAGCCAAGAT+CGG + chr8_3:14229475-14229494 None:intergenic 50.0%
! TAAGACAGCACCTGGTTTGC+TGG - chr8_3:14229817-14229836 Msa1278170:intron 50.0%
TGCTTTGCCGCATCAGTTAG+TGG + chr8_3:14229989-14230008 None:intergenic 50.0%
! TGACTTGTCAGGGACTAGAG+AGG - chr8_3:14230175-14230194 Msa1278170:CDS 50.0%
TTGTCAGGGACTAGAGAGGT+GGG - chr8_3:14230179-14230198 Msa1278170:CDS 50.0%
GCAAGTTCATAACCTCGTCC+TGG + chr8_3:14230542-14230561 None:intergenic 50.0%
GTTATGAACTTGCCCCTAGC+CGG - chr8_3:14230549-14230568 Msa1278170:intron 50.0%
TATTGCCTCTACTCCGGCTA+GGG + chr8_3:14230565-14230584 None:intergenic 50.0%
ATATTGCCTCTACTCCGGCT+AGG + chr8_3:14230566-14230585 None:intergenic 50.0%
CAGCATCTTCTGATGCAACC+TGG + chr8_3:14230605-14230624 None:intergenic 50.0%
!! AAGTGGGCTAGACACCAGTA+CGG - chr8_3:14230642-14230661 Msa1278170:CDS 50.0%
TAGACACCAGTACGGCAATC+TGG - chr8_3:14230650-14230669 Msa1278170:CDS 50.0%
GAAGATAGGCGAGAAGTCCT+AGG - chr8_3:14230672-14230691 Msa1278170:CDS 50.0%
GCTTTCGGCAGGTCATATGA+GGG + chr8_3:14230725-14230744 None:intergenic 50.0%
AGCTTTCGGCAGGTCATATG+AGG + chr8_3:14230726-14230745 None:intergenic 50.0%
GACCTGCCGAAAGCTTAAGA+AGG - chr8_3:14230731-14230750 Msa1278170:intron 50.0%
GACCTTCTTAAGCTTTCGGC+AGG + chr8_3:14230736-14230755 None:intergenic 50.0%
TAGAGCCTCAAGGACAAGCT+TGG + chr8_3:14230793-14230812 None:intergenic 50.0%
TTGCTCAAGCCGTCGTTTCT+TGG - chr8_3:14230869-14230888 Msa1278170:intron 50.0%
AAGCCGTCGTTTCTTGGAGA+GGG - chr8_3:14230875-14230894 Msa1278170:intron 50.0%
ATGCCCTCTCCAAGAAACGA+CGG + chr8_3:14230881-14230900 None:intergenic 50.0%
TATACTACACACTGCTGGCG+TGG + chr8_3:14230942-14230961 None:intergenic 50.0%
TGAGAATAAACCCGGCCAGA+CGG + chr8_3:14231002-14231021 None:intergenic 50.0%
TCTCAGGCATTTCACTTGGG+TGG - chr8_3:14231017-14231036 Msa1278170:intron 50.0%
GCATTTCACTTGGGTGGACA+AGG - chr8_3:14231023-14231042 Msa1278170:intron 50.0%
!!! TGGGCTGTTTTTGGGAATGC+AGG - chr8_3:14231100-14231119 Msa1278170:intron 50.0%
TCAGCCATGAACGAAGTCCA+TGG + chr8_3:14231266-14231285 None:intergenic 50.0%
ATGGACTTCGTTCATGGCTG+AGG - chr8_3:14231265-14231284 Msa1278170:intron 50.0%
! TCACTGTCTGATGGTGAGCT+CGG + chr8_3:14231330-14231349 None:intergenic 50.0%
! GCATGTGTGTCACTGTCTGA+TGG + chr8_3:14231339-14231358 None:intergenic 50.0%
AGAACCACCGTGAGCCCATT+CGG + chr8_3:14227946-14227965 None:intergenic 55.0%
!! TCTAGCTCCGACGCCGATTT+CGG - chr8_3:14227963-14227982 Msa1278170:three_prime_UTR 55.0%
CCTCGCCCAATCAGCAATAG+AGG + chr8_3:14228084-14228103 None:intergenic 55.0%
! CCTCTATTGCTGATTGGGCG+AGG - chr8_3:14228081-14228100 Msa1278170:three_prime_UTR 55.0%
! TTGCTGATTGGGCGAGGCAT+CGG - chr8_3:14228087-14228106 Msa1278170:three_prime_UTR 55.0%
TGATGAACCCAACCTGGGCA+TGG - chr8_3:14229399-14229418 Msa1278170:intron 55.0%
AGACACTAGATGGCAGCTCC+AGG + chr8_3:14229946-14229965 None:intergenic 55.0%
CTTGTCAGGGACTAGAGAGG+TGG - chr8_3:14230178-14230197 Msa1278170:CDS 55.0%
AGGTGGGTGTGTGTGTGTGT+GGG - chr8_3:14230195-14230214 Msa1278170:CDS 55.0%
TATGACCAGGTTCCAGGACG+AGG - chr8_3:14230527-14230546 Msa1278170:intron 55.0%
CATAACCTCGTCCTGGAACC+TGG + chr8_3:14230535-14230554 None:intergenic 55.0%
ATTGCCTCTACTCCGGCTAG+GGG + chr8_3:14230564-14230583 None:intergenic 55.0%
GGCAGGTCATATGAGGGAAG+CGG + chr8_3:14230719-14230738 None:intergenic 55.0%
CAGAGGTTCCACATCGCCAA+CGG - chr8_3:14230823-14230842 Msa1278170:intron 55.0%
AAACGACGGCTTGAGCAAGC+AGG + chr8_3:14230867-14230886 None:intergenic 55.0%
CAAGCCGTCGTTTCTTGGAG+AGG - chr8_3:14230874-14230893 Msa1278170:intron 55.0%
! CCAATTTGTTCCCGTCTGGC+CGG - chr8_3:14230988-14231007 Msa1278170:intron 55.0%
! CAATTTGTTCCCGTCTGGCC+GGG - chr8_3:14230989-14231008 Msa1278170:intron 55.0%
GAGAATAAACCCGGCCAGAC+GGG + chr8_3:14231001-14231020 None:intergenic 55.0%
GTCTGGCCGGGTTTATTCTC+AGG - chr8_3:14231001-14231020 Msa1278170:intron 55.0%
GGGATCAGTGAGCTTCACTG+TGG - chr8_3:14231127-14231146 Msa1278170:intron 55.0%
GGCAAGGTCAAGACCAACAG+AGG - chr8_3:14231163-14231182 Msa1278170:intron 55.0%
TTCACAGGTGGCAAGGCTGT+TGG - chr8_3:14231218-14231237 Msa1278170:intron 55.0%
AGAACCACCGTGAGCCCATT+CGG + chr8_3:14227946-14227965 None:intergenic 55.0%
!! TCTAGCTCCGACGCCGATTT+CGG - chr8_3:14227963-14227982 Msa1278170:three_prime_UTR 55.0%
CCTCGCCCAATCAGCAATAG+AGG + chr8_3:14228084-14228103 None:intergenic 55.0%
! CCTCTATTGCTGATTGGGCG+AGG - chr8_3:14228081-14228100 Msa1278170:three_prime_UTR 55.0%
! TTGCTGATTGGGCGAGGCAT+CGG - chr8_3:14228087-14228106 Msa1278170:three_prime_UTR 55.0%
TGATGAACCCAACCTGGGCA+TGG - chr8_3:14229399-14229418 Msa1278170:intron 55.0%
AGACACTAGATGGCAGCTCC+AGG + chr8_3:14229946-14229965 None:intergenic 55.0%
CTTGTCAGGGACTAGAGAGG+TGG - chr8_3:14230178-14230197 Msa1278170:CDS 55.0%
AGGTGGGTGTGTGTGTGTGT+GGG - chr8_3:14230195-14230214 Msa1278170:CDS 55.0%
TATGACCAGGTTCCAGGACG+AGG - chr8_3:14230527-14230546 Msa1278170:intron 55.0%
CATAACCTCGTCCTGGAACC+TGG + chr8_3:14230535-14230554 None:intergenic 55.0%
ATTGCCTCTACTCCGGCTAG+GGG + chr8_3:14230564-14230583 None:intergenic 55.0%
GGCAGGTCATATGAGGGAAG+CGG + chr8_3:14230719-14230738 None:intergenic 55.0%
CAGAGGTTCCACATCGCCAA+CGG - chr8_3:14230823-14230842 Msa1278170:intron 55.0%
AAACGACGGCTTGAGCAAGC+AGG + chr8_3:14230867-14230886 None:intergenic 55.0%
CAAGCCGTCGTTTCTTGGAG+AGG - chr8_3:14230874-14230893 Msa1278170:intron 55.0%
! CCAATTTGTTCCCGTCTGGC+CGG - chr8_3:14230988-14231007 Msa1278170:intron 55.0%
! CAATTTGTTCCCGTCTGGCC+GGG - chr8_3:14230989-14231008 Msa1278170:intron 55.0%
GAGAATAAACCCGGCCAGAC+GGG + chr8_3:14231001-14231020 None:intergenic 55.0%
GTCTGGCCGGGTTTATTCTC+AGG - chr8_3:14231001-14231020 Msa1278170:intron 55.0%
GGGATCAGTGAGCTTCACTG+TGG - chr8_3:14231127-14231146 Msa1278170:intron 55.0%
GGCAAGGTCAAGACCAACAG+AGG - chr8_3:14231163-14231182 Msa1278170:intron 55.0%
TTCACAGGTGGCAAGGCTGT+TGG - chr8_3:14231218-14231237 Msa1278170:intron 55.0%
! GAATCCGAATGGGCTCACGG+TGG - chr8_3:14227939-14227958 Msa1278170:three_prime_UTR 60.0%
!! ATTGGGCGAGGCATCGGAAG+AGG - chr8_3:14228093-14228112 Msa1278170:three_prime_UTR 60.0%
GAGGTGGGTGTGTGTGTGTG+TGG - chr8_3:14230194-14230213 Msa1278170:CDS 60.0%
GGTGGGTGTGTGTGTGTGTG+GGG - chr8_3:14230196-14230215 Msa1278170:CDS 60.0%
GTGGGTGTGTGTGTGTGTGG+GGG - chr8_3:14230197-14230216 Msa1278170:CDS 60.0%
TGGGTGTGTGTGTGTGTGGG+GGG - chr8_3:14230198-14230217 Msa1278170:CDS 60.0%
TCCACATCGCCAACGGTCAC+TGG - chr8_3:14230830-14230849 Msa1278170:intron 60.0%
CTTCAGCTGCCAGTGACCGT+TGG + chr8_3:14230842-14230861 None:intergenic 60.0%
CCGGCCAGACGGGAACAAAT+TGG + chr8_3:14230991-14231010 None:intergenic 60.0%
! TGATGGTGAGCTCGGCCCTT+AGG + chr8_3:14231322-14231341 None:intergenic 60.0%
! GAATCCGAATGGGCTCACGG+TGG - chr8_3:14227939-14227958 Msa1278170:three_prime_UTR 60.0%
!! ATTGGGCGAGGCATCGGAAG+AGG - chr8_3:14228093-14228112 Msa1278170:three_prime_UTR 60.0%
GAGGTGGGTGTGTGTGTGTG+TGG - chr8_3:14230194-14230213 Msa1278170:CDS 60.0%
GGTGGGTGTGTGTGTGTGTG+GGG - chr8_3:14230196-14230215 Msa1278170:CDS 60.0%
GTGGGTGTGTGTGTGTGTGG+GGG - chr8_3:14230197-14230216 Msa1278170:CDS 60.0%
TGGGTGTGTGTGTGTGTGGG+GGG - chr8_3:14230198-14230217 Msa1278170:CDS 60.0%
TCCACATCGCCAACGGTCAC+TGG - chr8_3:14230830-14230849 Msa1278170:intron 60.0%
CTTCAGCTGCCAGTGACCGT+TGG + chr8_3:14230842-14230861 None:intergenic 60.0%
CCGGCCAGACGGGAACAAAT+TGG + chr8_3:14230991-14231010 None:intergenic 60.0%
! TGATGGTGAGCTCGGCCCTT+AGG + chr8_3:14231322-14231341 None:intergenic 60.0%
GGGTGTGTGTGTGTGTGGGG+GGG - chr8_3:14230199-14230218 Msa1278170:CDS 65.0%
GGTGTGTGTGTGTGTGGGGG+GGG - chr8_3:14230200-14230219 Msa1278170:CDS 65.0%
GTGTGTGTGTGTGTGGGGGG+GGG - chr8_3:14230201-14230220 Msa1278170:CDS 65.0%
TGTGTGTGTGTGTGGGGGGG+GGG - chr8_3:14230202-14230221 Msa1278170:CDS 65.0%
CTTGCCCCTAGCCGGAGTAG+AGG - chr8_3:14230557-14230576 Msa1278170:intron 65.0%
GGCGAGAAGTCCTAGGCTCG+CGG - chr8_3:14230679-14230698 Msa1278170:CDS 65.0%
ATCGTGCAAGCCGCGAGCCT+AGG + chr8_3:14230692-14230711 None:intergenic 65.0%
GCCAGTGACCGTTGGCGATG+TGG + chr8_3:14230834-14230853 None:intergenic 65.0%
GGGTGTGTGTGTGTGTGGGG+GGG - chr8_3:14230199-14230218 Msa1278170:CDS 65.0%
GGTGTGTGTGTGTGTGGGGG+GGG - chr8_3:14230200-14230219 Msa1278170:CDS 65.0%
GTGTGTGTGTGTGTGGGGGG+GGG - chr8_3:14230201-14230220 Msa1278170:CDS 65.0%
TGTGTGTGTGTGTGGGGGGG+GGG - chr8_3:14230202-14230221 Msa1278170:CDS 65.0%
CTTGCCCCTAGCCGGAGTAG+AGG - chr8_3:14230557-14230576 Msa1278170:intron 65.0%
GGCGAGAAGTCCTAGGCTCG+CGG - chr8_3:14230679-14230698 Msa1278170:CDS 65.0%
ATCGTGCAAGCCGCGAGCCT+AGG + chr8_3:14230692-14230711 None:intergenic 65.0%
GCCAGTGACCGTTGGCGATG+TGG + chr8_3:14230834-14230853 None:intergenic 65.0%
GTGTGTGTGTGTGGGGGGGG+GGG - chr8_3:14230203-14230222 Msa1278170:CDS 70.0%
TGTGTGTGTGTGGGGGGGGG+GGG - chr8_3:14230204-14230223 Msa1278170:CDS 70.0%
GTGTGTGTGTGTGGGGGGGG+GGG - chr8_3:14230203-14230222 Msa1278170:CDS 70.0%
TGTGTGTGTGTGGGGGGGGG+GGG - chr8_3:14230204-14230223 Msa1278170:CDS 70.0%
GTGTGTGTGTGGGGGGGGGG+GGG - chr8_3:14230205-14230224 Msa1278170:CDS 75.0%
TGTGTGTGTGGGGGGGGGGG+GGG - chr8_3:14230206-14230225 Msa1278170:CDS 75.0%
GTGTGTGTGTGGGGGGGGGG+GGG - chr8_3:14230205-14230224 Msa1278170:CDS 75.0%
TGTGTGTGTGGGGGGGGGGG+GGG - chr8_3:14230206-14230225 Msa1278170:CDS 75.0%
! GTGTGTGTGGGGGGGGGGGG+GGG - chr8_3:14230207-14230226 Msa1278170:CDS 80.0%
! TGTGTGTGGGGGGGGGGGGG+GGG - chr8_3:14230208-14230227 Msa1278170:CDS 80.0%
! GTGTGTGTGGGGGGGGGGGG+GGG - chr8_3:14230207-14230226 Msa1278170:CDS 80.0%
! TGTGTGTGGGGGGGGGGGGG+GGG - chr8_3:14230208-14230227 Msa1278170:CDS 80.0%
! GTGTGTGGGGGGGGGGGGGG+GGG - chr8_3:14230209-14230228 Msa1278170:intron 85.0%
! TGTGTGGGGGGGGGGGGGGG+GGG - chr8_3:14230210-14230229 Msa1278170:intron 85.0%
! GTGTGTGGGGGGGGGGGGGG+GGG - chr8_3:14230209-14230228 Msa1278170:intron 85.0%
! TGTGTGGGGGGGGGGGGGGG+GGG - chr8_3:14230210-14230229 Msa1278170:intron 85.0%
! GTGTGGGGGGGGGGGGGGGG+GGG - chr8_3:14230211-14230230 Msa1278170:intron 90.0%
! TGTGGGGGGGGGGGGGGGGG+GGG - chr8_3:14230212-14230231 Msa1278170:intron 90.0%
! GTGTGGGGGGGGGGGGGGGG+GGG - chr8_3:14230211-14230230 Msa1278170:intron 90.0%
! TGTGGGGGGGGGGGGGGGGG+GGG - chr8_3:14230212-14230231 Msa1278170:intron 90.0%
! GTGGGGGGGGGGGGGGGGGG+GGG - chr8_3:14230213-14230232 Msa1278170:intron 95.0%
! TGGGGGGGGGGGGGGGGGGG+GGG - chr8_3:14230214-14230233 Msa1278170:intron 95.0%
! GTGGGGGGGGGGGGGGGGGG+GGG - chr8_3:14230213-14230232 Msa1278170:intron 95.0%
! TGGGGGGGGGGGGGGGGGGG+GGG - chr8_3:14230214-14230233 Msa1278170:intron 95.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 14227696 14231788 14227696 ID=Msa1278170;Name=Msa1278170
chr8_3 mRNA 14227696 14231788 14227696 ID=Msa1278170-mRNA-1;Parent=Msa1278170;Name=Msa1278170-mRNA-1;_AED=0.03;_eAED=0.03;_QI=198|0.6|0.66|1|1|1|6|439|593
chr8_3 exon 14227696 14228948 14227696 ID=Msa1278170-mRNA-1:exon:5591;Parent=Msa1278170-mRNA-1
chr8_3 exon 14229437 14229722 14229437 ID=Msa1278170-mRNA-1:exon:5590;Parent=Msa1278170-mRNA-1
chr8_3 exon 14229823 14229886 14229823 ID=Msa1278170-mRNA-1:exon:5589;Parent=Msa1278170-mRNA-1
chr8_3 exon 14229977 14230227 14229977 ID=Msa1278170-mRNA-1:exon:5588;Parent=Msa1278170-mRNA-1
chr8_3 exon 14230604 14230720 14230604 ID=Msa1278170-mRNA-1:exon:5587;Parent=Msa1278170-mRNA-1
chr8_3 exon 14231341 14231788 14231341 ID=Msa1278170-mRNA-1:exon:5586;Parent=Msa1278170-mRNA-1
chr8_3 five_prime_UTR 14231591 14231788 14231591 ID=Msa1278170-mRNA-1:five_prime_utr;Parent=Msa1278170-mRNA-1
chr8_3 CDS 14231341 14231590 14231341 ID=Msa1278170-mRNA-1:cds;Parent=Msa1278170-mRNA-1
chr8_3 CDS 14230604 14230720 14230604 ID=Msa1278170-mRNA-1:cds;Parent=Msa1278170-mRNA-1
chr8_3 CDS 14229977 14230227 14229977 ID=Msa1278170-mRNA-1:cds;Parent=Msa1278170-mRNA-1
chr8_3 CDS 14229823 14229886 14229823 ID=Msa1278170-mRNA-1:cds;Parent=Msa1278170-mRNA-1
chr8_3 CDS 14229437 14229722 14229437 ID=Msa1278170-mRNA-1:cds;Parent=Msa1278170-mRNA-1
chr8_3 CDS 14228135 14228948 14228135 ID=Msa1278170-mRNA-1:cds;Parent=Msa1278170-mRNA-1
chr8_3 three_prime_UTR 14227696 14228134 14227696 ID=Msa1278170-mRNA-1:three_prime_utr;Parent=Msa1278170-mRNA-1
Gene Sequence

>Msa1278170

ATGAAGGATTTGAATTCCGATCTGTTTGATCCGGTTACGGTGATGGAATCCGAATGGGCTCACGGTGGTTCTAGCTCCGACGCCGATTTCGGATTTGCTTTCAATGATAGTAATTTCTCTGATAGGGTTTTAAGGATTGAAATCATGGCCGATCCAGTTGATCCTCAACCTGATTCTGAAAATTGTACCTCTATTGCTGATTGGGCGAGGCATCGGAAGAGGAGACGTGAAGATATCAAGAAAGAAAACGTTGGGGATCTGCCAGATGAGCAGATTTTGAATGGGAACCAACCTGACATGGATGATTGTGTGGCTTCTGAAAATCAGGAGGAAGAAGTTGTTGCAATGGTTGAAGAATCCCCTTCTGGTGATGAGGCTGTAAATGACTTAGGTGATGAGGCTGTAAATGACTTAGGTGATGAGGCTGTTCATGACATGTCTGATTTTGAAAATGTGAACACGTCTGATTTTGAAAATGTTAACATAGGTGATGAGGCTGTAAATGACAATGATGAACCCAACCTGGGCATGGATTACTCTGAACCTGCAGTTGTTAGAGTTAAAACCCTACATATCAGTTCTCCGATCTTGGCTGCTAAAAGCCCTTTCTTCTATAAGCTTTTTTCGAATGGGATGAGGGAATCGGAACTGAGACATGTCACCCTCAGAATTAATGCTTCTGAAGAAGCTGCTCTCATGGAGCTACTAAACTTTATGTACAGTAACACATTGAGCATTAAGACAGCACCTGGTTTGCTGGATGTTTTGATGGCTGCCGATAAATTTGAAGTTGCTTCATGCATGAGATATTGTAGTCGGTTGTTGCGAAATATGCAAATGACACCTGAATCTGCATTGCTTTACCTGGAGCTGCCATCTAGTGTCTTAATGGCTGATGCAGTTCAACCACTAACTGATGCGGCAAAGCAGTATCTTGCTAGCCGATACAAGGATATAACCAAGCAAGTGTTCCAGGACGAGGTTATGAACTTGCCCCTAGCCGGAGTAGAGGCAATATTATCTAGTGATGATCTCCAGGTTGCATCAGAAGATGCTGTTTATGACTTTGTGCTGAAGTGGGCTAGACACCAGTACGGCAATCTGGAAGATAGGCGAGAAGTCCTAGGCTCGCGGCTTGCACGATTTATCCGCTTCCCTCATATGACCTGCCGAAAGCTTAAGAAGGTCTTAACCTGTAGTGACTTTGAACATGATGTTTCATCCAAGCTTGTCCTTGAGGCTCTATTTTTCAAGGCAGAGGTTCCACATCGCCAACGGTCACTGGCAGCTGAAGAGCCTGCTTGCTCAAGCCGTCGTTTCTTGGAGAGGGCATACAAATATCGTCCTGTCAAGGTGGTTGAATTTGAACTTCCACGCCAGCAGTGTGTAGTATATTTGGATCTAAAGCGGGAGGAGTGTTCCAATTTGTTCCCGTCTGGCCGGGTTTATTCTCAGGCATTTCACTTGGGTGGACAAGGGTTTTTTCTGTCAGCACATTGTAACATGGATCAACAAAGTTCTTTCCATTGCTTTGGGCTGTTTTTGGGAATGCAGGAAAAGGGATCAGTGAGCTTCACTGTGGACTATGAATTTGCGGCAAGGTCAAGACCAACAGAGGAGTTTGTTAGCAAATACAAAGGCAATTACACATTCACAGGTGGCAAGGCTGTTGGCTACAGAAACTTGTTTGCGATTCCATGGACTTCGTTCATGGCTGAGGATTGTCTTTACTTCATTAATGGCGTTCTGCACCTAAGGGCCGAGCTCACCATCAGACAGTGA
Protein sequence

>Msa1278170

MKDLNSDLFDPVTVMESEWAHGGSSSDADFGFAFNDSNFSDRVLRIEIMADPVDPQPDSENCTSIADWARHRKRRREDIKKENVGDLPDEQILNGNQPDMDDCVASENQEEEVVAMVEESPSGDEAVNDLGDEAVNDLGDEAVHDMSDFENVNTSDFENVNIGDEAVNDNDEPNLGMDYSEPAVVRVKTLHISSPILAAKSPFFYKLFSNGMRESELRHVTLRINASEEAALMELLNFMYSNTLSIKTAPGLLDVLMAADKFEVASCMRYCSRLLRNMQMTPESALLYLELPSSVLMADAVQPLTDAAKQYLASRYKDITKQVFQDEVMNLPLAGVEAILSSDDLQVASEDAVYDFVLKWARHQYGNLEDRREVLGSRLARFIRFPHMTCRKLKKVLTCSDFEHDVSSKLVLEALFFKAEVPHRQRSLAAEEPACSSRRFLERAYKYRPVKVVEFELPRQQCVVYLDLKREECSNLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFTVDYEFAARSRPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMAEDCLYFINGVLHLRAELTIRQ*