AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1282270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1282270 MtrunA17_Chr8g0353031 96.329 572 21 0 1 572 1 572 0.0 1139
Msa1282270 MtrunA17_Chr3g0082631 65.880 466 155 2 100 563 9 472 0.0 608
Msa1282270 MtrunA17_Chr4g0014841 48.987 543 243 8 19 550 30 549 2.15e-176 510
Msa1282270 MtrunA17_Chr4g0014871 48.619 543 248 7 19 550 31 553 6.74e-176 509
Msa1282270 MtrunA17_Chr3g0077151 48.059 541 248 7 19 551 29 544 9.03e-176 508
Msa1282270 MtrunA17_Chr4g0014781 48.435 543 248 8 19 550 30 551 3.72e-174 504
Msa1282270 MtrunA17_Chr4g0014801 48.708 542 246 7 20 550 31 551 1.42e-171 498
Msa1282270 MtrunA17_Chr4g0014791 48.250 543 247 6 19 550 30 549 1.43e-171 498
Msa1282270 MtrunA17_Chr3g0112611 43.750 560 287 7 22 566 36 582 5.53e-166 485
Msa1282270 MtrunA17_Chr7g0240381 40.411 584 310 6 3 570 17 578 2.05e-163 478
Msa1282270 MtrunA17_Chr3g0112671 42.419 554 282 7 20 556 35 568 6.17e-162 474
Msa1282270 MtrunA17_Chr4g0008651 40.949 569 294 7 22 564 38 590 9.55e-161 471
Msa1282270 MtrunA17_Chr7g0241741 42.210 552 294 6 20 555 24 566 3.51e-158 464
Msa1282270 MtrunA17_Chr3g0104011 43.750 560 280 9 20 557 24 570 2.37e-155 457
Msa1282270 MtrunA17_Chr8g0375311 41.712 549 292 9 22 551 44 583 5.04e-147 436
Msa1282270 MtrunA17_Chr4g0005901 41.049 553 293 6 20 552 34 573 2.55e-146 434
Msa1282270 MtrunA17_Chr4g0014861 49.423 433 196 8 121 550 16 428 7.04e-146 427
Msa1282270 MtrunA17_Chr3g0114501 42.650 551 287 8 19 551 23 562 1.92e-145 432
Msa1282270 MtrunA17_Chr7g0261791 39.726 584 298 9 19 567 30 594 1.22e-142 425
Msa1282270 MtrunA17_Chr7g0261811 40.395 557 288 7 19 549 28 566 6.59e-142 423
Msa1282270 MtrunA17_Chr8g0375291 41.929 539 285 8 22 541 44 573 7.22e-142 423
Msa1282270 MtrunA17_Chr7g0261881 39.350 554 300 6 19 550 28 567 2.95e-140 419
Msa1282270 MtrunA17_Chr8g0375351 39.455 550 305 7 22 552 44 584 7.05e-140 417
Msa1282270 MtrunA17_Chr1g0187241 40.642 561 293 7 19 555 27 571 1.03e-137 412
Msa1282270 MtrunA17_Chr8g0375341 38.909 550 308 7 22 552 44 584 1.19e-137 412
Msa1282270 MtrunA17_Chr8g0375361 40.614 554 295 7 20 551 41 582 1.73e-137 412
Msa1282270 MtrunA17_Chr8g0375321 39.781 548 302 7 22 550 41 579 4.47e-137 410
Msa1282270 MtrunA17_Chr7g0261771 39.024 574 303 8 19 566 32 584 8.71e-137 410
Msa1282270 MtrunA17_Chr8g0375331 40.727 550 296 9 22 551 28 567 1.93e-135 405
Msa1282270 MtrunA17_Chr7g0261851 39.828 580 305 8 19 572 29 590 4.65e-132 398
Msa1282270 MtrunA17_Chr1g0166791 38.172 558 311 6 19 555 25 569 1.67e-130 394
Msa1282270 MtrunA17_Chr3g0142091 39.091 550 296 9 22 551 30 560 4.88e-129 389
Msa1282270 MtrunA17_Chr3g0142101 38.148 540 299 6 22 544 39 560 1.86e-128 388
Msa1282270 MtrunA17_Chr5g0399061 38.163 566 315 7 19 562 28 580 3.46e-128 387
Msa1282270 MtrunA17_Chr5g0422881 36.602 571 326 7 20 566 22 580 2.09e-127 385
Msa1282270 MtrunA17_Chr1g0166711 39.068 558 305 6 19 555 26 569 9.92e-125 379
Msa1282270 MtrunA17_Chr1g0166741 38.278 546 289 8 9 531 21 541 1.03e-124 379
Msa1282270 MtrunA17_Chr7g0255621 36.833 562 326 7 20 560 22 575 9.45e-124 377
Msa1282270 MtrunA17_Chr7g0255611 37.213 567 319 9 20 561 31 585 9.89e-124 377
Msa1282270 MtrunA17_Chr7g0255601 36.364 583 338 8 1 561 13 584 5.38e-121 370
Msa1282270 MtrunA17_Chr4g0056431 38.732 568 312 9 19 562 26 581 1.59e-119 365
Msa1282270 MtrunA17_Chr1g0166771 38.224 518 279 7 37 533 10 507 3.32e-119 363
Msa1282270 MtrunA17_Chr5g0399071 36.684 567 326 8 16 562 25 578 4.44e-119 364
Msa1282270 MtrunA17_Chr7g0217461 36.364 572 319 8 20 560 26 583 5.98e-117 358
Msa1282270 MtrunA17_Chr6g0451841 36.022 558 303 14 25 556 12 541 1.38e-114 351
Msa1282270 MtrunA17_Chr7g0261661 40.275 437 238 6 118 549 34 452 3.43e-113 346
Msa1282270 MtrunA17_Chr4g0054891 34.452 566 332 8 22 563 114 664 1.73e-110 344
Msa1282270 MtrunA17_Chr7g0214731 34.991 583 329 10 19 564 62 631 2.36e-110 343
Msa1282270 MtrunA17_Chr7g0214461 33.511 564 337 9 20 563 80 625 3.57e-110 342
Msa1282270 MtrunA17_Chr5g0400371 32.982 570 348 9 20 565 114 673 2.56e-108 339
Msa1282270 MtrunA17_Chr1g0213711 32.206 562 339 8 19 557 22 564 1.67e-107 334
Msa1282270 MtrunA17_Chr5g0415791 35.385 585 341 9 1 557 10 585 3.91e-107 334
Msa1282270 MtrunA17_Chr4g0059991 33.051 590 356 9 1 564 8 584 1.60e-106 332
Msa1282270 MtrunA17_Chr4g0059981 33.045 578 341 8 23 564 36 603 7.56e-106 330
Msa1282270 MtrunA17_Chr7g0240271 33.333 576 342 11 15 561 19 581 3.83e-104 325
Msa1282270 MtrunA17_Chr7g0218851 33.868 561 331 9 20 558 48 590 1.12e-102 322
Msa1282270 MtrunA17_Chr4g0059971 32.432 555 341 8 23 551 39 585 4.23e-102 320
Msa1282270 MtrunA17_Chr7g0261751 38.445 463 241 8 19 437 32 494 2.30e-101 316
Msa1282270 MtrunA17_Chr2g0284701 32.639 576 346 9 20 560 34 602 3.18e-101 318
Msa1282270 MtrunA17_Chr3g0133341 34.336 565 319 10 20 556 16 556 6.11e-100 314
Msa1282270 MtrunA17_Chr1g0166731 39.220 436 250 5 121 555 45 466 1.35e-98 308
Msa1282270 MtrunA17_Chr8g0379971 32.929 577 334 9 20 550 22 591 3.54e-97 308
Msa1282270 MtrunA17_Chr4g0069581 36.492 496 274 12 76 551 44 518 7.53e-97 306
Msa1282270 MtrunA17_Chr5g0439381 34.507 568 314 10 19 559 29 565 1.40e-96 306
Msa1282270 MtrunA17_Chr8g0362781 32.343 572 345 9 9 551 24 582 2.99e-96 305
Msa1282270 MtrunA17_Chr8g0362711 32.504 563 331 8 20 550 26 571 1.11e-95 303
Msa1282270 MtrunA17_Chr5g0415961 31.972 563 335 9 20 550 26 572 1.53e-95 303
Msa1282270 MtrunA17_Chr2g0276751 32.971 552 317 9 22 550 42 563 2.98e-95 303
Msa1282270 MtrunA17_Chr7g0240281 30.731 602 374 9 2 572 5 594 5.12e-95 302
Msa1282270 MtrunA17_Chr8g0390331 31.926 592 350 12 9 567 6 577 6.53e-94 299
Msa1282270 MtrunA17_Chr4g0063591 34.155 568 333 11 19 563 23 572 9.45e-93 295
Msa1282270 MtrunA17_Chr1g0147631 31.570 567 344 8 20 560 27 575 9.76e-93 296
Msa1282270 MtrunA17_Chr1g0193391 29.623 584 369 10 1 565 1 561 1.04e-92 296
Msa1282270 MtrunA17_Chr4g0011471 32.331 532 319 9 40 545 38 554 1.25e-92 295
Msa1282270 MtrunA17_Chr8g0379991 32.867 572 314 11 40 550 2 564 6.09e-91 291
Msa1282270 MtrunA17_Chr7g0271221 31.424 576 351 10 1 556 1 552 7.43e-91 291
Msa1282270 MtrunA17_Chr4g0060001 32.787 549 324 10 17 537 28 559 1.60e-89 288
Msa1282270 MtrunA17_Chr2g0331521 31.497 581 349 12 11 561 14 575 1.27e-88 285
Msa1282270 MtrunA17_Chr3g0112631 45.161 279 150 2 280 556 3 280 2.47e-87 272
Msa1282270 MtrunA17_Chr4g0011041 29.286 560 353 12 20 552 38 581 3.75e-84 273
Msa1282270 MtrunA17_Chr7g0235521 33.867 437 267 8 120 547 33 456 1.59e-83 268
Msa1282270 MtrunA17_Chr4g0003761 30.442 565 345 9 6 541 18 563 5.33e-83 271
Msa1282270 MtrunA17_Chr2g0331511 32.117 548 334 8 15 537 18 552 9.27e-83 271
Msa1282270 MtrunA17_Chr7g0240181 33.638 437 268 8 120 547 33 456 1.49e-82 266
Msa1282270 MtrunA17_Chr7g0240131 33.638 437 268 8 120 547 33 456 1.78e-82 266
Msa1282270 MtrunA17_Chr7g0240211 33.638 437 268 8 120 547 33 456 1.82e-82 266
Msa1282270 MtrunA17_Chr2g0331481 32.482 548 328 9 21 541 28 560 1.59e-81 268
Msa1282270 MtrunA17_Chr2g0331471 32.731 553 322 11 20 541 90 623 8.46e-81 267
Msa1282270 MtrunA17_Chr2g0326211 30.716 573 345 12 3 552 6 549 1.63e-80 263
Msa1282270 MtrunA17_Chr5g0415841 34.803 431 255 6 129 550 46 459 4.69e-80 259
Msa1282270 MtrunA17_Chr8g0362801 34.368 451 273 7 120 561 37 473 5.23e-79 257
Msa1282270 MtrunA17_Chr1g0177591 31.397 551 333 12 10 541 34 558 1.21e-78 258
Msa1282270 MtrunA17_Chr7g0240151 32.339 436 257 8 120 547 33 438 5.18e-76 248
Msa1282270 MtrunA17_Chr2g0331461 30.517 580 342 9 21 561 28 585 7.27e-76 253
Msa1282270 MtrunA17_Chr7g0261731 40.299 335 156 6 19 327 32 348 1.84e-75 243
Msa1282270 MtrunA17_Chr1g0157601 27.193 570 368 9 6 547 3 553 4.22e-75 249
Msa1282270 MtrunA17_Chr1g0157621 28.913 543 344 12 43 561 5 529 6.04e-72 240
Msa1282270 MtrunA17_Chr2g0325961 29.319 573 354 10 3 552 6 550 8.91e-71 237
Msa1282270 MtrunA17_Chr2g0325951 28.943 577 350 13 3 552 6 549 1.23e-70 236
Msa1282270 MtrunA17_Chr1g0157611 28.142 565 363 12 21 560 19 565 2.45e-70 236
Msa1282270 MtrunA17_Chr1g0177611 32.080 452 274 11 99 541 2 429 9.93e-69 229
Msa1282270 MtrunA17_Chr1g0177631 32.151 451 275 9 99 541 2 429 2.33e-67 225
Msa1282270 MtrunA17_Chr3g0142121 39.015 264 149 2 281 544 11 262 3.73e-65 214
Msa1282270 MtrunA17_Chr4g0060071 38.989 277 157 6 276 550 32 298 2.36e-58 197
Msa1282270 MtrunA17_Chr3g0142111 38.516 283 151 4 22 287 50 326 1.57e-55 191
Msa1282270 MtrunA17_Chr7g0261721 39.437 213 127 2 350 561 1 212 9.30e-50 172
Msa1282270 MtrunA17_Chr7g0234151 27.438 441 254 12 119 545 28 416 3.13e-46 167
Msa1282270 MtrunA17_Chr7g0234381 25.874 429 276 7 119 545 28 416 5.41e-46 167
Msa1282270 MtrunA17_Chr7g0234181 26.545 437 263 10 119 545 23 411 2.24e-45 165
Msa1282270 MtrunA17_Chr3g0112651 45.161 124 68 0 118 241 49 172 3.15e-33 126
Msa1282270 MtrunA17_Chr1g0147591 32.524 206 114 5 128 324 9 198 4.49e-29 114
Msa1282270 MtrunA17_Chr3g0112661 46.667 105 56 0 20 124 33 137 2.67e-26 104
Msa1282270 MtrunA17_Chr7g0261831 37.126 167 81 4 228 388 1 149 3.52e-26 106
Msa1282270 MtrunA17_Chr3g0082621 68.056 72 23 0 33 104 1 72 6.30e-26 101
Msa1282270 MtrunA17_Chr4g0014851 58.889 90 36 1 19 107 31 120 5.55e-25 101
Msa1282270 MtrunA17_Chr2g0326221 28.837 215 116 5 342 552 44 225 1.06e-21 94.0
Msa1282270 MtrunA17_Chr4g0060061 38.739 111 68 0 121 231 18 128 7.61e-21 89.0
Msa1282270 MtrunA17_Chr1g0166721 44.000 100 53 2 19 118 26 122 1.38e-18 82.8
Msa1282270 MtrunA17_Chr7g0261671 43.023 86 49 0 19 104 33 118 1.17e-16 76.3
Msa1282270 MtrunA17_Chr1g0147581 30.833 120 78 1 404 523 1 115 4.01e-13 66.2
Msa1282270 MtrunA17_Chr7g0240141 34.783 92 58 1 15 104 22 113 2.17e-11 61.2
Msa1282270 MtrunA17_Chr7g0240221 33.696 92 59 1 15 104 22 113 7.98e-11 59.7
Msa1282270 MtrunA17_Chr7g0240191 33.696 92 59 1 15 104 22 113 7.98e-11 59.7
Msa1282270 MtrunA17_Chr7g0240161 33.696 92 59 1 15 104 22 113 7.98e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1282270 AT3G54450.1 55.735 558 238 6 8 561 2 554 0.0 654
Msa1282270 AT1G72125.1 44.846 553 260 6 22 553 31 559 2.56e-162 474
Msa1282270 AT1G22540.1 46.112 553 254 9 19 553 29 555 1.14e-161 473
Msa1282270 AT3G53960.1 42.408 573 287 10 3 552 23 575 2.54e-160 471
Msa1282270 AT1G72120.1 44.765 554 261 9 19 553 28 555 1.98e-159 467
Msa1282270 AT2G37900.1 41.935 558 280 9 20 556 38 572 1.45e-156 460
Msa1282270 AT3G54140.1 42.134 553 293 6 20 554 24 567 5.12e-152 449
Msa1282270 AT3G54140.2 42.134 553 293 6 20 554 24 567 5.12e-152 449
Msa1282270 AT5G01180.2 41.727 556 290 8 20 554 25 567 2.93e-151 447
Msa1282270 AT5G01180.3 41.727 556 290 8 20 554 25 567 2.93e-151 447
Msa1282270 AT5G01180.1 41.727 556 290 8 20 554 25 567 2.93e-151 447
Msa1282270 AT1G22550.1 42.215 578 283 7 1 553 11 562 4.11e-151 446
Msa1282270 AT1G72140.1 42.755 559 256 8 19 551 33 553 2.50e-147 436
Msa1282270 AT1G72130.1 42.674 546 265 8 21 553 26 536 4.23e-145 430
Msa1282270 AT1G22570.1 41.349 578 289 6 1 553 11 563 1.75e-144 429
Msa1282270 AT2G02040.1 41.293 557 291 9 20 553 41 584 2.32e-142 424
Msa1282270 AT1G22570.2 41.941 546 267 6 33 553 6 526 7.25e-140 416
Msa1282270 AT2G37900.2 41.165 515 259 9 63 556 2 493 1.30e-139 414
Msa1282270 AT1G62200.1 39.856 557 294 8 17 551 49 586 5.54e-138 413
Msa1282270 AT2G40460.1 42.446 556 279 10 19 553 23 558 2.82e-136 409
Msa1282270 AT5G46040.1 38.899 563 310 5 19 561 26 574 2.14e-133 401
Msa1282270 AT5G46050.1 39.700 534 281 5 21 530 28 544 5.16e-133 400
Msa1282270 AT1G62200.2 38.554 581 297 9 17 551 49 615 1.50e-132 400
Msa1282270 AT1G62200.3 38.554 581 297 9 17 551 63 629 1.89e-132 400
Msa1282270 AT2G02020.1 38.069 549 275 7 22 552 44 545 9.70e-127 383
Msa1282270 AT1G68570.1 39.459 555 307 8 21 553 24 571 1.36e-125 382
Msa1282270 AT1G68570.2 39.668 542 298 7 34 553 7 541 3.79e-124 377
Msa1282270 AT5G14940.1 36.477 562 311 12 20 556 7 547 5.70e-117 358
Msa1282270 AT3G01350.1 36.268 568 318 10 21 559 8 560 1.06e-115 355
Msa1282270 AT5G13400.1 35.106 564 331 8 19 556 63 617 4.46e-113 350
Msa1282270 AT1G72130.2 40.682 440 222 7 118 553 14 418 7.87e-113 343
Msa1282270 AT1G72130.3 40.682 440 222 7 118 553 14 418 7.87e-113 343
Msa1282270 AT1G32450.1 33.972 574 345 10 19 566 36 601 4.46e-112 347
Msa1282270 AT1G12110.1 36.462 554 322 8 19 551 26 570 3.11e-109 339
Msa1282270 AT1G69870.1 35.018 554 327 6 20 550 51 594 3.58e-109 340
Msa1282270 AT5G46050.2 40.225 445 245 4 121 561 36 463 5.97e-108 332
Msa1282270 AT1G59740.1 34.353 556 313 9 19 545 40 572 2.47e-104 327
Msa1282270 AT2G26690.1 35.501 569 322 11 19 562 23 571 5.22e-104 325
Msa1282270 AT1G18880.1 33.216 569 341 6 23 563 22 579 2.11e-103 324
Msa1282270 AT4G21680.1 33.571 560 333 9 22 554 30 577 8.90e-103 322
Msa1282270 AT2G26690.2 35.315 555 314 11 33 562 4 538 4.17e-100 314
Msa1282270 AT5G19640.1 32.686 566 330 11 21 564 60 596 4.40e-100 316
Msa1282270 AT1G69850.1 34.452 566 325 10 20 550 25 579 6.05e-98 310
Msa1282270 AT1G52190.1 32.639 576 337 10 1 541 1 560 1.15e-97 310
Msa1282270 AT2G26690.3 35.413 545 307 11 43 562 2 526 1.64e-97 307
Msa1282270 AT1G27040.2 35.572 551 317 9 20 549 23 556 1.23e-96 306
Msa1282270 AT1G27040.1 35.572 551 317 9 20 549 27 560 1.40e-96 306
Msa1282270 AT1G33440.1 35.262 553 302 13 19 542 37 562 1.42e-96 306
Msa1282270 AT3G16180.1 32.226 602 351 10 1 561 1 586 3.15e-94 300
Msa1282270 AT3G21670.1 35.116 561 305 13 19 550 28 558 4.40e-94 300
Msa1282270 AT1G27040.3 35.502 538 309 9 33 549 8 528 1.32e-93 297
Msa1282270 AT5G62680.1 31.699 571 344 11 23 561 46 602 4.48e-90 290
Msa1282270 AT5G62730.1 33.031 551 336 12 20 554 56 589 1.97e-88 285
Msa1282270 AT1G27080.1 31.349 571 342 10 20 563 14 561 7.88e-88 283
Msa1282270 AT5G62730.2 33.028 545 332 12 26 554 3 530 1.65e-87 281
Msa1282270 AT5G28470.2 31.429 560 339 11 2 537 5 543 1.03e-86 280
Msa1282270 AT3G47960.1 29.821 560 358 7 23 556 64 614 2.40e-86 281
Msa1282270 AT5G28470.1 31.250 560 338 12 2 537 5 541 1.13e-83 271
Msa1282270 AT1G69860.1 30.245 572 356 8 7 556 5 555 1.52e-82 268
Msa1282270 AT3G45660.1 31.414 573 327 14 17 559 18 554 1.90e-81 266
Msa1282270 AT3G45660.3 31.414 573 327 14 17 559 18 554 1.90e-81 266
Msa1282270 AT3G45660.2 31.414 573 327 14 17 559 39 575 5.66e-81 265
Msa1282270 AT1G27080.2 31.111 540 322 10 51 563 3 519 6.84e-81 264
Msa1282270 AT3G45650.1 30.637 581 346 13 1 556 1 549 6.86e-80 261
Msa1282270 AT3G45720.1 30.087 575 329 12 19 561 18 551 3.98e-77 254
Msa1282270 AT3G45680.1 28.183 589 365 12 1 564 1 556 1.11e-75 251
Msa1282270 AT3G45700.1 28.696 575 354 11 1 556 1 538 9.86e-75 248
Msa1282270 AT3G25260.1 29.889 542 315 10 20 545 21 513 1.81e-74 246
Msa1282270 AT3G45650.2 29.325 607 346 14 1 556 1 575 2.29e-74 248
Msa1282270 AT3G45710.1 27.350 585 369 11 1 560 1 554 1.36e-73 245
Msa1282270 AT3G25280.1 28.571 539 332 9 20 545 21 519 4.91e-68 229
Msa1282270 AT3G45690.1 26.549 565 324 12 18 561 16 510 5.12e-63 216
Msa1282270 AT2G38100.2 28.625 531 326 15 48 561 2 496 3.17e-56 197
Msa1282270 AT2G38100.3 28.625 531 326 15 48 561 24 518 7.38e-56 197
Msa1282270 AT2G38100.1 28.625 531 326 15 48 561 18 512 8.90e-56 196
Msa1282270 AT2G02020.2 35.739 291 170 1 22 295 44 334 1.28e-51 185
Msa1282270 AT2G02020.2 39.269 219 128 4 335 552 310 524 7.36e-46 169
Msa1282270 AT5G11570.1 25.853 557 309 14 11 547 4 476 4.07e-45 166

Find 145 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGTACTATGTTTGGATTT+TGG 0.145938 8_3:-22559573 None:intergenic
CACACCTTGATGATTATTAT+TGG 0.205565 8_3:+22566406 Msa1282270:CDS
TGTGTTAAGTGCTGTTAATT+TGG 0.220123 8_3:+22566437 Msa1282270:CDS
AAAGGAGCACTACTAGAAAT+TGG 0.235775 8_3:-22559535 None:intergenic
CAATCCTACCAATGTATATT+TGG 0.248593 8_3:+22566154 Msa1282270:CDS
CCATCACTCCACAACCAAAA+AGG 0.253088 8_3:+22559760 Msa1282270:CDS
GGCATTGGCACTCTTCCTAT+TGG 0.263753 8_3:+22564543 Msa1282270:CDS
AGGATGTTTGGGTCTTATAT+AGG 0.278963 8_3:-22559606 None:intergenic
TGCAACACGGTTATCCCATT+TGG 0.279245 8_3:-22566018 None:intergenic
GTCTTATATAGGGAAAATTA+TGG 0.289839 8_3:-22559595 None:intergenic
TGGAGCAGTGTATGATATTT+AGG 0.292171 8_3:-22564736 None:intergenic
GTTGGGTGGGGTGTGGGGTT+AGG 0.297522 8_3:+22564496 Msa1282270:CDS
ACTTGGGCCAGTCTTGTAAA+TGG 0.307105 8_3:-22564604 None:intergenic
GGACAATGTTGGGTGGGGTG+TGG 0.309070 8_3:+22564489 Msa1282270:intron
ATTAAACAAGTTAGCCATAT+AGG 0.314782 8_3:-22565805 None:intergenic
TTAAACAAGTTAGCCATATA+GGG 0.321817 8_3:-22565804 None:intergenic
GACAATGTTGGGTGGGGTGT+GGG 0.321840 8_3:+22564490 Msa1282270:CDS
GCCGGATGGATTGAGAAGTT+TGG 0.329089 8_3:+22566260 Msa1282270:CDS
TTCATAGCTGATTCATATCT+TGG 0.330954 8_3:+22560133 Msa1282270:CDS
GTGTTAAGTGCTGTTAATTT+GGG 0.332355 8_3:+22566438 Msa1282270:CDS
CTCTTAGCATCCTTCTCTTC+CGG 0.334697 8_3:-22562692 None:intergenic
ACGAAGACTCGGTCGTATAT+TGG 0.344839 8_3:-22565967 None:intergenic
AAGTTTGAACACAAGGCTTA+TGG 0.351768 8_3:-22562640 None:intergenic
ACACCTTGATGATTATTATT+GGG 0.352520 8_3:+22566407 Msa1282270:CDS
TCTCTTAGTCATGGTCATAT+TGG 0.356804 8_3:-22559484 None:intergenic
GGATGTTTGGGTCTTATATA+GGG 0.358242 8_3:-22559605 None:intergenic
TGATGATTATTATTGGGTTA+TGG 0.358619 8_3:+22566413 Msa1282270:CDS
TAAGAACATGATTGTTACTT+TGG 0.360556 8_3:+22566703 Msa1282270:three_prime_UTR
GCATTGGCACTCTTCCTATT+GGG 0.365353 8_3:+22564544 Msa1282270:CDS
TCCTCACTATTCCCTTTGCT+TGG 0.365982 8_3:+22560106 Msa1282270:CDS
AAGGAGCACTACTAGAAATT+GGG 0.368703 8_3:-22559534 None:intergenic
CCGGATGGATTGAGAAGTTT+GGG 0.370689 8_3:+22566261 Msa1282270:CDS
AATTATGGGAGTACTATGTT+TGG 0.371072 8_3:-22559580 None:intergenic
TTGGGCTATCTGCCATGATT+TGG 0.371956 8_3:-22559712 None:intergenic
ACAATGTTGGGTGGGGTGTG+GGG 0.374470 8_3:+22564491 Msa1282270:CDS
GCAACACGGTTATCCCATTT+GGG 0.378471 8_3:-22566017 None:intergenic
AGAAGTAACCAAGAGGGTTC+TGG 0.380275 8_3:+22566516 Msa1282270:CDS
TTCTTCGTCTAATCCCTATA+TGG 0.387549 8_3:+22565791 Msa1282270:CDS
TAGTTTACCTGAAGATATAC+TGG 0.387756 8_3:-22562776 None:intergenic
TGGTACTTGGGCATTGTGGC+TGG 0.394291 8_3:+22562731 Msa1282270:CDS
TATACTCACAATGGTTGTTT+CGG 0.398118 8_3:+22566068 Msa1282270:CDS
CATCTTTCTCCTCTTCACTA+TGG 0.400638 8_3:-22564690 None:intergenic
TTCCCTCCAGCATCACTTCA+AGG 0.400965 8_3:+22565913 Msa1282270:CDS
GTCTTCACTCATTTATCTTG+TGG 0.402311 8_3:+22560177 Msa1282270:CDS
GGGTGTGGGGTTAGGAGTAT+TGG 0.406293 8_3:+22564504 Msa1282270:CDS
TACAGAAAGGAAAGCCCTAC+AGG 0.407761 8_3:+22564577 Msa1282270:CDS
CGGCTCTTGTAGAAACGAAA+AGG 0.407993 8_3:+22566088 Msa1282270:CDS
GGCTGGGAGATAACATCAAT+AGG 0.412997 8_3:+22566382 Msa1282270:CDS
GGCTATCTGCCATGATTTGG+TGG 0.414389 8_3:-22559709 None:intergenic
TCACTATTCCCTTTGCTTGG+TGG 0.418464 8_3:+22560109 Msa1282270:CDS
AATTATAGTAGCATTATCTA+TGG 0.422696 8_3:-22566594 None:intergenic
AGTAAACGCATCAGAGATTC+CGG 0.425457 8_3:-22566202 None:intergenic
AAATTCACCGGTCACCCAAA+TGG 0.425786 8_3:+22566003 Msa1282270:CDS
AATGAGTGAAGACAAGAGTA+TGG 0.428043 8_3:-22560167 None:intergenic
GAGATTTGCATACCAAGGTT+TGG 0.431626 8_3:+22559997 Msa1282270:CDS
TGGGGTGTGGGGATGAGAAA+AGG 0.434894 8_3:-22559553 None:intergenic
TATATAAGTATAGTAGGAGT+TGG 0.438611 8_3:+22566294 Msa1282270:CDS
CATTATAATTGAAGTTATTG+AGG 0.442287 8_3:+22566332 Msa1282270:CDS
GCACTTTATGTGCTTTCCAT+TGG 0.444806 8_3:+22562608 Msa1282270:CDS
CTCTTTCTATCTCTTAGTCA+TGG 0.448007 8_3:-22559493 None:intergenic
CCCACCTATACTGATTTGTA+TGG 0.449414 8_3:-22564756 None:intergenic
TTAATTTGGGTGTTTATATG+TGG 0.449648 8_3:+22566451 Msa1282270:CDS
TTGTCGCCGCAGTTCGTAAG+TGG 0.454861 8_3:+22564629 Msa1282270:CDS
TCTGATGCGTTTACTATCGT+TGG 0.456665 8_3:+22566210 Msa1282270:CDS
AGGAGTGTTGGCATTGGCAT+TGG 0.457677 8_3:+22564528 Msa1282270:CDS
GGCTACAATAGATATCGTTC+TGG 0.462037 8_3:+22566537 Msa1282270:CDS
GTTTATACCAGTATATCTTC+AGG 0.469782 8_3:+22562769 Msa1282270:CDS
AATTCACCGGTCACCCAAAT+GGG 0.480800 8_3:+22566004 Msa1282270:CDS
GGTTATCCCATTTGGGTGAC+CGG 0.488655 8_3:-22566010 None:intergenic
TAGCAAGTGGCACGAAGACT+CGG 0.490850 8_3:-22565978 None:intergenic
GCGGCGTATATAAGTATAGT+AGG 0.493249 8_3:+22566288 Msa1282270:CDS
GGCTCTTGTAGAAACGAAAA+GGG 0.495860 8_3:+22566089 Msa1282270:CDS
GGTTGTGGAGTGATGGATGA+GGG 0.501318 8_3:-22559753 None:intergenic
TATTGTAGCCAGAACCCTCT+TGG 0.501499 8_3:-22566524 None:intergenic
CCCAAACTTCTCAATCCATC+CGG 0.503248 8_3:-22566261 None:intergenic
TCCTACCAATGTATATTTGG+TGG 0.507777 8_3:+22566157 Msa1282270:CDS
ACGAGGCCTTGAAGTGATGC+TGG 0.507942 8_3:-22565919 None:intergenic
AGGAGTATTGGCAGGAGTGT+TGG 0.511573 8_3:+22564516 Msa1282270:CDS
TCTTATATAGGGAAAATTAT+GGG 0.512640 8_3:-22559594 None:intergenic
CGTGTCGTCGTCGAACTGAT+CGG 0.522709 8_3:-22562669 None:intergenic
CTTGTAAATGGACTCCCTGT+AGG 0.524715 8_3:-22564592 None:intergenic
CGTATATTGGAACAACGAAA+AGG 0.524827 8_3:-22565954 None:intergenic
GTGCAAAAGCTGGTGAGAAA+TGG 0.525884 8_3:+22566361 Msa1282270:CDS
CAAAACTCACCACCAAATCA+TGG 0.526335 8_3:+22559700 Msa1282270:exon
TGGTTGTGGAGTGATGGATG+AGG 0.528098 8_3:-22559754 None:intergenic
TCTTCCTATTGGGAATCAAA+AGG 0.529313 8_3:+22564554 Msa1282270:CDS
CGACGACACGCCGGAAGAGA+AGG 0.536664 8_3:+22562682 Msa1282270:CDS
TAACCCAATAATAATCATCA+AGG 0.540319 8_3:-22566410 None:intergenic
CTATGAAGCCACCAAGCAAA+GGG 0.542359 8_3:-22560117 None:intergenic
TTTCTTGACACTTTCAGTGT+CGG 0.543156 8_3:+22562556 Msa1282270:CDS
AGTAGCATTATCTATGGCAA+AGG 0.544789 8_3:-22566588 None:intergenic
ATAACCGTGTTGCAAAGAAT+CGG 0.549285 8_3:+22566027 Msa1282270:CDS
GTGCTTTCCATTGGTGAAGG+AGG 0.549336 8_3:+22562617 Msa1282270:CDS
TTGTAAATGGACTCCCTGTA+GGG 0.551151 8_3:-22564591 None:intergenic
AGGGAGTCCATTTACAAGAC+TGG 0.553305 8_3:+22564597 Msa1282270:CDS
AATTCAGGACAATGTTGGGT+GGG 0.554992 8_3:+22564483 Msa1282270:intron
TATGTGCTTTCCATTGGTGA+AGG 0.555245 8_3:+22562614 Msa1282270:CDS
CTTCCTCAATATATGATCAC+CGG 0.558388 8_3:+22566183 Msa1282270:CDS
GAACTTACATATGATGAAGA+TGG 0.559904 8_3:-22559798 None:intergenic
CACACATATTTCACTAAACA+AGG 0.560013 8_3:+22565853 Msa1282270:CDS
CAAACAAAACAAGAAATCCA+TGG 0.560424 8_3:+22565728 Msa1282270:CDS
ATTGGCAGGAGTGTTGGCAT+TGG 0.560470 8_3:+22564522 Msa1282270:CDS
AAAAGCTGGTGAGAAATGGC+TGG 0.563538 8_3:+22566365 Msa1282270:CDS
GCTGGGAGATAACATCAATA+GGG 0.567059 8_3:+22566383 Msa1282270:CDS
TGAGATTTGATGCCAAACCT+TGG 0.567641 8_3:-22560009 None:intergenic
GTCACTGAACATAATCTCCA+TGG 0.569399 8_3:-22565745 None:intergenic
AGGAGCACTACTAGAAATTG+GGG 0.577948 8_3:-22559533 None:intergenic
GCTATGAAGCCACCAAGCAA+AGG 0.578420 8_3:-22560118 None:intergenic
TGCTCCATACAAATCAGTAT+AGG 0.578994 8_3:+22564752 Msa1282270:CDS
GGGAATCAAAAGGTACAGAA+AGG 0.580406 8_3:+22564564 Msa1282270:CDS
ATTCAGGACAATGTTGGGTG+GGG 0.582595 8_3:+22564484 Msa1282270:intron
GCTGAGAGATTTGCATACCA+AGG 0.590021 8_3:+22559992 Msa1282270:CDS
GAGGCAATTAGTGCAAAAGC+TGG 0.594052 8_3:+22566351 Msa1282270:CDS
GGCCTTGAAGTGATGCTGGA+GGG 0.597498 8_3:-22565915 None:intergenic
GTGTTGCAAAGAATCGGAGT+TGG 0.599308 8_3:+22566033 Msa1282270:CDS
CTTATGGCCTCCTTCACCAA+TGG 0.600332 8_3:-22562624 None:intergenic
ATTGAGAAGTTTGGGAGCCG+CGG 0.601324 8_3:+22566269 Msa1282270:CDS
GTGGGGTTAGGAGTATTGGC+AGG 0.603352 8_3:+22564508 Msa1282270:CDS
GTTAATGTTGCTAAAAGTCA+CGG 0.605449 8_3:+22566111 Msa1282270:CDS
ATTCCGGTGATCATATATTG+AGG 0.606762 8_3:-22566186 None:intergenic
AAATTCAGGACAATGTTGGG+TGG 0.606854 8_3:+22564482 Msa1282270:intron
AACTCCGATTCTTTGCAACA+CGG 0.606929 8_3:-22566031 None:intergenic
GCGGCGAAAGTTTGAACACA+AGG 0.613912 8_3:-22562647 None:intergenic
AGGCCTTGAAGTGATGCTGG+AGG 0.615708 8_3:-22565916 None:intergenic
AGCAACCACCAAATATACAT+TGG 0.617337 8_3:-22566162 None:intergenic
TTCTGGAGTGTAGTAAAACA+AGG 0.625507 8_3:+22566554 Msa1282270:exon
TTTAGTGATGATAATGTTGG+GGG 0.628840 8_3:-22559646 None:intergenic
ACCACCAAATATACATTGGT+AGG 0.629861 8_3:-22566158 None:intergenic
GGTCGAACATGAACATGATG+AGG 0.633947 8_3:-22564715 None:intergenic
ACAGAAAGGAAAGCCCTACA+GGG 0.634031 8_3:+22564578 Msa1282270:CDS
CCACTTGCTAGAAAATTCAC+CGG 0.636988 8_3:+22565991 Msa1282270:CDS
GACTAAGAGATAGAAAGAGA+AGG 0.637674 8_3:+22559497 Msa1282270:five_prime_UTR
TTGGTGGTACTTGGGCATTG+TGG 0.645431 8_3:+22562727 Msa1282270:CDS
GTCGTCGTCGAACTGATCGG+CGG 0.646189 8_3:-22562666 None:intergenic
GGCACATTAATCCATACCCT+AGG 0.652827 8_3:+22565877 Msa1282270:CDS
AAAGCTGGTGAGAAATGGCT+GGG 0.657245 8_3:+22566366 Msa1282270:CDS
CACGCGCCACTTACGAACTG+CGG 0.659002 8_3:-22564635 None:intergenic
GATGAAAGAAGTAACCAAGA+GGG 0.661163 8_3:+22566510 Msa1282270:CDS
GCATCACTTCAAGGCCTCGT+CGG 0.670950 8_3:+22565922 Msa1282270:CDS
ACCAAGCAAAGGGAATAGTG+AGG 0.678777 8_3:-22560107 None:intergenic
TCAGTTCGACGACGACACGC+CGG 0.683054 8_3:+22562673 Msa1282270:CDS
AGATGAAAGAAGTAACCAAG+AGG 0.693348 8_3:+22566509 Msa1282270:CDS
TACTATACTTATATACGCCG+CGG 0.710647 8_3:-22566286 None:intergenic
ACATATTTCACTAAACAAGG+TGG 0.717850 8_3:+22565856 Msa1282270:CDS
AAAGGATCGTGACTCCGACG+AGG 0.738339 8_3:-22565936 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTATATGATATAATATAAAA+AGG - chr8_3:22559961-22559980 None:intergenic 10.0%
!! TATACATTAGTTAAAAAATA+TGG - chr8_3:22561401-22561420 None:intergenic 10.0%
!! TAGATAATTAAAGTTATTAA+CGG + chr8_3:22561494-22561513 Msa1282270:intron 10.0%
!! AAAATTATATGGTTTAATTA+GGG - chr8_3:22562187-22562206 None:intergenic 10.0%
!! AAAAATTATATGGTTTAATT+AGG - chr8_3:22562188-22562207 None:intergenic 10.0%
!! ACTAATATATTAATTAAGTT+GGG - chr8_3:22562212-22562231 None:intergenic 10.0%
!! TACTAATATATTAATTAAGT+TGG - chr8_3:22562213-22562232 None:intergenic 10.0%
!!! TTATTTTATTAGTTGAAATT+TGG - chr8_3:22564274-22564293 None:intergenic 10.0%
!!! ATAAATAAATAGTTTTGATT+GGG - chr8_3:22565194-22565213 None:intergenic 10.0%
!! GATCAATTATATAATGAAAA+GGG - chr8_3:22559837-22559856 None:intergenic 15.0%
!! TGATCAATTATATAATGAAA+AGG - chr8_3:22559838-22559857 None:intergenic 15.0%
!! CAATTACATGATTAAAAAAT+GGG - chr8_3:22559930-22559949 None:intergenic 15.0%
!! TCAATTACATGATTAAAAAA+TGG - chr8_3:22559931-22559950 None:intergenic 15.0%
!! TATATTATATCATATAGTTG+TGG + chr8_3:22559964-22559983 Msa1282270:intron 15.0%
!!! TTTATTGATTGTAATTAATG+CGG - chr8_3:22561122-22561141 None:intergenic 15.0%
!! AAATTAAAGATAGATATCAT+AGG - chr8_3:22561612-22561631 None:intergenic 15.0%
!! AGGTTAAAAATTAAGTATAA+AGG - chr8_3:22562035-22562054 None:intergenic 15.0%
!! AAAAATATTCTTAATTGAAG+GGG - chr8_3:22562098-22562117 None:intergenic 15.0%
!! CAAAAATATTCTTAATTGAA+GGG - chr8_3:22562099-22562118 None:intergenic 15.0%
!! TCAAAAATATTCTTAATTGA+AGG - chr8_3:22562100-22562119 None:intergenic 15.0%
!!! CTAATATATTAATTAAGTTG+GGG - chr8_3:22562211-22562230 None:intergenic 15.0%
!! AGAAAATATGATATTATGAT+GGG - chr8_3:22562275-22562294 None:intergenic 15.0%
!! AAGAAAATATGATATTATGA+TGG - chr8_3:22562276-22562295 None:intergenic 15.0%
!! AAAAATTATTCACATAAAGT+TGG - chr8_3:22562302-22562321 None:intergenic 15.0%
!! CAAAGAATTTCTTTATATTA+AGG - chr8_3:22563399-22563418 None:intergenic 15.0%
!!! ACAAATTAAGTTGTTTATTA+CGG - chr8_3:22563433-22563452 None:intergenic 15.0%
!!! AAGTTTTTTACATTTTTTTC+TGG + chr8_3:22563715-22563734 Msa1282270:intron 15.0%
!!! GATTTTTATTTATAAAAGAC+TGG + chr8_3:22563945-22563964 Msa1282270:intron 15.0%
!! ATGTATGATTCTAATTATAA+TGG + chr8_3:22564416-22564435 Msa1282270:intron 15.0%
!!! TAATTTAAAGTTAGAAAGAA+TGG - chr8_3:22564784-22564803 None:intergenic 15.0%
!! TGAAATGAATATATTAACAA+AGG - chr8_3:22564808-22564827 None:intergenic 15.0%
!!! CATAAATAAATAGTTTTGAT+TGG - chr8_3:22565195-22565214 None:intergenic 15.0%
!!! TTTAATAGGTTAATTTGTTA+TGG + chr8_3:22565492-22565511 Msa1282270:intron 15.0%
!!! TTAATAGGTTAATTTGTTAT+GGG + chr8_3:22565493-22565512 Msa1282270:intron 15.0%
!! TCTTATATAGGGAAAATTAT+GGG - chr8_3:22559597-22559616 None:intergenic 20.0%
!!! TTTTTAGTGATGATAATGTT+GGG - chr8_3:22559651-22559670 None:intergenic 20.0%
!!! ATTTTTAGTGATGATAATGT+TGG - chr8_3:22559652-22559671 None:intergenic 20.0%
!! TTTAATCATGTAATTGACTA+TGG + chr8_3:22559934-22559953 Msa1282270:intron 20.0%
!!! TTGATAATTTATACATAGAG+CGG + chr8_3:22560314-22560333 Msa1282270:intron 20.0%
!!! TTGTATCGTTCAATTTTTAT+AGG + chr8_3:22560483-22560502 Msa1282270:intron 20.0%
!! TATTATTGTTGTATAGGATT+TGG - chr8_3:22560697-22560716 None:intergenic 20.0%
!! AATCCTATACAACAATAATA+TGG + chr8_3:22560697-22560716 Msa1282270:intron 20.0%
!!! TTAAAGGGACAATTATTTTA+AGG - chr8_3:22561026-22561045 None:intergenic 20.0%
!!! TGTTGTCTTGATATTTTAAA+GGG - chr8_3:22561041-22561060 None:intergenic 20.0%
!!! ATGTTGTCTTGATATTTTAA+AGG - chr8_3:22561042-22561061 None:intergenic 20.0%
!! ATTGTAAAGTTAGAAAATCA+AGG + chr8_3:22561295-22561314 Msa1282270:intron 20.0%
!! TTGTAAAGTTAGAAAATCAA+GGG + chr8_3:22561296-22561315 Msa1282270:intron 20.0%
!! TAGTTGACCAAAATAAATAA+AGG - chr8_3:22561961-22561980 None:intergenic 20.0%
!! TTCCAAATAATTTCAAATCT+AGG + chr8_3:22561995-22562014 Msa1282270:intron 20.0%
!!! ATCCTAGATTTGAAATTATT+TGG - chr8_3:22562000-22562019 None:intergenic 20.0%
!!! TATTGACTTATATAATAGAG+AGG + chr8_3:22563027-22563046 Msa1282270:intron 20.0%
!! ATTGTAAAAGTTAGTGTATA+TGG - chr8_3:22563066-22563085 None:intergenic 20.0%
!!! GAATCAAATTTTCTTAATTG+TGG + chr8_3:22563163-22563182 Msa1282270:intron 20.0%
!! TTTCTAAATCTTTATCTACA+AGG - chr8_3:22563337-22563356 None:intergenic 20.0%
!! TATGAAAATATCTTACGATA+TGG - chr8_3:22563623-22563642 None:intergenic 20.0%
!!! TATCAGTCACTTTTTTTTTT+TGG + chr8_3:22563802-22563821 Msa1282270:intron 20.0%
!! AAAGTAATCAACAAAATGAT+TGG + chr8_3:22563889-22563908 Msa1282270:intron 20.0%
!! TAATTGGAAAATTATGTGAT+TGG + chr8_3:22564193-22564212 Msa1282270:intron 20.0%
!!! TACTTTTGAAAAGAAAATTG+AGG + chr8_3:22564963-22564982 Msa1282270:intron 20.0%
!! AAAGAAAATTGAGGATTATT+AGG + chr8_3:22564972-22564991 Msa1282270:intron 20.0%
!! CCACATAAAAATTAATGAAT+TGG - chr8_3:22565308-22565327 None:intergenic 20.0%
!!! CCAATTCATTAATTTTTATG+TGG + chr8_3:22565305-22565324 Msa1282270:intron 20.0%
!! ATAATCGAATCAAATATATG+TGG - chr8_3:22565342-22565361 None:intergenic 20.0%
!!! TAAGAATATGCTTTTTAGTA+TGG - chr8_3:22565631-22565650 None:intergenic 20.0%
!!! ATACTAAAAAGCATATTCTT+AGG + chr8_3:22565630-22565649 Msa1282270:intron 20.0%
!!! ATTTTTATCTATACTCACAA+TGG + chr8_3:22566059-22566078 Msa1282270:CDS 20.0%
!! CATTATAATTGAAGTTATTG+AGG + chr8_3:22566332-22566351 Msa1282270:CDS 20.0%
!!! AAAGTGTTTTGAGTATAAAA+AGG + chr8_3:22566479-22566498 Msa1282270:CDS 20.0%
!! AATTATAGTAGCATTATCTA+TGG - chr8_3:22566597-22566616 None:intergenic 20.0%
! GTCTTATATAGGGAAAATTA+TGG - chr8_3:22559598-22559617 None:intergenic 25.0%
!!! TTTTAGTGATGATAATGTTG+GGG - chr8_3:22559650-22559669 None:intergenic 25.0%
! AGGAAAGAATAATAATTGAG+GGG - chr8_3:22559893-22559912 None:intergenic 25.0%
! GAGGAAAGAATAATAATTGA+GGG - chr8_3:22559894-22559913 None:intergenic 25.0%
! TCACATTATATAGACATTAG+CGG - chr8_3:22560367-22560386 None:intergenic 25.0%
! ATACAAACAAGATTAGCATA+AGG - chr8_3:22560469-22560488 None:intergenic 25.0%
!!! CAATTTATAGCTTTAGTTCA+TGG + chr8_3:22560547-22560566 Msa1282270:intron 25.0%
!!! GGAGTTTTATGATAATGAAT+GGG + chr8_3:22560639-22560658 Msa1282270:intron 25.0%
!!! GAGTTTTATGATAATGAATG+GGG + chr8_3:22560640-22560659 Msa1282270:intron 25.0%
! TTGTATAGGATTTGGATTTA+CGG - chr8_3:22560689-22560708 None:intergenic 25.0%
! CAACCATATTATTGTTGTAT+AGG - chr8_3:22560703-22560722 None:intergenic 25.0%
! AGAGAGAGAAAGAAAATAAA+GGG - chr8_3:22560752-22560771 None:intergenic 25.0%
! AAGAGAGAGAAAGAAAATAA+AGG - chr8_3:22560753-22560772 None:intergenic 25.0%
! TGAAGTAGTACTGTATTATT+TGG + chr8_3:22561248-22561267 Msa1282270:intron 25.0%
! GAAGTAGTACTGTATTATTT+GGG + chr8_3:22561249-22561268 Msa1282270:intron 25.0%
!!! ATTGGACAAGTATTTTGAAA+CGG - chr8_3:22561342-22561361 None:intergenic 25.0%
!!! TTTGGACATGTATTTTGAAA+CGG + chr8_3:22561552-22561571 Msa1282270:intron 25.0%
!! ATTAAAGGCACATAATAGTT+CGG - chr8_3:22561879-22561898 None:intergenic 25.0%
! GTGACAGTTATTAATAAAGT+TGG - chr8_3:22561911-22561930 None:intergenic 25.0%
!!! ATGCACTCCTTTATTTATTT+TGG + chr8_3:22561951-22561970 Msa1282270:intron 25.0%
!! TAAGTTGGGGAAAAATTATA+TGG - chr8_3:22562198-22562217 None:intergenic 25.0%
! CAAATCTTGAAATGGAATAT+TGG - chr8_3:22562382-22562401 None:intergenic 25.0%
! GACAAATAATATACAGGAAT+AGG - chr8_3:22562412-22562431 None:intergenic 25.0%
! AATGAGGACAAATAATATAC+AGG - chr8_3:22562418-22562437 None:intergenic 25.0%
!!! CAAAATTTTGCTTTAGCTTA+TGG + chr8_3:22562487-22562506 Msa1282270:intron 25.0%
!!! CTAAGAGTTCATTTTTCAAT+TGG + chr8_3:22562708-22562727 Msa1282270:CDS 25.0%
! TTTAGAGAAAAAACAAGACA+AGG + chr8_3:22562948-22562967 Msa1282270:intron 25.0%
! TTAGAGAAAAAACAAGACAA+GGG + chr8_3:22562949-22562968 Msa1282270:intron 25.0%
! AAAAGTTAGTGTATATGGTA+GGG - chr8_3:22563061-22563080 None:intergenic 25.0%
! TAAAAGTTAGTGTATATGGT+AGG - chr8_3:22563062-22563081 None:intergenic 25.0%
! TAAAGAATTTCTGATCAGTT+TGG - chr8_3:22563360-22563379 None:intergenic 25.0%
! TTGTTTATTACGGAGTTTAT+TGG - chr8_3:22563423-22563442 None:intergenic 25.0%
!! TAAAAAACTTAGAGCTTGTT+TGG - chr8_3:22563705-22563724 None:intergenic 25.0%
!! CAATAGAACTCAATTACTTT+TGG - chr8_3:22563741-22563760 None:intergenic 25.0%
! ATCAATATTTGATTCTGCAT+TGG - chr8_3:22563928-22563947 None:intergenic 25.0%
!! CACATAATTTTCCAATTAGA+TGG - chr8_3:22564191-22564210 None:intergenic 25.0%
! ATGTATGTGACAAAAAATTC+AGG + chr8_3:22564468-22564487 Msa1282270:intron 25.0%
! AAAAAATTCAGGACAATGTT+GGG + chr8_3:22564479-22564498 Msa1282270:intron 25.0%
! CTTATTTACCCATTGATAAA+AGG + chr8_3:22565141-22565160 Msa1282270:intron 25.0%
!! TTCATTAATTTTTATGTGGC+AGG + chr8_3:22565309-22565328 Msa1282270:intron 25.0%
!! TGTTTGATGATAAATGTTAG+AGG + chr8_3:22565423-22565442 Msa1282270:intron 25.0%
!! AATAATCTGCAACAGATTTT+TGG + chr8_3:22565672-22565691 Msa1282270:intron 25.0%
! TTAAACAAGTTAGCCATATA+GGG - chr8_3:22565807-22565826 None:intergenic 25.0%
! ATTAAACAAGTTAGCCATAT+AGG - chr8_3:22565808-22565827 None:intergenic 25.0%
!!! GAATTGAAATTTTGATCCTA+GGG - chr8_3:22565896-22565915 None:intergenic 25.0%
!!! AATTTTTTACGATCAAATGC+CGG + chr8_3:22566242-22566261 Msa1282270:CDS 25.0%
! TATATAAGTATAGTAGGAGT+TGG + chr8_3:22566294-22566313 Msa1282270:CDS 25.0%
!! ACACCTTGATGATTATTATT+GGG + chr8_3:22566407-22566426 Msa1282270:CDS 25.0%
! TAACCCAATAATAATCATCA+AGG - chr8_3:22566413-22566432 None:intergenic 25.0%
! TGATGATTATTATTGGGTTA+TGG + chr8_3:22566413-22566432 Msa1282270:CDS 25.0%
!! TTAATTTGGGTGTTTATATG+TGG + chr8_3:22566451-22566470 Msa1282270:CDS 25.0%
! TTTGAGTATAAAAAGGTAGA+TGG + chr8_3:22566486-22566505 Msa1282270:CDS 25.0%
!! TAAGAACATGATTGTTACTT+TGG + chr8_3:22566703-22566722 Msa1282270:three_prime_UTR 25.0%
!!! TAGAAATTGGGGTTTTGATT+TGG - chr8_3:22559525-22559544 None:intergenic 30.0%
! AGTACTATGTTTGGATTTTG+GGG - chr8_3:22559574-22559593 None:intergenic 30.0%
! GAGTACTATGTTTGGATTTT+GGG - chr8_3:22559575-22559594 None:intergenic 30.0%
!! AATTATGGGAGTACTATGTT+TGG - chr8_3:22559583-22559602 None:intergenic 30.0%
! TTTAGTGATGATAATGTTGG+GGG - chr8_3:22559649-22559668 None:intergenic 30.0%
!! TTTTGTTTAGGATGATGAGT+TGG - chr8_3:22559685-22559704 None:intergenic 30.0%
GAACTTACATATGATGAAGA+TGG - chr8_3:22559801-22559820 None:intergenic 30.0%
GGAAAGAATAATAATTGAGG+GGG - chr8_3:22559892-22559911 None:intergenic 30.0%
GGAGGAAAGAATAATAATTG+AGG - chr8_3:22559895-22559914 None:intergenic 30.0%
CATGATTAAAAAATGGGTGT+TGG - chr8_3:22559924-22559943 None:intergenic 30.0%
! GTTCATTCAGAAATTTTGTG+AGG - chr8_3:22560042-22560061 None:intergenic 30.0%
! TTCATAGCTGATTCATATCT+TGG + chr8_3:22560133-22560152 Msa1282270:CDS 30.0%
TTATACATAGAGCGGAAAAA+CGG + chr8_3:22560322-22560341 Msa1282270:intron 30.0%
ATATAGACATTAGCGGAAAA+CGG - chr8_3:22560360-22560379 None:intergenic 30.0%
ACAAGATTAGCATAAGGTAA+AGG - chr8_3:22560463-22560482 None:intergenic 30.0%
!! CGGAGTTTTATGATAATGAA+TGG + chr8_3:22560638-22560657 Msa1282270:intron 30.0%
! TTACAATTCACTCGTTTTAC+AGG - chr8_3:22561282-22561301 None:intergenic 30.0%
ATAGTGCACATTGCAAAAAT+TGG - chr8_3:22561360-22561379 None:intergenic 30.0%
TATATGTGAAGTGGTTGATT+TGG + chr8_3:22561534-22561553 Msa1282270:intron 30.0%
!! TTCTAAATTAAGAGTGCTTC+AGG - chr8_3:22561667-22561686 None:intergenic 30.0%
AAGTTCCTTAAAGAATGATC+CGG + chr8_3:22561763-22561782 Msa1282270:intron 30.0%
! TTGCTCACTTTAAAGAAACA+GGG + chr8_3:22561852-22561871 Msa1282270:intron 30.0%
! TATTAATAAAGTTGGCTCCA+AGG - chr8_3:22561903-22561922 None:intergenic 30.0%
GAGCTAAGTGATAAAAAAAG+AGG - chr8_3:22562055-22562074 None:intergenic 30.0%
GAAATGTGCAAATCTTGAAA+TGG - chr8_3:22562390-22562409 None:intergenic 30.0%
!! AGAGTTCATTTTTCAATTGG+TGG + chr8_3:22562711-22562730 Msa1282270:CDS 30.0%
!! ATTTTTCAATTGGTGGTACT+TGG + chr8_3:22562718-22562737 Msa1282270:CDS 30.0%
!! TTTTTCAATTGGTGGTACTT+GGG + chr8_3:22562719-22562738 Msa1282270:CDS 30.0%
GTTTATACCAGTATATCTTC+AGG + chr8_3:22562769-22562788 Msa1282270:CDS 30.0%
TAGTTTACCTGAAGATATAC+TGG - chr8_3:22562779-22562798 None:intergenic 30.0%
!!! TACTTTTTCATCTAGCATAG+AGG + chr8_3:22562996-22563015 Msa1282270:intron 30.0%
! GTGACATATCTCAACTATTT+TGG + chr8_3:22563235-22563254 Msa1282270:intron 30.0%
!!! GTCACTTTTTTTTTTTGGAG+AGG + chr8_3:22563807-22563826 Msa1282270:intron 30.0%
CATAGTTATACAAGTTAACG+TGG - chr8_3:22563851-22563870 None:intergenic 30.0%
!! TTATAAAAGACTGGTTTGCA+AGG + chr8_3:22563954-22563973 Msa1282270:intron 30.0%
GATTGGAATTAGTTCACTAA+AGG + chr8_3:22564210-22564229 Msa1282270:intron 30.0%
CAAAAAATTCAGGACAATGT+TGG + chr8_3:22564478-22564497 Msa1282270:intron 30.0%
GGCAAAAATTGTTACTATGA+AGG - chr8_3:22564672-22564691 None:intergenic 30.0%
! TCTCTTTTTACACAAGATGA+TGG + chr8_3:22564884-22564903 Msa1282270:intron 30.0%
ATGGTTGAGCAAAATTTATG+TGG + chr8_3:22565012-22565031 Msa1282270:intron 30.0%
TTATGTGGTTGAGGATTATT+AGG + chr8_3:22565027-22565046 Msa1282270:intron 30.0%
GGAGTGAAAGATAAGTTATA+TGG + chr8_3:22565048-22565067 Msa1282270:intron 30.0%
ATGGTTGAGCAAAATTTATG+TGG + chr8_3:22565012-22565031 Msa1282270:intron 30.0%
TGGTTGAGCAAAATTTATGT+GGG + chr8_3:22565013-22565032 Msa1282270:intron 30.0%
TTTACCCATTGATAAAAGGT+CGG + chr8_3:22565145-22565164 Msa1282270:intron 30.0%
GACAAGTGACAAACTTTAAT+AGG + chr8_3:22565478-22565497 Msa1282270:intron 30.0%
!! TTAATTTGTTATGGGCATGT+AGG + chr8_3:22565501-22565520 Msa1282270:intron 30.0%
TTGATACCAACAACTTATTG+TGG + chr8_3:22565542-22565561 Msa1282270:intron 30.0%
TGATACCAACAACTTATTGT+GGG + chr8_3:22565543-22565562 Msa1282270:intron 30.0%
CTATCAAACAACAAACACAA+AGG - chr8_3:22565585-22565604 None:intergenic 30.0%
!! TATGCTTTTTAGTATGGTTG+TGG - chr8_3:22565625-22565644 None:intergenic 30.0%
!!! TGGATTTCTTGTTTTGTTTG+AGG - chr8_3:22565728-22565747 None:intergenic 30.0%
CAAACAAAACAAGAAATCCA+TGG + chr8_3:22565728-22565747 Msa1282270:CDS 30.0%
CACACATATTTCACTAAACA+AGG + chr8_3:22565853-22565872 Msa1282270:CDS 30.0%
ACATATTTCACTAAACAAGG+TGG + chr8_3:22565856-22565875 Msa1282270:CDS 30.0%
!! GGAATTGAAATTTTGATCCT+AGG - chr8_3:22565897-22565916 None:intergenic 30.0%
TATACTCACAATGGTTGTTT+CGG + chr8_3:22566068-22566087 Msa1282270:CDS 30.0%
GTTAATGTTGCTAAAAGTCA+CGG + chr8_3:22566111-22566130 Msa1282270:CDS 30.0%
CAATCCTACCAATGTATATT+TGG + chr8_3:22566154-22566173 Msa1282270:CDS 30.0%
! CACACCTTGATGATTATTAT+TGG + chr8_3:22566406-22566425 Msa1282270:CDS 30.0%
! TGTGTTAAGTGCTGTTAATT+TGG + chr8_3:22566437-22566456 Msa1282270:CDS 30.0%
! GTGTTAAGTGCTGTTAATTT+GGG + chr8_3:22566438-22566457 Msa1282270:CDS 30.0%
TCTCTTAGTCATGGTCATAT+TGG - chr8_3:22559487-22559506 None:intergenic 35.0%
CTCTTTCTATCTCTTAGTCA+TGG - chr8_3:22559496-22559515 None:intergenic 35.0%
GACTAAGAGATAGAAAGAGA+AGG + chr8_3:22559497-22559516 Msa1282270:five_prime_UTR 35.0%
!! AAGGAGCACTACTAGAAATT+GGG - chr8_3:22559537-22559556 None:intergenic 35.0%
!! AAAGGAGCACTACTAGAAAT+TGG - chr8_3:22559538-22559557 None:intergenic 35.0%
!! GGAGTACTATGTTTGGATTT+TGG - chr8_3:22559576-22559595 None:intergenic 35.0%
! GGATGTTTGGGTCTTATATA+GGG - chr8_3:22559608-22559627 None:intergenic 35.0%
! AGGATGTTTGGGTCTTATAT+AGG - chr8_3:22559609-22559628 None:intergenic 35.0%
!! TGATTTTGGAGAGGATGTTT+GGG - chr8_3:22559620-22559639 None:intergenic 35.0%
!! ATGATTTTGGAGAGGATGTT+TGG - chr8_3:22559621-22559640 None:intergenic 35.0%
!!! TTTGGTGGTGAGTTTTGTTT+AGG - chr8_3:22559697-22559716 None:intergenic 35.0%
!!! AGTTACTTTTGCTCTTGCTT+GGG - chr8_3:22559733-22559752 None:intergenic 35.0%
!! AAAAATGGGTGTTGGAGATT+TGG - chr8_3:22559916-22559935 None:intergenic 35.0%
AGTGAAAAACGTGAACACAT+GGG + chr8_3:22560075-22560094 Msa1282270:CDS 35.0%
AATGAGTGAAGACAAGAGTA+TGG - chr8_3:22560170-22560189 None:intergenic 35.0%
GTCTTCACTCATTTATCTTG+TGG + chr8_3:22560177-22560196 Msa1282270:CDS 35.0%
TAGTTCATGGTTCTTGATTC+TGG + chr8_3:22560560-22560579 Msa1282270:intron 35.0%
! ATGCAACACTTTGTCTTTTG+CGG + chr8_3:22560618-22560637 Msa1282270:intron 35.0%
TGTGTGATATGTTAGTGATG+TGG - chr8_3:22560782-22560801 None:intergenic 35.0%
!!! GACAAGTATTTTGAAACGGA+GGG - chr8_3:22561338-22561357 None:intergenic 35.0%
! GTGCATTGATATATGTGAAG+TGG + chr8_3:22561525-22561544 Msa1282270:intron 35.0%
!!! GACATGTATTTTGAAACGGA+GGG + chr8_3:22561556-22561575 Msa1282270:intron 35.0%
! GTTGCTCACTTTAAAGAAAC+AGG + chr8_3:22561851-22561870 Msa1282270:intron 35.0%
ATTATGTGCCTTTAATGCCT+TGG + chr8_3:22561883-22561902 Msa1282270:intron 35.0%
!! ATGGGCTTAGTTTGATAATG+AGG - chr8_3:22562434-22562453 None:intergenic 35.0%
TAAATTGCAAGTGCATGCAT+GGG - chr8_3:22562452-22562471 None:intergenic 35.0%
TTAAATTGCAAGTGCATGCA+TGG - chr8_3:22562453-22562472 None:intergenic 35.0%
! TTGCTTTAGCTTATGGTTGA+TGG + chr8_3:22562494-22562513 Msa1282270:intron 35.0%
TTTCTTGACACTTTCAGTGT+CGG + chr8_3:22562556-22562575 Msa1282270:CDS 35.0%
AAGTTTGAACACAAGGCTTA+TGG - chr8_3:22562643-22562662 None:intergenic 35.0%
TTAGTGTATATGGTAGGGTT+TGG - chr8_3:22563056-22563075 None:intergenic 35.0%
! TGGCTTTTACTTTGTACCTT+TGG + chr8_3:22563255-22563274 Msa1282270:intron 35.0%
! GACTAGTTATAGTCTTGGTT+TGG - chr8_3:22563315-22563334 None:intergenic 35.0%
!! ACAAGGACTAGTTATAGTCT+TGG - chr8_3:22563320-22563339 None:intergenic 35.0%
AAACACTTGTGAGATTGCTT+AGG - chr8_3:22563652-22563671 None:intergenic 35.0%
AGAAACCAGTTTCACCAAAA+TGG + chr8_3:22564126-22564145 Msa1282270:intron 35.0%
GAAACCAGTTTCACCAAAAT+GGG + chr8_3:22564127-22564146 Msa1282270:intron 35.0%
! TGAGGAATATGTTCCCATTT+TGG - chr8_3:22564143-22564162 None:intergenic 35.0%
ATTGAAAAGACAGTTCTGTG+AGG - chr8_3:22564161-22564180 None:intergenic 35.0%
CAATTTGCACACCATCTAAT+TGG + chr8_3:22564177-22564196 Msa1282270:intron 35.0%
TTCACTAAAGGTAAGAGAAG+TGG + chr8_3:22564222-22564241 Msa1282270:intron 35.0%
TCTTCCTATTGGGAATCAAA+AGG + chr8_3:22564554-22564573 Msa1282270:CDS 35.0%
!! TGTACCTTTTGATTCCCAAT+AGG - chr8_3:22564561-22564580 None:intergenic 35.0%
! CAATTTTTGCCATAGTGAAG+AGG + chr8_3:22564681-22564700 Msa1282270:CDS 35.0%
TGGAGCAGTGTATGATATTT+AGG - chr8_3:22564739-22564758 None:intergenic 35.0%
TGCTCCATACAAATCAGTAT+AGG + chr8_3:22564752-22564771 Msa1282270:CDS 35.0%
TCCATACAAATCAGTATAGG+TGG + chr8_3:22564755-22564774 Msa1282270:intron 35.0%
CCATACAAATCAGTATAGGT+GGG + chr8_3:22564756-22564775 Msa1282270:intron 35.0%
!!! ATGAGTGGGTTAATTTTGCT+AGG + chr8_3:22564907-22564926 Msa1282270:intron 35.0%
!!! TGAGTGGGTTAATTTTGCTA+GGG + chr8_3:22564908-22564927 Msa1282270:intron 35.0%
GGAGTGAAAGACAAGTTATA+TGG + chr8_3:22564993-22565012 Msa1282270:intron 35.0%
GAGCAAAATTTATGTGGTTG+AGG + chr8_3:22565018-22565037 Msa1282270:intron 35.0%
! GTTACCGACCTTTTATCAAT+GGG - chr8_3:22565152-22565171 None:intergenic 35.0%
! TGTTACCGACCTTTTATCAA+TGG - chr8_3:22565153-22565172 None:intergenic 35.0%
TAACACTACTCATGCTTAGT+TGG + chr8_3:22565168-22565187 Msa1282270:intron 35.0%
CTTTGTTACCCAGCAATAAA+AGG - chr8_3:22565279-22565298 None:intergenic 35.0%
GAATCAAATATATGTGGCGT+AGG - chr8_3:22565336-22565355 None:intergenic 35.0%
TTCGATTATAGAATGAGCGT+TGG + chr8_3:22565353-22565372 Msa1282270:intron 35.0%
CTAAACCCACAATAAGTTGT+TGG - chr8_3:22565551-22565570 None:intergenic 35.0%
TTCTTCGTCTAATCCCTATA+TGG + chr8_3:22565791-22565810 Msa1282270:CDS 35.0%
!! GAAATTTTGATCCTAGGGTA+TGG - chr8_3:22565891-22565910 None:intergenic 35.0%
CGTATATTGGAACAACGAAA+AGG - chr8_3:22565957-22565976 None:intergenic 35.0%
ATAACCGTGTTGCAAAGAAT+CGG + chr8_3:22566027-22566046 Msa1282270:CDS 35.0%
TCCTACCAATGTATATTTGG+TGG + chr8_3:22566157-22566176 Msa1282270:CDS 35.0%
ACCACCAAATATACATTGGT+AGG - chr8_3:22566161-22566180 None:intergenic 35.0%
AGCAACCACCAAATATACAT+TGG - chr8_3:22566165-22566184 None:intergenic 35.0%
CTTCCTCAATATATGATCAC+CGG + chr8_3:22566183-22566202 Msa1282270:CDS 35.0%
ATTCCGGTGATCATATATTG+AGG - chr8_3:22566189-22566208 None:intergenic 35.0%
TACTATACTTATATACGCCG+CGG - chr8_3:22566289-22566308 None:intergenic 35.0%
AGATGAAAGAAGTAACCAAG+AGG + chr8_3:22566509-22566528 Msa1282270:CDS 35.0%
GATGAAAGAAGTAACCAAGA+GGG + chr8_3:22566510-22566529 Msa1282270:CDS 35.0%
!! TTCTGGAGTGTAGTAAAACA+AGG + chr8_3:22566554-22566573 Msa1282270:exon 35.0%
AGTAGCATTATCTATGGCAA+AGG - chr8_3:22566591-22566610 None:intergenic 35.0%
!! AGGAGCACTACTAGAAATTG+GGG - chr8_3:22559536-22559555 None:intergenic 40.0%
!!! ATGTTTGGATTTTGGGGTGT+GGG - chr8_3:22559568-22559587 None:intergenic 40.0%
!!! TATGTTTGGATTTTGGGGTG+TGG - chr8_3:22559569-22559588 None:intergenic 40.0%
!! GGGAAATCATGATTTTGGAG+AGG - chr8_3:22559629-22559648 None:intergenic 40.0%
! GTTGGGGGAAATCATGATTT+TGG - chr8_3:22559634-22559653 None:intergenic 40.0%
CAAAACTCACCACCAAATCA+TGG + chr8_3:22559700-22559719 Msa1282270:exon 40.0%
!!! GAGTTACTTTTGCTCTTGCT+TGG - chr8_3:22559734-22559753 None:intergenic 40.0%
CATCACTCCACAACCAAAAA+GGG + chr8_3:22559761-22559780 Msa1282270:CDS 40.0%
GAGATTTGCATACCAAGGTT+TGG + chr8_3:22559997-22560016 Msa1282270:CDS 40.0%
TGAGATTTGATGCCAAACCT+TGG - chr8_3:22560012-22560031 None:intergenic 40.0%
! TTTTTCACTGCTGTGGTTGT+TGG - chr8_3:22560064-22560083 None:intergenic 40.0%
CAGTGAAAAACGTGAACACA+TGG + chr8_3:22560074-22560093 Msa1282270:CDS 40.0%
AAAAACGTGAACACATGGGT+TGG + chr8_3:22560079-22560098 Msa1282270:CDS 40.0%
!! CAAAGTGTTGCATCACAAAG+AGG - chr8_3:22560611-22560630 None:intergenic 40.0%
!!! GGACAAGTATTTTGAAACGG+AGG - chr8_3:22561339-22561358 None:intergenic 40.0%
!!! GGACATGTATTTTGAAACGG+AGG + chr8_3:22561555-22561574 Msa1282270:intron 40.0%
TTCCTTAAAGAATGATCCGG+AGG + chr8_3:22561766-22561785 Msa1282270:intron 40.0%
TACCTCCGGATCATTCTTTA+AGG - chr8_3:22561771-22561790 None:intergenic 40.0%
AATGCTAACGAATGTACCTC+CGG - chr8_3:22561785-22561804 None:intergenic 40.0%
TAACGTTTCTCACGTCACAT+AGG + chr8_3:22562526-22562545 Msa1282270:intron 40.0%
AACGTTTCTCACGTCACATA+GGG + chr8_3:22562527-22562546 Msa1282270:intron 40.0%
GCACTTTATGTGCTTTCCAT+TGG + chr8_3:22562608-22562627 Msa1282270:CDS 40.0%
TATGTGCTTTCCATTGGTGA+AGG + chr8_3:22562614-22562633 Msa1282270:CDS 40.0%
CTTGTGTACAACTTGACCAA+AGG - chr8_3:22563274-22563293 None:intergenic 40.0%
!! AAAAGACTGGTTTGCAAGGT+TGG + chr8_3:22563958-22563977 Msa1282270:intron 40.0%
!! TGTTCCCATTTTGGTGAAAC+TGG - chr8_3:22564134-22564153 None:intergenic 40.0%
AAATTCAGGACAATGTTGGG+TGG + chr8_3:22564482-22564501 Msa1282270:intron 40.0%
AATTCAGGACAATGTTGGGT+GGG + chr8_3:22564483-22564502 Msa1282270:intron 40.0%
! GGGAATCAAAAGGTACAGAA+AGG + chr8_3:22564564-22564583 Msa1282270:CDS 40.0%
! TTGTAAATGGACTCCCTGTA+GGG - chr8_3:22564594-22564613 None:intergenic 40.0%
CATCTTTCTCCTCTTCACTA+TGG - chr8_3:22564693-22564712 None:intergenic 40.0%
!! CCCACCTATACTGATTTGTA+TGG - chr8_3:22564759-22564778 None:intergenic 40.0%
!! TACACAAGATGATGGATGAG+TGG + chr8_3:22564892-22564911 Msa1282270:intron 40.0%
!! ACACAAGATGATGGATGAGT+GGG + chr8_3:22564893-22564912 Msa1282270:intron 40.0%
! TGTTACCCACCTTTTATTGC+TGG + chr8_3:22565267-22565286 Msa1282270:intron 40.0%
! GTTACCCACCTTTTATTGCT+GGG + chr8_3:22565268-22565287 Msa1282270:intron 40.0%
GTTACCCAGCAATAAAAGGT+GGG - chr8_3:22565275-22565294 None:intergenic 40.0%
TGTTACCCAGCAATAAAAGG+TGG - chr8_3:22565276-22565295 None:intergenic 40.0%
TTGTCACTCATCCAACAACA+TGG - chr8_3:22565463-22565482 None:intergenic 40.0%
! TTTGTTATGGGCATGTAGGT+TGG + chr8_3:22565505-22565524 Msa1282270:intron 40.0%
TTGTTATGGGCATGTAGGTT+GGG + chr8_3:22565506-22565525 Msa1282270:intron 40.0%
GTCACTGAACATAATCTCCA+TGG - chr8_3:22565748-22565767 None:intergenic 40.0%
! CCACTTGCTAGAAAATTCAC+CGG + chr8_3:22565991-22566010 Msa1282270:CDS 40.0%
AACTCCGATTCTTTGCAACA+CGG - chr8_3:22566034-22566053 None:intergenic 40.0%
GGCTCTTGTAGAAACGAAAA+GGG + chr8_3:22566089-22566108 Msa1282270:CDS 40.0%
AGTAAACGCATCAGAGATTC+CGG - chr8_3:22566205-22566224 None:intergenic 40.0%
TCTGATGCGTTTACTATCGT+TGG + chr8_3:22566210-22566229 Msa1282270:CDS 40.0%
! TTTTACGATCAAATGCCGGA+TGG + chr8_3:22566246-22566265 Msa1282270:CDS 40.0%
GCGGCGTATATAAGTATAGT+AGG + chr8_3:22566288-22566307 Msa1282270:CDS 40.0%
GCTGGGAGATAACATCAATA+GGG + chr8_3:22566383-22566402 Msa1282270:CDS 40.0%
GGCTACAATAGATATCGTTC+TGG + chr8_3:22566537-22566556 Msa1282270:CDS 40.0%
!!! TGTTTGGATTTTGGGGTGTG+GGG - chr8_3:22559567-22559586 None:intergenic 45.0%
TTGGGCTATCTGCCATGATT+TGG - chr8_3:22559715-22559734 None:intergenic 45.0%
!!! CCTTTTTGGTTGTGGAGTGA+TGG - chr8_3:22559763-22559782 None:intergenic 45.0%
CCATCACTCCACAACCAAAA+AGG + chr8_3:22559760-22559779 Msa1282270:CDS 45.0%
! AGCATTCCAACCACCCTTTT+TGG - chr8_3:22559777-22559796 None:intergenic 45.0%
!! AATGGGTGTTGGAGATTTGG+AGG - chr8_3:22559913-22559932 None:intergenic 45.0%
GCTGAGAGATTTGCATACCA+AGG + chr8_3:22559992-22560011 Msa1282270:CDS 45.0%
! GTTCACGTTTTTCACTGCTG+TGG - chr8_3:22560071-22560090 None:intergenic 45.0%
TCCTCACTATTCCCTTTGCT+TGG + chr8_3:22560106-22560125 Msa1282270:CDS 45.0%
ACCAAGCAAAGGGAATAGTG+AGG - chr8_3:22560110-22560129 None:intergenic 45.0%
TCACTATTCCCTTTGCTTGG+TGG + chr8_3:22560109-22560128 Msa1282270:CDS 45.0%
CTATGAAGCCACCAAGCAAA+GGG - chr8_3:22560120-22560139 None:intergenic 45.0%
TTTCTACTTCCCACACGTAG+GGG - chr8_3:22560666-22560685 None:intergenic 45.0%
GTTTCTACTTCCCACACGTA+GGG - chr8_3:22560667-22560686 None:intergenic 45.0%
! AGTTGGCTCCAAGGCATTAA+AGG - chr8_3:22561894-22561913 None:intergenic 45.0%
CTCTTAGCATCCTTCTCTTC+CGG - chr8_3:22562695-22562714 None:intergenic 45.0%
CACTTGTGAGATTGCTTAGG+AGG - chr8_3:22563649-22563668 None:intergenic 45.0%
ATTCAGGACAATGTTGGGTG+GGG + chr8_3:22564484-22564503 Msa1282270:intron 45.0%
! GCATTGGCACTCTTCCTATT+GGG + chr8_3:22564544-22564563 Msa1282270:CDS 45.0%
TACAGAAAGGAAAGCCCTAC+AGG + chr8_3:22564577-22564596 Msa1282270:CDS 45.0%
ACAGAAAGGAAAGCCCTACA+GGG + chr8_3:22564578-22564597 Msa1282270:CDS 45.0%
! CTTGTAAATGGACTCCCTGT+AGG - chr8_3:22564595-22564614 None:intergenic 45.0%
AGGGAGTCCATTTACAAGAC+TGG + chr8_3:22564597-22564616 Msa1282270:CDS 45.0%
! ACTTGGGCCAGTCTTGTAAA+TGG - chr8_3:22564607-22564626 None:intergenic 45.0%
AACTGCGGCGACAAAAACTT+GGG - chr8_3:22564623-22564642 None:intergenic 45.0%
GGTCGAACATGAACATGATG+AGG - chr8_3:22564718-22564737 None:intergenic 45.0%
! CAACAACATGGCTTGGATGT+TGG - chr8_3:22565451-22565470 None:intergenic 45.0%
CAACATCCAAGCCATGTTGT+TGG + chr8_3:22565449-22565468 Msa1282270:intron 45.0%
ACTCATCCAACAACATGGCT+TGG - chr8_3:22565458-22565477 None:intergenic 45.0%
GGCACATTAATCCATACCCT+AGG + chr8_3:22565877-22565896 Msa1282270:CDS 45.0%
! ACGAAGACTCGGTCGTATAT+TGG - chr8_3:22565970-22565989 None:intergenic 45.0%
!! CCGGTGAATTTTCTAGCAAG+TGG - chr8_3:22565994-22566013 None:intergenic 45.0%
AAATTCACCGGTCACCCAAA+TGG + chr8_3:22566003-22566022 Msa1282270:CDS 45.0%
AATTCACCGGTCACCCAAAT+GGG + chr8_3:22566004-22566023 Msa1282270:CDS 45.0%
GCAACACGGTTATCCCATTT+GGG - chr8_3:22566020-22566039 None:intergenic 45.0%
TGCAACACGGTTATCCCATT+TGG - chr8_3:22566021-22566040 None:intergenic 45.0%
GTGTTGCAAAGAATCGGAGT+TGG + chr8_3:22566033-22566052 Msa1282270:CDS 45.0%
CGGCTCTTGTAGAAACGAAA+AGG + chr8_3:22566088-22566107 Msa1282270:CDS 45.0%
CCCAAACTTCTCAATCCATC+CGG - chr8_3:22566264-22566283 None:intergenic 45.0%
!! CCGGATGGATTGAGAAGTTT+GGG + chr8_3:22566261-22566280 Msa1282270:CDS 45.0%
GAGGCAATTAGTGCAAAAGC+TGG + chr8_3:22566351-22566370 Msa1282270:CDS 45.0%
GTGCAAAAGCTGGTGAGAAA+TGG + chr8_3:22566361-22566380 Msa1282270:CDS 45.0%
AAAAGCTGGTGAGAAATGGC+TGG + chr8_3:22566365-22566384 Msa1282270:CDS 45.0%
AAAGCTGGTGAGAAATGGCT+GGG + chr8_3:22566366-22566385 Msa1282270:CDS 45.0%
GGCTGGGAGATAACATCAAT+AGG + chr8_3:22566382-22566401 Msa1282270:CDS 45.0%
AGAAGTAACCAAGAGGGTTC+TGG + chr8_3:22566516-22566535 Msa1282270:CDS 45.0%
TATTGTAGCCAGAACCCTCT+TGG - chr8_3:22566527-22566546 None:intergenic 45.0%
!! TATAAATTGAAATTTAATAT+TGG - chr8_3:22560536-22560555 None:intergenic 5.0%
!!! ATTTAAAATAAAATAAAATG+AGG - chr8_3:22563767-22563786 None:intergenic 5.0%
! GGCTATCTGCCATGATTTGG+TGG - chr8_3:22559712-22559731 None:intergenic 50.0%
!! GGTTGTGGAGTGATGGATGA+GGG - chr8_3:22559756-22559775 None:intergenic 50.0%
!! TGGTTGTGGAGTGATGGATG+AGG - chr8_3:22559757-22559776 None:intergenic 50.0%
CACTCCACAACCAAAAAGGG+TGG + chr8_3:22559764-22559783 Msa1282270:CDS 50.0%
!!! CCAACCACCCTTTTTGGTTG+TGG - chr8_3:22559771-22559790 None:intergenic 50.0%
CCACAACCAAAAAGGGTGGT+TGG + chr8_3:22559768-22559787 Msa1282270:CDS 50.0%
GCTATGAAGCCACCAAGCAA+AGG - chr8_3:22560121-22560140 None:intergenic 50.0%
TGGTTCTTGATTCTGGCAGC+TGG + chr8_3:22560567-22560586 Msa1282270:intron 50.0%
GGTTTCTACTTCCCACACGT+AGG - chr8_3:22560668-22560687 None:intergenic 50.0%
GTGCTTTCCATTGGTGAAGG+AGG + chr8_3:22562617-22562636 Msa1282270:CDS 50.0%
CTTATGGCCTCCTTCACCAA+TGG - chr8_3:22562627-22562646 None:intergenic 50.0%
GCGGCGAAAGTTTGAACACA+AGG - chr8_3:22562650-22562669 None:intergenic 50.0%
! TTGGTGGTACTTGGGCATTG+TGG + chr8_3:22562727-22562746 Msa1282270:CDS 50.0%
!! GACTGGTTTGCAAGGTTGGT+AGG + chr8_3:22563962-22563981 Msa1282270:intron 50.0%
!! AGGAGTATTGGCAGGAGTGT+TGG + chr8_3:22564516-22564535 Msa1282270:CDS 50.0%
!! ATTGGCAGGAGTGTTGGCAT+TGG + chr8_3:22564522-22564541 Msa1282270:CDS 50.0%
!! AGGAGTGTTGGCATTGGCAT+TGG + chr8_3:22564528-22564547 Msa1282270:CDS 50.0%
!! GGCATTGGCACTCTTCCTAT+TGG + chr8_3:22564543-22564562 Msa1282270:CDS 50.0%
GAACTGCGGCGACAAAAACT+TGG - chr8_3:22564624-22564643 None:intergenic 50.0%
! TGGGCATGTAGGTTGGGTTT+CGG + chr8_3:22565512-22565531 Msa1282270:intron 50.0%
! CATGTAGGTTGGGTTTCGGT+TGG + chr8_3:22565516-22565535 Msa1282270:intron 50.0%
TTCCCTCCAGCATCACTTCA+AGG + chr8_3:22565913-22565932 Msa1282270:CDS 50.0%
TAGCAAGTGGCACGAAGACT+CGG - chr8_3:22565981-22566000 None:intergenic 50.0%
GGTTATCCCATTTGGGTGAC+CGG - chr8_3:22566013-22566032 None:intergenic 50.0%
!! GCCGGATGGATTGAGAAGTT+TGG + chr8_3:22566260-22566279 Msa1282270:CDS 50.0%
ATTGAGAAGTTTGGGAGCCG+CGG + chr8_3:22566269-22566288 Msa1282270:CDS 50.0%
TGGGGTGTGGGGATGAGAAA+AGG - chr8_3:22559556-22559575 None:intergenic 55.0%
CGTGTCGTCGTCGAACTGAT+CGG - chr8_3:22562672-22562691 None:intergenic 55.0%
! TGGTACTTGGGCATTGTGGC+TGG + chr8_3:22562731-22562750 Msa1282270:CDS 55.0%
GACAATGTTGGGTGGGGTGT+GGG + chr8_3:22564490-22564509 Msa1282270:CDS 55.0%
ACAATGTTGGGTGGGGTGTG+GGG + chr8_3:22564491-22564510 Msa1282270:CDS 55.0%
! GGGTGTGGGGTTAGGAGTAT+TGG + chr8_3:22564504-22564523 Msa1282270:CDS 55.0%
!! GTGGGGTTAGGAGTATTGGC+AGG + chr8_3:22564508-22564527 Msa1282270:CDS 55.0%
TTGTCGCCGCAGTTCGTAAG+TGG + chr8_3:22564629-22564648 Msa1282270:CDS 55.0%
GGCCTTGAAGTGATGCTGGA+GGG - chr8_3:22565918-22565937 None:intergenic 55.0%
AGGCCTTGAAGTGATGCTGG+AGG - chr8_3:22565919-22565938 None:intergenic 55.0%
ACGAGGCCTTGAAGTGATGC+TGG - chr8_3:22565922-22565941 None:intergenic 55.0%
GCATCACTTCAAGGCCTCGT+CGG + chr8_3:22565922-22565941 Msa1282270:CDS 55.0%
AAAGGATCGTGACTCCGACG+AGG - chr8_3:22565939-22565958 None:intergenic 55.0%
ATGAATGGGGCCCCTACGTG+TGG + chr8_3:22560653-22560672 Msa1282270:intron 60.0%
TGAATGGGGCCCCTACGTGT+GGG + chr8_3:22560654-22560673 Msa1282270:intron 60.0%
GTCGTCGTCGAACTGATCGG+CGG - chr8_3:22562669-22562688 None:intergenic 60.0%
TCAGTTCGACGACGACACGC+CGG + chr8_3:22562673-22562692 Msa1282270:CDS 60.0%
GGACAATGTTGGGTGGGGTG+TGG + chr8_3:22564489-22564508 Msa1282270:intron 60.0%
CACGCGCCACTTACGAACTG+CGG - chr8_3:22564638-22564657 None:intergenic 60.0%
CGACGACACGCCGGAAGAGA+AGG + chr8_3:22562682-22562701 Msa1282270:CDS 65.0%
GTTGGGTGGGGTGTGGGGTT+AGG + chr8_3:22564496-22564515 Msa1282270:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 22559460 22566745 22559460 ID=Msa1282270;Name=Msa1282270
chr8_3 mRNA 22559460 22566745 22559460 ID=Msa1282270-mRNA-1;Parent=Msa1282270;Name=Msa1282270-mRNA-1;_AED=0.07;_eAED=0.07;_QI=259|1|1|1|1|1|5|179|572
chr8_3 exon 22559460 22559812 22559460 ID=Msa1282270-mRNA-1:exon:8032;Parent=Msa1282270-mRNA-1
chr8_3 exon 22559981 22560198 22559981 ID=Msa1282270-mRNA-1:exon:8033;Parent=Msa1282270-mRNA-1
chr8_3 exon 22562548 22562790 22562548 ID=Msa1282270-mRNA-1:exon:8034;Parent=Msa1282270-mRNA-1
chr8_3 exon 22564490 22564773 22564490 ID=Msa1282270-mRNA-1:exon:8035;Parent=Msa1282270-mRNA-1
chr8_3 exon 22565687 22566745 22565687 ID=Msa1282270-mRNA-1:exon:8036;Parent=Msa1282270-mRNA-1
chr8_3 five_prime_UTR 22559460 22559718 22559460 ID=Msa1282270-mRNA-1:five_prime_utr;Parent=Msa1282270-mRNA-1
chr8_3 CDS 22559719 22559812 22559719 ID=Msa1282270-mRNA-1:cds;Parent=Msa1282270-mRNA-1
chr8_3 CDS 22559981 22560198 22559981 ID=Msa1282270-mRNA-1:cds;Parent=Msa1282270-mRNA-1
chr8_3 CDS 22562548 22562790 22562548 ID=Msa1282270-mRNA-1:cds;Parent=Msa1282270-mRNA-1
chr8_3 CDS 22564490 22564773 22564490 ID=Msa1282270-mRNA-1:cds;Parent=Msa1282270-mRNA-1
chr8_3 CDS 22565687 22566566 22565687 ID=Msa1282270-mRNA-1:cds;Parent=Msa1282270-mRNA-1
chr8_3 three_prime_UTR 22566567 22566745 22566567 ID=Msa1282270-mRNA-1:three_prime_utr;Parent=Msa1282270-mRNA-1
Gene Sequence

>Msa1282270

ATGGCAGATAGCCCAAGCAAGAGCAAAAGTAACTCCCTCATCCATCACTCCACAACCAAAAAGGGTGGTTGGAATGCTGCCATCTTCATCATATTTGTGGAATTTGCTGAGAGATTTGCATACCAAGGTTTGGCATCAAATCTCATAAACTACCTCACAAAATTTCTGAATGAACCAACAACCACAGCAGTGAAAAACGTGAACACATGGGTTGGTGTCTCCTCACTATTCCCTTTGCTTGGTGGCTTCATAGCTGATTCATATCTTGGTCGATTCAACACCATACTCTTGTCTTCACTCATTTATCTTGTGGGCATGATTTTCTTGACACTTTCAGTGTCGGCACTTAGACACAAGACACTTTTCTTCTTTGCACTTTATGTGCTTTCCATTGGTGAAGGAGGCCATAAGCCTTGTGTTCAAACTTTCGCCGCCGATCAGTTCGACGACGACACGCCGGAAGAGAAGGATGCTAAGAGTTCATTTTTCAATTGGTGGTACTTGGGCATTGTGGCTGGTTCAACTGCTGCTGTGTTTATACCAGTATATCTTCAGGACAATGTTGGGTGGGGTGTGGGGTTAGGAGTATTGGCAGGAGTGTTGGCATTGGCATTGGCACTCTTCCTATTGGGAATCAAAAGGTACAGAAAGGAAAGCCCTACAGGGAGTCCATTTACAAGACTGGCCCAAGTTTTTGTCGCCGCAGTTCGTAAGTGGCGCGTGCAAGACACTCTCCTTCATAGTAACAATTTTTGCCATAGTGAAGAGGAGAAAGATGAGCCTCATCATGTTCATGTTCGACCTAAATATCATACACTGCTCCATACAAATCAGTATAGATTTTTGGACAAAGCAGCAATAATTGATGAAGTTGATTCCTCAAACAAAACAAGAAATCCATGGAGATTATGTTCAGTGACTCAAGTTGAAGAAGTGAAACTAGTTCTTCGTCTAATCCCTATATGGCTAACTTGTTTAATGTTCACTGTTGTTCAAGCTCAAGTACACACATATTTCACTAAACAAGGTGGCACATTAATCCATACCCTAGGATCAAAATTTCAATTCCCTCCAGCATCACTTCAAGGCCTCGTCGGAGTCACGATCCTTTTCGTTGTTCCAATATACGACCGAGTCTTCGTGCCACTTGCTAGAAAATTCACCGGTCACCCAAATGGGATAACCGTGTTGCAAAGAATCGGAGTTGGTTTATTTTTATCTATACTCACAATGGTTGTTTCGGCTCTTGTAGAAACGAAAAGGGTTAATGTTGCTAAAAGTCACGGTCTAATAGACGATCAAAGTGCAATCCTACCAATGTATATTTGGTGGTTGCTTCCTCAATATATGATCACCGGAATCTCTGATGCGTTTACTATCGTTGGATTACAAGAAATTTTTTACGATCAAATGCCGGATGGATTGAGAAGTTTGGGAGCCGCGGCGTATATAAGTATAGTAGGAGTTGGAAGCTTTGTTAGTAACATTATAATTGAAGTTATTGAGGCAATTAGTGCAAAAGCTGGTGAGAAATGGCTGGGAGATAACATCAATAGGGCACACCTTGATGATTATTATTGGGTTATGGCTGTGTTAAGTGCTGTTAATTTGGGTGTTTATATGTGGATTGCAAAGTGTTTTGAGTATAAAAAGGTAGATGGAGATGAAAGAAGTAACCAAGAGGGTTCTGGCTACAATAGATATCGTTCTGGAGTGTAG
Protein sequence

>Msa1282270

MADSPSKSKSNSLIHHSTTKKGGWNAAIFIIFVEFAERFAYQGLASNLINYLTKFLNEPTTTAVKNVNTWVGVSSLFPLLGGFIADSYLGRFNTILLSSLIYLVGMIFLTLSVSALRHKTLFFFALYVLSIGEGGHKPCVQTFAADQFDDDTPEEKDAKSSFFNWWYLGIVAGSTAAVFIPVYLQDNVGWGVGLGVLAGVLALALALFLLGIKRYRKESPTGSPFTRLAQVFVAAVRKWRVQDTLLHSNNFCHSEEEKDEPHHVHVRPKYHTLLHTNQYRFLDKAAIIDEVDSSNKTRNPWRLCSVTQVEEVKLVLRLIPIWLTCLMFTVVQAQVHTYFTKQGGTLIHTLGSKFQFPPASLQGLVGVTILFVVPIYDRVFVPLARKFTGHPNGITVLQRIGVGLFLSILTMVVSALVETKRVNVAKSHGLIDDQSAILPMYIWWLLPQYMITGISDAFTIVGLQEIFYDQMPDGLRSLGAAAYISIVGVGSFVSNIIIEVIEAISAKAGEKWLGDNINRAHLDDYYWVMAVLSAVNLGVYMWIAKCFEYKKVDGDERSNQEGSGYNRYRSGV*