Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1282790 | G7LIE6 | 94.771 | 306 | 16 | 0 | 1 | 306 | 1 | 306 | 0.0 | 617 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1241580 | Msa1282790 | 0.837446 | 5.171926e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1282790 | MtrunA17_Chr8g0354231 | 94.771 | 306 | 16 | 0 | 1 | 306 | 1 | 306 | 0.0 | 617 |
| Msa1282790 | MtrunA17_Chr3g0093841 | 30.323 | 310 | 185 | 5 | 16 | 300 | 512 | 815 | 4.92e-37 | 140 |
| Msa1282790 | MtrunA17_Chr3g0093841 | 37.681 | 138 | 83 | 2 | 12 | 147 | 342 | 478 | 2.89e-23 | 100 |
| Msa1282790 | MtrunA17_Chr3g0093841 | 38.519 | 135 | 82 | 1 | 15 | 149 | 20 | 153 | 6.37e-23 | 99.0 |
| Msa1282790 | MtrunA17_Chr3g0093841 | 36.842 | 133 | 83 | 1 | 15 | 147 | 185 | 316 | 4.62e-22 | 96.7 |
| Msa1282790 | MtrunA17_Chr7g0264841 | 33.071 | 127 | 85 | 0 | 21 | 147 | 38 | 164 | 2.07e-18 | 84.0 |
| Msa1282790 | MtrunA17_Chr3g0087491 | 27.667 | 300 | 171 | 10 | 26 | 299 | 1 | 280 | 7.04e-17 | 79.3 |
| Msa1282790 | MtrunA17_Chr1g0176881 | 33.077 | 130 | 86 | 1 | 22 | 151 | 25 | 153 | 1.88e-16 | 79.7 |
| Msa1282790 | MtrunA17_Chr1g0176881 | 24.590 | 122 | 91 | 1 | 20 | 141 | 194 | 314 | 2.75e-11 | 64.3 |
| Msa1282790 | MtrunA17_Chr8g0360141 | 27.368 | 285 | 169 | 9 | 26 | 287 | 1 | 270 | 8.48e-16 | 76.3 |
| Msa1282790 | MtrunA17_Chr5g0405761 | 22.064 | 281 | 200 | 6 | 22 | 298 | 53 | 318 | 2.69e-11 | 63.5 |
| Msa1282790 | MtrunA17_Chr7g0238661 | 34.783 | 92 | 60 | 0 | 26 | 117 | 1 | 92 | 3.28e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1282790 | AT4G02550.1 | 63.518 | 307 | 111 | 1 | 1 | 306 | 1 | 307 | 2.10e-140 | 399 |
| Msa1282790 | AT4G02550.5 | 63.518 | 307 | 111 | 1 | 1 | 306 | 1 | 307 | 2.10e-140 | 399 |
| Msa1282790 | AT4G02550.3 | 63.518 | 307 | 111 | 1 | 1 | 306 | 16 | 322 | 1.15e-139 | 397 |
| Msa1282790 | AT4G02550.2 | 60.784 | 306 | 92 | 1 | 1 | 306 | 1 | 278 | 1.05e-131 | 375 |
| Msa1282790 | AT4G02550.4 | 60.784 | 306 | 92 | 1 | 1 | 306 | 1 | 278 | 1.05e-131 | 375 |
| Msa1282790 | AT4G02210.1 | 27.875 | 287 | 167 | 11 | 20 | 302 | 184 | 434 | 1.20e-22 | 97.8 |
| Msa1282790 | AT4G02210.1 | 33.071 | 127 | 83 | 2 | 15 | 140 | 7 | 132 | 1.22e-16 | 80.5 |
| Msa1282790 | AT4G02210.2 | 27.875 | 287 | 167 | 11 | 20 | 302 | 184 | 434 | 1.20e-22 | 97.8 |
| Msa1282790 | AT4G02210.2 | 33.071 | 127 | 83 | 2 | 15 | 140 | 7 | 132 | 1.22e-16 | 80.5 |
| Msa1282790 | AT2G24960.2 | 36.567 | 134 | 84 | 1 | 20 | 153 | 325 | 457 | 7.81e-22 | 96.3 |
| Msa1282790 | AT2G24960.2 | 33.898 | 118 | 77 | 1 | 20 | 137 | 509 | 625 | 4.30e-16 | 79.3 |
| Msa1282790 | AT2G24960.2 | 31.933 | 119 | 80 | 1 | 22 | 140 | 172 | 289 | 5.06e-14 | 73.2 |
| Msa1282790 | AT2G24960.2 | 26.154 | 130 | 95 | 1 | 22 | 151 | 15 | 143 | 9.43e-12 | 66.2 |
| Msa1282790 | AT2G24960.1 | 31.210 | 157 | 84 | 2 | 20 | 153 | 325 | 480 | 2.55e-17 | 82.8 |
| Msa1282790 | AT2G24960.1 | 33.898 | 118 | 77 | 1 | 20 | 137 | 532 | 648 | 5.38e-16 | 79.0 |
| Msa1282790 | AT2G24960.1 | 31.933 | 119 | 80 | 1 | 22 | 140 | 172 | 289 | 6.93e-14 | 72.4 |
| Msa1282790 | AT2G24960.1 | 26.154 | 130 | 95 | 1 | 22 | 151 | 15 | 143 | 1.04e-11 | 65.9 |
Find 81 sgRNAs with CRISPR-Local
Find 372 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTTGACTTACAATTCT+AGG | 0.200157 | 8_3:-23671628 | Msa1282790:CDS |
| CACTCAATCATCTCCGTATC+TGG | 0.252146 | 8_3:+23672269 | None:intergenic |
| CGTTTAGGAAGTTGTCTTAT+AGG | 0.277741 | 8_3:+23671854 | None:intergenic |
| TTCGTGTATAGAATTTATTT+TGG | 0.308859 | 8_3:-23671537 | Msa1282790:three_prime_UTR |
| TGATACCTCTGAGCTGTTAC+AGG | 0.345222 | 8_3:-23671735 | Msa1282790:CDS |
| AAGAAGGCTCTGGCTTTGAT+AGG | 0.359625 | 8_3:+23671644 | None:intergenic |
| CATTATAGCCATCTGGAATC+TGG | 0.360946 | 8_3:+23671891 | None:intergenic |
| TACAATGGGCCTCCTGAGTA+TGG | 0.365504 | 8_3:-23671914 | Msa1282790:CDS |
| ACAATCTAATTCTCGTAATC+TGG | 0.369353 | 8_3:-23676525 | Msa1282790:intron |
| AGTGTGATCACGACGAGCTT+TGG | 0.375793 | 8_3:-23672250 | Msa1282790:CDS |
| TTCATCTTTGCCCAACGTCT+TGG | 0.403612 | 8_3:+23672043 | None:intergenic |
| GACGGTTCTGGAAAGTTAGA+TGG | 0.417310 | 8_3:+23676585 | None:intergenic |
| TTTGCCTGCTTATGGATGTT+GGG | 0.419217 | 8_3:-23671215 | Msa1282790:three_prime_UTR |
| GGAAAGTTAGATGGATAGAA+AGG | 0.420406 | 8_3:+23676594 | None:intergenic |
| CAGGCTGTGATGGAGATAGA+TGG | 0.427601 | 8_3:-23671716 | Msa1282790:CDS |
| TGTATATAGATTCCAAAGAT+AGG | 0.432140 | 8_3:-23671451 | Msa1282790:three_prime_UTR |
| GGAGTGAAGGAAGACGGTTC+TGG | 0.435711 | 8_3:+23676573 | None:intergenic |
| CTCACAAAGAGTTATGAAAT+AGG | 0.437412 | 8_3:+23671268 | None:intergenic |
| TCTGAGCTACGAGACCGTTT+AGG | 0.440074 | 8_3:+23671839 | None:intergenic |
| AGACGCATCAGCGGCGTCAA+TGG | 0.442785 | 8_3:+23676552 | None:intergenic |
| CTATAAGACAACTTCCTAAA+CGG | 0.443768 | 8_3:-23671853 | Msa1282790:CDS |
| TCACTCATGCTTTCTGAACT+AGG | 0.446951 | 8_3:+23671956 | None:intergenic |
| AACTGAATTCATGTATATGT+TGG | 0.477165 | 8_3:-23671160 | Msa1282790:three_prime_UTR |
| GGAGGCTCATTATAGCCATC+TGG | 0.481405 | 8_3:+23671884 | None:intergenic |
| AATTAAAGATATTCTCAGTC+AGG | 0.485189 | 8_3:-23672309 | Msa1282790:CDS |
| GGCATCAAGCATCCGACGAT+TGG | 0.491409 | 8_3:-23671789 | Msa1282790:CDS |
| TGGGAGCTTTGTTGCTGTGA+AGG | 0.496292 | 8_3:-23671196 | Msa1282790:three_prime_UTR |
| CCTAGAATTGTAAGTCAAGA+AGG | 0.504667 | 8_3:+23671628 | None:intergenic |
| TTATCAAGCTCCAAGACGTT+GGG | 0.506244 | 8_3:-23672053 | Msa1282790:CDS |
| TCAATGAGGCACTTATCCAT+TGG | 0.510566 | 8_3:+23672494 | None:intergenic |
| GAAAGTTAGATGGATAGAAA+GGG | 0.522156 | 8_3:+23676595 | None:intergenic |
| TAAGTGCCTCATTGAAGCCT+TGG | 0.530078 | 8_3:-23672486 | Msa1282790:CDS |
| AGCTCCCAACATCCATAAGC+AGG | 0.531782 | 8_3:+23671211 | None:intergenic |
| ATTGTAAGTCAAGAAGGCTC+TGG | 0.533058 | 8_3:+23671634 | None:intergenic |
| AAGACGTTGGGCAAAGATGA+AGG | 0.537087 | 8_3:-23672041 | Msa1282790:CDS |
| AGTTGTCTTATAGGTACCAC+TGG | 0.541732 | 8_3:+23671863 | None:intergenic |
| GACTGAAGACGCTGAAGAAG+AGG | 0.554159 | 8_3:-23672340 | Msa1282790:CDS |
| TCTGGAATCTGGCCATACTC+AGG | 0.556452 | 8_3:+23671902 | None:intergenic |
| AGAAGGCTCTGGCTTTGATA+GGG | 0.562143 | 8_3:+23671645 | None:intergenic |
| TGAGCTGTTACAGGCTGTGA+TGG | 0.562656 | 8_3:-23671726 | Msa1282790:CDS |
| TGATCTGCAAGGGCAAAGAA+AGG | 0.563961 | 8_3:-23672555 | Msa1282790:CDS |
| GTAATCTGCAAGGTCGAAAG+AGG | 0.567020 | 8_3:+23671304 | None:intergenic |
| TAGGCACATCCAGATGCAAA+AGG | 0.570306 | 8_3:-23672130 | Msa1282790:CDS |
| GAGGCACTTATCCATTGGAA+TGG | 0.574506 | 8_3:+23672499 | None:intergenic |
| AAAGATATTCTCAGTCAGGA+TGG | 0.576667 | 8_3:-23672305 | Msa1282790:CDS |
| ATGGAACTGAGTCATACAAT+GGG | 0.577052 | 8_3:-23671928 | Msa1282790:CDS |
| CGATCGAATCAGCCAATCGT+CGG | 0.579219 | 8_3:+23671777 | None:intergenic |
| ATTATCAAGCTCCAAGACGT+TGG | 0.583817 | 8_3:-23672054 | Msa1282790:CDS |
| TGTGATGGAGATAGATGGGT+TGG | 0.587510 | 8_3:-23671711 | Msa1282790:CDS |
| CTATTTCATAACTCTTTGTG+AGG | 0.589648 | 8_3:-23671267 | Msa1282790:three_prime_UTR |
| GGCTCTGGCTTTGATAGGGT+CGG | 0.592268 | 8_3:+23671649 | None:intergenic |
| CCAGATGCAAAAGGATTCCG+TGG | 0.594898 | 8_3:-23672121 | Msa1282790:CDS |
| GAACAACTTAAAATTGTCTG+TGG | 0.595274 | 8_3:-23672079 | Msa1282790:CDS |
| ACGAAAACGCACAATACACT+TGG | 0.595581 | 8_3:+23671555 | None:intergenic |
| TTCTGAACTAGGAGATGCAA+AGG | 0.595739 | 8_3:+23671967 | None:intergenic |
| TGTTGTGTGGTCCATTCCAA+TGG | 0.596105 | 8_3:-23672510 | Msa1282790:CDS |
| GCAAAGATGAAGGATGGTAA+TGG | 0.597717 | 8_3:-23672031 | Msa1282790:CDS |
| CAGCGGCGTCAATGGAGTGA+AGG | 0.599016 | 8_3:+23676560 | None:intergenic |
| ATGGAGCACTGTGATCTGCA+AGG | 0.609971 | 8_3:-23672566 | Msa1282790:CDS |
| TTTCGAGTGGAATCCAGATA+CGG | 0.611897 | 8_3:-23672282 | Msa1282790:CDS |
| TGAACTAGGAGATGCAAAGG+AGG | 0.621465 | 8_3:+23671970 | None:intergenic |
| GTCAATGGAGTGAAGGAAGA+CGG | 0.622525 | 8_3:+23676567 | None:intergenic |
| TGGAGCACTGTGATCTGCAA+GGG | 0.624868 | 8_3:-23672565 | Msa1282790:CDS |
| AGGCTGTGATGGAGATAGAT+GGG | 0.626512 | 8_3:-23671715 | Msa1282790:CDS |
| TCAGTCAGGATGGTTTCGAG+TGG | 0.633366 | 8_3:-23672295 | Msa1282790:CDS |
| ATTGTAGAGAGACGCATCAG+CGG | 0.634507 | 8_3:+23676543 | None:intergenic |
| GATGGAACTGAGTCATACAA+TGG | 0.636834 | 8_3:-23671929 | Msa1282790:CDS |
| GAGTATGGCCAGATTCCAGA+TGG | 0.636898 | 8_3:-23671899 | Msa1282790:CDS |
| CGTTGGGCAAAGATGAAGGA+TGG | 0.637907 | 8_3:-23672037 | Msa1282790:CDS |
| GAAAGCATGAGTGATACAGA+TGG | 0.642873 | 8_3:-23671947 | Msa1282790:CDS |
| TGGCTATAATGAGCCTCCAG+TGG | 0.650424 | 8_3:-23671879 | Msa1282790:CDS |
| GGAATCTGGCCATACTCAGG+AGG | 0.660169 | 8_3:+23671905 | None:intergenic |
| GAAGGATGGTAATGGTCTAG+TGG | 0.662589 | 8_3:-23672023 | Msa1282790:CDS |
| GGATGGTAATGGTCTAGTGG+TGG | 0.663597 | 8_3:-23672020 | Msa1282790:CDS |
| CACAGCCTGTAACAGCTCAG+AGG | 0.672716 | 8_3:+23671730 | None:intergenic |
| ATAAGGGAAGAAATGTTGTG+TGG | 0.689608 | 8_3:-23672523 | Msa1282790:CDS |
| TGAGAACACCCGTTCAACCG+TGG | 0.692187 | 8_3:+23671512 | None:intergenic |
| GAACAACCAAGGCTTCAATG+AGG | 0.697420 | 8_3:+23672480 | None:intergenic |
| AATGAGTCGAGTAATCTGCA+AGG | 0.703412 | 8_3:+23671294 | None:intergenic |
| TGTCTTATAGGTACCACTGG+AGG | 0.728385 | 8_3:+23671866 | None:intergenic |
| GCACGATGCATTGATGACAG+TGG | 0.754626 | 8_3:-23671810 | Msa1282790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAGTTAAATTTAATAAATA+AGG | - | chr8_3:23671801-23671820 | Msa1282790:CDS | 10.0% |
| !! | AAATGAAAAATAATTAGAAT+AGG | - | chr8_3:23673490-23673509 | Msa1282790:intron | 10.0% |
| !! | TTAAAAAGAAAATAACAATA+AGG | - | chr8_3:23674922-23674941 | Msa1282790:intron | 10.0% |
| !! | CAATTATACTATTATTACAA+TGG | + | chr8_3:23671402-23671421 | None:intergenic | 15.0% |
| !!! | AATTTTTATATGGACTAAAT+GGG | + | chr8_3:23672082-23672101 | None:intergenic | 15.0% |
| !! | ATTTCATTTAAGAAGAAAAA+TGG | + | chr8_3:23674288-23674307 | None:intergenic | 15.0% |
| !!! | TTTAAAACTATCAATAAAAC+AGG | + | chr8_3:23674391-23674410 | None:intergenic | 15.0% |
| !!! | GATAGTTTTAAATATTTTAC+AGG | - | chr8_3:23674399-23674418 | Msa1282790:intron | 15.0% |
| !! | ATTATATTTCACCTAAAAAA+AGG | + | chr8_3:23674719-23674738 | None:intergenic | 15.0% |
| !! | AAGAAAGGATATAAAAAATA+AGG | - | chr8_3:23675219-23675238 | Msa1282790:intron | 15.0% |
| !! | AGAAAGGATATAAAAAATAA+GGG | - | chr8_3:23675220-23675239 | Msa1282790:intron | 15.0% |
| !! | AATAAAACTGAAACAATTAG+TGG | + | chr8_3:23671277-23671296 | None:intergenic | 20.0% |
| !! | TATTATTAGAGCTATCAAAA+TGG | - | chr8_3:23671960-23671979 | Msa1282790:CDS | 20.0% |
| !! | ATTATTAGAGCTATCAAAAT+GGG | - | chr8_3:23671961-23671980 | Msa1282790:CDS | 20.0% |
| !!! | CAATTTTTATATGGACTAAA+TGG | + | chr8_3:23672083-23672102 | None:intergenic | 20.0% |
| !!! | TTTTTTGGAATCATTTTTCA+TGG | - | chr8_3:23672270-23672289 | Msa1282790:CDS | 20.0% |
| !! | TACTTTGTATTTGAAAATCA+TGG | - | chr8_3:23672712-23672731 | Msa1282790:intron | 20.0% |
| !! | ACGAAAACATTATATATGAA+AGG | - | chr8_3:23673124-23673143 | Msa1282790:intron | 20.0% |
| !! | AATCATTATCATCGTAAATA+GGG | + | chr8_3:23673775-23673794 | None:intergenic | 20.0% |
| !!! | TGATATGTATATTTTTGGAA+TGG | - | chr8_3:23674222-23674241 | Msa1282790:intron | 20.0% |
| !! | CTAAAAGTTTGTAAATTTCA+TGG | - | chr8_3:23674887-23674906 | Msa1282790:intron | 20.0% |
| !!! | TTCGTGTATAGAATTTATTT+TGG | - | chr8_3:23676222-23676241 | Msa1282790:intron | 20.0% |
| !!! | TCGTGTATAGAATTTATTTT+GGG | - | chr8_3:23676223-23676242 | Msa1282790:intron | 20.0% |
| !!! | TTTAAATTTTTCAGCAAGTT+TGG | - | chr8_3:23676416-23676435 | Msa1282790:intron | 20.0% |
| !! | TACTGCATTAACTACATTTT+GGG | - | chr8_3:23671453-23671472 | Msa1282790:three_prime_UTR | 25.0% |
| !!! | TTAACTACATTTTGGGTTTT+AGG | - | chr8_3:23671460-23671479 | Msa1282790:three_prime_UTR | 25.0% |
| !!! | ATTAACTGAGTTGATTTCAA+CGG | - | chr8_3:23671618-23671637 | Msa1282790:CDS | 25.0% |
| !! | ATGAAAAATTATGGGCTAAT+GGG | + | chr8_3:23672005-23672024 | None:intergenic | 25.0% |
| !! | ATTAGCCCATAATTTTTCAT+GGG | - | chr8_3:23672005-23672024 | Msa1282790:CDS | 25.0% |
| !!! | TTTTTTGGCTTGCTTTTTTA+CGG | + | chr8_3:23672036-23672055 | None:intergenic | 25.0% |
| !!! | AAGAAAGCTCAATTGTTTTT+TGG | + | chr8_3:23672051-23672070 | None:intergenic | 25.0% |
| ! | AAAAAACAATTGAGCTTTCT+TGG | - | chr8_3:23672050-23672069 | Msa1282790:CDS | 25.0% |
| ! | AAAAACAATTGAGCTTTCTT+GGG | - | chr8_3:23672051-23672070 | Msa1282790:CDS | 25.0% |
| ! | AGTCCATATAAAAATTGTGT+TGG | - | chr8_3:23672086-23672105 | Msa1282790:CDS | 25.0% |
| ! | GTCCATATAAAAATTGTGTT+GGG | - | chr8_3:23672087-23672106 | Msa1282790:CDS | 25.0% |
| !! | TTAAGTAGTTATTTCAGACT+TGG | - | chr8_3:23672438-23672457 | Msa1282790:CDS | 25.0% |
| !! | ATAAATTTGAAGCATAGAAG+AGG | - | chr8_3:23672481-23672500 | Msa1282790:CDS | 25.0% |
| !! | TAAATTTGAAGCATAGAAGA+GGG | - | chr8_3:23672482-23672501 | Msa1282790:CDS | 25.0% |
| ! | GAAATCAAAGTGAAAAGTAA+AGG | + | chr8_3:23672552-23672571 | None:intergenic | 25.0% |
| ! | GATTTATAGTCTCAAATATG+TGG | - | chr8_3:23672621-23672640 | Msa1282790:intron | 25.0% |
| ! | ATGTAATGTGGTTGAAATAT+TGG | - | chr8_3:23672652-23672671 | Msa1282790:intron | 25.0% |
| !! | AAAGTATTTATCGTTTCATG+TGG | + | chr8_3:23672698-23672717 | None:intergenic | 25.0% |
| ! | ATAAAAAACCTATTTGAGTG+AGG | + | chr8_3:23672809-23672828 | None:intergenic | 25.0% |
| !!! | TAGAGGGAATTTTTAAAGTT+AGG | - | chr8_3:23672856-23672875 | Msa1282790:intron | 25.0% |
| !!! | AGAGGGAATTTTTAAAGTTA+GGG | - | chr8_3:23672857-23672876 | Msa1282790:intron | 25.0% |
| !!! | TTAGGGGTATTTTACAATTA+GGG | - | chr8_3:23672874-23672893 | Msa1282790:intron | 25.0% |
| ! | CTTCATACTCAATTCTTTAA+TGG | + | chr8_3:23673071-23673090 | None:intergenic | 25.0% |
| ! | TCTTGTATGTCTAGATTAAT+AGG | - | chr8_3:23673405-23673424 | Msa1282790:intron | 25.0% |
| ! | TACTTGCAATAACTATAAGT+CGG | - | chr8_3:23673576-23673595 | Msa1282790:intron | 25.0% |
| ! | GTTGCAAAATAAAAAGGATT+GGG | + | chr8_3:23673711-23673730 | None:intergenic | 25.0% |
| !!! | CAATCCTTTTTATTTTGCAA+CGG | - | chr8_3:23673710-23673729 | Msa1282790:intron | 25.0% |
| ! | AAATCCGTTGCAAAATAAAA+AGG | + | chr8_3:23673717-23673736 | None:intergenic | 25.0% |
| !!! | TTATTTTGCAACGGATTTAT+CGG | - | chr8_3:23673719-23673738 | Msa1282790:intron | 25.0% |
| ! | ATCATTATCATCGTAAATAG+GGG | + | chr8_3:23673774-23673793 | None:intergenic | 25.0% |
| ! | CAATCATTATCATCGTAAAT+AGG | + | chr8_3:23673776-23673795 | None:intergenic | 25.0% |
| !! | CTATTTACGATGATAATGAT+TGG | - | chr8_3:23673774-23673793 | Msa1282790:intron | 25.0% |
| ! | TTAGATTCTGTAACAAGTTT+AGG | - | chr8_3:23673983-23674002 | Msa1282790:intron | 25.0% |
| ! | TAGATTCTGTAACAAGTTTA+GGG | - | chr8_3:23673984-23674003 | Msa1282790:intron | 25.0% |
| ! | CTCTAGTTAAAAGAAGAAAA+TGG | + | chr8_3:23674432-23674451 | None:intergenic | 25.0% |
| !!! | AACCTTAACTTCCTTTTTTT+AGG | - | chr8_3:23674705-23674724 | Msa1282790:intron | 25.0% |
| ! | AAATAAGAACACACAAAGTA+TGG | - | chr8_3:23674816-23674835 | Msa1282790:intron | 25.0% |
| ! | AATAAGAACACACAAAGTAT+GGG | - | chr8_3:23674817-23674836 | Msa1282790:intron | 25.0% |
| !!! | AACTTTTAGCTGAAGAAAAA+GGG | + | chr8_3:23674876-23674895 | None:intergenic | 25.0% |
| !!! | AAACTTTTAGCTGAAGAAAA+AGG | + | chr8_3:23674877-23674896 | None:intergenic | 25.0% |
| ! | AAAATAACAATAAGGAATGC+TGG | - | chr8_3:23674930-23674949 | Msa1282790:intron | 25.0% |
| ! | TCTTCATGTTTAAGTAAATG+AGG | - | chr8_3:23675097-23675116 | Msa1282790:intron | 25.0% |
| ! | CTTCATGTTTAAGTAAATGA+GGG | - | chr8_3:23675098-23675117 | Msa1282790:intron | 25.0% |
| ! | AATTAAAGATATTCTCAGTC+AGG | - | chr8_3:23675450-23675469 | Msa1282790:intron | 25.0% |
| ! | GAATCAAAGAACACTTAAAT+AGG | + | chr8_3:23675603-23675622 | None:intergenic | 25.0% |
| ! | TGTATATAGATTCCAAAGAT+AGG | - | chr8_3:23676308-23676327 | Msa1282790:intron | 25.0% |
| !! | GACTATTTTATACCTATCTT+TGG | + | chr8_3:23676323-23676342 | None:intergenic | 25.0% |
| !!! | ACTTGATCATTTTAGGATTT+AGG | - | chr8_3:23676516-23676535 | Msa1282790:intron | 25.0% |
| !!! | CTTGATCATTTTAGGATTTA+GGG | - | chr8_3:23676517-23676536 | Msa1282790:intron | 25.0% |
| !!! | TTGATCATTTTAGGATTTAG+GGG | - | chr8_3:23676518-23676537 | Msa1282790:intron | 25.0% |
| ! | AACTGAATTCATGTATATGT+TGG | - | chr8_3:23676599-23676618 | Msa1282790:five_prime_UTR | 25.0% |
| GAAAGTTAGATGGATAGAAA+GGG | + | chr8_3:23671167-23671186 | None:intergenic | 30.0% | |
| ACAATCTAATTCTCGTAATC+TGG | - | chr8_3:23671234-23671253 | Msa1282790:three_prime_UTR | 30.0% | |
| ! | CTACTGCATTAACTACATTT+TGG | - | chr8_3:23671452-23671471 | Msa1282790:three_prime_UTR | 30.0% |
| !! | GCATTGATATTCTAAAGTGA+CGG | - | chr8_3:23671853-23671872 | Msa1282790:CDS | 30.0% |
| ATGTGACAAGTATTATGAGA+TGG | - | chr8_3:23671903-23671922 | Msa1282790:CDS | 30.0% | |
| ! | CATGAAAAATTATGGGCTAA+TGG | + | chr8_3:23672006-23672025 | None:intergenic | 30.0% |
| ! | CATTAGCCCATAATTTTTCA+TGG | - | chr8_3:23672004-23672023 | Msa1282790:CDS | 30.0% |
| ! | TTATATGGACTAAATGGGTT+GGG | + | chr8_3:23672077-23672096 | None:intergenic | 30.0% |
| ! | TTTATATGGACTAAATGGGT+TGG | + | chr8_3:23672078-23672097 | None:intergenic | 30.0% |
| ! | AGCCCAACACAATTTTTATA+TGG | + | chr8_3:23672092-23672111 | None:intergenic | 30.0% |
| GATATCAGAGTGAACATTAT+TGG | - | chr8_3:23672202-23672221 | Msa1282790:intron | 30.0% | |
| CTATAGTAACATCAAAGTCT+TGG | - | chr8_3:23672516-23672535 | Msa1282790:CDS | 30.0% | |
| AACAGAGAATAAGCACAATT+AGG | - | chr8_3:23672593-23672612 | Msa1282790:intron | 30.0% | |
| ACAGAGAATAAGCACAATTA+GGG | - | chr8_3:23672594-23672613 | Msa1282790:intron | 30.0% | |
| TAATGTGGTTGAAATATTGG+TGG | - | chr8_3:23672655-23672674 | Msa1282790:intron | 30.0% | |
| ! | TGTGTTGTGTTATTACATTG+AGG | + | chr8_3:23672744-23672763 | None:intergenic | 30.0% |
| CATCTGCTAAATAAAGAAAG+AGG | + | chr8_3:23672836-23672855 | None:intergenic | 30.0% | |
| ! | TCTTTATTTAGCAGATGTAG+AGG | - | chr8_3:23672839-23672858 | Msa1282790:intron | 30.0% |
| ! | CTTTATTTAGCAGATGTAGA+GGG | - | chr8_3:23672840-23672859 | Msa1282790:intron | 30.0% |
| !!! | GAGGGAATTTTTAAAGTTAG+GGG | - | chr8_3:23672858-23672877 | Msa1282790:intron | 30.0% |
| !!! | GTTAGGGGTATTTTACAATT+AGG | - | chr8_3:23672873-23672892 | Msa1282790:intron | 30.0% |
| !!! | TAGGGGTATTTTACAATTAG+GGG | - | chr8_3:23672875-23672894 | Msa1282790:intron | 30.0% |
| ACTCAATTCTTTAATGGAGA+AGG | + | chr8_3:23673065-23673084 | None:intergenic | 30.0% | |
| ! | TTGAGTATGAAGATTTTCTC+AGG | - | chr8_3:23673079-23673098 | Msa1282790:intron | 30.0% |
| !!! | AGACTTTTCTTTGTTGTTGA+TGG | - | chr8_3:23673203-23673222 | Msa1282790:intron | 30.0% |
| ! | GTTTTTCTTTAATGCAGAAG+TGG | - | chr8_3:23673234-23673253 | Msa1282790:intron | 30.0% |
| CGTTGCAAAATAAAAAGGAT+TGG | + | chr8_3:23673712-23673731 | None:intergenic | 30.0% | |
| !! | TATTTTGCAACGGATTTATC+GGG | - | chr8_3:23673720-23673739 | Msa1282790:intron | 30.0% |
| !! | GATGATAATGATTGGTAATG+AGG | - | chr8_3:23673782-23673801 | Msa1282790:intron | 30.0% |
| !! | ATAATGATTGGTAATGAGGA+AGG | - | chr8_3:23673786-23673805 | Msa1282790:intron | 30.0% |
| TTTATTATGGCCTTTATGAC+GGG | + | chr8_3:23673841-23673860 | None:intergenic | 30.0% | |
| CTTTATTATGGCCTTTATGA+CGG | + | chr8_3:23673842-23673861 | None:intergenic | 30.0% | |
| GTCTGTTGTGATCTTTATTA+TGG | + | chr8_3:23673854-23673873 | None:intergenic | 30.0% | |
| ! | CATAATGCCAACTATTTTAC+AGG | - | chr8_3:23673873-23673892 | Msa1282790:intron | 30.0% |
| CTTGTTACAGAATCTAAATC+AGG | + | chr8_3:23673980-23673999 | None:intergenic | 30.0% | |
| AGATTCTGTAACAAGTTTAG+GGG | - | chr8_3:23673985-23674004 | Msa1282790:intron | 30.0% | |
| ! | GGGTGTGATATGTATATTTT+TGG | - | chr8_3:23674217-23674236 | Msa1282790:intron | 30.0% |
| !!! | TGTATATTTTTGGAATGGAC+TGG | - | chr8_3:23674227-23674246 | Msa1282790:intron | 30.0% |
| GTCAGTATACATAAAAACAC+TGG | - | chr8_3:23674515-23674534 | Msa1282790:intron | 30.0% | |
| !!! | AGTGTTCTTTTTTCTGAACT+AGG | + | chr8_3:23674645-23674664 | None:intergenic | 30.0% |
| TAGTTCAGAAAAAAGAACAC+TGG | - | chr8_3:23674644-23674663 | Msa1282790:intron | 30.0% | |
| CACCTAAAAAAAGGAAGTTA+AGG | + | chr8_3:23674710-23674729 | None:intergenic | 30.0% | |
| AATTTAATACCCTCATTGAC+TGG | - | chr8_3:23674762-23674781 | Msa1282790:intron | 30.0% | |
| TACAAATGCACATGAAGTTA+AGG | + | chr8_3:23674793-23674812 | None:intergenic | 30.0% | |
| TTAAACATGAAGAAAAGCCT+GGG | + | chr8_3:23675090-23675109 | None:intergenic | 30.0% | |
| !!! | ATTTTTTGCTTGAACAACCA+AGG | + | chr8_3:23675293-23675312 | None:intergenic | 30.0% |
| TTGGTTGTTCAAGCAAAAAA+TGG | - | chr8_3:23675292-23675311 | Msa1282790:intron | 30.0% | |
| ! | TAAGTGTTCTTTGATTCGTT+TGG | - | chr8_3:23675606-23675625 | Msa1282790:intron | 30.0% |
| !! | ACATCTCTATTTGTTTTCCA+CGG | + | chr8_3:23675658-23675677 | None:intergenic | 30.0% |
| GAACAACTTAAAATTGTCTG+TGG | - | chr8_3:23675680-23675699 | Msa1282790:intron | 30.0% | |
| CTATAAGACAACTTCCTAAA+CGG | - | chr8_3:23675906-23675925 | Msa1282790:intron | 30.0% | |
| ! | TATATCTTTTCAGACAGTTC+TGG | - | chr8_3:23676164-23676183 | Msa1282790:intron | 30.0% |
| !!! | TAGAATTTATTTTGGGACCA+CGG | - | chr8_3:23676230-23676249 | Msa1282790:intron | 30.0% |
| CTCACAAAGAGTTATGAAAT+AGG | + | chr8_3:23676494-23676513 | None:intergenic | 30.0% | |
| CTATTTCATAACTCTTTGTG+AGG | - | chr8_3:23676492-23676511 | Msa1282790:intron | 30.0% | |
| GGAAAGTTAGATGGATAGAA+AGG | + | chr8_3:23671168-23671187 | None:intergenic | 35.0% | |
| TTTAACTACTCAACCCACTT+AGG | + | chr8_3:23671790-23671809 | None:intergenic | 35.0% | |
| TGACAAGTATTATGAGATGG+AGG | - | chr8_3:23671906-23671925 | Msa1282790:CDS | 35.0% | |
| GACAAGTATTATGAGATGGA+GGG | - | chr8_3:23671907-23671926 | Msa1282790:CDS | 35.0% | |
| CCAAGCCCATGAAAAATTAT+GGG | + | chr8_3:23672013-23672032 | None:intergenic | 35.0% | |
| !! | CACATAGAGATGTTGATAGT+GGG | + | chr8_3:23672137-23672156 | None:intergenic | 35.0% |
| ! | TCACATAGAGATGTTGATAG+TGG | + | chr8_3:23672138-23672157 | None:intergenic | 35.0% |
| AGTGAACATTATTGGAGTAG+CGG | - | chr8_3:23672210-23672229 | Msa1282790:intron | 35.0% | |
| !!! | GTTTTGTTTGTTAGCTGCTT+AGG | - | chr8_3:23672330-23672349 | Msa1282790:CDS | 35.0% |
| ! | CAGTTTCAGTTGACATTTTG+AGG | - | chr8_3:23672357-23672376 | Msa1282790:CDS | 35.0% |
| !!! | TTCAGTTGACATTTTGAGGT+TGG | - | chr8_3:23672361-23672380 | Msa1282790:CDS | 35.0% |
| !!! | TCAGTTGACATTTTGAGGTT+GGG | - | chr8_3:23672362-23672381 | Msa1282790:CDS | 35.0% |
| ! | GTAGTTATTTCAGACTTGGT+CGG | - | chr8_3:23672442-23672461 | Msa1282790:CDS | 35.0% |
| ! | TAGTTATTTCAGACTTGGTC+GGG | - | chr8_3:23672443-23672462 | Msa1282790:CDS | 35.0% |
| GTAACATCAAAGTCTTGGTA+TGG | - | chr8_3:23672521-23672540 | Msa1282790:CDS | 35.0% | |
| ! | GGTTGAAATATTGGTGGTTA+TGG | - | chr8_3:23672661-23672680 | Msa1282790:intron | 35.0% |
| ! | AGATTTTCTCAGGAAAGCAA+TGG | - | chr8_3:23673089-23673108 | Msa1282790:intron | 35.0% |
| !!! | GAAAAAGCATTTTCACGTGA+AGG | - | chr8_3:23673150-23673169 | Msa1282790:intron | 35.0% |
| !!! | CTTTTCTTTGTTGTTGATGG+CGG | - | chr8_3:23673206-23673225 | Msa1282790:intron | 35.0% |
| TGTCTAGATTAATAGGCACT+AGG | - | chr8_3:23673412-23673431 | Msa1282790:intron | 35.0% | |
| CAAAGCAGCAAAAAGATAGT+GGG | + | chr8_3:23673440-23673459 | None:intergenic | 35.0% | |
| TCAAAGCAGCAAAAAGATAG+TGG | + | chr8_3:23673441-23673460 | None:intergenic | 35.0% | |
| AACTATAAGTCGGTTAGACT+CGG | - | chr8_3:23673586-23673605 | Msa1282790:intron | 35.0% | |
| GGATTGTAAAACACAACTCT+CGG | + | chr8_3:23673616-23673635 | None:intergenic | 35.0% | |
| CAAAACTGGAAAGTTCAGTT+TGG | + | chr8_3:23673662-23673681 | None:intergenic | 35.0% | |
| CAAAATAAAAAGGATTGGGC+GGG | + | chr8_3:23673707-23673726 | None:intergenic | 35.0% | |
| GCAAAATAAAAAGGATTGGG+CGG | + | chr8_3:23673708-23673727 | None:intergenic | 35.0% | |
| AAAACAAGTTCCCGTCATAA+AGG | - | chr8_3:23673828-23673847 | Msa1282790:intron | 35.0% | |
| AGAAAGACTGTGAAAACTAC+CGG | + | chr8_3:23673922-23673941 | None:intergenic | 35.0% | |
| GATAACGCTCACATCTTTAT+GGG | + | chr8_3:23674022-23674041 | None:intergenic | 35.0% | |
| ATGCAATCCTTTGTAGGATT+TGG | + | chr8_3:23674044-23674063 | None:intergenic | 35.0% | |
| AATCCTACAAAGGATTGCAT+AGG | - | chr8_3:23674044-23674063 | Msa1282790:intron | 35.0% | |
| ATAGGATCCATCACTAAAGA+TGG | - | chr8_3:23674062-23674081 | Msa1282790:intron | 35.0% | |
| TAGGATCCATCACTAAAGAT+GGG | - | chr8_3:23674063-23674082 | Msa1282790:intron | 35.0% | |
| ATACATAAAAACACTGGTCC+TGG | - | chr8_3:23674521-23674540 | Msa1282790:intron | 35.0% | |
| CTGAAGAAAAAGGGAGAAAA+TGG | + | chr8_3:23674867-23674886 | None:intergenic | 35.0% | |
| GTGCTATAAATCTCCTATCA+TGG | - | chr8_3:23674952-23674971 | Msa1282790:intron | 35.0% | |
| CTTAAACATGAAGAAAAGCC+TGG | + | chr8_3:23675091-23675110 | None:intergenic | 35.0% | |
| ATAAGGGAAGAAATGTTGTG+TGG | - | chr8_3:23675236-23675255 | Msa1282790:intron | 35.0% | |
| AAAGATATTCTCAGTCAGGA+TGG | - | chr8_3:23675454-23675473 | Msa1282790:intron | 35.0% | |
| ! | TGTTCTTTGATTCGTTTGGT+AGG | - | chr8_3:23675610-23675629 | Msa1282790:intron | 35.0% |
| ATGGAACTGAGTCATACAAT+GGG | - | chr8_3:23675831-23675850 | Msa1282790:intron | 35.0% | |
| CGTTTAGGAAGTTGTCTTAT+AGG | + | chr8_3:23675908-23675927 | None:intergenic | 35.0% | |
| CCTAGAATTGTAAGTCAAGA+AGG | + | chr8_3:23676134-23676153 | None:intergenic | 35.0% | |
| CCTTCTTGACTTACAATTCT+AGG | - | chr8_3:23676131-23676150 | Msa1282790:intron | 35.0% | |
| ! | GTGAGGAACTTGATCATTTT+AGG | - | chr8_3:23676509-23676528 | Msa1282790:intron | 35.0% |
| TTAGCCCACTCAAATTAGCA+CGG | - | chr8_3:23671687-23671706 | Msa1282790:CDS | 40.0% | |
| ! | GAATTGAATCTGAGACCTTG+AGG | - | chr8_3:23671714-23671733 | Msa1282790:CDS | 40.0% |
| !! | TAGCTCAGTGGTATTGACTT+GGG | + | chr8_3:23671766-23671785 | None:intergenic | 40.0% |
| !! | TTAGCTCAGTGGTATTGACT+TGG | + | chr8_3:23671767-23671786 | None:intergenic | 40.0% |
| ! | CCCATAATTTTTCATGGGCT+TGG | - | chr8_3:23672010-23672029 | Msa1282790:CDS | 40.0% |
| GCCAAGCCCATGAAAAATTA+TGG | + | chr8_3:23672014-23672033 | None:intergenic | 40.0% | |
| AGAGTTTCTTCTAGGTCAAG+TGG | - | chr8_3:23672234-23672253 | Msa1282790:intron | 40.0% | |
| !!! | GGCTGACAGTGTTCATTTTT+TGG | - | chr8_3:23672255-23672274 | Msa1282790:CDS | 40.0% |
| GAATAAGCACAATTAGGGAG+TGG | - | chr8_3:23672599-23672618 | Msa1282790:intron | 40.0% | |
| GTGGAGCACATTATGTAATG+TGG | - | chr8_3:23672640-23672659 | Msa1282790:intron | 40.0% | |
| AATGAGTGTAACAGCTGAGT+TGG | - | chr8_3:23672763-23672782 | Msa1282790:intron | 40.0% | |
| TTCAAGGTCCTCACTCAAAT+AGG | - | chr8_3:23672798-23672817 | Msa1282790:intron | 40.0% | |
| TTACAATTAGGGGTGAGCAT+CGG | - | chr8_3:23672885-23672904 | Msa1282790:intron | 40.0% | |
| CTTCGGTTTCACTTGAGATT+GGG | + | chr8_3:23672940-23672959 | None:intergenic | 40.0% | |
| TCTTCGGTTTCACTTGAGAT+TGG | + | chr8_3:23672941-23672960 | None:intergenic | 40.0% | |
| GGGTCTCTTTATTCTCTCTT+CGG | + | chr8_3:23672957-23672976 | None:intergenic | 40.0% | |
| !! | GTTAGACGGTTCGGTTAATT+CGG | - | chr8_3:23673033-23673052 | Msa1282790:intron | 40.0% |
| ACACAATGATGTGACTTGAC+AGG | - | chr8_3:23673461-23673480 | Msa1282790:intron | 40.0% | |
| ! | AGTTCAGTTTGGCATGGTTT+TGG | + | chr8_3:23673651-23673670 | None:intergenic | 40.0% |
| GGATAACGCTCACATCTTTA+TGG | + | chr8_3:23674023-23674042 | None:intergenic | 40.0% | |
| GCGTTATCCAAATCCTACAA+AGG | - | chr8_3:23674034-23674053 | Msa1282790:intron | 40.0% | |
| GATCCTATGCAATCCTTTGT+AGG | + | chr8_3:23674050-23674069 | None:intergenic | 40.0% | |
| AATGCTCCCATCTTTAGTGA+TGG | + | chr8_3:23674072-23674091 | None:intergenic | 40.0% | |
| ATTAGATGCATGTGAGGTGT+GGG | - | chr8_3:23674197-23674216 | Msa1282790:intron | 40.0% | |
| AAGGTTTCACCAGTCAATGA+GGG | + | chr8_3:23674774-23674793 | None:intergenic | 40.0% | |
| TAAGGTTTCACCAGTCAATG+AGG | + | chr8_3:23674775-23674794 | None:intergenic | 40.0% | |
| GAGAGATAGAGATCAACTTC+AGG | - | chr8_3:23675014-23675033 | Msa1282790:intron | 40.0% | |
| AACTTCAGGACTCAATCCTA+TGG | - | chr8_3:23675028-23675047 | Msa1282790:intron | 40.0% | |
| !! | AAAGTTGGTACTGTGTGACT+AGG | + | chr8_3:23675057-23675076 | None:intergenic | 40.0% |
| TTGCTACATGCAAACAACAC+AGG | + | chr8_3:23675174-23675193 | None:intergenic | 40.0% | |
| !! | GTGTTGTTTGCATGTAGCAA+TGG | - | chr8_3:23675174-23675193 | Msa1282790:intron | 40.0% |
| ! | TCAATGAGGCACTTATCCAT+TGG | + | chr8_3:23675268-23675287 | None:intergenic | 40.0% |
| ! | TTTCGAGTGGAATCCAGATA+CGG | - | chr8_3:23675477-23675496 | Msa1282790:intron | 40.0% |
| ATTATCAAGCTCCAAGACGT+TGG | - | chr8_3:23675705-23675724 | Msa1282790:intron | 40.0% | |
| TTATCAAGCTCCAAGACGTT+GGG | - | chr8_3:23675706-23675725 | Msa1282790:intron | 40.0% | |
| GCAAAGATGAAGGATGGTAA+TGG | - | chr8_3:23675728-23675747 | Msa1282790:intron | 40.0% | |
| TTCTGAACTAGGAGATGCAA+AGG | + | chr8_3:23675795-23675814 | None:intergenic | 40.0% | |
| TCACTCATGCTTTCTGAACT+AGG | + | chr8_3:23675806-23675825 | None:intergenic | 40.0% | |
| ! | GAAAGCATGAGTGATACAGA+TGG | - | chr8_3:23675812-23675831 | Msa1282790:intron | 40.0% |
| GATGGAACTGAGTCATACAA+TGG | - | chr8_3:23675830-23675849 | Msa1282790:intron | 40.0% | |
| ! | CATTATAGCCATCTGGAATC+TGG | + | chr8_3:23675871-23675890 | None:intergenic | 40.0% |
| AGTTGTCTTATAGGTACCAC+TGG | + | chr8_3:23675899-23675918 | None:intergenic | 40.0% | |
| ATTGTAAGTCAAGAAGGCTC+TGG | + | chr8_3:23676128-23676147 | None:intergenic | 40.0% | |
| !! | ATCTTTTCAGACAGTTCTGG+TGG | - | chr8_3:23676167-23676186 | Msa1282790:intron | 40.0% |
| ACGAAAACGCACAATACACT+TGG | + | chr8_3:23676207-23676226 | None:intergenic | 40.0% | |
| AATGAGTCGAGTAATCTGCA+AGG | + | chr8_3:23676468-23676487 | None:intergenic | 40.0% | |
| ! | TTTTGCCTGCTTATGGATGT+TGG | - | chr8_3:23676543-23676562 | Msa1282790:five_prime_UTR | 40.0% |
| TTTGCCTGCTTATGGATGTT+GGG | - | chr8_3:23676544-23676563 | Msa1282790:five_prime_UTR | 40.0% | |
| !! | GACGGTTCTGGAAAGTTAGA+TGG | + | chr8_3:23671177-23671196 | None:intergenic | 45.0% |
| GTCAATGGAGTGAAGGAAGA+CGG | + | chr8_3:23671195-23671214 | None:intergenic | 45.0% | |
| ATTGTAGAGAGACGCATCAG+CGG | + | chr8_3:23671219-23671238 | None:intergenic | 45.0% | |
| TCCTCCGTGCTAATTTGAGT+GGG | + | chr8_3:23671694-23671713 | None:intergenic | 45.0% | |
| ! | TTGAATCTGAGACCTTGAGG+AGG | - | chr8_3:23671717-23671736 | Msa1282790:CDS | 45.0% |
| TACCACTGAGCTAACCTAAG+TGG | - | chr8_3:23671773-23671792 | Msa1282790:CDS | 45.0% | |
| ACCACTGAGCTAACCTAAGT+GGG | - | chr8_3:23671774-23671793 | Msa1282790:CDS | 45.0% | |
| !! | CAAAATGGGCTGAGCTTAAC+CGG | - | chr8_3:23671975-23671994 | Msa1282790:CDS | 45.0% |
| !! | TAGAGATGTTGATAGTGGGC+CGG | + | chr8_3:23672133-23672152 | None:intergenic | 45.0% |
| GTAGCGGTAGAGTTTCTTCT+AGG | - | chr8_3:23672226-23672245 | Msa1282790:intron | 45.0% | |
| TTGGACTGCAATGAGCTTCA+AGG | - | chr8_3:23672782-23672801 | Msa1282790:intron | 45.0% | |
| AACCAAACCGTTGCTTCGAA+CGG | + | chr8_3:23672988-23673007 | None:intergenic | 45.0% | |
| CAGAAGTGGAAGCCATTACA+GGG | - | chr8_3:23673248-23673267 | Msa1282790:intron | 45.0% | |
| CTAACCTTCCTTCCCTGTAA+TGG | + | chr8_3:23673263-23673282 | None:intergenic | 45.0% | |
| CAATGATGTGACTTGACAGG+AGG | - | chr8_3:23673464-23673483 | Msa1282790:intron | 45.0% | |
| !!! | CAGTTTGGCATGGTTTTGGA+CGG | + | chr8_3:23673647-23673666 | None:intergenic | 45.0% |
| CTGGAAAGTTCAGTTTGGCA+TGG | + | chr8_3:23673657-23673676 | None:intergenic | 45.0% | |
| TAAAAAGGATTGGGCGGGTA+CGG | + | chr8_3:23673702-23673721 | None:intergenic | 45.0% | |
| ! | GCAACGGATTTATCGGGTTT+CGG | - | chr8_3:23673726-23673745 | Msa1282790:intron | 45.0% |
| ATAGGGGTGAGCAGATATAC+CGG | + | chr8_3:23673758-23673777 | None:intergenic | 45.0% | |
| !! | GATTGGTAATGAGGAAGGCA+TGG | - | chr8_3:23673791-23673810 | Msa1282790:intron | 45.0% |
| ! | AATGAGGAAGGCATGGATCT+CGG | - | chr8_3:23673798-23673817 | Msa1282790:intron | 45.0% |
| GTTGCGGCCTGTAAAATAGT+TGG | + | chr8_3:23673883-23673902 | None:intergenic | 45.0% | |
| ACGTTACATGACCTGTACTG+TGG | - | chr8_3:23674131-23674150 | Msa1282790:intron | 45.0% | |
| GTGTCCATTAGATGCATGTG+AGG | - | chr8_3:23674191-23674210 | Msa1282790:intron | 45.0% | |
| CACACCTCACATGCATCTAA+TGG | + | chr8_3:23674198-23674217 | None:intergenic | 45.0% | |
| CATTAGATGCATGTGAGGTG+TGG | - | chr8_3:23674196-23674215 | Msa1282790:intron | 45.0% | |
| CTGACAACACCAGTCAATGA+GGG | + | chr8_3:23674549-23674568 | None:intergenic | 45.0% | |
| TCTGACAACACCAGTCAATG+AGG | + | chr8_3:23674550-23674569 | None:intergenic | 45.0% | |
| ! | TGATGAAGAGTGCACTAGCA+GGG | - | chr8_3:23674595-23674614 | Msa1282790:intron | 45.0% |
| !! | ATGGCGACTGAGCTTGTTAT+AGG | - | chr8_3:23674971-23674990 | Msa1282790:intron | 45.0% |
| TGATCTGCAAGGGCAAAGAA+AGG | - | chr8_3:23675204-23675223 | Msa1282790:intron | 45.0% | |
| TGTTGTGTGGTCCATTCCAA+TGG | - | chr8_3:23675249-23675268 | Msa1282790:intron | 45.0% | |
| ! | GAGGCACTTATCCATTGGAA+TGG | + | chr8_3:23675263-23675282 | None:intergenic | 45.0% |
| TAAGTGCCTCATTGAAGCCT+TGG | - | chr8_3:23675273-23675292 | Msa1282790:intron | 45.0% | |
| GAACAACCAAGGCTTCAATG+AGG | + | chr8_3:23675282-23675301 | None:intergenic | 45.0% | |
| CACTCAATCATCTCCGTATC+TGG | + | chr8_3:23675493-23675512 | None:intergenic | 45.0% | |
| TAGGCACATCCAGATGCAAA+AGG | - | chr8_3:23675629-23675648 | Msa1282790:intron | 45.0% | |
| TTCATCTTTGCCCAACGTCT+TGG | + | chr8_3:23675719-23675738 | None:intergenic | 45.0% | |
| AAGACGTTGGGCAAAGATGA+AGG | - | chr8_3:23675718-23675737 | Msa1282790:intron | 45.0% | |
| !! | GAAGGATGGTAATGGTCTAG+TGG | - | chr8_3:23675736-23675755 | Msa1282790:intron | 45.0% |
| GGTGGACATGAAAAATTGCG+AGG | - | chr8_3:23675757-23675776 | Msa1282790:intron | 45.0% | |
| GGACATGAAAAATTGCGAGG+AGG | - | chr8_3:23675760-23675779 | Msa1282790:intron | 45.0% | |
| TGAACTAGGAGATGCAAAGG+AGG | + | chr8_3:23675792-23675811 | None:intergenic | 45.0% | |
| TGTCTTATAGGTACCACTGG+AGG | + | chr8_3:23675896-23675915 | None:intergenic | 45.0% | |
| TGATACCTCTGAGCTGTTAC+AGG | - | chr8_3:23676024-23676043 | Msa1282790:intron | 45.0% | |
| ! | AGGCTGTGATGGAGATAGAT+GGG | - | chr8_3:23676044-23676063 | Msa1282790:intron | 45.0% |
| ! | TGTGATGGAGATAGATGGGT+TGG | - | chr8_3:23676048-23676067 | Msa1282790:intron | 45.0% |
| !! | AGAAGGCTCTGGCTTTGATA+GGG | + | chr8_3:23676117-23676136 | None:intergenic | 45.0% |
| !! | AAGAAGGCTCTGGCTTTGAT+AGG | + | chr8_3:23676118-23676137 | None:intergenic | 45.0% |
| !! | TTTTCAGACAGTTCTGGTGG+TGG | - | chr8_3:23676170-23676189 | Msa1282790:intron | 45.0% |
| !!! | ATTTTGGGACCACGGTTGAA+CGG | - | chr8_3:23676238-23676257 | Msa1282790:intron | 45.0% |
| GTAATCTGCAAGGTCGAAAG+AGG | + | chr8_3:23676458-23676477 | None:intergenic | 45.0% | |
| !!! | AGGGGTTTTTTGCCTGCTTA+TGG | - | chr8_3:23676536-23676555 | Msa1282790:five_prime_UTR | 45.0% |
| !! | TAGTTAAATTTAATAAATAA+GGG | - | chr8_3:23671802-23671821 | Msa1282790:CDS | 5.0% |
| CTGTCTGTGCATAGTTGCTG+AGG | - | chr8_3:23671590-23671609 | Msa1282790:CDS | 50.0% | |
| CTCCTCCGTGCTAATTTGAG+TGG | + | chr8_3:23671695-23671714 | None:intergenic | 50.0% | |
| !! | GTGGTATTGACTTGGGACCT+GGG | + | chr8_3:23671759-23671778 | None:intergenic | 50.0% |
| !! | AGTGGTATTGACTTGGGACC+TGG | + | chr8_3:23671760-23671779 | None:intergenic | 50.0% |
| ! | ACCCACTTAGGTTAGCTCAG+TGG | + | chr8_3:23671778-23671797 | None:intergenic | 50.0% |
| !! | ATTGTGTTGGGCTAGCTCGT+TGG | - | chr8_3:23672099-23672118 | Msa1282790:CDS | 50.0% |
| !! | TTGTGTTGGGCTAGCTCGTT+GGG | - | chr8_3:23672100-23672119 | Msa1282790:CDS | 50.0% |
| CCATGCTCAAGCTTACACAC+AGG | + | chr8_3:23672405-23672424 | None:intergenic | 50.0% | |
| CCTGTGTGTAAGCTTGAGCA+TGG | - | chr8_3:23672402-23672421 | Msa1282790:CDS | 50.0% | |
| !! | AATTAGGGGTGAGCATCGGT+CGG | - | chr8_3:23672889-23672908 | Msa1282790:intron | 50.0% |
| !! | TGGGTTTTGTGAACCGAACC+CGG | + | chr8_3:23672921-23672940 | None:intergenic | 50.0% |
| TGCTTCGAACGGATGGAAGT+GGG | + | chr8_3:23672977-23672996 | None:intergenic | 50.0% | |
| TTGCTTCGAACGGATGGAAG+TGG | + | chr8_3:23672978-23672997 | None:intergenic | 50.0% | |
| CTTCCATCCGTTCGAAGCAA+CGG | - | chr8_3:23672978-23672997 | Msa1282790:intron | 50.0% | |
| AAACCGTTGCTTCGAACGGA+TGG | + | chr8_3:23672984-23673003 | None:intergenic | 50.0% | |
| ATCCGTTCGAAGCAACGGTT+TGG | - | chr8_3:23672983-23673002 | Msa1282790:intron | 50.0% | |
| !! | GTTCGAAGCAACGGTTTGGT+TGG | - | chr8_3:23672987-23673006 | Msa1282790:intron | 50.0% |
| !! | GCAACGGTTTGGTTGGTTTG+CGG | - | chr8_3:23672994-23673013 | Msa1282790:intron | 50.0% |
| !! | GGTTGGTTTGCGGTTGGAAT+CGG | - | chr8_3:23673004-23673023 | Msa1282790:intron | 50.0% |
| TTTGCGGTTGGAATCGGTTG+CGG | - | chr8_3:23673010-23673029 | Msa1282790:intron | 50.0% | |
| GCAGAAGTGGAAGCCATTAC+AGG | - | chr8_3:23673247-23673266 | Msa1282790:intron | 50.0% | |
| AGTGGAAGCCATTACAGGGA+AGG | - | chr8_3:23673252-23673271 | Msa1282790:intron | 50.0% | |
| GAAGCCATTACAGGGAAGGA+AGG | - | chr8_3:23673256-23673275 | Msa1282790:intron | 50.0% | |
| TAGCTAGTGAGAGAGACGCA+AGG | - | chr8_3:23673280-23673299 | Msa1282790:intron | 50.0% | |
| ! | GGTCTACGGGTTGACAAAAC+TGG | + | chr8_3:23673676-23673695 | None:intergenic | 50.0% |
| AAAAAGGATTGGGCGGGTAC+GGG | + | chr8_3:23673701-23673720 | None:intergenic | 50.0% | |
| CGGATTTATCGGGTTTCGGT+CGG | - | chr8_3:23673730-23673749 | Msa1282790:intron | 50.0% | |
| CCTCAATGCAGTCATGGTTG+CGG | + | chr8_3:23673899-23673918 | None:intergenic | 50.0% | |
| AACCATGACTGCATTGAGGC+CGG | - | chr8_3:23673900-23673919 | Msa1282790:intron | 50.0% | |
| AAGTGACACAGCCACAGTAC+AGG | + | chr8_3:23674145-23674164 | None:intergenic | 50.0% | |
| !! | GTACTGTGGCTGTGTCACTT+TGG | - | chr8_3:23674145-23674164 | Msa1282790:intron | 50.0% |
| ! | CTGATGAAGAGTGCACTAGC+AGG | - | chr8_3:23674594-23674613 | Msa1282790:intron | 50.0% |
| ACAAGCTCAGTCGCCATGAT+AGG | + | chr8_3:23674968-23674987 | None:intergenic | 50.0% | |
| CTGTGTGACTAGGATGCCAT+AGG | + | chr8_3:23675047-23675066 | None:intergenic | 50.0% | |
| CTGGGCGCAACAGTTAAAGT+TGG | + | chr8_3:23675072-23675091 | None:intergenic | 50.0% | |
| CAACTTTAACTGTTGCGCCC+AGG | - | chr8_3:23675070-23675089 | Msa1282790:intron | 50.0% | |
| !! | ATGGAGCACTGTGATCTGCA+AGG | - | chr8_3:23675193-23675212 | Msa1282790:intron | 50.0% |
| !! | TGGAGCACTGTGATCTGCAA+GGG | - | chr8_3:23675194-23675213 | Msa1282790:intron | 50.0% |
| GACTGAAGACGCTGAAGAAG+AGG | - | chr8_3:23675419-23675438 | Msa1282790:intron | 50.0% | |
| TCAGTCAGGATGGTTTCGAG+TGG | - | chr8_3:23675464-23675483 | Msa1282790:intron | 50.0% | |
| AGTGTGATCACGACGAGCTT+TGG | - | chr8_3:23675509-23675528 | Msa1282790:intron | 50.0% | |
| ! | CCACGGAATCCTTTTGCATC+TGG | + | chr8_3:23675641-23675660 | None:intergenic | 50.0% |
| CCAGATGCAAAAGGATTCCG+TGG | - | chr8_3:23675638-23675657 | Msa1282790:intron | 50.0% | |
| CGTTGGGCAAAGATGAAGGA+TGG | - | chr8_3:23675722-23675741 | Msa1282790:intron | 50.0% | |
| !! | GGATGGTAATGGTCTAGTGG+TGG | - | chr8_3:23675739-23675758 | Msa1282790:intron | 50.0% |
| TACAATGGGCCTCCTGAGTA+TGG | - | chr8_3:23675845-23675864 | Msa1282790:intron | 50.0% | |
| ! | TCTGGAATCTGGCCATACTC+AGG | + | chr8_3:23675860-23675879 | None:intergenic | 50.0% |
| GAGTATGGCCAGATTCCAGA+TGG | - | chr8_3:23675860-23675879 | Msa1282790:intron | 50.0% | |
| GGAGGCTCATTATAGCCATC+TGG | + | chr8_3:23675878-23675897 | None:intergenic | 50.0% | |
| TGGCTATAATGAGCCTCCAG+TGG | - | chr8_3:23675880-23675899 | Msa1282790:intron | 50.0% | |
| TCTGAGCTACGAGACCGTTT+AGG | + | chr8_3:23675923-23675942 | None:intergenic | 50.0% | |
| ! | GCACGATGCATTGATGACAG+TGG | - | chr8_3:23675949-23675968 | Msa1282790:intron | 50.0% |
| CGATCGAATCAGCCAATCGT+CGG | + | chr8_3:23675985-23676004 | None:intergenic | 50.0% | |
| TGAGCTGTTACAGGCTGTGA+TGG | - | chr8_3:23676033-23676052 | Msa1282790:intron | 50.0% | |
| ! | CAGGCTGTGATGGAGATAGA+TGG | - | chr8_3:23676043-23676062 | Msa1282790:intron | 50.0% |
| !!! | TTTTGGGACCACGGTTGAAC+GGG | - | chr8_3:23676239-23676258 | Msa1282790:intron | 50.0% |
| AGCTCCCAACATCCATAAGC+AGG | + | chr8_3:23676551-23676570 | None:intergenic | 50.0% | |
| !! | TGGGAGCTTTGTTGCTGTGA+AGG | - | chr8_3:23676563-23676582 | Msa1282790:five_prime_UTR | 50.0% |
| GGAGTGAAGGAAGACGGTTC+TGG | + | chr8_3:23671189-23671208 | None:intergenic | 55.0% | |
| GCCCACTCAAATTAGCACGG+AGG | - | chr8_3:23671690-23671709 | Msa1282790:CDS | 55.0% | |
| ! | ATGGGCTGAGCTTAACCGGA+CGG | - | chr8_3:23671979-23671998 | Msa1282790:CDS | 55.0% |
| ! | TTATGGGCTAATGGGCCGTC+CGG | + | chr8_3:23671997-23672016 | None:intergenic | 55.0% |
| TAGCTCGTTGGGCTTTCGAC+CGG | - | chr8_3:23672111-23672130 | Msa1282790:CDS | 55.0% | |
| !! | ATTAGGGGTGAGCATCGGTC+GGG | - | chr8_3:23672890-23672909 | Msa1282790:intron | 55.0% |
| !! | CGGTTTGGTTGGTTTGCGGT+TGG | - | chr8_3:23672998-23673017 | Msa1282790:intron | 55.0% |
| TTGCGGTTGGAATCGGTTGC+GGG | - | chr8_3:23673011-23673030 | Msa1282790:intron | 55.0% | |
| !! | GGAATCGGTTGCGGGTTAGA+CGG | - | chr8_3:23673019-23673038 | Msa1282790:intron | 55.0% |
| !!! | TGGTTTTGGACGGTCGAGGT+CGG | + | chr8_3:23673637-23673656 | None:intergenic | 55.0% |
| ! | TATCGGGTTTCGGTCGGTTC+CGG | - | chr8_3:23673736-23673755 | Msa1282790:intron | 55.0% |
| CCGCAACCATGACTGCATTG+AGG | - | chr8_3:23673896-23673915 | Msa1282790:intron | 55.0% | |
| TACCGGCCTCAATGCAGTCA+TGG | + | chr8_3:23673905-23673924 | None:intergenic | 55.0% | |
| !! | GTGGCTGTGTCACTTTGGCT+TGG | - | chr8_3:23674150-23674169 | Msa1282790:intron | 55.0% |
| GTCCTGGAACCCTCATTGAC+TGG | - | chr8_3:23674537-23674556 | Msa1282790:intron | 55.0% | |
| CACCAGTCAATGAGGGTTCC+AGG | + | chr8_3:23674542-23674561 | None:intergenic | 55.0% | |
| GGAATCTGGCCATACTCAGG+AGG | + | chr8_3:23675857-23675876 | None:intergenic | 55.0% | |
| GGCATCAAGCATCCGACGAT+TGG | - | chr8_3:23675970-23675989 | Msa1282790:intron | 55.0% | |
| CACAGCCTGTAACAGCTCAG+AGG | + | chr8_3:23676032-23676051 | None:intergenic | 55.0% | |
| !! | GGCTCTGGCTTTGATAGGGT+CGG | + | chr8_3:23676113-23676132 | None:intergenic | 55.0% |
| TGAGAACACCCGTTCAACCG+TGG | + | chr8_3:23676250-23676269 | None:intergenic | 55.0% | |
| CAGCGGCGTCAATGGAGTGA+AGG | + | chr8_3:23671202-23671221 | None:intergenic | 60.0% | |
| AGACGCATCAGCGGCGTCAA+TGG | + | chr8_3:23671210-23671229 | None:intergenic | 60.0% | |
| GAGACCTTGAGGAGGAGCTC+AGG | - | chr8_3:23671725-23671744 | Msa1282790:CDS | 60.0% | |
| TGCTCCTGAGCTCCTCCTCA+AGG | + | chr8_3:23671732-23671751 | None:intergenic | 60.0% | |
| !! | CGGTTGCGGGTTAGACGGTT+CGG | - | chr8_3:23673024-23673043 | Msa1282790:intron | 60.0% |
| !!! | GGCATGGTTTTGGACGGTCG+AGG | + | chr8_3:23673641-23673660 | None:intergenic | 60.0% |
| ! | GAGCTCAGGAGCACACTCCC+AGG | - | chr8_3:23671739-23671758 | Msa1282790:CDS | 65.0% |
| !! | GGGTGAGCATCGGTCGGGTT+CGG | - | chr8_3:23672895-23672914 | Msa1282790:intron | 65.0% |
| AGGATTGGGCGGGTACGGGT+CGG | + | chr8_3:23673697-23673716 | None:intergenic | 65.0% | |
| !! | GAGCATCGGTCGGGTTCGGC+CGG | - | chr8_3:23672899-23672918 | Msa1282790:intron | 70.0% |
| !! | AGCATCGGTCGGGTTCGGCC+GGG | - | chr8_3:23672900-23672919 | Msa1282790:intron | 70.0% |
| GCGGGTACGGGTCGGTCTAC+GGG | + | chr8_3:23673689-23673708 | None:intergenic | 70.0% | |
| GGCGGGTACGGGTCGGTCTA+CGG | + | chr8_3:23673690-23673709 | None:intergenic | 70.0% | |
| CGGTCGGGTTCGGCCGGGTT+CGG | - | chr8_3:23672905-23672924 | Msa1282790:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 23671158 | 23676623 | 23671158 | ID=Msa1282790;Name=Msa1282790 |
| chr8_3 | mRNA | 23671158 | 23676623 | 23671158 | ID=Msa1282790-mRNA-1;Parent=Msa1282790;Name=Msa1282790-mRNA-1;_AED=0.03;_eAED=0.03;_QI=100|1|1|1|0.5|0.33|3|425|306 |
| chr8_3 | exon | 23671158 | 23672149 | 23671158 | ID=Msa1282790-mRNA-1:exon:8403;Parent=Msa1282790-mRNA-1 |
| chr8_3 | exon | 23672235 | 23672590 | 23672235 | ID=Msa1282790-mRNA-1:exon:8402;Parent=Msa1282790-mRNA-1 |
| chr8_3 | exon | 23676526 | 23676623 | 23676526 | ID=Msa1282790-mRNA-1:exon:8401;Parent=Msa1282790-mRNA-1 |
| chr8_3 | five_prime_UTR | 23676526 | 23676623 | 23676526 | ID=Msa1282790-mRNA-1:five_prime_utr;Parent=Msa1282790-mRNA-1 |
| chr8_3 | five_prime_UTR | 23672589 | 23672590 | 23672589 | ID=Msa1282790-mRNA-1:five_prime_utr;Parent=Msa1282790-mRNA-1 |
| chr8_3 | CDS | 23672235 | 23672588 | 23672235 | ID=Msa1282790-mRNA-1:cds;Parent=Msa1282790-mRNA-1 |
| chr8_3 | CDS | 23671583 | 23672149 | 23671583 | ID=Msa1282790-mRNA-1:cds;Parent=Msa1282790-mRNA-1 |
| chr8_3 | three_prime_UTR | 23671158 | 23671582 | 23671158 | ID=Msa1282790-mRNA-1:three_prime_utr;Parent=Msa1282790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
