Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241580 | XP_003628027.2 | 94.771 | 306 | 16 | 0 | 1 | 306 | 1 | 306 | 0.0 | 615 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241580 | G7LIE6 | 94.771 | 306 | 16 | 0 | 1 | 306 | 1 | 306 | 0.0 | 615 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1241580 | Msa1282790 | 0.837446 | 5.171926e-57 | -8.615850e-47 |
| Msa0602390 | Msa1241580 | 0.817490 | 3.210404e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241580 | MtrunA17_Chr8g0354231 | 94.771 | 306 | 16 | 0 | 1 | 306 | 1 | 306 | 0.0 | 615 |
| Msa1241580 | MtrunA17_Chr3g0093841 | 30.645 | 310 | 184 | 5 | 16 | 300 | 512 | 815 | 3.19e-38 | 143 |
| Msa1241580 | MtrunA17_Chr3g0093841 | 36.957 | 138 | 84 | 2 | 12 | 147 | 342 | 478 | 5.03e-22 | 96.3 |
| Msa1241580 | MtrunA17_Chr3g0093841 | 37.778 | 135 | 83 | 1 | 15 | 149 | 20 | 153 | 2.45e-21 | 94.4 |
| Msa1241580 | MtrunA17_Chr3g0093841 | 36.090 | 133 | 84 | 1 | 15 | 147 | 185 | 316 | 8.12e-21 | 92.8 |
| Msa1241580 | MtrunA17_Chr7g0264841 | 33.071 | 127 | 85 | 0 | 21 | 147 | 38 | 164 | 3.93e-18 | 83.2 |
| Msa1241580 | MtrunA17_Chr3g0087491 | 27.333 | 300 | 172 | 10 | 26 | 299 | 1 | 280 | 1.90e-15 | 75.1 |
| Msa1241580 | MtrunA17_Chr1g0176881 | 28.916 | 166 | 105 | 2 | 22 | 187 | 25 | 177 | 5.35e-15 | 75.5 |
| Msa1241580 | MtrunA17_Chr1g0176881 | 24.590 | 122 | 91 | 1 | 20 | 141 | 194 | 314 | 2.60e-11 | 64.3 |
| Msa1241580 | MtrunA17_Chr5g0405761 | 21.352 | 281 | 202 | 6 | 22 | 298 | 53 | 318 | 3.20e-11 | 63.2 |
| Msa1241580 | MtrunA17_Chr7g0238661 | 34.783 | 92 | 60 | 0 | 26 | 117 | 1 | 92 | 6.30e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241580 | AT4G02550.1 | 63.192 | 307 | 112 | 1 | 1 | 306 | 1 | 307 | 2.49e-139 | 396 |
| Msa1241580 | AT4G02550.5 | 63.192 | 307 | 112 | 1 | 1 | 306 | 1 | 307 | 2.49e-139 | 396 |
| Msa1241580 | AT4G02550.3 | 63.192 | 307 | 112 | 1 | 1 | 306 | 16 | 322 | 7.58e-139 | 395 |
| Msa1241580 | AT4G02550.2 | 60.458 | 306 | 93 | 1 | 1 | 306 | 1 | 278 | 1.36e-130 | 373 |
| Msa1241580 | AT4G02550.4 | 60.458 | 306 | 93 | 1 | 1 | 306 | 1 | 278 | 1.36e-130 | 373 |
| Msa1241580 | AT4G02210.1 | 28.223 | 287 | 166 | 11 | 20 | 302 | 184 | 434 | 4.11e-24 | 102 |
| Msa1241580 | AT4G02210.1 | 31.496 | 127 | 85 | 2 | 15 | 140 | 7 | 132 | 1.42e-14 | 74.3 |
| Msa1241580 | AT4G02210.2 | 28.223 | 287 | 166 | 11 | 20 | 302 | 184 | 434 | 4.11e-24 | 102 |
| Msa1241580 | AT4G02210.2 | 31.496 | 127 | 85 | 2 | 15 | 140 | 7 | 132 | 1.42e-14 | 74.3 |
| Msa1241580 | AT2G24960.2 | 35.821 | 134 | 85 | 1 | 20 | 153 | 325 | 457 | 1.07e-20 | 92.8 |
| Msa1241580 | AT2G24960.2 | 33.051 | 118 | 78 | 1 | 20 | 137 | 509 | 625 | 1.15e-14 | 75.1 |
| Msa1241580 | AT2G24960.2 | 31.092 | 119 | 81 | 1 | 22 | 140 | 172 | 289 | 6.09e-13 | 69.7 |
| Msa1241580 | AT2G24960.1 | 30.573 | 157 | 85 | 2 | 20 | 153 | 325 | 480 | 3.48e-16 | 79.3 |
| Msa1241580 | AT2G24960.1 | 33.051 | 118 | 78 | 1 | 20 | 137 | 532 | 648 | 1.42e-14 | 74.7 |
| Msa1241580 | AT2G24960.1 | 31.092 | 119 | 81 | 1 | 22 | 140 | 172 | 289 | 7.59e-13 | 69.3 |
Find 80 sgRNAs with CRISPR-Local
Find 368 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTTGACTTACAATTCT+AGG | 0.200157 | 8_2:-25265593 | Msa1241580:CDS |
| CACTCAATCATCTCCGTATC+TGG | 0.252146 | 8_2:+25266234 | None:intergenic |
| CGTTTAGGAAGTTGTCTTAT+AGG | 0.277741 | 8_2:+25265819 | None:intergenic |
| TTCGTGTATAGAATTTATTT+TGG | 0.308859 | 8_2:-25265502 | Msa1241580:three_prime_UTR |
| TGATACCTCTGAGCTGTTAC+AGG | 0.345222 | 8_2:-25265700 | Msa1241580:CDS |
| CTTACAAAGAGTTATGAAAT+AGG | 0.352209 | 8_2:+25265233 | None:intergenic |
| AAGAAGGCTCTGGCTTTGAT+AGG | 0.359625 | 8_2:+25265609 | None:intergenic |
| CATTATAGCCATCTGGAATC+TGG | 0.360946 | 8_2:+25265856 | None:intergenic |
| TACAATGGGCCTCCTGAGTA+TGG | 0.365504 | 8_2:-25265879 | Msa1241580:CDS |
| ACAATCTAATTCTCGTAATC+TGG | 0.369353 | 8_2:-25270504 | Msa1241580:intron |
| AGTGTGATCACGACGAGCTT+TGG | 0.375793 | 8_2:-25266215 | Msa1241580:CDS |
| CTATTTCATAACTCTTTGTA+AGG | 0.396981 | 8_2:-25265232 | Msa1241580:three_prime_UTR |
| TTCATCTTTGCCCAACGTCT+TGG | 0.403612 | 8_2:+25266008 | None:intergenic |
| GACGGTTCTGGAAAGTTAGA+TGG | 0.417310 | 8_2:+25270564 | None:intergenic |
| TTTGCCTGCTTATGGATGTT+GGG | 0.419217 | 8_2:-25265180 | Msa1241580:three_prime_UTR |
| GGAAAGTTAGATGGATAGAA+AGG | 0.420406 | 8_2:+25270573 | None:intergenic |
| AACTGAAATCATGTATCTGT+TGG | 0.426181 | 8_2:-25265125 | Msa1241580:three_prime_UTR |
| CAGGCTGTGATGGAGATAGA+TGG | 0.427601 | 8_2:-25265681 | Msa1241580:CDS |
| TGTATATAGATTCCAAAGAT+AGG | 0.432140 | 8_2:-25265416 | Msa1241580:three_prime_UTR |
| GGAGTGAAGGAAGACGGTTC+TGG | 0.435711 | 8_2:+25270552 | None:intergenic |
| TCTGAGCTACGAGACCGTTT+AGG | 0.440074 | 8_2:+25265804 | None:intergenic |
| AGACGCATCAGCGGCGTCAA+TGG | 0.442785 | 8_2:+25270531 | None:intergenic |
| CTATAAGACAACTTCCTAAA+CGG | 0.443768 | 8_2:-25265818 | Msa1241580:CDS |
| AATTAAAGATATTCTAAGTC+AGG | 0.446673 | 8_2:-25266274 | Msa1241580:CDS |
| GGAGGCTCATTATAGCCATC+TGG | 0.481405 | 8_2:+25265849 | None:intergenic |
| ACTGAAATCATGTATCTGTT+GGG | 0.489062 | 8_2:-25265124 | Msa1241580:three_prime_UTR |
| GGCATCAAGCATCCGACGAT+TGG | 0.491409 | 8_2:-25265754 | Msa1241580:CDS |
| TGGGAGCTTTGTTGCTGTGA+AGG | 0.496292 | 8_2:-25265161 | Msa1241580:three_prime_UTR |
| CCTAGAATTGTAAGTCAAGA+AGG | 0.504667 | 8_2:+25265593 | None:intergenic |
| TTATCAAGCTCCAAGACGTT+GGG | 0.506244 | 8_2:-25266018 | Msa1241580:CDS |
| TCAATGAGGCACTTATCCAT+TGG | 0.510566 | 8_2:+25266459 | None:intergenic |
| GAAAGTTAGATGGATAGAAA+GGG | 0.522156 | 8_2:+25270574 | None:intergenic |
| TAAGTGCCTCATTGAAGCCT+TGG | 0.530078 | 8_2:-25266451 | Msa1241580:CDS |
| AGCTCCCAACATCCATAAGC+AGG | 0.531782 | 8_2:+25265176 | None:intergenic |
| ATTGTAAGTCAAGAAGGCTC+TGG | 0.533058 | 8_2:+25265599 | None:intergenic |
| AAGACGTTGGGCAAAGATGA+AGG | 0.537087 | 8_2:-25266006 | Msa1241580:CDS |
| AGTTGTCTTATAGGTACCAC+TGG | 0.541732 | 8_2:+25265828 | None:intergenic |
| GACTGAAGACGCTGAAGAAG+AGG | 0.554159 | 8_2:-25266305 | Msa1241580:CDS |
| TCTGGAATCTGGCCATACTC+AGG | 0.556452 | 8_2:+25265867 | None:intergenic |
| AAAGATATTCTAAGTCAGGA+TGG | 0.559523 | 8_2:-25266270 | Msa1241580:CDS |
| AGAAGGCTCTGGCTTTGATA+GGG | 0.562143 | 8_2:+25265610 | None:intergenic |
| TGAGCTGTTACAGGCTGTGA+TGG | 0.562656 | 8_2:-25265691 | Msa1241580:CDS |
| TGATCTGCAAGGGCAAAGAA+AGG | 0.563961 | 8_2:-25266520 | Msa1241580:CDS |
| GTAATCTGCAAGGTCGAAAG+AGG | 0.567020 | 8_2:+25265269 | None:intergenic |
| TAGGCACATCGAGATGCAAA+AGG | 0.569154 | 8_2:-25266095 | Msa1241580:CDS |
| GAGGCACTTATCCATTGGAA+TGG | 0.574506 | 8_2:+25266464 | None:intergenic |
| ATGGAACTGAGTCATACAAT+GGG | 0.577052 | 8_2:-25265893 | Msa1241580:CDS |
| CGATCGAATCAGCCAATCGT+CGG | 0.579219 | 8_2:+25265742 | None:intergenic |
| ATTATCAAGCTCCAAGACGT+TGG | 0.583817 | 8_2:-25266019 | Msa1241580:CDS |
| CGAGATGCAAAAGGATTCCG+TGG | 0.585388 | 8_2:-25266086 | Msa1241580:CDS |
| TGTGATGGAGATAGATGGGT+TGG | 0.587510 | 8_2:-25265676 | Msa1241580:CDS |
| GGCTCTGGCTTTGATAGGGT+CGG | 0.592268 | 8_2:+25265614 | None:intergenic |
| GAACAACTTAAAATTGTCTG+TGG | 0.595274 | 8_2:-25266044 | Msa1241580:CDS |
| ACGAAAACGCACAATACACT+TGG | 0.595581 | 8_2:+25265520 | None:intergenic |
| TGTTGTGTGGTCCATTCCAA+TGG | 0.596105 | 8_2:-25266475 | Msa1241580:CDS |
| GCAAAGATGAAGGATGGTAA+TGG | 0.597717 | 8_2:-25265996 | Msa1241580:CDS |
| CAGCGGCGTCAATGGAGTGA+AGG | 0.599016 | 8_2:+25270539 | None:intergenic |
| ATGGAGCACTGTGATCTGCA+AGG | 0.609971 | 8_2:-25266531 | Msa1241580:CDS |
| TTTCGAGTGGAATCCAGATA+CGG | 0.611897 | 8_2:-25266247 | Msa1241580:CDS |
| CTTAATAATACAAAATACAA+AGG | 0.613491 | 8_2:+25265100 | None:intergenic |
| TGAACTAGGAGATGCAAAGG+AGG | 0.613941 | 8_2:+25265935 | None:intergenic |
| GTCAATGGAGTGAAGGAAGA+CGG | 0.622525 | 8_2:+25270546 | None:intergenic |
| TGGAGCACTGTGATCTGCAA+GGG | 0.624868 | 8_2:-25266530 | Msa1241580:CDS |
| AGGCTGTGATGGAGATAGAT+GGG | 0.626512 | 8_2:-25265680 | Msa1241580:CDS |
| ATTGTAGAGAGACGCATCAG+CGG | 0.634507 | 8_2:+25270522 | None:intergenic |
| GATGGAACTGAGTCATACAA+TGG | 0.636834 | 8_2:-25265894 | Msa1241580:CDS |
| GAGTATGGCCAGATTCCAGA+TGG | 0.636898 | 8_2:-25265864 | Msa1241580:CDS |
| CGTTGGGCAAAGATGAAGGA+TGG | 0.637907 | 8_2:-25266002 | Msa1241580:CDS |
| TAAGTCAGGATGGTTTCGAG+TGG | 0.638097 | 8_2:-25266260 | Msa1241580:CDS |
| TGGCTATAATGAGCCTCCAG+TGG | 0.650424 | 8_2:-25265844 | Msa1241580:CDS |
| GGAATCTGGCCATACTCAGG+AGG | 0.660169 | 8_2:+25265870 | None:intergenic |
| GAAGGATGGTAATGGTCTAG+TGG | 0.662589 | 8_2:-25265988 | Msa1241580:CDS |
| GGATGGTAATGGTCTAGTGG+TGG | 0.663597 | 8_2:-25265985 | Msa1241580:CDS |
| CACAGCCTGTAACAGCTCAG+AGG | 0.672716 | 8_2:+25265695 | None:intergenic |
| ATAAGGGAAGAAATGTTGTG+TGG | 0.689608 | 8_2:-25266488 | Msa1241580:CDS |
| TGAGAACACCCGTTCAACCG+TGG | 0.692187 | 8_2:+25265477 | None:intergenic |
| GAACAACCAAGGCTTCAATG+AGG | 0.697420 | 8_2:+25266445 | None:intergenic |
| AATGAGTCGAGTAATCTGCA+AGG | 0.703412 | 8_2:+25265259 | None:intergenic |
| TGTCTTATAGGTACCACTGG+AGG | 0.728385 | 8_2:+25265831 | None:intergenic |
| GCACGATGCATTGATGACAG+TGG | 0.754626 | 8_2:-25265775 | Msa1241580:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAGTTAAATTTAATAAATA+AGG | - | chr8_2:25265723-25265742 | Msa1241580:CDS | 10.0% |
| !! | AAATGAAAAATAATTAGAAT+AGG | - | chr8_2:25267412-25267431 | Msa1241580:intron | 10.0% |
| !! | TTAAAAAGAAAATAACAATA+AGG | - | chr8_2:25268860-25268879 | Msa1241580:intron | 10.0% |
| !! | CTATTATACTATTATTACAA+TGG | + | chr8_2:25265325-25265344 | None:intergenic | 15.0% |
| !!! | AATTTTTATATGGACTAAAT+GGG | + | chr8_2:25266004-25266023 | None:intergenic | 15.0% |
| !! | ATTTCATTTAAGAAGAAAAA+TGG | + | chr8_2:25268209-25268228 | None:intergenic | 15.0% |
| !!! | TTTAAAACTATCAATAAAAC+AGG | + | chr8_2:25268312-25268331 | None:intergenic | 15.0% |
| !!! | GATAGTTTTAAATATTTTAC+AGG | - | chr8_2:25268320-25268339 | Msa1241580:intron | 15.0% |
| !! | ATTATATTTCACCTAAAAAA+AGG | + | chr8_2:25268656-25268675 | None:intergenic | 15.0% |
| !! | AAGAAAGGATATAAAAAATA+AGG | - | chr8_2:25269157-25269176 | Msa1241580:intron | 15.0% |
| !! | AGAAAGGATATAAAAAATAA+GGG | - | chr8_2:25269158-25269177 | Msa1241580:intron | 15.0% |
| !! | CTTAATAATACAAAATACAA+AGG | + | chr8_2:25270565-25270584 | None:intergenic | 15.0% |
| !! | AATAAAACTGAAACAATTAG+TGG | + | chr8_2:25265201-25265220 | None:intergenic | 20.0% |
| !! | TATTATTAGAGCTATCAAAA+TGG | - | chr8_2:25265882-25265901 | Msa1241580:CDS | 20.0% |
| !! | ATTATTAGAGCTATCAAAAT+GGG | - | chr8_2:25265883-25265902 | Msa1241580:CDS | 20.0% |
| !!! | CAATTTTTATATGGACTAAA+TGG | + | chr8_2:25266005-25266024 | None:intergenic | 20.0% |
| !!! | TTTTTTGGAATCATTTTTCA+TGG | - | chr8_2:25266192-25266211 | Msa1241580:intron | 20.0% |
| !! | TACTTTGTATTTGAAAATCA+CGG | - | chr8_2:25266634-25266653 | Msa1241580:intron | 20.0% |
| !! | ACGAAAACATTATATATGAA+AGG | - | chr8_2:25267046-25267065 | Msa1241580:intron | 20.0% |
| !! | AATCATTATCATCGTAAATA+GGG | + | chr8_2:25267697-25267716 | None:intergenic | 20.0% |
| !!! | TGATATGTATATTTTTGGAA+TGG | - | chr8_2:25268144-25268163 | Msa1241580:intron | 20.0% |
| !! | CTAAAAGTTTGTAAATTTCA+TGG | - | chr8_2:25268825-25268844 | Msa1241580:intron | 20.0% |
| !! | AATTAAAGATATTCTAAGTC+AGG | - | chr8_2:25269388-25269407 | Msa1241580:intron | 20.0% |
| !!! | TTCGTGTATAGAATTTATTT+TGG | - | chr8_2:25270160-25270179 | Msa1241580:intron | 20.0% |
| !!! | TCGTGTATAGAATTTATTTT+GGG | - | chr8_2:25270161-25270180 | Msa1241580:intron | 20.0% |
| !!! | TTTAAATTTTTCAGCAAGTT+TGG | - | chr8_2:25270354-25270373 | Msa1241580:intron | 20.0% |
| !! | TACTGCATTAACTACATTTT+GGG | - | chr8_2:25265376-25265395 | Msa1241580:three_prime_UTR | 25.0% |
| !!! | TTAACTACATTTTGGGTTTT+AGG | - | chr8_2:25265383-25265402 | Msa1241580:three_prime_UTR | 25.0% |
| !! | ATTAACTCAGTTGATTTCAA+CGG | - | chr8_2:25265541-25265560 | Msa1241580:exon | 25.0% |
| !! | ATGAAAAATTATGGGCTAAT+GGG | + | chr8_2:25265927-25265946 | None:intergenic | 25.0% |
| !! | ATTAGCCCATAATTTTTCAT+GGG | - | chr8_2:25265927-25265946 | Msa1241580:CDS | 25.0% |
| !!! | TTTTTTGGCTTGCTTTTTTA+CGG | + | chr8_2:25265958-25265977 | None:intergenic | 25.0% |
| !!! | AAGAAAGCTCAATTGTTTTT+TGG | + | chr8_2:25265973-25265992 | None:intergenic | 25.0% |
| ! | AAAAAACAATTGAGCTTTCT+TGG | - | chr8_2:25265972-25265991 | Msa1241580:CDS | 25.0% |
| ! | AAAAACAATTGAGCTTTCTT+GGG | - | chr8_2:25265973-25265992 | Msa1241580:CDS | 25.0% |
| ! | AGTCCATATAAAAATTGTGT+TGG | - | chr8_2:25266008-25266027 | Msa1241580:CDS | 25.0% |
| ! | GTCCATATAAAAATTGTGTT+GGG | - | chr8_2:25266009-25266028 | Msa1241580:CDS | 25.0% |
| !! | TTAAGTAGTTATTTCAGACT+TGG | - | chr8_2:25266360-25266379 | Msa1241580:CDS | 25.0% |
| !! | ATAAATTTGAAGCATAGAAG+AGG | - | chr8_2:25266403-25266422 | Msa1241580:CDS | 25.0% |
| !! | TAAATTTGAAGCATAGAAGA+GGG | - | chr8_2:25266404-25266423 | Msa1241580:CDS | 25.0% |
| ! | GAAATCAAAGTGAAAAGTAA+AGG | + | chr8_2:25266474-25266493 | None:intergenic | 25.0% |
| ! | GATTTATAGTCTCAAATATG+CGG | - | chr8_2:25266543-25266562 | Msa1241580:intron | 25.0% |
| ! | ATGTAATGTGGTTGAAATAT+TGG | - | chr8_2:25266574-25266593 | Msa1241580:intron | 25.0% |
| !! | AAAGTATTTATCGTTTCATG+TGG | + | chr8_2:25266620-25266639 | None:intergenic | 25.0% |
| ! | ATAAAAAACCTATTTGAGTG+AGG | + | chr8_2:25266731-25266750 | None:intergenic | 25.0% |
| !!! | TAGAGGGAATTTTTAAAGTT+AGG | - | chr8_2:25266778-25266797 | Msa1241580:intron | 25.0% |
| !!! | AGAGGGAATTTTTAAAGTTA+GGG | - | chr8_2:25266779-25266798 | Msa1241580:intron | 25.0% |
| !!! | TTAGGGGTATTTTACAATTA+GGG | - | chr8_2:25266796-25266815 | Msa1241580:intron | 25.0% |
| ! | CTTCATACTCAATTCTTTAA+TGG | + | chr8_2:25266993-25267012 | None:intergenic | 25.0% |
| !! | GTTTTTCTTTAATGTAGAAG+TGG | - | chr8_2:25267156-25267175 | Msa1241580:intron | 25.0% |
| ! | TCTTGTATGTCTAGATTAAT+AGG | - | chr8_2:25267327-25267346 | Msa1241580:intron | 25.0% |
| ! | TACTTGCAATAACTATAAGT+CGG | - | chr8_2:25267498-25267517 | Msa1241580:intron | 25.0% |
| ! | GTTGCAAAATAAAAAGGATT+GGG | + | chr8_2:25267633-25267652 | None:intergenic | 25.0% |
| !!! | CAATCCTTTTTATTTTGCAA+CGG | - | chr8_2:25267632-25267651 | Msa1241580:intron | 25.0% |
| !!! | AATCCTTTTTATTTTGCAAC+GGG | - | chr8_2:25267633-25267652 | Msa1241580:intron | 25.0% |
| ! | ATCATTATCATCGTAAATAG+GGG | + | chr8_2:25267696-25267715 | None:intergenic | 25.0% |
| ! | CAATCATTATCATCGTAAAT+AGG | + | chr8_2:25267698-25267717 | None:intergenic | 25.0% |
| !! | CTATTTACGATGATAATGAT+TGG | - | chr8_2:25267696-25267715 | Msa1241580:intron | 25.0% |
| ! | TTAGATTCTGTAACAAGTTT+AGG | - | chr8_2:25267905-25267924 | Msa1241580:intron | 25.0% |
| ! | TAGATTCTGTAACAAGTTTA+GGG | - | chr8_2:25267906-25267925 | Msa1241580:intron | 25.0% |
| ! | CTCTAGTTAAAAGAAGAAAA+TGG | + | chr8_2:25268353-25268372 | None:intergenic | 25.0% |
| !!! | AACCTTAACTTCCTTTTTTT+AGG | - | chr8_2:25268642-25268661 | Msa1241580:intron | 25.0% |
| ! | AAATAAGAACACACAAAGTA+TGG | - | chr8_2:25268753-25268772 | Msa1241580:intron | 25.0% |
| ! | AATAAGAACACACAAAGTAT+GGG | - | chr8_2:25268754-25268773 | Msa1241580:intron | 25.0% |
| !!! | AACTTTTAGCTGAAGAAAAA+GGG | + | chr8_2:25268814-25268833 | None:intergenic | 25.0% |
| !!! | AAACTTTTAGCTGAAGAAAA+AGG | + | chr8_2:25268815-25268834 | None:intergenic | 25.0% |
| ! | AAAATAACAATAAGGAATGC+TGG | - | chr8_2:25268868-25268887 | Msa1241580:intron | 25.0% |
| ! | TCTTCATGTTTAAGTAAATG+AGG | - | chr8_2:25269035-25269054 | Msa1241580:intron | 25.0% |
| ! | CTTCATGTTTAAGTAAATGA+GGG | - | chr8_2:25269036-25269055 | Msa1241580:intron | 25.0% |
| ! | GAATCAAAGAACACTTAAAT+AGG | + | chr8_2:25269541-25269560 | None:intergenic | 25.0% |
| ! | TGTATATAGATTCCAAAGAT+AGG | - | chr8_2:25270246-25270265 | Msa1241580:intron | 25.0% |
| !! | GACTATTTTATACCTATCTT+TGG | + | chr8_2:25270261-25270280 | None:intergenic | 25.0% |
| ! | CTTACAAAGAGTTATGAAAT+AGG | + | chr8_2:25270432-25270451 | None:intergenic | 25.0% |
| ! | CTATTTCATAACTCTTTGTA+AGG | - | chr8_2:25270430-25270449 | Msa1241580:intron | 25.0% |
| !!! | ACTTGATCATTTTAGGATTT+AGG | - | chr8_2:25270454-25270473 | Msa1241580:intron | 25.0% |
| !!! | CTTGATCATTTTAGGATTTA+GGG | - | chr8_2:25270455-25270474 | Msa1241580:intron | 25.0% |
| !!! | TTGATCATTTTAGGATTTAG+GGG | - | chr8_2:25270456-25270475 | Msa1241580:intron | 25.0% |
| GAAAGTTAGATGGATAGAAA+GGG | + | chr8_2:25265091-25265110 | None:intergenic | 30.0% | |
| ACAATCTAATTCTCGTAATC+TGG | - | chr8_2:25265158-25265177 | Msa1241580:three_prime_UTR | 30.0% | |
| ! | CTACTGCATTAACTACATTT+TGG | - | chr8_2:25265375-25265394 | Msa1241580:three_prime_UTR | 30.0% |
| !! | GCATTGATATTCTAAAGTGA+CGG | - | chr8_2:25265775-25265794 | Msa1241580:CDS | 30.0% |
| ATGTGACAAGTATTATGAGA+TGG | - | chr8_2:25265825-25265844 | Msa1241580:CDS | 30.0% | |
| ! | CATGAAAAATTATGGGCTAA+TGG | + | chr8_2:25265928-25265947 | None:intergenic | 30.0% |
| ! | CATTAGCCCATAATTTTTCA+TGG | - | chr8_2:25265926-25265945 | Msa1241580:CDS | 30.0% |
| ! | TTATATGGACTAAATGGGTT+GGG | + | chr8_2:25265999-25266018 | None:intergenic | 30.0% |
| ! | TTTATATGGACTAAATGGGT+TGG | + | chr8_2:25266000-25266019 | None:intergenic | 30.0% |
| ! | AGCCCAACACAATTTTTATA+TGG | + | chr8_2:25266014-25266033 | None:intergenic | 30.0% |
| GATATCAGAGTGAACATTAT+TGG | - | chr8_2:25266124-25266143 | Msa1241580:intron | 30.0% | |
| CTATAGTAACATCAAAGTCT+TGG | - | chr8_2:25266438-25266457 | Msa1241580:CDS | 30.0% | |
| AACAGAGAATAAGCACAATT+AGG | - | chr8_2:25266515-25266534 | Msa1241580:CDS | 30.0% | |
| ACAGAGAATAAGCACAATTA+GGG | - | chr8_2:25266516-25266535 | Msa1241580:CDS | 30.0% | |
| TAATGTGGTTGAAATATTGG+TGG | - | chr8_2:25266577-25266596 | Msa1241580:intron | 30.0% | |
| ! | TGTGTTGTGTTATTACATTG+AGG | + | chr8_2:25266666-25266685 | None:intergenic | 30.0% |
| CATCTGCTAAATAAAGAAAG+AGG | + | chr8_2:25266758-25266777 | None:intergenic | 30.0% | |
| ! | TCTTTATTTAGCAGATGTAG+AGG | - | chr8_2:25266761-25266780 | Msa1241580:intron | 30.0% |
| ! | CTTTATTTAGCAGATGTAGA+GGG | - | chr8_2:25266762-25266781 | Msa1241580:intron | 30.0% |
| !!! | GAGGGAATTTTTAAAGTTAG+GGG | - | chr8_2:25266780-25266799 | Msa1241580:intron | 30.0% |
| !!! | GTTAGGGGTATTTTACAATT+AGG | - | chr8_2:25266795-25266814 | Msa1241580:intron | 30.0% |
| !!! | TAGGGGTATTTTACAATTAG+GGG | - | chr8_2:25266797-25266816 | Msa1241580:intron | 30.0% |
| ACTCAATTCTTTAATGGAGA+AGG | + | chr8_2:25266987-25267006 | None:intergenic | 30.0% | |
| ! | TTGAGTATGAAGATTTTCTC+AGG | - | chr8_2:25267001-25267020 | Msa1241580:intron | 30.0% |
| !!! | AGACTTTTCTTTGTTGTTGA+TGG | - | chr8_2:25267125-25267144 | Msa1241580:intron | 30.0% |
| CGTTGCAAAATAAAAAGGAT+TGG | + | chr8_2:25267634-25267653 | None:intergenic | 30.0% | |
| AAACCCGTTGCAAAATAAAA+AGG | + | chr8_2:25267639-25267658 | None:intergenic | 30.0% | |
| !! | TTATTTTGCAACGGGTTTAT+CGG | - | chr8_2:25267641-25267660 | Msa1241580:intron | 30.0% |
| !! | GATGATAATGATTGGTAATG+AGG | - | chr8_2:25267704-25267723 | Msa1241580:intron | 30.0% |
| !! | ATAATGATTGGTAATGAGGA+AGG | - | chr8_2:25267708-25267727 | Msa1241580:intron | 30.0% |
| AAAACAAGTTTCCGTCATAA+AGG | - | chr8_2:25267750-25267769 | Msa1241580:intron | 30.0% | |
| CTTTATTATGGCCTTTATGA+CGG | + | chr8_2:25267764-25267783 | None:intergenic | 30.0% | |
| GTCTGTTGTGATCTTTATTA+TGG | + | chr8_2:25267776-25267795 | None:intergenic | 30.0% | |
| ! | CATAATGCCAACTATTTTAC+AGG | - | chr8_2:25267795-25267814 | Msa1241580:intron | 30.0% |
| CTTGTTACAGAATCTAAATC+AGG | + | chr8_2:25267902-25267921 | None:intergenic | 30.0% | |
| AGATTCTGTAACAAGTTTAG+GGG | - | chr8_2:25267907-25267926 | Msa1241580:intron | 30.0% | |
| ! | GGGTGTGATATGTATATTTT+TGG | - | chr8_2:25268139-25268158 | Msa1241580:intron | 30.0% |
| !!! | TGTATATTTTTGGAATGGAC+TGG | - | chr8_2:25268149-25268168 | Msa1241580:intron | 30.0% |
| ATACATAAAAACACTTGTCC+TGG | - | chr8_2:25268458-25268477 | Msa1241580:intron | 30.0% | |
| !!! | AGTGTTCTTTTTTCTGAACT+AGG | + | chr8_2:25268582-25268601 | None:intergenic | 30.0% |
| TAGTTCAGAAAAAAGAACAC+TGG | - | chr8_2:25268581-25268600 | Msa1241580:intron | 30.0% | |
| CACCTAAAAAAAGGAAGTTA+AGG | + | chr8_2:25268647-25268666 | None:intergenic | 30.0% | |
| AATTTAATACCCTCATTGAC+TGG | - | chr8_2:25268699-25268718 | Msa1241580:intron | 30.0% | |
| TACAAATGCACATGAAGTTA+AGG | + | chr8_2:25268730-25268749 | None:intergenic | 30.0% | |
| TTAAACATGAAGAAAAGCCT+GGG | + | chr8_2:25269028-25269047 | None:intergenic | 30.0% | |
| !!! | ATTTTTTGCTTGAACAACCA+AGG | + | chr8_2:25269231-25269250 | None:intergenic | 30.0% |
| TTGGTTGTTCAAGCAAAAAA+TGG | - | chr8_2:25269230-25269249 | Msa1241580:intron | 30.0% | |
| AAAGATATTCTAAGTCAGGA+TGG | - | chr8_2:25269392-25269411 | Msa1241580:intron | 30.0% | |
| ! | TAAGTGTTCTTTGATTCGTT+TGG | - | chr8_2:25269544-25269563 | Msa1241580:intron | 30.0% |
| !! | ACATCTCTATTTGTTTTCCA+CGG | + | chr8_2:25269596-25269615 | None:intergenic | 30.0% |
| GAACAACTTAAAATTGTCTG+TGG | - | chr8_2:25269618-25269637 | Msa1241580:intron | 30.0% | |
| !!! | TCACTCATGTTTTTTGAACT+AGG | + | chr8_2:25269744-25269763 | None:intergenic | 30.0% |
| AAAAACATGAGTGATACAGA+TGG | - | chr8_2:25269750-25269769 | Msa1241580:intron | 30.0% | |
| CTATAAGACAACTTCCTAAA+CGG | - | chr8_2:25269844-25269863 | Msa1241580:intron | 30.0% | |
| ! | TATATCTTTTCAGACAGTTC+TGG | - | chr8_2:25270102-25270121 | Msa1241580:intron | 30.0% |
| !!! | TAGAATTTATTTTGGGACCA+CGG | - | chr8_2:25270168-25270187 | Msa1241580:intron | 30.0% |
| ! | GTAAGGAACTTGATCATTTT+AGG | - | chr8_2:25270447-25270466 | Msa1241580:intron | 30.0% |
| AACTGAAATCATGTATCTGT+TGG | - | chr8_2:25270537-25270556 | Msa1241580:five_prime_UTR | 30.0% | |
| ACTGAAATCATGTATCTGTT+GGG | - | chr8_2:25270538-25270557 | Msa1241580:five_prime_UTR | 30.0% | |
| GGAAAGTTAGATGGATAGAA+AGG | + | chr8_2:25265092-25265111 | None:intergenic | 35.0% | |
| TTTAACTACTCAACCCACTT+AGG | + | chr8_2:25265712-25265731 | None:intergenic | 35.0% | |
| TGACAAGTATTATGAGATGG+AGG | - | chr8_2:25265828-25265847 | Msa1241580:CDS | 35.0% | |
| GACAAGTATTATGAGATGGA+GGG | - | chr8_2:25265829-25265848 | Msa1241580:CDS | 35.0% | |
| CCAAGCCCATGAAAAATTAT+GGG | + | chr8_2:25265935-25265954 | None:intergenic | 35.0% | |
| !! | CACATAGAGATGTTGATAGT+GGG | + | chr8_2:25266059-25266078 | None:intergenic | 35.0% |
| ! | TCACATAGAGATGTTGATAG+TGG | + | chr8_2:25266060-25266079 | None:intergenic | 35.0% |
| AGTGAACATTATTGGAGTAG+CGG | - | chr8_2:25266132-25266151 | Msa1241580:intron | 35.0% | |
| !!! | GTTTTGTTTGTTAGCTGCTT+AGG | - | chr8_2:25266252-25266271 | Msa1241580:CDS | 35.0% |
| ! | CAGTTTCAGTTGACATTTTG+AGG | - | chr8_2:25266279-25266298 | Msa1241580:CDS | 35.0% |
| !!! | TTCAGTTGACATTTTGAGGT+TGG | - | chr8_2:25266283-25266302 | Msa1241580:CDS | 35.0% |
| !!! | TCAGTTGACATTTTGAGGTT+GGG | - | chr8_2:25266284-25266303 | Msa1241580:CDS | 35.0% |
| ! | GTAGTTATTTCAGACTTGGT+CGG | - | chr8_2:25266364-25266383 | Msa1241580:CDS | 35.0% |
| ! | TAGTTATTTCAGACTTGGTC+GGG | - | chr8_2:25266365-25266384 | Msa1241580:CDS | 35.0% |
| GTAACATCAAAGTCTTGGTA+TGG | - | chr8_2:25266443-25266462 | Msa1241580:CDS | 35.0% | |
| ! | GGTTGAAATATTGGTGGTTA+TGG | - | chr8_2:25266583-25266602 | Msa1241580:intron | 35.0% |
| GTTAGACGGTTCAGTTAATT+CGG | - | chr8_2:25266955-25266974 | Msa1241580:intron | 35.0% | |
| ! | AGATTTTCTCAGGAAAGCAA+TGG | - | chr8_2:25267011-25267030 | Msa1241580:intron | 35.0% |
| !!! | GAAAAAGCATTTTCACGTGA+AGG | - | chr8_2:25267072-25267091 | Msa1241580:intron | 35.0% |
| !!! | CTTTTCTTTGTTGTTGATGG+AGG | - | chr8_2:25267128-25267147 | Msa1241580:intron | 35.0% |
| TGTCTAGATTAATAGGCACT+AGG | - | chr8_2:25267334-25267353 | Msa1241580:intron | 35.0% | |
| CAAAGCAGCAAAAAGATAGT+GGG | + | chr8_2:25267362-25267381 | None:intergenic | 35.0% | |
| TCAAAGCAGCAAAAAGATAG+TGG | + | chr8_2:25267363-25267382 | None:intergenic | 35.0% | |
| AACTATAAGTCGGTTAGACT+CGG | - | chr8_2:25267508-25267527 | Msa1241580:intron | 35.0% | |
| GGATTGTAAAACACAACTCT+CGG | + | chr8_2:25267538-25267557 | None:intergenic | 35.0% | |
| CAAAACTGGAAAGTTCAGTT+TGG | + | chr8_2:25267584-25267603 | None:intergenic | 35.0% | |
| CAAAATAAAAAGGATTGGGC+GGG | + | chr8_2:25267629-25267648 | None:intergenic | 35.0% | |
| GCAAAATAAAAAGGATTGGG+CGG | + | chr8_2:25267630-25267649 | None:intergenic | 35.0% | |
| !! | TATTTTGCAACGGGTTTATC+GGG | - | chr8_2:25267642-25267661 | Msa1241580:intron | 35.0% |
| AGAAAGACTGTGAAAACTAC+CGG | + | chr8_2:25267844-25267863 | None:intergenic | 35.0% | |
| GATAACGCTCACATCTTTAT+GGG | + | chr8_2:25267944-25267963 | None:intergenic | 35.0% | |
| ATGCAATCCTTTGTAGGATT+TGG | + | chr8_2:25267966-25267985 | None:intergenic | 35.0% | |
| AATCCTACAAAGGATTGCAT+AGG | - | chr8_2:25267966-25267985 | Msa1241580:intron | 35.0% | |
| ATAGGATCCATCACTAAAGA+TGG | - | chr8_2:25267984-25268003 | Msa1241580:intron | 35.0% | |
| TAGGATCCATCACTAAAGAT+GGG | - | chr8_2:25267985-25268004 | Msa1241580:intron | 35.0% | |
| CTGAAGAAAAAGGGAGAAAA+TGG | + | chr8_2:25268805-25268824 | None:intergenic | 35.0% | |
| GTGCTATAAATCTCCTATCA+TGG | - | chr8_2:25268890-25268909 | Msa1241580:intron | 35.0% | |
| CTTAAACATGAAGAAAAGCC+TGG | + | chr8_2:25269029-25269048 | None:intergenic | 35.0% | |
| ATAAGGGAAGAAATGTTGTG+TGG | - | chr8_2:25269174-25269193 | Msa1241580:intron | 35.0% | |
| ! | TGTTCTTTGATTCGTTTGGT+AGG | - | chr8_2:25269548-25269567 | Msa1241580:intron | 35.0% |
| ! | TTTTGAACTAGGAGATGCAA+AGG | + | chr8_2:25269733-25269752 | None:intergenic | 35.0% |
| ATGGAACTGAGTCATACAAT+GGG | - | chr8_2:25269769-25269788 | Msa1241580:intron | 35.0% | |
| CGTTTAGGAAGTTGTCTTAT+AGG | + | chr8_2:25269846-25269865 | None:intergenic | 35.0% | |
| TTAGCCCACTCAAATTAGCA+CGG | - | chr8_2:25265609-25265628 | Msa1241580:CDS | 40.0% | |
| !! | TAGCTCAGTGGTATTGACTT+GGG | + | chr8_2:25265688-25265707 | None:intergenic | 40.0% |
| !! | TTAGCTCAGTGGTATTGACT+TGG | + | chr8_2:25265689-25265708 | None:intergenic | 40.0% |
| ! | CCCATAATTTTTCATGGGCT+TGG | - | chr8_2:25265932-25265951 | Msa1241580:CDS | 40.0% |
| GCCAAGCCCATGAAAAATTA+TGG | + | chr8_2:25265936-25265955 | None:intergenic | 40.0% | |
| AGAGTTTCTTCTAGGTCAAG+TGG | - | chr8_2:25266156-25266175 | Msa1241580:intron | 40.0% | |
| !!! | GGCTGACAGTGTTCATTTTT+TGG | - | chr8_2:25266177-25266196 | Msa1241580:intron | 40.0% |
| GAATAAGCACAATTAGGGAG+TGG | - | chr8_2:25266521-25266540 | Msa1241580:CDS | 40.0% | |
| AATGAGTGTAACAGCTGAGT+TGG | - | chr8_2:25266685-25266704 | Msa1241580:intron | 40.0% | |
| TTCAAGGTCCTCACTCAAAT+AGG | - | chr8_2:25266720-25266739 | Msa1241580:intron | 40.0% | |
| TTACAATTAGGGGTGAGCAT+CGG | - | chr8_2:25266807-25266826 | Msa1241580:intron | 40.0% | |
| CTTCGGTTTCACTTGAGATT+GGG | + | chr8_2:25266862-25266881 | None:intergenic | 40.0% | |
| TCTTCGGTTTCACTTGAGAT+TGG | + | chr8_2:25266863-25266882 | None:intergenic | 40.0% | |
| GGGTCTCTTTATTCTCTCTT+CGG | + | chr8_2:25266879-25266898 | None:intergenic | 40.0% | |
| TAGAAGTGGAAGCCATTACA+GGG | - | chr8_2:25267170-25267189 | Msa1241580:intron | 40.0% | |
| ! | ACACAATGATGTGAGTTGAC+AGG | - | chr8_2:25267383-25267402 | Msa1241580:intron | 40.0% |
| ! | AGTTCAGTTTGGCATGGTTT+TGG | + | chr8_2:25267573-25267592 | None:intergenic | 40.0% |
| GTTGCTGCCTGTAAAATAGT+TGG | + | chr8_2:25267805-25267824 | None:intergenic | 40.0% | |
| GGATAACGCTCACATCTTTA+TGG | + | chr8_2:25267945-25267964 | None:intergenic | 40.0% | |
| GCGTTATCCAAATCCTACAA+AGG | - | chr8_2:25267956-25267975 | Msa1241580:intron | 40.0% | |
| GATCCTATGCAATCCTTTGT+AGG | + | chr8_2:25267972-25267991 | None:intergenic | 40.0% | |
| AATGCTCCCATCTTTAGTGA+TGG | + | chr8_2:25267994-25268013 | None:intergenic | 40.0% | |
| ATTAGATGCATGTGAGGTGT+GGG | - | chr8_2:25268119-25268138 | Msa1241580:intron | 40.0% | |
| AAGGTTTCACCAGTCAATGA+GGG | + | chr8_2:25268711-25268730 | None:intergenic | 40.0% | |
| TAAGGTTTCACCAGTCAATG+AGG | + | chr8_2:25268712-25268731 | None:intergenic | 40.0% | |
| !! | AAAGTTGGTACTGTGTGACT+AGG | + | chr8_2:25268995-25269014 | None:intergenic | 40.0% |
| TTGCTACATGCAAACAACAC+AGG | + | chr8_2:25269112-25269131 | None:intergenic | 40.0% | |
| !! | GTGTTGTTTGCATGTAGCAA+TGG | - | chr8_2:25269112-25269131 | Msa1241580:intron | 40.0% |
| ! | TCAATGAGGCACTTATCCAT+TGG | + | chr8_2:25269206-25269225 | None:intergenic | 40.0% |
| ! | TTTCGAGTGGAATCCAGATA+CGG | - | chr8_2:25269415-25269434 | Msa1241580:intron | 40.0% |
| ATTATCAAGCTCCAAGACGT+TGG | - | chr8_2:25269643-25269662 | Msa1241580:intron | 40.0% | |
| TTATCAAGCTCCAAGACGTT+GGG | - | chr8_2:25269644-25269663 | Msa1241580:intron | 40.0% | |
| GCAAAGATGAAGGATGGTAA+TGG | - | chr8_2:25269666-25269685 | Msa1241580:intron | 40.0% | |
| GATGGAACTGAGTCATACAA+TGG | - | chr8_2:25269768-25269787 | Msa1241580:intron | 40.0% | |
| ! | CATTATAGCCATCTGGAATC+TGG | + | chr8_2:25269809-25269828 | None:intergenic | 40.0% |
| AGTTGTCTTATAGGTACCAC+TGG | + | chr8_2:25269837-25269856 | None:intergenic | 40.0% | |
| !! | ATCTTTTCAGACAGTTCTGG+TGG | - | chr8_2:25270105-25270124 | Msa1241580:intron | 40.0% |
| ACGAAAACGCACAATACACT+TGG | + | chr8_2:25270145-25270164 | None:intergenic | 40.0% | |
| AATGAGTCGAGTAATCTGCA+AGG | + | chr8_2:25270406-25270425 | None:intergenic | 40.0% | |
| ! | TTTTGCCTGCTTATGGATGT+TGG | - | chr8_2:25270481-25270500 | Msa1241580:intron | 40.0% |
| TTTGCCTGCTTATGGATGTT+GGG | - | chr8_2:25270482-25270501 | Msa1241580:intron | 40.0% | |
| !! | GACGGTTCTGGAAAGTTAGA+TGG | + | chr8_2:25265101-25265120 | None:intergenic | 45.0% |
| GTCAATGGAGTGAAGGAAGA+CGG | + | chr8_2:25265119-25265138 | None:intergenic | 45.0% | |
| ATTGTAGAGAGACGCATCAG+CGG | + | chr8_2:25265143-25265162 | None:intergenic | 45.0% | |
| TCCTCCGTGCTAATTTGAGT+GGG | + | chr8_2:25265616-25265635 | None:intergenic | 45.0% | |
| ! | GAATCGAATCTGAGACCTTG+AGG | - | chr8_2:25265636-25265655 | Msa1241580:CDS | 45.0% |
| TACCACTGAGCTAACCTAAG+TGG | - | chr8_2:25265695-25265714 | Msa1241580:CDS | 45.0% | |
| ACCACTGAGCTAACCTAAGT+GGG | - | chr8_2:25265696-25265715 | Msa1241580:CDS | 45.0% | |
| !! | CAAAATGGGCTGAGCTTAAC+CGG | - | chr8_2:25265897-25265916 | Msa1241580:CDS | 45.0% |
| !! | TAGAGATGTTGATAGTGGGC+CGG | + | chr8_2:25266055-25266074 | None:intergenic | 45.0% |
| GTAGCGGTAGAGTTTCTTCT+AGG | - | chr8_2:25266148-25266167 | Msa1241580:intron | 45.0% | |
| GCGGAGCACATTATGTAATG+TGG | - | chr8_2:25266562-25266581 | Msa1241580:intron | 45.0% | |
| TTGGACTGCAATGAGCTTCA+AGG | - | chr8_2:25266704-25266723 | Msa1241580:intron | 45.0% | |
| GTAGAAGTGGAAGCCATTAC+AGG | - | chr8_2:25267169-25267188 | Msa1241580:intron | 45.0% | |
| CTAACCTTCCTTCCCTGTAA+TGG | + | chr8_2:25267185-25267204 | None:intergenic | 45.0% | |
| ! | CAATGATGTGAGTTGACAGG+AGG | - | chr8_2:25267386-25267405 | Msa1241580:intron | 45.0% |
| !!! | CAGTTTGGCATGGTTTTGGA+CGG | + | chr8_2:25267569-25267588 | None:intergenic | 45.0% |
| CTGGAAAGTTCAGTTTGGCA+TGG | + | chr8_2:25267579-25267598 | None:intergenic | 45.0% | |
| TAAAAAGGATTGGGCGGGTA+CGG | + | chr8_2:25267624-25267643 | None:intergenic | 45.0% | |
| ATAGGGGTGAGCAGATATAC+CGG | + | chr8_2:25267680-25267699 | None:intergenic | 45.0% | |
| !! | GATTGGTAATGAGGAAGGCA+TGG | - | chr8_2:25267713-25267732 | Msa1241580:intron | 45.0% |
| ! | AATGAGGAAGGCATGGATCT+CGG | - | chr8_2:25267720-25267739 | Msa1241580:intron | 45.0% |
| ACGTTACATGACCTGTACTG+TGG | - | chr8_2:25268053-25268072 | Msa1241580:intron | 45.0% | |
| GTGTCCATTAGATGCATGTG+AGG | - | chr8_2:25268113-25268132 | Msa1241580:intron | 45.0% | |
| CACACCTCACATGCATCTAA+TGG | + | chr8_2:25268120-25268139 | None:intergenic | 45.0% | |
| CATTAGATGCATGTGAGGTG+TGG | - | chr8_2:25268118-25268137 | Msa1241580:intron | 45.0% | |
| CTGACAACACCAGTCAATGA+GGG | + | chr8_2:25268486-25268505 | None:intergenic | 45.0% | |
| TCTGACAACACCAGTCAATG+AGG | + | chr8_2:25268487-25268506 | None:intergenic | 45.0% | |
| ! | TGATGAAGAGTGCACTAGCA+GGG | - | chr8_2:25268532-25268551 | Msa1241580:intron | 45.0% |
| !! | ATGGCGACTGAGCTTGTTAT+AGG | - | chr8_2:25268909-25268928 | Msa1241580:intron | 45.0% |
| GAGAGATAGAGATCAACTCC+AGG | - | chr8_2:25268952-25268971 | Msa1241580:intron | 45.0% | |
| AACTCCAGGACTCAATCCTA+TGG | - | chr8_2:25268966-25268985 | Msa1241580:intron | 45.0% | |
| TGATCTGCAAGGGCAAAGAA+AGG | - | chr8_2:25269142-25269161 | Msa1241580:intron | 45.0% | |
| TGTTGTGTGGTCCATTCCAA+TGG | - | chr8_2:25269187-25269206 | Msa1241580:intron | 45.0% | |
| ! | GAGGCACTTATCCATTGGAA+TGG | + | chr8_2:25269201-25269220 | None:intergenic | 45.0% |
| TAAGTGCCTCATTGAAGCCT+TGG | - | chr8_2:25269211-25269230 | Msa1241580:intron | 45.0% | |
| GAACAACCAAGGCTTCAATG+AGG | + | chr8_2:25269220-25269239 | None:intergenic | 45.0% | |
| TAAGTCAGGATGGTTTCGAG+TGG | - | chr8_2:25269402-25269421 | Msa1241580:intron | 45.0% | |
| CACTCAATCATCTCCGTATC+TGG | + | chr8_2:25269431-25269450 | None:intergenic | 45.0% | |
| TAGGCACATCGAGATGCAAA+AGG | - | chr8_2:25269567-25269586 | Msa1241580:intron | 45.0% | |
| TTCATCTTTGCCCAACGTCT+TGG | + | chr8_2:25269657-25269676 | None:intergenic | 45.0% | |
| AAGACGTTGGGCAAAGATGA+AGG | - | chr8_2:25269656-25269675 | Msa1241580:intron | 45.0% | |
| !! | GAAGGATGGTAATGGTCTAG+TGG | - | chr8_2:25269674-25269693 | Msa1241580:intron | 45.0% |
| GGTGGACATGAAAAATTGCG+AGG | - | chr8_2:25269695-25269714 | Msa1241580:intron | 45.0% | |
| GGACATGAAAAATTGCGAGG+AGG | - | chr8_2:25269698-25269717 | Msa1241580:intron | 45.0% | |
| TGAACTAGGAGATGCAAAGG+AGG | + | chr8_2:25269730-25269749 | None:intergenic | 45.0% | |
| TGTCTTATAGGTACCACTGG+AGG | + | chr8_2:25269834-25269853 | None:intergenic | 45.0% | |
| TGATACCTCTGAGCTGTTAC+AGG | - | chr8_2:25269962-25269981 | Msa1241580:intron | 45.0% | |
| ! | AGGCTGTGATGGAGATAGAT+GGG | - | chr8_2:25269982-25270001 | Msa1241580:intron | 45.0% |
| ! | TGTGATGGAGATAGATGGGT+TGG | - | chr8_2:25269986-25270005 | Msa1241580:intron | 45.0% |
| !! | AGAAGGCTCTGGCTTTGATA+GGG | + | chr8_2:25270055-25270074 | None:intergenic | 45.0% |
| !! | AAGAAGGCTCTGGCTTTGAT+AGG | + | chr8_2:25270056-25270075 | None:intergenic | 45.0% |
| !! | TTTTCAGACAGTTCTGGTGG+TGG | - | chr8_2:25270108-25270127 | Msa1241580:intron | 45.0% |
| !!! | ATTTTGGGACCACGGTTGAA+CGG | - | chr8_2:25270176-25270195 | Msa1241580:intron | 45.0% |
| GTAATCTGCAAGGTCGAAAG+AGG | + | chr8_2:25270396-25270415 | None:intergenic | 45.0% | |
| !!! | AGGGGTTTTTTGCCTGCTTA+TGG | - | chr8_2:25270474-25270493 | Msa1241580:intron | 45.0% |
| !! | TAGTTAAATTTAATAAATAA+GGG | - | chr8_2:25265724-25265743 | Msa1241580:CDS | 5.0% |
| CTGTCTGTGCATAGTTGCTG+AGG | - | chr8_2:25265513-25265532 | Msa1241580:three_prime_UTR | 50.0% | |
| CTCCTCCGTGCTAATTTGAG+TGG | + | chr8_2:25265617-25265636 | None:intergenic | 50.0% | |
| ! | TCGAATCTGAGACCTTGAGG+AGG | - | chr8_2:25265639-25265658 | Msa1241580:CDS | 50.0% |
| !! | GTGGTATTGACTTGGGACCT+GGG | + | chr8_2:25265681-25265700 | None:intergenic | 50.0% |
| !! | AGTGGTATTGACTTGGGACC+TGG | + | chr8_2:25265682-25265701 | None:intergenic | 50.0% |
| ! | ACCCACTTAGGTTAGCTCAG+TGG | + | chr8_2:25265700-25265719 | None:intergenic | 50.0% |
| !! | ATTGTGTTGGGCTAGCTCGT+TGG | - | chr8_2:25266021-25266040 | Msa1241580:CDS | 50.0% |
| !! | TTGTGTTGGGCTAGCTCGTT+GGG | - | chr8_2:25266022-25266041 | Msa1241580:CDS | 50.0% |
| CCATGCTCAAGCTTACACAC+AGG | + | chr8_2:25266327-25266346 | None:intergenic | 50.0% | |
| CCTGTGTGTAAGCTTGAGCA+TGG | - | chr8_2:25266324-25266343 | Msa1241580:CDS | 50.0% | |
| !! | AATTAGGGGTGAGCATCGGT+CGG | - | chr8_2:25266811-25266830 | Msa1241580:intron | 50.0% |
| !! | TGGGTTTTGTGAACCGAACC+CGG | + | chr8_2:25266843-25266862 | None:intergenic | 50.0% |
| TGCTTCGAACGGATGGAAGT+GGG | + | chr8_2:25266899-25266918 | None:intergenic | 50.0% | |
| TTGCTTCGAACGGATGGAAG+TGG | + | chr8_2:25266900-25266919 | None:intergenic | 50.0% | |
| CTTCCATCCGTTCGAAGCAA+CGG | - | chr8_2:25266900-25266919 | Msa1241580:intron | 50.0% | |
| AAACCGTTGCTTCGAACGGA+TGG | + | chr8_2:25266906-25266925 | None:intergenic | 50.0% | |
| ATCCGTTCGAAGCAACGGTT+TGG | - | chr8_2:25266905-25266924 | Msa1241580:intron | 50.0% | |
| GACCAAACCGTTGCTTCGAA+CGG | + | chr8_2:25266910-25266929 | None:intergenic | 50.0% | |
| !! | GTTCGAAGCAACGGTTTGGT+CGG | - | chr8_2:25266909-25266928 | Msa1241580:intron | 50.0% |
| TTTGCGGTTGGAATCGGTTG+CGG | - | chr8_2:25266932-25266951 | Msa1241580:intron | 50.0% | |
| AGTGGAAGCCATTACAGGGA+AGG | - | chr8_2:25267174-25267193 | Msa1241580:intron | 50.0% | |
| GAAGCCATTACAGGGAAGGA+AGG | - | chr8_2:25267178-25267197 | Msa1241580:intron | 50.0% | |
| TAGCTAGTGAGAGAGACGCA+AGG | - | chr8_2:25267202-25267221 | Msa1241580:intron | 50.0% | |
| ! | GGTCTACGGGTTGACAAAAC+TGG | + | chr8_2:25267598-25267617 | None:intergenic | 50.0% |
| AAAAAGGATTGGGCGGGTAC+GGG | + | chr8_2:25267623-25267642 | None:intergenic | 50.0% | |
| ! | GCAACGGGTTTATCGGGTTT+CGG | - | chr8_2:25267648-25267667 | Msa1241580:intron | 50.0% |
| CAGCAACCATGACTGCATTG+AGG | - | chr8_2:25267818-25267837 | Msa1241580:intron | 50.0% | |
| AACCATGACTGCATTGAGGC+CGG | - | chr8_2:25267822-25267841 | Msa1241580:intron | 50.0% | |
| AAGTGACACAGCCACAGTAC+AGG | + | chr8_2:25268067-25268086 | None:intergenic | 50.0% | |
| !! | GTACTGTGGCTGTGTCACTT+TGG | - | chr8_2:25268067-25268086 | Msa1241580:intron | 50.0% |
| ! | CTGATGAAGAGTGCACTAGC+AGG | - | chr8_2:25268531-25268550 | Msa1241580:intron | 50.0% |
| ACAAGCTCAGTCGCCATGAT+AGG | + | chr8_2:25268906-25268925 | None:intergenic | 50.0% | |
| GATGCCATAGGATTGAGTCC+TGG | + | chr8_2:25268973-25268992 | None:intergenic | 50.0% | |
| CTGTGTGACTAGGATGCCAT+AGG | + | chr8_2:25268985-25269004 | None:intergenic | 50.0% | |
| CTGGGCGCAACAGTTAAAGT+TGG | + | chr8_2:25269010-25269029 | None:intergenic | 50.0% | |
| CAACTTTAACTGTTGCGCCC+AGG | - | chr8_2:25269008-25269027 | Msa1241580:intron | 50.0% | |
| !! | ATGGAGCACTGTGATCTGCA+AGG | - | chr8_2:25269131-25269150 | Msa1241580:intron | 50.0% |
| !! | TGGAGCACTGTGATCTGCAA+GGG | - | chr8_2:25269132-25269151 | Msa1241580:intron | 50.0% |
| GACTGAAGACGCTGAAGAAG+AGG | - | chr8_2:25269357-25269376 | Msa1241580:intron | 50.0% | |
| AGTGTGATCACGACGAGCTT+TGG | - | chr8_2:25269447-25269466 | Msa1241580:intron | 50.0% | |
| CGAGATGCAAAAGGATTCCG+TGG | - | chr8_2:25269576-25269595 | Msa1241580:intron | 50.0% | |
| CGTTGGGCAAAGATGAAGGA+TGG | - | chr8_2:25269660-25269679 | Msa1241580:intron | 50.0% | |
| !! | GGATGGTAATGGTCTAGTGG+TGG | - | chr8_2:25269677-25269696 | Msa1241580:intron | 50.0% |
| TACAATGGGCCTCCTGAGTA+TGG | - | chr8_2:25269783-25269802 | Msa1241580:intron | 50.0% | |
| ! | TCTGGAATCTGGCCATACTC+AGG | + | chr8_2:25269798-25269817 | None:intergenic | 50.0% |
| GAGTATGGCCAGATTCCAGA+TGG | - | chr8_2:25269798-25269817 | Msa1241580:intron | 50.0% | |
| GGAGGCTCATTATAGCCATC+TGG | + | chr8_2:25269816-25269835 | None:intergenic | 50.0% | |
| TGGCTATAATGAGCCTCCAG+TGG | - | chr8_2:25269818-25269837 | Msa1241580:intron | 50.0% | |
| TCTGAGCTACGAGACCGTTT+AGG | + | chr8_2:25269861-25269880 | None:intergenic | 50.0% | |
| ! | GCACGATGCATTGATGACAG+TGG | - | chr8_2:25269887-25269906 | Msa1241580:intron | 50.0% |
| CGATCGAATCAGCCAATCGT+CGG | + | chr8_2:25269923-25269942 | None:intergenic | 50.0% | |
| TGAGCTGTTACAGGCTGTGA+TGG | - | chr8_2:25269971-25269990 | Msa1241580:intron | 50.0% | |
| ! | CAGGCTGTGATGGAGATAGA+TGG | - | chr8_2:25269981-25270000 | Msa1241580:intron | 50.0% |
| !!! | TTTTGGGACCACGGTTGAAC+GGG | - | chr8_2:25270177-25270196 | Msa1241580:intron | 50.0% |
| AGCTCCCAACATCCATAAGC+AGG | + | chr8_2:25270489-25270508 | None:intergenic | 50.0% | |
| !! | TGGGAGCTTTGTTGCTGTGA+AGG | - | chr8_2:25270501-25270520 | Msa1241580:intron | 50.0% |
| GGAGTGAAGGAAGACGGTTC+TGG | + | chr8_2:25265113-25265132 | None:intergenic | 55.0% | |
| GCCCACTCAAATTAGCACGG+AGG | - | chr8_2:25265612-25265631 | Msa1241580:CDS | 55.0% | |
| ! | ATGGGCTGAGCTTAACCGGA+CGG | - | chr8_2:25265901-25265920 | Msa1241580:CDS | 55.0% |
| ! | TTATGGGCTAATGGGCCGTC+CGG | + | chr8_2:25265919-25265938 | None:intergenic | 55.0% |
| TAGCTCGTTGGGCTTTCGAC+CGG | - | chr8_2:25266033-25266052 | Msa1241580:CDS | 55.0% | |
| !! | ATTAGGGGTGAGCATCGGTC+GGG | - | chr8_2:25266812-25266831 | Msa1241580:intron | 55.0% |
| !! | GCAACGGTTTGGTCGGTTTG+CGG | - | chr8_2:25266916-25266935 | Msa1241580:intron | 55.0% |
| !! | GGTCGGTTTGCGGTTGGAAT+CGG | - | chr8_2:25266926-25266945 | Msa1241580:intron | 55.0% |
| TTGCGGTTGGAATCGGTTGC+GGG | - | chr8_2:25266933-25266952 | Msa1241580:intron | 55.0% | |
| !! | GGAATCGGTTGCGGGTTAGA+CGG | - | chr8_2:25266941-25266960 | Msa1241580:intron | 55.0% |
| !!! | TGGTTTTGGACGGTCGAGGT+CGG | + | chr8_2:25267559-25267578 | None:intergenic | 55.0% |
| CGGGTTTATCGGGTTTCGGT+CGG | - | chr8_2:25267652-25267671 | Msa1241580:intron | 55.0% | |
| ! | TATCGGGTTTCGGTCGGTTC+CGG | - | chr8_2:25267658-25267677 | Msa1241580:intron | 55.0% |
| TACCGGCCTCAATGCAGTCA+TGG | + | chr8_2:25267827-25267846 | None:intergenic | 55.0% | |
| !! | GTGGCTGTGTCACTTTGGCT+TGG | - | chr8_2:25268072-25268091 | Msa1241580:intron | 55.0% |
| GTCCTGGAACCCTCATTGAC+TGG | - | chr8_2:25268474-25268493 | Msa1241580:intron | 55.0% | |
| CACCAGTCAATGAGGGTTCC+AGG | + | chr8_2:25268479-25268498 | None:intergenic | 55.0% | |
| GGAATCTGGCCATACTCAGG+AGG | + | chr8_2:25269795-25269814 | None:intergenic | 55.0% | |
| GGCATCAAGCATCCGACGAT+TGG | - | chr8_2:25269908-25269927 | Msa1241580:intron | 55.0% | |
| CACAGCCTGTAACAGCTCAG+AGG | + | chr8_2:25269970-25269989 | None:intergenic | 55.0% | |
| !! | GGCTCTGGCTTTGATAGGGT+CGG | + | chr8_2:25270051-25270070 | None:intergenic | 55.0% |
| TGAGAACACCCGTTCAACCG+TGG | + | chr8_2:25270188-25270207 | None:intergenic | 55.0% | |
| CAGCGGCGTCAATGGAGTGA+AGG | + | chr8_2:25265126-25265145 | None:intergenic | 60.0% | |
| AGACGCATCAGCGGCGTCAA+TGG | + | chr8_2:25265134-25265153 | None:intergenic | 60.0% | |
| GAGACCTTGAGGAGGAGCTC+AGG | - | chr8_2:25265647-25265666 | Msa1241580:CDS | 60.0% | |
| TGCTCCTGAGCTCCTCCTCA+AGG | + | chr8_2:25265654-25265673 | None:intergenic | 60.0% | |
| !! | CGGTTTGGTCGGTTTGCGGT+TGG | - | chr8_2:25266920-25266939 | Msa1241580:intron | 60.0% |
| !!! | GGCATGGTTTTGGACGGTCG+AGG | + | chr8_2:25267563-25267582 | None:intergenic | 60.0% |
| ! | GAGCTCAGGAGCACACTCCC+AGG | - | chr8_2:25265661-25265680 | Msa1241580:CDS | 65.0% |
| !! | GGGTGAGCATCGGTCGGGTT+CGG | - | chr8_2:25266817-25266836 | Msa1241580:intron | 65.0% |
| AGGATTGGGCGGGTACGGGT+CGG | + | chr8_2:25267619-25267638 | None:intergenic | 65.0% | |
| !! | GAGCATCGGTCGGGTTCGGC+CGG | - | chr8_2:25266821-25266840 | Msa1241580:intron | 70.0% |
| !! | AGCATCGGTCGGGTTCGGCC+GGG | - | chr8_2:25266822-25266841 | Msa1241580:intron | 70.0% |
| GCGGGTACGGGTCGGTCTAC+GGG | + | chr8_2:25267611-25267630 | None:intergenic | 70.0% | |
| GGCGGGTACGGGTCGGTCTA+CGG | + | chr8_2:25267612-25267631 | None:intergenic | 70.0% | |
| CGGTCGGGTTCGGCCGGGTT+CGG | - | chr8_2:25266827-25266846 | Msa1241580:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 25265082 | 25270602 | 25265082 | ID=Msa1241580;Name=Msa1241580 |
| chr8_2 | mRNA | 25265082 | 25270602 | 25265082 | ID=Msa1241580-mRNA-1;Parent=Msa1241580;Name=Msa1241580-mRNA-1;_AED=0.03;_eAED=0.03;_QI=100|1|1|1|0.5|0.33|3|466|306 |
| chr8_2 | exon | 25265082 | 25266114 | 25265082 | ID=Msa1241580-mRNA-1:exon:8919;Parent=Msa1241580-mRNA-1 |
| chr8_2 | exon | 25266200 | 25266555 | 25266200 | ID=Msa1241580-mRNA-1:exon:8918;Parent=Msa1241580-mRNA-1 |
| chr8_2 | exon | 25270505 | 25270602 | 25270505 | ID=Msa1241580-mRNA-1:exon:8917;Parent=Msa1241580-mRNA-1 |
| chr8_2 | five_prime_UTR | 25270505 | 25270602 | 25270505 | ID=Msa1241580-mRNA-1:five_prime_utr;Parent=Msa1241580-mRNA-1 |
| chr8_2 | five_prime_UTR | 25266554 | 25266555 | 25266554 | ID=Msa1241580-mRNA-1:five_prime_utr;Parent=Msa1241580-mRNA-1 |
| chr8_2 | CDS | 25266200 | 25266553 | 25266200 | ID=Msa1241580-mRNA-1:cds;Parent=Msa1241580-mRNA-1 |
| chr8_2 | CDS | 25265548 | 25266114 | 25265548 | ID=Msa1241580-mRNA-1:cds;Parent=Msa1241580-mRNA-1 |
| chr8_2 | three_prime_UTR | 25265082 | 25265547 | 25265082 | ID=Msa1241580-mRNA-1:three_prime_utr;Parent=Msa1241580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
