AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1283240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1283240 MtrunA17_Chr8g0355041 97.338 263 7 0 1 263 459 721 0.0 531
Msa1283240 MtrunA17_Chr5g0415181 76.684 193 20 1 1 193 376 543 7.81e-100 301
Msa1283240 MtrunA17_Chr8g0355051 92.908 141 10 0 60 200 14 154 3.02e-95 276
Msa1283240 MtrunA17_Chr4g0041591 34.826 201 127 2 2 201 457 654 4.67e-34 130
Msa1283240 MtrunA17_Chr3g0138611 40.367 109 65 0 1 109 203 311 2.22e-26 105
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1283240 AT1G60560.1 65.891 258 77 1 1 258 457 703 3.00e-119 357
Msa1283240 AT4G13970.2 37.561 205 124 2 2 205 283 484 2.91e-41 149
Msa1283240 AT4G13970.1 37.561 205 124 2 2 205 459 660 4.76e-41 150
Msa1283240 AT1G60560.2 84.091 44 7 0 1 44 457 500 3.11e-18 84.3

Find 179 sgRNAs with CRISPR-Local

Find 446 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGTCAGACCCTTTCATCTT+AGG 0.173220 8_3:+24762879 Msa1283240:five_prime_UTR
TATAACCTTCTTTCACATTC+TGG 0.214883 8_3:-24766011 None:intergenic
CAACTCTATCATAAGGAATA+AGG 0.217668 8_3:-24761087 None:intergenic
GACTTAACTTGGACTAAGTT+TGG 0.231965 8_3:+24761037 Msa1283240:five_prime_UTR
TGAAGATCGTTTGCCAATAT+TGG 0.233970 8_3:-24766478 None:intergenic
GCAACTCAGTTGTTAACTTA+TGG 0.236095 8_3:-24765942 None:intergenic
TTATACCTGACAATACTTCT+AGG 0.237742 8_3:+24766736 Msa1283240:three_prime_UTR
GATTCAATAAATGAATATTT+AGG 0.239947 8_3:-24766861 None:intergenic
TTTCAAATTTCAGAAATTAT+TGG 0.243551 8_3:-24760914 None:intergenic
TCATTTGGCCCAGAAAATTA+TGG 0.245093 8_3:+24762354 Msa1283240:five_prime_UTR
TGTTGACCAAACTGATTTCT+TGG 0.248536 8_3:+24763588 Msa1283240:five_prime_UTR
TTTCATTCTGTGATTGTTCT+TGG 0.250215 8_3:+24766175 Msa1283240:CDS
AAAATTTGTTGGCGTATTAT+TGG 0.253995 8_3:+24767032 Msa1283240:three_prime_UTR
CTAATGCTCCAGAGGCTTCC+TGG 0.257802 8_3:-24765840 None:intergenic
TCAATTTCGGCAACTCCTTC+TGG 0.290502 8_3:+24766498 Msa1283240:CDS
CTGAATAATTCAACTAATAT+TGG 0.292288 8_3:+24766405 Msa1283240:CDS
TGAATTTCATTACATATATA+TGG 0.301917 8_3:-24762609 None:intergenic
GACAATTGTGTACAGCATTT+GGG 0.302961 8_3:+24763519 Msa1283240:five_prime_UTR
TTCTCCAAGATATTCTCTTC+TGG 0.310022 8_3:-24762666 None:intergenic
GTCTACTCATGAGCTGGATT+TGG 0.314206 8_3:+24762785 Msa1283240:five_prime_UTR
CAAAGCCTGATGTGTCTAAA+TGG 0.318755 8_3:+24763195 Msa1283240:five_prime_UTR
GGACAATTGTGTACAGCATT+TGG 0.325700 8_3:+24763518 Msa1283240:five_prime_UTR
TAAACAATATGCCTCTGAAA+TGG 0.327119 8_3:+24766436 Msa1283240:CDS
GCAGCTTAACACACATAGTT+TGG 0.329117 8_3:+24766136 Msa1283240:CDS
TATGTACATATAAAATTTGT+TGG 0.342310 8_3:+24767021 Msa1283240:three_prime_UTR
TGGTACCTTGAAGGAGTATA+AGG 0.354758 8_3:+24761189 Msa1283240:five_prime_UTR
AGGCTATTGACTTGTGCATT+TGG 0.358551 8_3:-24762720 None:intergenic
TGAAGGTACTGGTGCTCATT+TGG 0.359766 8_3:+24762339 Msa1283240:intron
TTTGAATTTGATCTAGCATT+TGG 0.360298 8_3:-24766371 None:intergenic
TGGCAAACGATCTTCAATTT+CGG 0.361508 8_3:+24766485 Msa1283240:CDS
TGATTCCTCCATTCTATCTC+TGG 0.362006 8_3:-24766678 None:intergenic
ACTTAACTTGGACTAAGTTT+GGG 0.366809 8_3:+24761038 Msa1283240:five_prime_UTR
TTTCAAGTGCTTAGTTTACT+TGG 0.367899 8_3:+24766925 Msa1283240:three_prime_UTR
GAATACGCCATAGTGAAAAT+AGG 0.368753 8_3:-24763420 None:intergenic
GTTGCAGCTGCCATTCTGTT+TGG 0.371205 8_3:-24762905 None:intergenic
TGGAATATTTCAGAGTGTCC+TGG 0.375553 8_3:+24763608 Msa1283240:five_prime_UTR
GAGAAAGATCTAACCAATCT+TGG 0.377361 8_3:-24763635 None:intergenic
CTGGCAAGCCAGGAAGCCTC+TGG 0.378836 8_3:+24765832 Msa1283240:CDS
AAGAAACGCAGAACCAATAT+TGG 0.379365 8_3:+24766465 Msa1283240:CDS
GTTTGCGTTGGACTTGTCAT+TGG 0.379996 8_3:+24766338 Msa1283240:CDS
CTGCAACAAATGGTTCGTTT+TGG 0.384256 8_3:+24762921 Msa1283240:five_prime_UTR
TATCATATGTTGAAACATAA+TGG 0.392285 8_3:-24766604 None:intergenic
CATTTGGCCCAGAAAATTAT+GGG 0.397036 8_3:+24762355 Msa1283240:five_prime_UTR
ATGATTTGTGAAAATCTTCA+AGG 0.398133 8_3:+24766240 Msa1283240:CDS
CGTGTAGAGTGTTGTCGTTT+TGG 0.400197 8_3:-24760628 None:intergenic
CACAAATACGTCACTTGCCT+TGG 0.403243 8_3:+24763546 Msa1283240:five_prime_UTR
TGCCTTGGAACAACTTATGC+TGG 0.406463 8_3:+24763561 Msa1283240:five_prime_UTR
CGTTGGACTTGTCATTGGCT+TGG 0.407304 8_3:+24766343 Msa1283240:CDS
AACTATAGCCATCTCCATAA+AGG 0.407802 8_3:-24760957 None:intergenic
TCGAATTTGCGCTGCAATGA+AGG 0.411779 8_3:-24760675 None:intergenic
CAAAACCATACAATCACAAA+AGG 0.416674 8_3:+24760698 Msa1283240:five_prime_UTR
AACTCTATCATAAGGAATAA+GGG 0.419590 8_3:-24761086 None:intergenic
AGGCGTCATGTTAATACGTC+TGG 0.425938 8_3:+24762528 Msa1283240:five_prime_UTR
AACGCAAACGAATCGTCAAC+TGG 0.430046 8_3:-24766324 None:intergenic
AGTCAGACCCTTTCATCTTA+GGG 0.430987 8_3:+24762880 Msa1283240:five_prime_UTR
TTTCTGCTGCTGACTTAACT+TGG 0.431406 8_3:+24761026 Msa1283240:five_prime_UTR
AAATTTGCCACTGGCAAGCC+AGG 0.432556 8_3:+24765822 Msa1283240:CDS
AACACACATAGTTTGGAATC+CGG 0.434512 8_3:+24766143 Msa1283240:CDS
ATCATCCTTATACTCCTTCA+AGG 0.435511 8_3:-24761194 None:intergenic
TTCTCAGTATGTTCACAAGC+TGG 0.439459 8_3:+24762746 Msa1283240:five_prime_UTR
TCCAAGGTGACCGCAGAGTC+GGG 0.447010 8_3:-24766069 None:intergenic
TAAAAGCTGAACAAAACATA+TGG 0.452208 8_3:-24766716 None:intergenic
TTAAGCCATTTAGACACATC+AGG 0.452483 8_3:-24763200 None:intergenic
AATATTCCAAGAAATCAGTT+TGG 0.454936 8_3:-24763594 None:intergenic
AAAGCATCAACTCTATCATA+AGG 0.460556 8_3:-24761094 None:intergenic
GAATTTGATCTAGCATTTGG+TGG 0.469172 8_3:-24766368 None:intergenic
AGAGGAAGGAAACGGACTAT+TGG 0.472848 8_3:+24761169 Msa1283240:five_prime_UTR
AAACAATATGCCTCTGAAAT+GGG 0.473142 8_3:+24766437 Msa1283240:CDS
TGGTTGAACCTTTATGGAGA+TGG 0.481428 8_3:+24760949 Msa1283240:five_prime_UTR
GGAATATTTCAGAGTGTCCT+GGG 0.483202 8_3:+24763609 Msa1283240:five_prime_UTR
CTGAGTTGCATTCAAGCTAC+TGG 0.483298 8_3:+24765956 Msa1283240:CDS
GTTGCTGCAGACTCATCGTT+TGG 0.485294 8_3:+24762957 Msa1283240:five_prime_UTR
AATTTGATCTAGCATTTGGT+GGG 0.487552 8_3:-24766367 None:intergenic
TGCTAGACCTCAATCAATGC+GGG 0.487955 8_3:+24762434 Msa1283240:five_prime_UTR
GTGTCCTGGGTGCCCAAGAT+TGG 0.489927 8_3:+24763622 Msa1283240:five_prime_UTR
CTCGTAGTGTTGAGCCTGGA+TGG 0.491528 8_3:+24763240 Msa1283240:five_prime_UTR
TTCAAGTGCTTAGTTTACTT+GGG 0.491962 8_3:+24766926 Msa1283240:three_prime_UTR
TAACTCTGCTTAGTGAAAAG+TGG 0.493614 8_3:+24766625 Msa1283240:three_prime_UTR
GCAGAAAACTCTTCCTCAGA+TGG 0.496981 8_3:-24761010 None:intergenic
ATGATGAATATCTTGAGTAC+AGG 0.497587 8_3:+24761212 Msa1283240:five_prime_UTR
AAATATCTCCAGAGATAGAA+TGG 0.498899 8_3:+24766670 Msa1283240:three_prime_UTR
ACCGACCACTACTCTGTCTC+AGG 0.501890 8_3:-24766767 None:intergenic
ACGGACTATTGGTACCTTGA+AGG 0.502644 8_3:+24761180 Msa1283240:five_prime_UTR
CCACTTGATAGAGATGCTAT+TGG 0.502938 8_3:+24762567 Msa1283240:five_prime_UTR
CAAAAGGTCTACTCATGAGC+TGG 0.506029 8_3:+24762779 Msa1283240:five_prime_UTR
TGGAATGCCGAGATATATCA+TGG 0.508860 8_3:-24762646 None:intergenic
AGAAAGATCTAACCAATCTT+GGG 0.512121 8_3:-24763634 None:intergenic
TCTTTCCAGAATGTGAAAGA+AGG 0.512792 8_3:+24766006 Msa1283240:CDS
TGCTCGCAACTTTGGCAAAG+AGG 0.516651 8_3:-24766104 None:intergenic
TCCCGACTCTGCGGTCACCT+TGG 0.517806 8_3:+24766068 Msa1283240:CDS
GTCCAAGGTGACCGCAGAGT+CGG 0.519116 8_3:-24766070 None:intergenic
GGCTTTCAGTTTAACATGGT+AGG 0.519261 8_3:-24765866 None:intergenic
GAGCGCTGCAAAGAGTAGAT+TGG 0.520110 8_3:+24765914 Msa1283240:CDS
GTTTGGATCCCTAAGATGAA+AGG 0.520145 8_3:-24762888 None:intergenic
AGAATGGCAGCTGCAACAAA+TGG 0.522227 8_3:+24762911 Msa1283240:five_prime_UTR
TTGTTGTGTATAAGAAGAAT+CGG 0.524032 8_3:+24766541 Msa1283240:CDS
CAGAATGAAAATTCAGATCC+CGG 0.524168 8_3:-24766162 None:intergenic
TTTGGATCCCTAAGATGAAA+GGG 0.526445 8_3:-24762887 None:intergenic
TGGGAAAATATATATTTCCA+TGG 0.526793 8_3:+24766945 Msa1283240:three_prime_UTR
AGCTGGGCATGATTATCAAA+AGG 0.527348 8_3:+24762763 Msa1283240:five_prime_UTR
CATTCCAGAAGAGAATATCT+TGG 0.527524 8_3:+24762662 Msa1283240:five_prime_UTR
AACAATGAGAAATTTGCCAC+TGG 0.529261 8_3:+24765813 Msa1283240:CDS
ACACACATAGTTTGGAATCC+GGG 0.531408 8_3:+24766144 Msa1283240:CDS
GATTGTTCTTGGTCATTGCA+TGG 0.531766 8_3:+24766186 Msa1283240:CDS
TGGCTATAGTTGAATCAGTA+AGG 0.538967 8_3:+24760969 Msa1283240:five_prime_UTR
TCCTCAGATGGGTCTTGCAA+AGG 0.541517 8_3:-24760998 None:intergenic
GATAGAGATGCTATTGGCCC+AGG 0.541655 8_3:+24762573 Msa1283240:five_prime_UTR
GATCACCTAGAAGTATTGTC+AGG 0.542634 8_3:-24766741 None:intergenic
GAGGCTTCCTGGCTTGCCAG+TGG 0.542762 8_3:-24765829 None:intergenic
CCTTGATGACATGCTTGCAA+AGG 0.543568 8_3:-24766212 None:intergenic
CAAATGTGTTGTGTCCGACT+CGG 0.550658 8_3:+24761134 Msa1283240:five_prime_UTR
GTACAACCCCGCATTGATTG+AGG 0.553008 8_3:-24762441 None:intergenic
ATCAAGCTAGCATCCGCATG+TGG 0.554926 8_3:+24762811 Msa1283240:five_prime_UTR
CGAGCTCGTAGTGTTGAGCC+TGG 0.555154 8_3:+24763236 Msa1283240:five_prime_UTR
GTTATATTGCTTCTACGTCA+TGG 0.555768 8_3:+24766028 Msa1283240:CDS
CGTGTAATGATCCATGCGAC+AGG 0.557827 8_3:-24763164 None:intergenic
TTTAGGCTAGCATGTGATTG+TGG 0.557889 8_3:-24766844 None:intergenic
TTCTTTGAAACCCATTTCAG+AGG 0.558546 8_3:-24766447 None:intergenic
TCTCAGTATGTTCACAAGCT+GGG 0.558885 8_3:+24762747 Msa1283240:five_prime_UTR
AACATGCACTTCCTGTCGCA+TGG 0.559400 8_3:+24763153 Msa1283240:five_prime_UTR
CGCCATAGTGAAAATAGGAC+AGG 0.560352 8_3:-24763415 None:intergenic
GGCCCAGAAAATTATGGGGA+GGG 0.561467 8_3:+24762360 Msa1283240:five_prime_UTR
CCTTTGCAAGCATGTCATCA+AGG 0.563826 8_3:+24766212 Msa1283240:CDS
GCTGAACAAAACATATGGAC+CGG 0.563942 8_3:-24766711 None:intergenic
AAAACCATACAATCACAAAA+GGG 0.569176 8_3:+24760699 Msa1283240:five_prime_UTR
CAGAAAACTCTTCCTCAGAT+GGG 0.571289 8_3:-24761009 None:intergenic
ACAATGTCCATGATATATCT+CGG 0.572446 8_3:+24762639 Msa1283240:five_prime_UTR
CATCTCTATCAAGTGGTCCA+TGG 0.572546 8_3:-24762560 None:intergenic
CAGGCTCAACACTACGAGCT+CGG 0.574462 8_3:-24763235 None:intergenic
ATATCGAGAGAGGAAGGAAA+CGG 0.578403 8_3:+24761161 Msa1283240:five_prime_UTR
AGTTGACGATTCGTTTGCGT+TGG 0.578440 8_3:+24766326 Msa1283240:CDS
TCTTGGAGAAACATATCGAA+GGG 0.580818 8_3:+24762679 Msa1283240:five_prime_UTR
AAGTAAACTAAGCACTTGAA+AGG 0.581140 8_3:-24766923 None:intergenic
GAAGGGATTGAGCGATATTG+TGG 0.582808 8_3:+24762696 Msa1283240:five_prime_UTR
AGTCGGGAATTTCAAGTGCT+CGG 0.584068 8_3:-24766053 None:intergenic
AGGACTTCAAATTAGAACAA+TGG 0.585586 8_3:-24766903 None:intergenic
AATCCACTGACTTTCCATCC+AGG 0.586823 8_3:-24763254 None:intergenic
TCAAATTAGAACAATGGAGA+TGG 0.591593 8_3:-24766897 None:intergenic
TATATAATAAGTGCAAGTGA+TGG 0.591768 8_3:-24762498 None:intergenic
ATCCAGCATAAGTTGTTCCA+AGG 0.593556 8_3:-24763563 None:intergenic
TATGGCGTATTCGTAGATCA+TGG 0.594029 8_3:+24763431 Msa1283240:five_prime_UTR
CACTTATTATATACAATGAG+AGG 0.595812 8_3:+24762508 Msa1283240:five_prime_UTR
ACGTTTGACAACAAAATGAC+AGG 0.597239 8_3:-24762463 None:intergenic
TCTTAGGGATCCAAACAGAA+TGG 0.598757 8_3:+24762895 Msa1283240:five_prime_UTR
ACAATTGTGTACAGCATTTG+GGG 0.598980 8_3:+24763520 Msa1283240:five_prime_UTR
CCAGAAAATTATGGGGAGGG+TGG 0.614713 8_3:+24762363 Msa1283240:five_prime_UTR
GTAGGCTTCTAATGCTCCAG+AGG 0.615309 8_3:-24765848 None:intergenic
TGGCCCAGAAAATTATGGGG+AGG 0.615544 8_3:+24762359 Msa1283240:five_prime_UTR
ATCTTGGAGAAACATATCGA+AGG 0.622305 8_3:+24762678 Msa1283240:five_prime_UTR
GGTTTCATATCGAGAGAGGA+AGG 0.627014 8_3:+24761155 Msa1283240:five_prime_UTR
TCGCAACTTTGGCAAAGAGG+CGG 0.628348 8_3:-24766101 None:intergenic
TTGAGTCGATATCTCCGACT+AGG 0.628609 8_3:-24762396 None:intergenic
TCCTTTGCAAGACCCATCTG+AGG 0.629277 8_3:+24760997 Msa1283240:five_prime_UTR
GTGGAGAGATACTACCTAGT+CGG 0.629327 8_3:+24762382 Msa1283240:five_prime_UTR
CTAACCAATCTTGGGCACCC+AGG 0.630205 8_3:-24763626 None:intergenic
TTCGTGTTACGGTTACCAGA+AGG 0.630622 8_3:-24766513 None:intergenic
CATGGCTAAGGAATATTGTG+AGG 0.632897 8_3:+24763449 Msa1283240:five_prime_UTR
GTATTCGTAGATCATGGCTA+AGG 0.636241 8_3:+24763437 Msa1283240:five_prime_UTR
GTTTGGCTTTCAGTTTAACA+TGG 0.637960 8_3:-24765870 None:intergenic
CCAATAGCATCTCTATCAAG+TGG 0.639002 8_3:-24762567 None:intergenic
TATTTCGTTCAACCCACATG+CGG 0.641485 8_3:-24762824 None:intergenic
CTCTCGATATGAAACCGAGT+CGG 0.654226 8_3:-24761148 None:intergenic
ACTCGGTTTCATATCGAGAG+AGG 0.656336 8_3:+24761151 Msa1283240:five_prime_UTR
TCCTGAGACAGAGTAGTGGT+CGG 0.666617 8_3:+24766766 Msa1283240:three_prime_UTR
TCAAGCTAGCATCCGCATGT+GGG 0.671175 8_3:+24762812 Msa1283240:five_prime_UTR
TGTATAAGAAGAATCGGAGG+CGG 0.671482 8_3:+24766547 Msa1283240:CDS
CTGCTAGACCTCAATCAATG+CGG 0.672333 8_3:+24762433 Msa1283240:five_prime_UTR
ATTTGGCCCAGAAAATTATG+GGG 0.674830 8_3:+24762356 Msa1283240:five_prime_UTR
GAGGAAATGCAATAATATCG+AGG 0.676192 8_3:+24763468 Msa1283240:five_prime_UTR
GAATTCTGAACATTATGATG+AGG 0.676766 8_3:+24761060 Msa1283240:five_prime_UTR
TGTGAACATACTGAGAAGCA+AGG 0.684133 8_3:-24762740 None:intergenic
ACTTGAAATTCCCGACTCTG+CGG 0.684327 8_3:+24766059 Msa1283240:CDS
GCTAGACCTCAATCAATGCG+GGG 0.688131 8_3:+24762435 Msa1283240:five_prime_UTR
GAGCCTGGATGGAAAGTCAG+TGG 0.689150 8_3:+24763251 Msa1283240:five_prime_UTR
ATTGTGTACAGCATTTGGGG+AGG 0.694956 8_3:+24763523 Msa1283240:five_prime_UTR
TTGTGTATAAGAAGAATCGG+AGG 0.709540 8_3:+24766544 Msa1283240:CDS
TATCTCCAGAGATAGAATGG+AGG 0.713703 8_3:+24766673 Msa1283240:three_prime_UTR
AAAACAAGTAGAGTGAACAA+GGG 0.720099 8_3:-24763119 None:intergenic
TCACTCCTGAGACAGAGTAG+TGG 0.728848 8_3:+24766762 Msa1283240:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATGTTATTTTTTATTTC+AGG + chr8_3:24760870-24760889 Msa1283240:intron 10.0%
!!! AAATGTTATTTTTTATTTCA+GGG + chr8_3:24760871-24760890 Msa1283240:intron 10.0%
!! AATTAGTTAGATTAAAAATA+AGG + chr8_3:24764064-24764083 Msa1283240:intron 10.0%
!! ATTAGTTAGATTAAAAATAA+GGG + chr8_3:24764065-24764084 Msa1283240:intron 10.0%
!! AAAAAAATAATAAATGTCTA+GGG + chr8_3:24764594-24764613 Msa1283240:intron 10.0%
!!! AGATATATTATTATTTTAAG+GGG - chr8_3:24764695-24764714 None:intergenic 10.0%
!! TTTATAGTAATATATTAATG+AGG + chr8_3:24764743-24764762 Msa1283240:intron 10.0%
!!! AATGATCATTTTTATAATAA+TGG + chr8_3:24764766-24764785 Msa1283240:intron 10.0%
!! AGTGTTAATATTAATAATAA+AGG + chr8_3:24765116-24765135 Msa1283240:intron 10.0%
!! AAAAAAAGTTATATTACTAT+AGG - chr8_3:24765578-24765597 None:intergenic 10.0%
!!! TTTTAACTATTTATCTCAAA+AGG + chr8_3:24760839-24760858 Msa1283240:intron 15.0%
!! TTTAACTATTTATCTCAAAA+GGG + chr8_3:24760840-24760859 Msa1283240:intron 15.0%
!! TTTCAAATTTCAGAAATTAT+TGG - chr8_3:24760917-24760936 None:intergenic 15.0%
!!! ATAAGACAAAAATTTTAACA+AGG - chr8_3:24761954-24761973 None:intergenic 15.0%
!!! TTGTTAAAATTTTTGTCTTA+TGG + chr8_3:24761953-24761972 Msa1283240:intron 15.0%
!! TGAATTTCATTACATATATA+TGG - chr8_3:24762612-24762631 None:intergenic 15.0%
!! GAAAAAAATAATAAATGTCT+AGG + chr8_3:24764593-24764612 Msa1283240:intron 15.0%
!! AAAAAATAATAAATGTCTAG+GGG + chr8_3:24764595-24764614 Msa1283240:intron 15.0%
!! AATATTAATAATAAAGGTGA+AGG + chr8_3:24765122-24765141 Msa1283240:intron 15.0%
!!! AGTTTTTTATTAATGTATCA+AGG + chr8_3:24765602-24765621 Msa1283240:intron 15.0%
!! TTAAAATTCAAGATACAATA+AGG - chr8_3:24765634-24765653 None:intergenic 15.0%
!! GATTCAATAAATGAATATTT+AGG - chr8_3:24766864-24766883 None:intergenic 15.0%
!! TATGTACATATAAAATTTGT+TGG + chr8_3:24767021-24767040 Msa1283240:three_prime_UTR 15.0%
!!! TTCTGAAATTTGAAAAAGTT+TGG + chr8_3:24760922-24760941 Msa1283240:five_prime_UTR 20.0%
!!! ATTTGAAAAAGTTTGGTTTT+TGG + chr8_3:24760929-24760948 Msa1283240:five_prime_UTR 20.0%
!! TCATAATAACTTAGAGTAAA+GGG - chr8_3:24761270-24761289 None:intergenic 20.0%
!! ATCATAATAACTTAGAGTAA+AGG - chr8_3:24761271-24761290 None:intergenic 20.0%
!!! ATGATCAAGTTTTACTTTTT+TGG + chr8_3:24761286-24761305 Msa1283240:intron 20.0%
!! AAGAATCAAAATTTCTACAA+GGG - chr8_3:24761456-24761475 None:intergenic 20.0%
!!! AATTTTGATTCTTGTTAACT+CGG + chr8_3:24761463-24761482 Msa1283240:intron 20.0%
!!! GTTTCTCTTATAAATTTTCT+AGG - chr8_3:24761588-24761607 None:intergenic 20.0%
!! TGATATATGATAGAACATTA+TGG + chr8_3:24761649-24761668 Msa1283240:intron 20.0%
!!! CAAGGATATAATTTTCTAAA+CGG - chr8_3:24761936-24761955 None:intergenic 20.0%
!!! ACATATATATGGAATCTTTT+TGG - chr8_3:24762601-24762620 None:intergenic 20.0%
!!! AAAATCTGTATTTTTTCATC+AGG + chr8_3:24762848-24762867 Msa1283240:five_prime_UTR 20.0%
!!! TTATTTCTTTAAAATGCGTT+TGG + chr8_3:24763325-24763344 Msa1283240:intron 20.0%
!! AATTATCAGACTATCAATAT+CGG + chr8_3:24763739-24763758 Msa1283240:intron 20.0%
!!! AAAATAGTTCTGATATTTCT+AGG - chr8_3:24763800-24763819 None:intergenic 20.0%
!! ATTGAAAACACAAAAACTAT+CGG + chr8_3:24763822-24763841 Msa1283240:intron 20.0%
!! AAAAATAATAAATGTCTAGG+GGG + chr8_3:24764596-24764615 Msa1283240:intron 20.0%
!!! GATCATTTTTATAATAATGG+TGG + chr8_3:24764769-24764788 Msa1283240:intron 20.0%
!!! TTATAATAATGGTGGATTAT+AGG + chr8_3:24764777-24764796 Msa1283240:intron 20.0%
!!! TATAATAATGGTGGATTATA+GGG + chr8_3:24764778-24764797 Msa1283240:intron 20.0%
!!! GAAACATTGATTAAATCTAA+TGG - chr8_3:24764850-24764869 None:intergenic 20.0%
!! AAGTAATGAAGAATTGATTA+GGG - chr8_3:24764990-24765009 None:intergenic 20.0%
!! ATTAAATCAAATTCAGATAG+TGG + chr8_3:24765052-24765071 Msa1283240:intron 20.0%
!! ACAAAAAAAAAAAATGCTGA+CGG + chr8_3:24765255-24765274 Msa1283240:intron 20.0%
!!! TTTTAATGAATCTCAATCAT+TGG + chr8_3:24765482-24765501 Msa1283240:intron 20.0%
!! AAAAGTTATATTACTATAGG+TGG - chr8_3:24765575-24765594 None:intergenic 20.0%
!! CTGAATAATTCAACTAATAT+TGG + chr8_3:24766405-24766424 Msa1283240:CDS 20.0%
!! TATCATATGTTGAAACATAA+TGG - chr8_3:24766607-24766626 None:intergenic 20.0%
!! AAACAAAAATAAATGATCCA+TGG - chr8_3:24766965-24766984 None:intergenic 20.0%
!!! GATCATTTATTTTTGTTTTC+TGG + chr8_3:24766967-24766986 Msa1283240:three_prime_UTR 20.0%
! AAAACCATACAATCACAAAA+GGG + chr8_3:24760699-24760718 Msa1283240:five_prime_UTR 25.0%
!!! TGTGTTTTTTCCACAATTTT+TGG + chr8_3:24760761-24760780 Msa1283240:intron 25.0%
! GTAATTCAATCCAAAAATTG+TGG - chr8_3:24760774-24760793 None:intergenic 25.0%
! AACTCTATCATAAGGAATAA+GGG - chr8_3:24761089-24761108 None:intergenic 25.0%
!!! AGAGTTGATGCTTTTATAAT+TGG + chr8_3:24761103-24761122 Msa1283240:five_prime_UTR 25.0%
!!! GAGTTGATGCTTTTATAATT+GGG + chr8_3:24761104-24761123 Msa1283240:five_prime_UTR 25.0%
!!! AGTTGATGCTTTTATAATTG+GGG + chr8_3:24761105-24761124 Msa1283240:five_prime_UTR 25.0%
! TATGGTAGAACATTAGAATT+TGG + chr8_3:24761379-24761398 Msa1283240:intron 25.0%
! CAAGAATCAAAATTTCTACA+AGG - chr8_3:24761457-24761476 None:intergenic 25.0%
! TACCAACATGAAAAACATTA+GGG - chr8_3:24761753-24761772 None:intergenic 25.0%
! TTACCAACATGAAAAACATT+AGG - chr8_3:24761754-24761773 None:intergenic 25.0%
! TCAGGATAACAAAAGAAAAA+TGG - chr8_3:24762002-24762021 None:intergenic 25.0%
! AACAATGACAACATAACTAT+TGG - chr8_3:24762078-24762097 None:intergenic 25.0%
! TATATAATAAGTGCAAGTGA+TGG - chr8_3:24762501-24762520 None:intergenic 25.0%
! CACTTATTATATACAATGAG+AGG + chr8_3:24762508-24762527 Msa1283240:five_prime_UTR 25.0%
! AATATTCCAAGAAATCAGTT+TGG - chr8_3:24763597-24763616 None:intergenic 25.0%
! AAACATACATGTTTGGATTA+AGG + chr8_3:24763681-24763700 Msa1283240:intron 25.0%
!! TTTTACATCTGGAGAAAAAA+TGG - chr8_3:24764423-24764442 None:intergenic 25.0%
!! AATTGCAACAATTTTACATC+TGG - chr8_3:24764434-24764453 None:intergenic 25.0%
!!! TTCCCAATATTTTAGATTGT+GGG + chr8_3:24764456-24764475 Msa1283240:intron 25.0%
! TCTGTTAACGTAATAGTATT+AGG + chr8_3:24764518-24764537 Msa1283240:intron 25.0%
!!! AGTGCTTTTTAACAAATAGA+GGG + chr8_3:24764624-24764643 Msa1283240:intron 25.0%
! CAAGTAATGAAGAATTGATT+AGG - chr8_3:24764991-24765010 None:intergenic 25.0%
! TTAAATGTCTCATGTTCTAA+AGG - chr8_3:24765086-24765105 None:intergenic 25.0%
! GAAAATTCTCCAAAACAAAT+GGG - chr8_3:24765186-24765205 None:intergenic 25.0%
! TGAAAATTCTCCAAAACAAA+TGG - chr8_3:24765187-24765206 None:intergenic 25.0%
!!! TTTGTTTTGGAGAATTTTCA+TGG + chr8_3:24765187-24765206 Msa1283240:intron 25.0%
!!! TTGTTTTGGAGAATTTTCAT+GGG + chr8_3:24765188-24765207 Msa1283240:intron 25.0%
!! TCATTTTGCTTAAGAAGTTT+CGG + chr8_3:24765710-24765729 Msa1283240:intron 25.0%
! ATGTGAATCATCAAAAAGTT+TGG - chr8_3:24765890-24765909 None:intergenic 25.0%
!! ATGATTTGTGAAAATCTTCA+AGG + chr8_3:24766240-24766259 Msa1283240:CDS 25.0%
! TTTGAATTTGATCTAGCATT+TGG - chr8_3:24766374-24766393 None:intergenic 25.0%
! TTGTTGTGTATAAGAAGAAT+CGG + chr8_3:24766541-24766560 Msa1283240:CDS 25.0%
! TAAAAGCTGAACAAAACATA+TGG - chr8_3:24766719-24766738 None:intergenic 25.0%
! GAGAAAAATATGAAACACTA+AGG - chr8_3:24766817-24766836 None:intergenic 25.0%
! TGGGAAAATATATATTTCCA+TGG + chr8_3:24766945-24766964 Msa1283240:three_prime_UTR 25.0%
CAAAACCATACAATCACAAA+AGG + chr8_3:24760698-24760717 Msa1283240:five_prime_UTR 30.0%
! ACTTAACTTGGACTAAGTTT+GGG + chr8_3:24761038-24761057 Msa1283240:five_prime_UTR 30.0%
GAATTCTGAACATTATGATG+AGG + chr8_3:24761060-24761079 Msa1283240:five_prime_UTR 30.0%
CAACTCTATCATAAGGAATA+AGG - chr8_3:24761090-24761109 None:intergenic 30.0%
! AAAGCATCAACTCTATCATA+AGG - chr8_3:24761097-24761116 None:intergenic 30.0%
ATGATGAATATCTTGAGTAC+AGG + chr8_3:24761212-24761231 Msa1283240:five_prime_UTR 30.0%
!! TTGCGTGTTTAGTTTGTATA+TGG + chr8_3:24761361-24761380 Msa1283240:intron 30.0%
TATATAGAGAGAAGACATGT+AGG + chr8_3:24761501-24761520 Msa1283240:intron 30.0%
AGTAAGTAGATTAGATCAGA+TGG + chr8_3:24761530-24761549 Msa1283240:intron 30.0%
GTAAGTAGATTAGATCAGAT+GGG + chr8_3:24761531-24761550 Msa1283240:intron 30.0%
TAAGTAGATTAGATCAGATG+GGG + chr8_3:24761532-24761551 Msa1283240:intron 30.0%
TATAAGAGAAACCATCAAGA+AGG + chr8_3:24761596-24761615 Msa1283240:intron 30.0%
AAGAAGGATCAAGAGATTAA+TGG + chr8_3:24761612-24761631 Msa1283240:intron 30.0%
AGAAGGATCAAGAGATTAAT+GGG + chr8_3:24761613-24761632 Msa1283240:intron 30.0%
!! AAGAGATTAATGGGTTTGAT+AGG + chr8_3:24761622-24761641 Msa1283240:intron 30.0%
!! AGAGATTAATGGGTTTGATA+GGG + chr8_3:24761623-24761642 Msa1283240:intron 30.0%
! TTCCCTAATGTTTTTCATGT+TGG + chr8_3:24761748-24761767 Msa1283240:intron 30.0%
CTAATAACTTGAAGCTTAAG+TGG + chr8_3:24761836-24761855 Msa1283240:intron 30.0%
ATGCTATGGATTCTAAATTC+AGG - chr8_3:24762020-24762039 None:intergenic 30.0%
ACTAATTCACTAGTATGCTA+TGG - chr8_3:24762034-24762053 None:intergenic 30.0%
TTAGTAGTCAGAAATCTGTT+AGG + chr8_3:24762131-24762150 Msa1283240:intron 30.0%
AGAACATGATTGTATTCATG+AGG - chr8_3:24762246-24762265 None:intergenic 30.0%
TTCAACATGACTAGAAATCT+GGG - chr8_3:24762305-24762324 None:intergenic 30.0%
ATTCAACATGACTAGAAATC+TGG - chr8_3:24762306-24762325 None:intergenic 30.0%
ACAATGTCCATGATATATCT+CGG + chr8_3:24762639-24762658 Msa1283240:five_prime_UTR 30.0%
CAGATAACTATGATTCTCTT+AGG - chr8_3:24763038-24763057 None:intergenic 30.0%
ACATGAAAAGATAACCAAGT+CGG - chr8_3:24763090-24763109 None:intergenic 30.0%
! ACTTGGTTATCTTTTCATGT+TGG + chr8_3:24763090-24763109 Msa1283240:intron 30.0%
AAAACAAGTAGAGTGAACAA+GGG - chr8_3:24763122-24763141 None:intergenic 30.0%
AAAAACAAGTAGAGTGAACA+AGG - chr8_3:24763123-24763142 None:intergenic 30.0%
! CAGCTGATATTAATCTTTTG+AGG + chr8_3:24763294-24763313 Msa1283240:five_prime_UTR 30.0%
AGAAAGATCTAACCAATCTT+GGG - chr8_3:24763637-24763656 None:intergenic 30.0%
GCACATAAAACATACATGTT+TGG + chr8_3:24763674-24763693 Msa1283240:intron 30.0%
! ATTCACCTATTTTCTGTATC+CGG - chr8_3:24763722-24763741 None:intergenic 30.0%
TATCGGATATAGATACTTCT+AGG + chr8_3:24763756-24763775 Msa1283240:intron 30.0%
ATACCTTTGAATAAACCTCA+GGG - chr8_3:24764108-24764127 None:intergenic 30.0%
CAAAGGATGAATACAAAAGA+AGG - chr8_3:24764392-24764411 None:intergenic 30.0%
! CTTCTTTTGTATTCATCCTT+TGG + chr8_3:24764390-24764409 Msa1283240:intron 30.0%
AAAAAATGGCTGAATACCAA+AGG - chr8_3:24764409-24764428 None:intergenic 30.0%
!! CTTCCCAATATTTTAGATTG+TGG + chr8_3:24764455-24764474 Msa1283240:intron 30.0%
! AGCCCACAATCTAAAATATT+GGG - chr8_3:24764461-24764480 None:intergenic 30.0%
!! TCCAACCTTTTAAGTAAGAA+AGG + chr8_3:24764480-24764499 Msa1283240:intron 30.0%
TCCTTTCTTACTTAAAAGGT+TGG - chr8_3:24764484-24764503 None:intergenic 30.0%
TGTCTCCTTTCTTACTTAAA+AGG - chr8_3:24764488-24764507 None:intergenic 30.0%
GTTAACGTAATAGTATTAGG+CGG + chr8_3:24764521-24764540 Msa1283240:intron 30.0%
!! CAGTGCTTTTTAACAAATAG+AGG + chr8_3:24764623-24764642 Msa1283240:intron 30.0%
!! GTGCTTTTTAACAAATAGAG+GGG + chr8_3:24764625-24764644 Msa1283240:intron 30.0%
!! TGCTTTTTAACAAATAGAGG+GGG + chr8_3:24764626-24764645 Msa1283240:intron 30.0%
GATTAGATTGTGAATGAGAA+AGG - chr8_3:24764928-24764947 None:intergenic 30.0%
! AGGTTATTGCTCTCATTTTA+TGG + chr8_3:24765142-24765161 Msa1283240:intron 30.0%
!!! TGTTTTGGAGAATTTTCATG+GGG + chr8_3:24765189-24765208 Msa1283240:intron 30.0%
! GTTCGAAATTTTGTGAAGTT+TGG + chr8_3:24765307-24765326 Msa1283240:intron 30.0%
TAATTCATCATCATCCATAG+AGG - chr8_3:24765352-24765371 None:intergenic 30.0%
AAAACCCATAAGAGCAAATT+AGG - chr8_3:24765405-24765424 None:intergenic 30.0%
!! AATTTGCTCTTATGGGTTTT+TGG + chr8_3:24765405-24765424 Msa1283240:intron 30.0%
TTATTAATGTATCAAGGCCT+TGG + chr8_3:24765608-24765627 Msa1283240:intron 30.0%
TTCTTAAGCAAAATGAAACC+AGG - chr8_3:24765706-24765725 None:intergenic 30.0%
!! CTTTTTGATGATTCACATCT+CGG + chr8_3:24765892-24765911 Msa1283240:CDS 30.0%
TATAACCTTCTTTCACATTC+TGG - chr8_3:24766014-24766033 None:intergenic 30.0%
TTTCATTCTGTGATTGTTCT+TGG + chr8_3:24766175-24766194 Msa1283240:CDS 30.0%
!! AAGAGGTTTTAATGGATCTA+TGG + chr8_3:24766295-24766314 Msa1283240:CDS 30.0%
!! AGAGGTTTTAATGGATCTAT+GGG + chr8_3:24766296-24766315 Msa1283240:CDS 30.0%
AATTTGATCTAGCATTTGGT+GGG - chr8_3:24766370-24766389 None:intergenic 30.0%
! TAAACAATATGCCTCTGAAA+TGG + chr8_3:24766436-24766455 Msa1283240:CDS 30.0%
!! AAACAATATGCCTCTGAAAT+GGG + chr8_3:24766437-24766456 Msa1283240:CDS 30.0%
AAATATCTCCAGAGATAGAA+TGG + chr8_3:24766670-24766689 Msa1283240:three_prime_UTR 30.0%
TTATACCTGACAATACTTCT+AGG + chr8_3:24766736-24766755 Msa1283240:three_prime_UTR 30.0%
TCAAATTAGAACAATGGAGA+TGG - chr8_3:24766900-24766919 None:intergenic 30.0%
AGGACTTCAAATTAGAACAA+TGG - chr8_3:24766906-24766925 None:intergenic 30.0%
AAGTAAACTAAGCACTTGAA+AGG - chr8_3:24766926-24766945 None:intergenic 30.0%
! TTTCAAGTGCTTAGTTTACT+TGG + chr8_3:24766925-24766944 Msa1283240:three_prime_UTR 30.0%
TTCAAGTGCTTAGTTTACTT+GGG + chr8_3:24766926-24766945 Msa1283240:three_prime_UTR 30.0%
!! TGCAATGAAGGAATTTTTGG+TGG - chr8_3:24760666-24760685 None:intergenic 35.0%
! CATACCCTTTTGTGATTGTA+TGG - chr8_3:24760706-24760725 None:intergenic 35.0%
!!! GGTTTTTGGTTGAACCTTTA+TGG + chr8_3:24760943-24760962 Msa1283240:five_prime_UTR 35.0%
AACTATAGCCATCTCCATAA+AGG - chr8_3:24760960-24760979 None:intergenic 35.0%
TGGCTATAGTTGAATCAGTA+AGG + chr8_3:24760969-24760988 Msa1283240:five_prime_UTR 35.0%
! GACTTAACTTGGACTAAGTT+TGG + chr8_3:24761037-24761056 Msa1283240:five_prime_UTR 35.0%
ATCATCCTTATACTCCTTCA+AGG - chr8_3:24761197-24761216 None:intergenic 35.0%
TTCTACAAGGGTAAGTAACA+AGG - chr8_3:24761444-24761463 None:intergenic 35.0%
AATCTCTTGATCCTTCTTGA+TGG - chr8_3:24761610-24761629 None:intergenic 35.0%
TTCAGACAGCAAAAGGAAAA+TGG - chr8_3:24761784-24761803 None:intergenic 35.0%
TTGAAACTTCAGACAGCAAA+AGG - chr8_3:24761791-24761810 None:intergenic 35.0%
CAACATGATAAGACAAGCAT+TGG - chr8_3:24761882-24761901 None:intergenic 35.0%
ATTAGTAATACGCACACGAT+CGG + chr8_3:24762048-24762067 Msa1283240:intron 35.0%
TCATGAGGTAAAAGCTCATT+AGG - chr8_3:24762231-24762250 None:intergenic 35.0%
! CTCTCTCATGAGTATCATTT+TGG + chr8_3:24762270-24762289 Msa1283240:intron 35.0%
! ACTAGAAATCTGGGATGATA+GGG - chr8_3:24762296-24762315 None:intergenic 35.0%
! GAATTTTGTTCTCTGTCTGA+AGG + chr8_3:24762322-24762341 Msa1283240:intron 35.0%
TCATTTGGCCCAGAAAATTA+TGG + chr8_3:24762354-24762373 Msa1283240:five_prime_UTR 35.0%
CATTTGGCCCAGAAAATTAT+GGG + chr8_3:24762355-24762374 Msa1283240:five_prime_UTR 35.0%
ATTTGGCCCAGAAAATTATG+GGG + chr8_3:24762356-24762375 Msa1283240:five_prime_UTR 35.0%
ACGTTTGACAACAAAATGAC+AGG - chr8_3:24762466-24762485 None:intergenic 35.0%
CATTCCAGAAGAGAATATCT+TGG + chr8_3:24762662-24762681 Msa1283240:five_prime_UTR 35.0%
TTCTCCAAGATATTCTCTTC+TGG - chr8_3:24762669-24762688 None:intergenic 35.0%
ATCTTGGAGAAACATATCGA+AGG + chr8_3:24762678-24762697 Msa1283240:five_prime_UTR 35.0%
TCTTGGAGAAACATATCGAA+GGG + chr8_3:24762679-24762698 Msa1283240:five_prime_UTR 35.0%
TTTGGATCCCTAAGATGAAA+GGG - chr8_3:24762890-24762909 None:intergenic 35.0%
! TATTTTCAATCAACCCGACT+TGG + chr8_3:24763073-24763092 Msa1283240:intron 35.0%
CATGAAAAGATAACCAAGTC+GGG - chr8_3:24763089-24763108 None:intergenic 35.0%
TTAAGCCATTTAGACACATC+AGG - chr8_3:24763203-24763222 None:intergenic 35.0%
CTGTAAAAGCAAACAACGAA+AGG - chr8_3:24763379-24763398 None:intergenic 35.0%
GAATACGCCATAGTGAAAAT+AGG - chr8_3:24763423-24763442 None:intergenic 35.0%
GAGGAAATGCAATAATATCG+AGG + chr8_3:24763468-24763487 Msa1283240:five_prime_UTR 35.0%
GACAATTGTGTACAGCATTT+GGG + chr8_3:24763519-24763538 Msa1283240:five_prime_UTR 35.0%
ACAATTGTGTACAGCATTTG+GGG + chr8_3:24763520-24763539 Msa1283240:five_prime_UTR 35.0%
! TGTTGACCAAACTGATTTCT+TGG + chr8_3:24763588-24763607 Msa1283240:five_prime_UTR 35.0%
GAGAAAGATCTAACCAATCT+TGG - chr8_3:24763638-24763657 None:intergenic 35.0%
! TTCACCTATTTTCTGTATCC+GGG - chr8_3:24763721-24763740 None:intergenic 35.0%
!! AGATACTTCTAGGATATGCT+TGG + chr8_3:24763766-24763785 Msa1283240:intron 35.0%
ACTTCAATGGGTCTCATAAT+AGG + chr8_3:24763950-24763969 Msa1283240:intron 35.0%
TACCTTTGAATAAACCTCAG+GGG - chr8_3:24764107-24764126 None:intergenic 35.0%
GATACCTTTGAATAAACCTC+AGG - chr8_3:24764109-24764128 None:intergenic 35.0%
! AAGGTATCACACTGTTAACA+TGG + chr8_3:24764121-24764140 Msa1283240:intron 35.0%
ATTTGAATGGGTCTTGATGA+CGG - chr8_3:24764187-24764206 None:intergenic 35.0%
!! GATGGGTTATGGATTTGAAT+GGG - chr8_3:24764199-24764218 None:intergenic 35.0%
CTTTCACATACAGTGACTAT+TGG - chr8_3:24764243-24764262 None:intergenic 35.0%
ATTTCCCACAAACCTACAAA+CGG + chr8_3:24764341-24764360 Msa1283240:intron 35.0%
! GAGCCCACAATCTAAAATAT+TGG - chr8_3:24764462-24764481 None:intergenic 35.0%
AATAATAAATGTCTAGGGGG+AGG + chr8_3:24764599-24764618 Msa1283240:intron 35.0%
ATACATTTGAACAGACCTCA+GGG + chr8_3:24764653-24764672 Msa1283240:intron 35.0%
GTGAATCAAAAACATCTCAG+AGG - chr8_3:24764964-24764983 None:intergenic 35.0%
! TTTATGCGTCCCATTTGTTT+TGG + chr8_3:24765174-24765193 Msa1283240:intron 35.0%
!!! GTTTTGGAGAATTTTCATGG+GGG + chr8_3:24765190-24765209 Msa1283240:intron 35.0%
AATGCTGACGGTTATATCTA+TGG + chr8_3:24765267-24765286 Msa1283240:intron 35.0%
AAAATCTTCCAACTCCTCTA+TGG + chr8_3:24765335-24765354 Msa1283240:intron 35.0%
CATAAGAGCAAATTAGGCAT+CGG - chr8_3:24765399-24765418 None:intergenic 35.0%
!! GATGCCTAATTTGCTCTTAT+GGG + chr8_3:24765398-24765417 Msa1283240:intron 35.0%
CAATCATTGGTCAAATCTGA+TGG + chr8_3:24765495-24765514 Msa1283240:intron 35.0%
ATTACTATAGGTGGATCACA+TGG - chr8_3:24765566-24765585 None:intergenic 35.0%
TTCAAGATACAATAAGGCCA+AGG - chr8_3:24765628-24765647 None:intergenic 35.0%
AACAATGAGAAATTTGCCAC+TGG + chr8_3:24765813-24765832 Msa1283240:CDS 35.0%
!! GTTTGGCTTTCAGTTTAACA+TGG - chr8_3:24765873-24765892 None:intergenic 35.0%
GCAACTCAGTTGTTAACTTA+TGG - chr8_3:24765945-24765964 None:intergenic 35.0%
TCTTTCCAGAATGTGAAAGA+AGG + chr8_3:24766006-24766025 Msa1283240:CDS 35.0%
GTTATATTGCTTCTACGTCA+TGG + chr8_3:24766028-24766047 Msa1283240:CDS 35.0%
! AACACACATAGTTTGGAATC+CGG + chr8_3:24766143-24766162 Msa1283240:CDS 35.0%
CAGAATGAAAATTCAGATCC+CGG - chr8_3:24766165-24766184 None:intergenic 35.0%
! GTCAATCGTCAATGTCTTTT+CGG + chr8_3:24766265-24766284 Msa1283240:CDS 35.0%
!! GTCGTTTGAAGAGGTTTTAA+TGG + chr8_3:24766287-24766306 Msa1283240:CDS 35.0%
!! GAGGTTTTAATGGATCTATG+GGG + chr8_3:24766297-24766316 Msa1283240:CDS 35.0%
GAATTTGATCTAGCATTTGG+TGG - chr8_3:24766371-24766390 None:intergenic 35.0%
!! TTCTTTGAAACCCATTTCAG+AGG - chr8_3:24766450-24766469 None:intergenic 35.0%
AAGAAACGCAGAACCAATAT+TGG + chr8_3:24766465-24766484 Msa1283240:CDS 35.0%
TGAAGATCGTTTGCCAATAT+TGG - chr8_3:24766481-24766500 None:intergenic 35.0%
TGGCAAACGATCTTCAATTT+CGG + chr8_3:24766485-24766504 Msa1283240:CDS 35.0%
! CAACAACACTTTTCGTGTTA+CGG - chr8_3:24766527-24766546 None:intergenic 35.0%
TTGTGTATAAGAAGAATCGG+AGG + chr8_3:24766544-24766563 Msa1283240:CDS 35.0%
TAACTCTGCTTAGTGAAAAG+TGG + chr8_3:24766625-24766644 Msa1283240:three_prime_UTR 35.0%
GAGGAATCAAAAAGCAATTC+CGG + chr8_3:24766692-24766711 Msa1283240:three_prime_UTR 35.0%
!!! GAAGGAATTTTTGGTGGTGA+TGG - chr8_3:24760660-24760679 None:intergenic 40.0%
! CGCTGCAATGAAGGAATTTT+TGG - chr8_3:24760669-24760688 None:intergenic 40.0%
TGGTTGAACCTTTATGGAGA+TGG + chr8_3:24760949-24760968 Msa1283240:five_prime_UTR 40.0%
CAGAAAACTCTTCCTCAGAT+GGG - chr8_3:24761012-24761031 None:intergenic 40.0%
!! TTTCTGCTGCTGACTTAACT+TGG + chr8_3:24761026-24761045 Msa1283240:five_prime_UTR 40.0%
ATATCGAGAGAGGAAGGAAA+CGG + chr8_3:24761161-24761180 Msa1283240:five_prime_UTR 40.0%
! TGGTACCTTGAAGGAGTATA+AGG + chr8_3:24761189-24761208 Msa1283240:five_prime_UTR 40.0%
GATTCTTGTTAACTCGGCTT+AGG + chr8_3:24761469-24761488 Msa1283240:intron 40.0%
! TTAACTCGGCTTAGGTTGTT+TGG + chr8_3:24761477-24761496 Msa1283240:intron 40.0%
! TAACTCGGCTTAGGTTGTTT+GGG + chr8_3:24761478-24761497 Msa1283240:intron 40.0%
TTAGTAATACGCACACGATC+GGG + chr8_3:24762049-24762068 Msa1283240:intron 40.0%
GTCAGAAATCTGTTAGGAGT+TGG + chr8_3:24762137-24762156 Msa1283240:intron 40.0%
! GACTAGAAATCTGGGATGAT+AGG - chr8_3:24762297-24762316 None:intergenic 40.0%
CCAATAGCATCTCTATCAAG+TGG - chr8_3:24762570-24762589 None:intergenic 40.0%
CCACTTGATAGAGATGCTAT+TGG + chr8_3:24762567-24762586 Msa1283240:five_prime_UTR 40.0%
!! ATGGAATCTTTTTGGCACCT+GGG - chr8_3:24762593-24762612 None:intergenic 40.0%
!! TATGGAATCTTTTTGGCACC+TGG - chr8_3:24762594-24762613 None:intergenic 40.0%
TGGAATGCCGAGATATATCA+TGG - chr8_3:24762649-24762668 None:intergenic 40.0%
!! AGGCTATTGACTTGTGCATT+TGG - chr8_3:24762723-24762742 None:intergenic 40.0%
TGTGAACATACTGAGAAGCA+AGG - chr8_3:24762743-24762762 None:intergenic 40.0%
TTCTCAGTATGTTCACAAGC+TGG + chr8_3:24762746-24762765 Msa1283240:five_prime_UTR 40.0%
TCTCAGTATGTTCACAAGCT+GGG + chr8_3:24762747-24762766 Msa1283240:five_prime_UTR 40.0%
AGCTGGGCATGATTATCAAA+AGG + chr8_3:24762763-24762782 Msa1283240:five_prime_UTR 40.0%
TATTTCGTTCAACCCACATG+CGG - chr8_3:24762827-24762846 None:intergenic 40.0%
AGTCAGACCCTTTCATCTTA+GGG + chr8_3:24762880-24762899 Msa1283240:five_prime_UTR 40.0%
GTTTGGATCCCTAAGATGAA+AGG - chr8_3:24762891-24762910 None:intergenic 40.0%
TCTTAGGGATCCAAACAGAA+TGG + chr8_3:24762895-24762914 Msa1283240:five_prime_UTR 40.0%
! CTGCAACAAATGGTTCGTTT+TGG + chr8_3:24762921-24762940 Msa1283240:five_prime_UTR 40.0%
CAAAGCCTGATGTGTCTAAA+TGG + chr8_3:24763195-24763214 Msa1283240:five_prime_UTR 40.0%
! GTCCTGTCCTATTTTCACTA+TGG + chr8_3:24763413-24763432 Msa1283240:five_prime_UTR 40.0%
TATGGCGTATTCGTAGATCA+TGG + chr8_3:24763431-24763450 Msa1283240:five_prime_UTR 40.0%
GTATTCGTAGATCATGGCTA+AGG + chr8_3:24763437-24763456 Msa1283240:five_prime_UTR 40.0%
CATGGCTAAGGAATATTGTG+AGG + chr8_3:24763449-24763468 Msa1283240:five_prime_UTR 40.0%
!! GCGAGATTTTTAAGCGTCTA+GGG + chr8_3:24763497-24763516 Msa1283240:five_prime_UTR 40.0%
GGACAATTGTGTACAGCATT+TGG + chr8_3:24763518-24763537 Msa1283240:five_prime_UTR 40.0%
ATCCAGCATAAGTTGTTCCA+AGG - chr8_3:24763566-24763585 None:intergenic 40.0%
! TGGAATATTTCAGAGTGTCC+TGG + chr8_3:24763608-24763627 Msa1283240:five_prime_UTR 40.0%
! GGAATATTTCAGAGTGTCCT+GGG + chr8_3:24763609-24763628 Msa1283240:five_prime_UTR 40.0%
ATGTGCATGCAAGAGAAAAG+AGG - chr8_3:24763660-24763679 None:intergenic 40.0%
! CTACCTTTTAGCGATATGCA+CGG + chr8_3:24763983-24764002 Msa1283240:intron 40.0%
! TACCTTTTAGCGATATGCAC+GGG + chr8_3:24763984-24764003 Msa1283240:intron 40.0%
!! GGATGGGTTATGGATTTGAA+TGG - chr8_3:24764200-24764219 None:intergenic 40.0%
AGTCACTGTATGTGAAAGCT+AGG + chr8_3:24764245-24764264 Msa1283240:intron 40.0%
GTTTGTAGGTTTGTGGGAAA+TGG - chr8_3:24764342-24764361 None:intergenic 40.0%
ACAACCGTTTGTAGGTTTGT+GGG - chr8_3:24764348-24764367 None:intergenic 40.0%
GATACATTTGAACAGACCTC+AGG + chr8_3:24764652-24764671 Msa1283240:intron 40.0%
AATTACTTTGACCTTCCCTG+AGG - chr8_3:24764671-24764690 None:intergenic 40.0%
!! TAATGGTGGATTATAGGGTG+AGG + chr8_3:24764783-24764802 Msa1283240:intron 40.0%
!! AATGGTGGATTATAGGGTGA+GGG + chr8_3:24764784-24764803 Msa1283240:intron 40.0%
! TCTCAGAGGATTTTGTCTCA+AGG - chr8_3:24764950-24764969 None:intergenic 40.0%
! ATTTTCATGGGGGTAGCATT+TGG + chr8_3:24765200-24765219 Msa1283240:intron 40.0%
ATCATCATCCATAGAGGAGT+TGG - chr8_3:24765346-24765365 None:intergenic 40.0%
!! AATTAGGCATCGGAAACATC+AGG - chr8_3:24765389-24765408 None:intergenic 40.0%
!! CGATGCCTAATTTGCTCTTA+TGG + chr8_3:24765397-24765416 Msa1283240:intron 40.0%
!!! GGGTTTTTGGTGATGATGAT+AGG + chr8_3:24765418-24765437 Msa1283240:intron 40.0%
! TTTTCTCTGTTCCACTGATG+AGG + chr8_3:24765522-24765541 Msa1283240:intron 40.0%
TTTCTCTGTTCCACTGATGA+GGG + chr8_3:24765523-24765542 Msa1283240:intron 40.0%
TCAATTAAGTCCCTCATCAG+TGG - chr8_3:24765536-24765555 None:intergenic 40.0%
AAAATTTCCCGTATCCGCAT+TGG + chr8_3:24765653-24765672 Msa1283240:intron 40.0%
AAACCAGGATATGTAGTTGC+TGG - chr8_3:24765691-24765710 None:intergenic 40.0%
ATTTCTGCACAACAGAGGAA+AGG - chr8_3:24765784-24765803 None:intergenic 40.0%
GGCTTTCAGTTTAACATGGT+AGG - chr8_3:24765869-24765888 None:intergenic 40.0%
! GTTTTTCTTGCTCGCAACTT+TGG - chr8_3:24766115-24766134 None:intergenic 40.0%
GCAGCTTAACACACATAGTT+TGG + chr8_3:24766136-24766155 Msa1283240:CDS 40.0%
! ACACACATAGTTTGGAATCC+GGG + chr8_3:24766144-24766163 Msa1283240:CDS 40.0%
GATTGTTCTTGGTCATTGCA+TGG + chr8_3:24766186-24766205 Msa1283240:CDS 40.0%
TGTATAAGAAGAATCGGAGG+CGG + chr8_3:24766547-24766566 Msa1283240:CDS 40.0%
TATCTCCAGAGATAGAATGG+AGG + chr8_3:24766673-24766692 Msa1283240:three_prime_UTR 40.0%
TGATTCCTCCATTCTATCTC+TGG - chr8_3:24766681-24766700 None:intergenic 40.0%
GCTGAACAAAACATATGGAC+CGG - chr8_3:24766714-24766733 None:intergenic 40.0%
!! GATCACCTAGAAGTATTGTC+AGG - chr8_3:24766744-24766763 None:intergenic 40.0%
TTTAGGCTAGCATGTGATTG+TGG - chr8_3:24766847-24766866 None:intergenic 40.0%
!!! GAGTGTTGTCGTTTTGGTGA+CGG - chr8_3:24760625-24760644 None:intergenic 45.0%
!!! CGTGTAGAGTGTTGTCGTTT+TGG - chr8_3:24760631-24760650 None:intergenic 45.0%
TCGAATTTGCGCTGCAATGA+AGG - chr8_3:24760678-24760697 None:intergenic 45.0%
GCAGAAAACTCTTCCTCAGA+TGG - chr8_3:24761013-24761032 None:intergenic 45.0%
CAAATGTGTTGTGTCCGACT+CGG + chr8_3:24761134-24761153 Msa1283240:five_prime_UTR 45.0%
CTCTCGATATGAAACCGAGT+CGG - chr8_3:24761151-24761170 None:intergenic 45.0%
ACTCGGTTTCATATCGAGAG+AGG + chr8_3:24761151-24761170 Msa1283240:five_prime_UTR 45.0%
GGTTTCATATCGAGAGAGGA+AGG + chr8_3:24761155-24761174 Msa1283240:five_prime_UTR 45.0%
!! AGAGGAAGGAAACGGACTAT+TGG + chr8_3:24761169-24761188 Msa1283240:five_prime_UTR 45.0%
! ACGGACTATTGGTACCTTGA+AGG + chr8_3:24761180-24761199 Msa1283240:five_prime_UTR 45.0%
GGGAGTAGTCAAATCACTAG+TGG + chr8_3:24761552-24761571 Msa1283240:intron 45.0%
AGTCAAATCACTAGTGGCAG+AGG + chr8_3:24761558-24761577 Msa1283240:intron 45.0%
AAATCACTAGTGGCAGAGGA+AGG + chr8_3:24761562-24761581 Msa1283240:intron 45.0%
! CAAGCCTTATCCCACTAAGA+GGG - chr8_3:24761698-24761717 None:intergenic 45.0%
! TCAAGCCTTATCCCACTAAG+AGG - chr8_3:24761699-24761718 None:intergenic 45.0%
AAGTGGTCATGTGCACAATC+AGG + chr8_3:24761853-24761872 Msa1283240:intron 45.0%
! TGTTCTCTGTCTGAAGGTAC+TGG + chr8_3:24762328-24762347 Msa1283240:intron 45.0%
!! TGAAGGTACTGGTGCTCATT+TGG + chr8_3:24762339-24762358 Msa1283240:intron 45.0%
! CACCCTCCCCATAATTTTCT+GGG - chr8_3:24762365-24762384 None:intergenic 45.0%
GTGGAGAGATACTACCTAGT+CGG + chr8_3:24762382-24762401 Msa1283240:five_prime_UTR 45.0%
TTGAGTCGATATCTCCGACT+AGG - chr8_3:24762399-24762418 None:intergenic 45.0%
CTGCTAGACCTCAATCAATG+CGG + chr8_3:24762433-24762452 Msa1283240:five_prime_UTR 45.0%
TGCTAGACCTCAATCAATGC+GGG + chr8_3:24762434-24762453 Msa1283240:five_prime_UTR 45.0%
AGGCGTCATGTTAATACGTC+TGG + chr8_3:24762528-24762547 Msa1283240:five_prime_UTR 45.0%
!!! ACGTCTGGTTTTATCTGCCA+TGG + chr8_3:24762543-24762562 Msa1283240:five_prime_UTR 45.0%
CATCTCTATCAAGTGGTCCA+TGG - chr8_3:24762563-24762582 None:intergenic 45.0%
GAAGGGATTGAGCGATATTG+TGG + chr8_3:24762696-24762715 Msa1283240:five_prime_UTR 45.0%
CAAAAGGTCTACTCATGAGC+TGG + chr8_3:24762779-24762798 Msa1283240:five_prime_UTR 45.0%
GTCTACTCATGAGCTGGATT+TGG + chr8_3:24762785-24762804 Msa1283240:five_prime_UTR 45.0%
GAGTCAGACCCTTTCATCTT+AGG + chr8_3:24762879-24762898 Msa1283240:five_prime_UTR 45.0%
AGAATGGCAGCTGCAACAAA+TGG + chr8_3:24762911-24762930 Msa1283240:five_prime_UTR 45.0%
!! AATCCACTGACTTTCCATCC+AGG - chr8_3:24763257-24763276 None:intergenic 45.0%
CGCCATAGTGAAAATAGGAC+AGG - chr8_3:24763418-24763437 None:intergenic 45.0%
!! CGCGAGATTTTTAAGCGTCT+AGG + chr8_3:24763496-24763515 Msa1283240:five_prime_UTR 45.0%
ATTGTGTACAGCATTTGGGG+AGG + chr8_3:24763523-24763542 Msa1283240:five_prime_UTR 45.0%
CACAAATACGTCACTTGCCT+TGG + chr8_3:24763546-24763565 Msa1283240:five_prime_UTR 45.0%
TGCCTTGGAACAACTTATGC+TGG + chr8_3:24763561-24763580 Msa1283240:five_prime_UTR 45.0%
AAGGCATATTATGCAGAGCC+CGG + chr8_3:24763700-24763719 Msa1283240:intron 45.0%
AGAGCCCGGATACAGAAAAT+AGG + chr8_3:24763714-24763733 Msa1283240:intron 45.0%
ACTGCGAGATACGACTTCAA+TGG + chr8_3:24763937-24763956 Msa1283240:intron 45.0%
CTGCGAGATACGACTTCAAT+GGG + chr8_3:24763938-24763957 Msa1283240:intron 45.0%
ATCCCGTGCATATCGCTAAA+AGG - chr8_3:24763989-24764008 None:intergenic 45.0%
AATTACATTGACCTCCCCTG+AGG + chr8_3:24764090-24764109 Msa1283240:intron 45.0%
CTTTGAATAAACCTCAGGGG+AGG - chr8_3:24764104-24764123 None:intergenic 45.0%
CTCCCCTGAGGTTTATTCAA+AGG + chr8_3:24764102-24764121 Msa1283240:intron 45.0%
!! AGAATGCTCTGGATGGGTTA+TGG - chr8_3:24764210-24764229 None:intergenic 45.0%
! TCTCACAGAATGCTCTGGAT+GGG - chr8_3:24764216-24764235 None:intergenic 45.0%
! TTCTCACAGAATGCTCTGGA+TGG - chr8_3:24764217-24764236 None:intergenic 45.0%
GGAAATGGCAGAGGTTTAAC+TGG - chr8_3:24764327-24764346 None:intergenic 45.0%
CACAACCGTTTGTAGGTTTG+TGG - chr8_3:24764349-24764368 None:intergenic 45.0%
GCTATCTCACAACCGTTTGT+AGG - chr8_3:24764356-24764375 None:intergenic 45.0%
ATTTGAACAGACCTCAGGGA+AGG + chr8_3:24764657-24764676 Msa1283240:intron 45.0%
!! TTTATTTTCCCCTGCTCCAC+CGG - chr8_3:24764827-24764846 None:intergenic 45.0%
GATTGTGCGTGAGAATGTGT+AGG - chr8_3:24764901-24764920 None:intergenic 45.0%
ATAGGTGGATCACATGGTGA+GGG - chr8_3:24765560-24765579 None:intergenic 45.0%
TATAGGTGGATCACATGGTG+AGG - chr8_3:24765561-24765580 None:intergenic 45.0%
AACAGAGGAAAGGAAGGGTA+AGG - chr8_3:24765774-24765793 None:intergenic 45.0%
TGCACAACAGAGGAAAGGAA+GGG - chr8_3:24765779-24765798 None:intergenic 45.0%
TCCTCTGTTGTGCAGAAATG+TGG + chr8_3:24765785-24765804 Msa1283240:intron 45.0%
CTGAGTTGCATTCAAGCTAC+TGG + chr8_3:24765956-24765975 Msa1283240:CDS 45.0%
! AGTCGGGAATTTCAAGTGCT+CGG - chr8_3:24766056-24766075 None:intergenic 45.0%
ACTTGAAATTCCCGACTCTG+CGG + chr8_3:24766059-24766078 Msa1283240:CDS 45.0%
! GAGGCGGTTTTTATTGTCCA+AGG - chr8_3:24766088-24766107 None:intergenic 45.0%
! CCTTGATGACATGCTTGCAA+AGG - chr8_3:24766215-24766234 None:intergenic 45.0%
CCTTTGCAAGCATGTCATCA+AGG + chr8_3:24766212-24766231 Msa1283240:CDS 45.0%
! GTCTTTTCGGTCGTTTGAAG+AGG + chr8_3:24766278-24766297 Msa1283240:CDS 45.0%
AACGCAAACGAATCGTCAAC+TGG - chr8_3:24766327-24766346 None:intergenic 45.0%
AGTTGACGATTCGTTTGCGT+TGG + chr8_3:24766326-24766345 Msa1283240:CDS 45.0%
GTTTGCGTTGGACTTGTCAT+TGG + chr8_3:24766338-24766357 Msa1283240:CDS 45.0%
TCAATTTCGGCAACTCCTTC+TGG + chr8_3:24766498-24766517 Msa1283240:CDS 45.0%
TTCGTGTTACGGTTACCAGA+AGG - chr8_3:24766516-24766535 None:intergenic 45.0%
!!! AAGATATATTATTATTTTAA+GGG - chr8_3:24764696-24764715 None:intergenic 5.0%
!!! AAAGATATATTATTATTTTA+AGG - chr8_3:24764697-24764716 None:intergenic 5.0%
TCCTTTGCAAGACCCATCTG+AGG + chr8_3:24760997-24761016 Msa1283240:five_prime_UTR 50.0%
TCCTCAGATGGGTCTTGCAA+AGG - chr8_3:24761001-24761020 None:intergenic 50.0%
ATGTAGCCGACCCTCTTAGT+GGG + chr8_3:24761685-24761704 Msa1283240:intron 50.0%
CCTTATCCCACTAAGAGGGT+CGG - chr8_3:24761694-24761713 None:intergenic 50.0%
TGGCCCAGAAAATTATGGGG+AGG + chr8_3:24762359-24762378 Msa1283240:five_prime_UTR 50.0%
GGCCCAGAAAATTATGGGGA+GGG + chr8_3:24762360-24762379 Msa1283240:five_prime_UTR 50.0%
! CCACCCTCCCCATAATTTTC+TGG - chr8_3:24762366-24762385 None:intergenic 50.0%
CCAGAAAATTATGGGGAGGG+TGG + chr8_3:24762363-24762382 Msa1283240:five_prime_UTR 50.0%
GCTAGACCTCAATCAATGCG+GGG + chr8_3:24762435-24762454 Msa1283240:five_prime_UTR 50.0%
!! GTACAACCCCGCATTGATTG+AGG - chr8_3:24762444-24762463 None:intergenic 50.0%
GATAGAGATGCTATTGGCCC+AGG + chr8_3:24762573-24762592 Msa1283240:five_prime_UTR 50.0%
ATCAAGCTAGCATCCGCATG+TGG + chr8_3:24762811-24762830 Msa1283240:five_prime_UTR 50.0%
TCAAGCTAGCATCCGCATGT+GGG + chr8_3:24762812-24762831 Msa1283240:five_prime_UTR 50.0%
GTTGCAGCTGCCATTCTGTT+TGG - chr8_3:24762908-24762927 None:intergenic 50.0%
GTTGCTGCAGACTCATCGTT+TGG + chr8_3:24762957-24762976 Msa1283240:five_prime_UTR 50.0%
AACATGCACTTCCTGTCGCA+TGG + chr8_3:24763153-24763172 Msa1283240:five_prime_UTR 50.0%
CGTGTAATGATCCATGCGAC+AGG - chr8_3:24763167-24763186 None:intergenic 50.0%
GCTGTTCTCACAGAATGCTC+TGG - chr8_3:24764221-24764240 None:intergenic 50.0%
CACGCAAAGCTTCTGTGAAC+AGG + chr8_3:24764293-24764312 Msa1283240:intron 50.0%
AGGTTTGTGGGAAATGGCAG+AGG - chr8_3:24764336-24764355 None:intergenic 50.0%
GGCGGAGCAAAAAGTGAAAG+CGG + chr8_3:24764539-24764558 Msa1283240:intron 50.0%
GGAGCAAAAAGTGAAAGCGG+TGG + chr8_3:24764542-24764561 Msa1283240:intron 50.0%
GGCTCAATTAAGTCCCTCAC+CGG + chr8_3:24764805-24764824 Msa1283240:intron 50.0%
TCAATTAAGTCCCTCACCGG+TGG + chr8_3:24764808-24764827 Msa1283240:intron 50.0%
GGATATGTAGTTGCTGGCAC+TGG - chr8_3:24765685-24765704 None:intergenic 50.0%
GTGCCAGCAACTACATATCC+TGG + chr8_3:24765685-24765704 Msa1283240:intron 50.0%
CTGCACAACAGAGGAAAGGA+AGG - chr8_3:24765780-24765799 None:intergenic 50.0%
GCCACATTTCTGCACAACAG+AGG - chr8_3:24765789-24765808 None:intergenic 50.0%
AAATTTGCCACTGGCAAGCC+AGG + chr8_3:24765822-24765841 Msa1283240:CDS 50.0%
GTAGGCTTCTAATGCTCCAG+AGG - chr8_3:24765851-24765870 None:intergenic 50.0%
! GAGCGCTGCAAAGAGTAGAT+TGG + chr8_3:24765914-24765933 Msa1283240:CDS 50.0%
TCGCAACTTTGGCAAAGAGG+CGG - chr8_3:24766104-24766123 None:intergenic 50.0%
TGCTCGCAACTTTGGCAAAG+AGG - chr8_3:24766107-24766126 None:intergenic 50.0%
! CGTTGGACTTGTCATTGGCT+TGG + chr8_3:24766343-24766362 Msa1283240:CDS 50.0%
TCACTCCTGAGACAGAGTAG+TGG + chr8_3:24766762-24766781 Msa1283240:three_prime_UTR 50.0%
TCCTGAGACAGAGTAGTGGT+CGG + chr8_3:24766766-24766785 Msa1283240:three_prime_UTR 50.0%
CACTAAGAGGGTCGGCTACA+TGG - chr8_3:24761686-24761705 None:intergenic 55.0%
CATGTAGCCGACCCTCTTAG+TGG + chr8_3:24761684-24761703 Msa1283240:intron 55.0%
CCGACCCTCTTAGTGGGATA+AGG + chr8_3:24761691-24761710 Msa1283240:intron 55.0%
GTTGCTGCTGCTGCTGTTGT+TGG + chr8_3:24761721-24761740 Msa1283240:intron 55.0%
CAGGCTCAACACTACGAGCT+CGG - chr8_3:24763238-24763257 None:intergenic 55.0%
! CTCGTAGTGTTGAGCCTGGA+TGG + chr8_3:24763240-24763259 Msa1283240:five_prime_UTR 55.0%
GAGCCTGGATGGAAAGTCAG+TGG + chr8_3:24763251-24763270 Msa1283240:five_prime_UTR 55.0%
CTAACCAATCTTGGGCACCC+AGG - chr8_3:24763629-24763648 None:intergenic 55.0%
GGATATGAGAGCTGCTGCGT+TGG + chr8_3:24764266-24764285 Msa1283240:intron 55.0%
GTGCGATCCAATGCGGATAC+GGG - chr8_3:24765663-24765682 None:intergenic 55.0%
GGTGCGATCCAATGCGGATA+CGG - chr8_3:24765664-24765683 None:intergenic 55.0%
CTAATGCTCCAGAGGCTTCC+TGG - chr8_3:24765843-24765862 None:intergenic 55.0%
ACCGACCACTACTCTGTCTC+AGG - chr8_3:24766770-24766789 None:intergenic 55.0%
! CGAGCTCGTAGTGTTGAGCC+TGG + chr8_3:24763236-24763255 Msa1283240:five_prime_UTR 60.0%
GTGTCCTGGGTGCCCAAGAT+TGG + chr8_3:24763622-24763641 Msa1283240:five_prime_UTR 60.0%
!! GGCACTGGTGCGATCCAATG+CGG - chr8_3:24765670-24765689 None:intergenic 60.0%
TCCAAGGTGACCGCAGAGTC+GGG - chr8_3:24766072-24766091 None:intergenic 60.0%
GTCCAAGGTGACCGCAGAGT+CGG - chr8_3:24766073-24766092 None:intergenic 60.0%
AAGTCCCTCACCGGTGGAGC+AGG + chr8_3:24764814-24764833 Msa1283240:intron 65.0%
AGTCCCTCACCGGTGGAGCA+GGG + chr8_3:24764815-24764834 Msa1283240:intron 65.0%
TTCCCCTGCTCCACCGGTGA+GGG - chr8_3:24764821-24764840 None:intergenic 65.0%
TTTCCCCTGCTCCACCGGTG+AGG - chr8_3:24764822-24764841 None:intergenic 65.0%
! GAGGCTTCCTGGCTTGCCAG+TGG - chr8_3:24765832-24765851 None:intergenic 65.0%
CTGGCAAGCCAGGAAGCCTC+TGG + chr8_3:24765832-24765851 Msa1283240:CDS 65.0%
TCCCGACTCTGCGGTCACCT+TGG + chr8_3:24766068-24766087 Msa1283240:CDS 65.0%
GTCCCTCACCGGTGGAGCAG+GGG + chr8_3:24764816-24764835 Msa1283240:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 24760570 24767053 24760570 ID=Msa1283240;Name=Msa1283240
chr8_3 mRNA 24760570 24767053 24760570 ID=Msa1283240-mRNA-1;Parent=Msa1283240;Name=Msa1283240-mRNA-1;_AED=0.10;_eAED=0.10;_QI=1593|0.8|0.83|1|0.6|0.5|6|460|263
chr8_3 exon 24760570 24760720 24760570 ID=Msa1283240-mRNA-1:exon:8679;Parent=Msa1283240-mRNA-1
chr8_3 exon 24760892 24761236 24760892 ID=Msa1283240-mRNA-1:exon:8680;Parent=Msa1283240-mRNA-1
chr8_3 exon 24762344 24762995 24762344 ID=Msa1283240-mRNA-1:exon:8681;Parent=Msa1283240-mRNA-1
chr8_3 exon 24763116 24763315 24763116 ID=Msa1283240-mRNA-1:exon:8682;Parent=Msa1283240-mRNA-1
chr8_3 exon 24763399 24763643 24763399 ID=Msa1283240-mRNA-1:exon:8683;Parent=Msa1283240-mRNA-1
chr8_3 exon 24765802 24767053 24765802 ID=Msa1283240-mRNA-1:exon:8684;Parent=Msa1283240-mRNA-1
chr8_3 five_prime_UTR 24760570 24760720 24760570 ID=Msa1283240-mRNA-1:five_prime_utr;Parent=Msa1283240-mRNA-1
chr8_3 five_prime_UTR 24760892 24761236 24760892 ID=Msa1283240-mRNA-1:five_prime_utr;Parent=Msa1283240-mRNA-1
chr8_3 five_prime_UTR 24762344 24762995 24762344 ID=Msa1283240-mRNA-1:five_prime_utr;Parent=Msa1283240-mRNA-1
chr8_3 five_prime_UTR 24763116 24763315 24763116 ID=Msa1283240-mRNA-1:five_prime_utr;Parent=Msa1283240-mRNA-1
chr8_3 five_prime_UTR 24763399 24763643 24763399 ID=Msa1283240-mRNA-1:five_prime_utr;Parent=Msa1283240-mRNA-1
chr8_3 CDS 24765802 24766593 24765802 ID=Msa1283240-mRNA-1:cds;Parent=Msa1283240-mRNA-1
chr8_3 three_prime_UTR 24766594 24767053 24766594 ID=Msa1283240-mRNA-1:three_prime_utr;Parent=Msa1283240-mRNA-1
Gene Sequence

>Msa1283240

ATGTGGCTTTCAACAATGAGAAATTTGCCACTGGCAAGCCAGGAAGCCTCTGGAGCATTAGAAGCCTACCATGTTAAACTGAAAGCCAAACTTTTTGATGATTCACATCTCGGAGCGCTGCAAAGAGTAGATTGGTTAGTCCATAAGTTAACAACTGAGTTGCATTCAAGCTACTGGCTTGATCGTTTCGCTGATGAAAGTGATTCTTTCCAGAATGTGAAAGAAGGTTATATTGCTTCTACGTCATGGCACCGAGCACTTGAAATTCCCGACTCTGCGGTCACCTTGGACAATAAAAACCGCCTCTTTGCCAAAGTTGCGAGCAAGAAAAACAGCAGCTTAACACACATAGTTTGGAATCCGGGATCTGAATTTTCATTCTGTGATTGTTCTTGGTCATTGCATGGTAACCTTTGCAAGCATGTCATCAAGGTAAACATGATTTGTGAAAATCTTCAAGGTTGTCAATCGTCAATGTCTTTTCGGTCGTTTGAAGAGGTTTTAATGGATCTATGGGGAAAACCAGTTGACGATTCGTTTGCGTTGGACTTGTCATTGGCTTGGACCCACCAAATGCTAGATCAAATTCAAAAACTTGTTGAACTGAATAATTCAACTAATATTGGTACTGTAGTAAACAATATGCCTCTGAAATGGGTTTCAAAGAAACGCAGAACCAATATTGGCAAACGATCTTCAATTTCGGCAACTCCTTCTGGTAACCGTAACACGAAAAGTGTTGTTGTGTATAAGAAGAATCGGAGGCGGAAAAGATTGTCACAACTAAGATGA
Protein sequence

>Msa1283240

MWLSTMRNLPLASQEASGALEAYHVKLKAKLFDDSHLGALQRVDWLVHKLTTELHSSYWLDRFADESDSFQNVKEGYIASTSWHRALEIPDSAVTLDNKNRLFAKVASKKNSSLTHIVWNPGSEFSFCDCSWSLHGNLCKHVIKVNMICENLQGCQSSMSFRSFEEVLMDLWGKPVDDSFALDLSLAWTHQMLDQIQKLVELNNSTNIGTVVNNMPLKWVSKKRRTNIGKRSSISATPSGNRNTKSVVVYKKNRRRKRLSQLR*