Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270410 | G7L6Y2 | 97.338 | 263 | 7 | 0 | 1 | 263 | 459 | 721 | 0.0 | 531 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0075500 | Msa1270410 | 0.801645 | 8.164009e-49 | -8.615850e-47 |
| Msa0105620 | Msa1270410 | 0.801374 | 9.281731e-49 | -8.615850e-47 |
| Msa1227450 | Msa1270410 | 0.933268 | 2.432041e-95 | -8.615850e-47 |
| Msa1270410 | Msa1283240 | 0.951199 | 3.379915e-109 | -8.615850e-47 |
| Msa1183100 | Msa1270410 | -0.800926 | 1.145733e-48 | -8.615850e-47 |
| Msa0974400 | Msa1270410 | 0.802073 | 6.670989e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270410 | MtrunA17_Chr8g0355041 | 97.338 | 263 | 7 | 0 | 1 | 263 | 459 | 721 | 0.0 | 531 |
| Msa1270410 | MtrunA17_Chr5g0415181 | 76.684 | 193 | 20 | 1 | 1 | 193 | 376 | 543 | 7.81e-100 | 301 |
| Msa1270410 | MtrunA17_Chr8g0355051 | 92.908 | 141 | 10 | 0 | 60 | 200 | 14 | 154 | 3.02e-95 | 276 |
| Msa1270410 | MtrunA17_Chr4g0041591 | 34.826 | 201 | 127 | 2 | 2 | 201 | 457 | 654 | 4.67e-34 | 130 |
| Msa1270410 | MtrunA17_Chr3g0138611 | 40.367 | 109 | 65 | 0 | 1 | 109 | 203 | 311 | 2.22e-26 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270410 | AT1G60560.1 | 65.891 | 258 | 77 | 1 | 1 | 258 | 457 | 703 | 3.00e-119 | 357 |
| Msa1270410 | AT4G13970.2 | 37.561 | 205 | 124 | 2 | 2 | 205 | 283 | 484 | 2.91e-41 | 149 |
| Msa1270410 | AT4G13970.1 | 37.561 | 205 | 124 | 2 | 2 | 205 | 459 | 660 | 4.76e-41 | 150 |
| Msa1270410 | AT1G60560.2 | 84.091 | 44 | 7 | 0 | 1 | 44 | 457 | 500 | 3.11e-18 | 84.3 |
Find 176 sgRNAs with CRISPR-Local
Find 442 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGTCAGACCCTTTCATCTT+AGG | 0.173220 | 8_3:-3781975 | Msa1270410:five_prime_UTR |
| TATAACCTTCTTTCACATTC+TGG | 0.214883 | 8_3:+3778844 | None:intergenic |
| CAACTCTATCATAAGGAATA+AGG | 0.217668 | 8_3:+3783767 | None:intergenic |
| GACTTAACTTGGACTAAGTT+TGG | 0.231965 | 8_3:-3783817 | Msa1270410:five_prime_UTR |
| TGAAGATCGTTTGCCAATAT+TGG | 0.233970 | 8_3:+3778377 | None:intergenic |
| GCAACTCAGTTGTTAACTTA+TGG | 0.236095 | 8_3:+3778913 | None:intergenic |
| TTATACCTGACAATACTTCT+AGG | 0.237742 | 8_3:-3778119 | Msa1270410:three_prime_UTR |
| GATTCAATAAATGAATATTT+AGG | 0.239947 | 8_3:+3777994 | None:intergenic |
| TCATTTGGCCCAGAAAATTA+TGG | 0.245093 | 8_3:-3782500 | Msa1270410:five_prime_UTR |
| TGTTGACCAAACTGATTTCT+TGG | 0.248536 | 8_3:-3781266 | Msa1270410:five_prime_UTR |
| TTTCATTCTGTGATTGTTCT+TGG | 0.250215 | 8_3:-3778680 | Msa1270410:CDS |
| AAAATTTGTTGGCGTATTAT+TGG | 0.253995 | 8_3:-3777823 | None:intergenic |
| CTAATGCTCCAGAGGCTTCC+TGG | 0.257802 | 8_3:+3779015 | None:intergenic |
| TCAATTTCGGCAACTCCTTC+TGG | 0.290502 | 8_3:-3778357 | Msa1270410:CDS |
| CTGAATAATTCAACTAATAT+TGG | 0.292288 | 8_3:-3778450 | Msa1270410:CDS |
| TGAATTTCATTACATATATA+TGG | 0.301917 | 8_3:+3782245 | None:intergenic |
| GACAATTGTGTACAGCATTT+GGG | 0.302961 | 8_3:-3781335 | Msa1270410:five_prime_UTR |
| TTCTCCAAGATATTCTCTTC+TGG | 0.310022 | 8_3:+3782188 | None:intergenic |
| GTCTACTCATGAGCTGGATT+TGG | 0.314206 | 8_3:-3782069 | Msa1270410:five_prime_UTR |
| CAAAGCCTGATGTGTCTAAA+TGG | 0.318755 | 8_3:-3781659 | Msa1270410:five_prime_UTR |
| GGACAATTGTGTACAGCATT+TGG | 0.325700 | 8_3:-3781336 | Msa1270410:five_prime_UTR |
| TAAACAATATGCCTCTGAAA+TGG | 0.327119 | 8_3:-3778419 | Msa1270410:CDS |
| GCAGCTTAACACACATAGTT+TGG | 0.329117 | 8_3:-3778719 | Msa1270410:CDS |
| TATGTACATATAAAATTTGT+TGG | 0.342310 | 8_3:-3777834 | Msa1270410:three_prime_UTR |
| TGGTACCTTGAAGGAGTATA+AGG | 0.354758 | 8_3:-3783665 | Msa1270410:five_prime_UTR |
| AGGCTATTGACTTGTGCATT+TGG | 0.358551 | 8_3:+3782134 | None:intergenic |
| TGAAGGTACTGGTGCTCATT+TGG | 0.359766 | 8_3:-3782515 | Msa1270410:intron |
| TTTGAATTTGATCTAGCATT+TGG | 0.360298 | 8_3:+3778484 | None:intergenic |
| TGGCAAACGATCTTCAATTT+CGG | 0.361508 | 8_3:-3778370 | Msa1270410:CDS |
| TGATTCCTCCATTCTATCTC+TGG | 0.362006 | 8_3:+3778177 | None:intergenic |
| ACTTAACTTGGACTAAGTTT+GGG | 0.366809 | 8_3:-3783816 | Msa1270410:five_prime_UTR |
| TTTCAAGTGCTTAGTTTACT+TGG | 0.367899 | 8_3:-3777930 | Msa1270410:three_prime_UTR |
| GAATACGCCATAGTGAAAAT+AGG | 0.368753 | 8_3:+3781434 | None:intergenic |
| GTTGCAGCTGCCATTCTGTT+TGG | 0.371205 | 8_3:+3781949 | None:intergenic |
| TGGAATATTTCAGAGTGTCC+TGG | 0.375553 | 8_3:-3781246 | Msa1270410:five_prime_UTR |
| GAGAAAGATCTAACCAATCT+TGG | 0.377361 | 8_3:+3781219 | None:intergenic |
| CTGGCAAGCCAGGAAGCCTC+TGG | 0.378836 | 8_3:-3779023 | Msa1270410:CDS |
| AAGAAACGCAGAACCAATAT+TGG | 0.379365 | 8_3:-3778390 | Msa1270410:CDS |
| GTTTGCGTTGGACTTGTCAT+TGG | 0.379996 | 8_3:-3778517 | Msa1270410:CDS |
| CTGCAACAAATGGTTCGTTT+TGG | 0.384256 | 8_3:-3781933 | Msa1270410:five_prime_UTR |
| TATCATATGTTGAAACATAA+TGG | 0.392285 | 8_3:+3778251 | None:intergenic |
| CATTTGGCCCAGAAAATTAT+GGG | 0.397036 | 8_3:-3782499 | Msa1270410:five_prime_UTR |
| ATGATTTGTGAAAATCTTCA+AGG | 0.398133 | 8_3:-3778615 | Msa1270410:CDS |
| CGTGTAGAGTGTTGTCGTTT+TGG | 0.400197 | 8_3:+3784214 | None:intergenic |
| CACAAATACGTCACTTGCCT+TGG | 0.403243 | 8_3:-3781308 | Msa1270410:five_prime_UTR |
| TGCCTTGGAACAACTTATGC+TGG | 0.406463 | 8_3:-3781293 | Msa1270410:five_prime_UTR |
| CGTTGGACTTGTCATTGGCT+TGG | 0.407304 | 8_3:-3778512 | Msa1270410:CDS |
| TCGAATTTGCGCTGCAATGA+AGG | 0.411779 | 8_3:+3784167 | None:intergenic |
| CAAAACCATACAATCACAAA+AGG | 0.416674 | 8_3:-3784144 | Msa1270410:five_prime_UTR |
| AACTCTATCATAAGGAATAA+GGG | 0.419590 | 8_3:+3783768 | None:intergenic |
| AGGCGTCATGTTAATACGTC+TGG | 0.425938 | 8_3:-3782326 | Msa1270410:five_prime_UTR |
| AACGCAAACGAATCGTCAAC+TGG | 0.430046 | 8_3:+3778531 | None:intergenic |
| AGTCAGACCCTTTCATCTTA+GGG | 0.430987 | 8_3:-3781974 | Msa1270410:five_prime_UTR |
| TTTCTGCTGCTGACTTAACT+TGG | 0.431406 | 8_3:-3783828 | Msa1270410:five_prime_UTR |
| AAATTTGCCACTGGCAAGCC+AGG | 0.432556 | 8_3:-3779033 | Msa1270410:CDS |
| AACACACATAGTTTGGAATC+CGG | 0.434512 | 8_3:-3778712 | Msa1270410:CDS |
| ATCATCCTTATACTCCTTCA+AGG | 0.435511 | 8_3:+3783660 | None:intergenic |
| TTCTCAGTATGTTCACAAGC+TGG | 0.439459 | 8_3:-3782108 | Msa1270410:five_prime_UTR |
| TCCAAGGTGACCGCAGAGTC+GGG | 0.447010 | 8_3:+3778786 | None:intergenic |
| TAAAAGCTGAACAAAACATA+TGG | 0.452208 | 8_3:+3778139 | None:intergenic |
| TTAAGCCATTTAGACACATC+AGG | 0.452483 | 8_3:+3781654 | None:intergenic |
| AATATTCCAAGAAATCAGTT+TGG | 0.454936 | 8_3:+3781260 | None:intergenic |
| AAAGCATCAACTCTATCATA+AGG | 0.460556 | 8_3:+3783760 | None:intergenic |
| GAATTTGATCTAGCATTTGG+TGG | 0.469172 | 8_3:+3778487 | None:intergenic |
| AGAGGAAGGAAACGGACTAT+TGG | 0.472848 | 8_3:-3783685 | Msa1270410:five_prime_UTR |
| AAACAATATGCCTCTGAAAT+GGG | 0.473142 | 8_3:-3778418 | Msa1270410:CDS |
| GGAATATTTCAGAGTGTCCT+GGG | 0.483202 | 8_3:-3781245 | Msa1270410:five_prime_UTR |
| CTGAGTTGCATTCAAGCTAC+TGG | 0.483298 | 8_3:-3778899 | Msa1270410:CDS |
| GTTGCTGCAGACTCATCGTT+TGG | 0.485294 | 8_3:-3781897 | Msa1270410:five_prime_UTR |
| AATTTGATCTAGCATTTGGT+GGG | 0.487552 | 8_3:+3778488 | None:intergenic |
| TGCTAGACCTCAATCAATGC+GGG | 0.487955 | 8_3:-3782420 | Msa1270410:five_prime_UTR |
| GTGTCCTGGGTGCCCAAGAT+TGG | 0.489927 | 8_3:-3781232 | Msa1270410:intron |
| CTCGTAGTGTTGAGCCTGGA+TGG | 0.491528 | 8_3:-3781614 | Msa1270410:five_prime_UTR |
| TTCAAGTGCTTAGTTTACTT+GGG | 0.491962 | 8_3:-3777929 | Msa1270410:three_prime_UTR |
| TAACTCTGCTTAGTGAAAAG+TGG | 0.493614 | 8_3:-3778230 | Msa1270410:three_prime_UTR |
| GCAGAAAACTCTTCCTCAGA+TGG | 0.496981 | 8_3:+3783844 | None:intergenic |
| ATGATGAATATCTTGAGTAC+AGG | 0.497587 | 8_3:-3783642 | Msa1270410:five_prime_UTR |
| AAATATCTCCAGAGATAGAA+TGG | 0.498899 | 8_3:-3778185 | Msa1270410:three_prime_UTR |
| ACCGACCACTACTCTGTCTC+AGG | 0.501890 | 8_3:+3778088 | None:intergenic |
| ACGGACTATTGGTACCTTGA+AGG | 0.502644 | 8_3:-3783674 | Msa1270410:five_prime_UTR |
| CCACTTGATAGAGATGCTAT+TGG | 0.502938 | 8_3:-3782287 | Msa1270410:five_prime_UTR |
| CAAAAGGTCTACTCATGAGC+TGG | 0.506029 | 8_3:-3782075 | Msa1270410:five_prime_UTR |
| TGGAATGCCGAGATATATCA+TGG | 0.508860 | 8_3:+3782208 | None:intergenic |
| AGAAAGATCTAACCAATCTT+GGG | 0.512121 | 8_3:+3781220 | None:intergenic |
| TCTTTCCAGAATGTGAAAGA+AGG | 0.512792 | 8_3:-3778849 | Msa1270410:CDS |
| TGCTCGCAACTTTGGCAAAG+AGG | 0.516651 | 8_3:+3778751 | None:intergenic |
| TCCCGACTCTGCGGTCACCT+TGG | 0.517806 | 8_3:-3778787 | Msa1270410:CDS |
| TGACTATAGTTGAATCAGTA+AGG | 0.518479 | 8_3:-3783885 | Msa1270410:five_prime_UTR |
| GTCCAAGGTGACCGCAGAGT+CGG | 0.519116 | 8_3:+3778785 | None:intergenic |
| GGCTTTCAGTTTAACATGGT+AGG | 0.519261 | 8_3:+3778989 | None:intergenic |
| GAGCGCTGCAAAGAGTAGAT+TGG | 0.520110 | 8_3:-3778941 | Msa1270410:CDS |
| GTTTGGATCCCTAAGATGAA+AGG | 0.520145 | 8_3:+3781966 | None:intergenic |
| AGAATGGCAGCTGCAACAAA+TGG | 0.522227 | 8_3:-3781943 | Msa1270410:five_prime_UTR |
| TTGTTGTGTATAAGAAGAAT+CGG | 0.524032 | 8_3:-3778314 | Msa1270410:CDS |
| CAGAATGAAAATTCAGATCC+CGG | 0.524168 | 8_3:+3778693 | None:intergenic |
| TGGGAAAATATATCTTTCCA+TGG | 0.524310 | 8_3:-3777910 | Msa1270410:three_prime_UTR |
| TTTGGATCCCTAAGATGAAA+GGG | 0.526445 | 8_3:+3781967 | None:intergenic |
| AGCTGGGCATGATTATCAAA+AGG | 0.527348 | 8_3:-3782091 | Msa1270410:five_prime_UTR |
| CATTCCAGAAGAGAATATCT+TGG | 0.527524 | 8_3:-3782192 | Msa1270410:five_prime_UTR |
| AACAATGAGAAATTTGCCAC+TGG | 0.529261 | 8_3:-3779042 | Msa1270410:CDS |
| ACACACATAGTTTGGAATCC+GGG | 0.531408 | 8_3:-3778711 | Msa1270410:CDS |
| GATTGTTCTTGGTCATTGCA+TGG | 0.531766 | 8_3:-3778669 | Msa1270410:CDS |
| TCCTCAGATGGGTCTTGCAA+AGG | 0.541517 | 8_3:+3783856 | None:intergenic |
| GATAGAGATGCTATTGGCCC+AGG | 0.541655 | 8_3:-3782281 | Msa1270410:five_prime_UTR |
| GATCACCTAGAAGTATTGTC+AGG | 0.542634 | 8_3:+3778114 | None:intergenic |
| GAGGCTTCCTGGCTTGCCAG+TGG | 0.542762 | 8_3:+3779026 | None:intergenic |
| CCTTGATGACATGCTTGCAA+AGG | 0.543568 | 8_3:+3778643 | None:intergenic |
| CAAATGTGTTGTGTCCGACT+CGG | 0.550658 | 8_3:-3783720 | Msa1270410:five_prime_UTR |
| GTACAACCCCGCATTGATTG+AGG | 0.553008 | 8_3:+3782413 | None:intergenic |
| ATCAAGCTAGCATCCGCATG+TGG | 0.554926 | 8_3:-3782043 | Msa1270410:five_prime_UTR |
| CGAGCTCGTAGTGTTGAGCC+TGG | 0.555154 | 8_3:-3781618 | Msa1270410:five_prime_UTR |
| GTTATATTGCTTCTACGTCA+TGG | 0.555768 | 8_3:-3778827 | Msa1270410:CDS |
| CGTGTAATGATCCATGCGAC+AGG | 0.557827 | 8_3:+3781690 | None:intergenic |
| TTTAGGCTAGCATGTGATTG+TGG | 0.557889 | 8_3:+3778011 | None:intergenic |
| TTCTTTGAAACCCATTTCAG+AGG | 0.558546 | 8_3:+3778408 | None:intergenic |
| TCTCAGTATGTTCACAAGCT+GGG | 0.558885 | 8_3:-3782107 | Msa1270410:five_prime_UTR |
| AACATGCACTTCCTGTCGCA+TGG | 0.559400 | 8_3:-3781701 | Msa1270410:five_prime_UTR |
| CGCCATAGTGAAAATAGGAC+AGG | 0.560352 | 8_3:+3781439 | None:intergenic |
| GGCCCAGAAAATTATGGGGA+GGG | 0.561467 | 8_3:-3782494 | Msa1270410:five_prime_UTR |
| CCTTTGCAAGCATGTCATCA+AGG | 0.563826 | 8_3:-3778643 | Msa1270410:CDS |
| GCTGAACAAAACATATGGAC+CGG | 0.563942 | 8_3:+3778144 | None:intergenic |
| AAAACCATACAATCACAAAA+GGG | 0.569176 | 8_3:-3784143 | Msa1270410:intron |
| CAGAAAACTCTTCCTCAGAT+GGG | 0.571289 | 8_3:+3783845 | None:intergenic |
| ACAATGTCCATGATATATCT+CGG | 0.572446 | 8_3:-3782215 | Msa1270410:five_prime_UTR |
| CATCTCTATCAAGTGGTCCA+TGG | 0.572546 | 8_3:+3782294 | None:intergenic |
| CAGGCTCAACACTACGAGCT+CGG | 0.574462 | 8_3:+3781619 | None:intergenic |
| ATATCGAGAGAGGAAGGAAA+CGG | 0.578403 | 8_3:-3783693 | Msa1270410:five_prime_UTR |
| AGTTGACGATTCGTTTGCGT+TGG | 0.578440 | 8_3:-3778529 | Msa1270410:CDS |
| TCTTGGAGAAACATATCGAA+GGG | 0.580818 | 8_3:-3782175 | Msa1270410:five_prime_UTR |
| AAGTAAACTAAGCACTTGAA+AGG | 0.581140 | 8_3:+3777932 | None:intergenic |
| GAAGGGATTGAGCGATATTG+TGG | 0.582808 | 8_3:-3782158 | Msa1270410:five_prime_UTR |
| AGTCGGGAATTTCAAGTGCT+CGG | 0.584068 | 8_3:+3778802 | None:intergenic |
| AGGACTTCAAATTAGAACAA+TGG | 0.585586 | 8_3:+3777952 | None:intergenic |
| AATCCACTGACTTTCCATCC+AGG | 0.586823 | 8_3:+3781600 | None:intergenic |
| TCAAATTAGAACAATGGAGA+TGG | 0.591593 | 8_3:+3777958 | None:intergenic |
| TATATAATAAGTGCAAGTGA+TGG | 0.591768 | 8_3:+3782356 | None:intergenic |
| ATCCAGCATAAGTTGTTCCA+AGG | 0.593556 | 8_3:+3781291 | None:intergenic |
| TATGGCGTATTCGTAGATCA+TGG | 0.594029 | 8_3:-3781423 | Msa1270410:five_prime_UTR |
| CACTTATTATATACAATGAG+AGG | 0.595812 | 8_3:-3782346 | Msa1270410:five_prime_UTR |
| ACGTTTGACAACAAAATGAC+AGG | 0.597239 | 8_3:+3782391 | None:intergenic |
| TCTTAGGGATCCAAACAGAA+TGG | 0.598757 | 8_3:-3781959 | Msa1270410:five_prime_UTR |
| ACAATTGTGTACAGCATTTG+GGG | 0.598980 | 8_3:-3781334 | Msa1270410:five_prime_UTR |
| CCAGAAAATTATGGGGAGGG+TGG | 0.614713 | 8_3:-3782491 | Msa1270410:five_prime_UTR |
| GTAGGCTTCTAATGCTCCAG+AGG | 0.615309 | 8_3:+3779007 | None:intergenic |
| TGGCCCAGAAAATTATGGGG+AGG | 0.615544 | 8_3:-3782495 | Msa1270410:five_prime_UTR |
| ATCTTGGAGAAACATATCGA+AGG | 0.622305 | 8_3:-3782176 | Msa1270410:five_prime_UTR |
| GGTTTCATATCGAGAGAGGA+AGG | 0.627014 | 8_3:-3783699 | Msa1270410:five_prime_UTR |
| TCGCAACTTTGGCAAAGAGG+CGG | 0.628348 | 8_3:+3778754 | None:intergenic |
| TTGAGTCGATATCTCCGACT+AGG | 0.628609 | 8_3:+3782458 | None:intergenic |
| TCCTTTGCAAGACCCATCTG+AGG | 0.629277 | 8_3:-3783857 | Msa1270410:five_prime_UTR |
| GTGGAGAGATACTACCTAGT+CGG | 0.629327 | 8_3:-3782472 | Msa1270410:five_prime_UTR |
| CTAACCAATCTTGGGCACCC+AGG | 0.630205 | 8_3:+3781228 | None:intergenic |
| TTCGTGTTACGGTTACCAGA+AGG | 0.630622 | 8_3:+3778342 | None:intergenic |
| CATGGCTAAGGAATATTGTG+AGG | 0.632897 | 8_3:-3781405 | Msa1270410:five_prime_UTR |
| GTATTCGTAGATCATGGCTA+AGG | 0.636241 | 8_3:-3781417 | Msa1270410:five_prime_UTR |
| GTTTGGCTTTCAGTTTAACA+TGG | 0.637960 | 8_3:+3778985 | None:intergenic |
| CCAATAGCATCTCTATCAAG+TGG | 0.639002 | 8_3:+3782287 | None:intergenic |
| TATTTCGTTCAACCCACATG+CGG | 0.641485 | 8_3:+3782030 | None:intergenic |
| CTCTCGATATGAAACCGAGT+CGG | 0.654226 | 8_3:+3783706 | None:intergenic |
| ACTCGGTTTCATATCGAGAG+AGG | 0.656336 | 8_3:-3783703 | Msa1270410:five_prime_UTR |
| TCCTGAGACAGAGTAGTGGT+CGG | 0.666617 | 8_3:-3778089 | Msa1270410:three_prime_UTR |
| TCAAGCTAGCATCCGCATGT+GGG | 0.671175 | 8_3:-3782042 | Msa1270410:five_prime_UTR |
| TGTATAAGAAGAATCGGAGG+CGG | 0.671482 | 8_3:-3778308 | Msa1270410:CDS |
| CTGCTAGACCTCAATCAATG+CGG | 0.672333 | 8_3:-3782421 | Msa1270410:five_prime_UTR |
| ATTTGGCCCAGAAAATTATG+GGG | 0.674830 | 8_3:-3782498 | Msa1270410:five_prime_UTR |
| GAGGAAATGCAATAATATCG+AGG | 0.676192 | 8_3:-3781386 | Msa1270410:five_prime_UTR |
| GAATTCTGAACATTATGATG+AGG | 0.676766 | 8_3:-3783794 | Msa1270410:five_prime_UTR |
| TGTGAACATACTGAGAAGCA+AGG | 0.684133 | 8_3:+3782114 | None:intergenic |
| ACTTGAAATTCCCGACTCTG+CGG | 0.684327 | 8_3:-3778796 | Msa1270410:CDS |
| GCTAGACCTCAATCAATGCG+GGG | 0.688131 | 8_3:-3782419 | Msa1270410:five_prime_UTR |
| GAGCCTGGATGGAAAGTCAG+TGG | 0.689150 | 8_3:-3781603 | Msa1270410:five_prime_UTR |
| ATTGTGTACAGCATTTGGGG+AGG | 0.694956 | 8_3:-3781331 | Msa1270410:five_prime_UTR |
| TTGTGTATAAGAAGAATCGG+AGG | 0.709540 | 8_3:-3778311 | Msa1270410:CDS |
| TATCTCCAGAGATAGAATGG+AGG | 0.713703 | 8_3:-3778182 | Msa1270410:three_prime_UTR |
| AAAACAAGTAGAGTGAACAA+GGG | 0.720099 | 8_3:+3781735 | None:intergenic |
| TCACTCCTGAGACAGAGTAG+TGG | 0.728848 | 8_3:-3778093 | Msa1270410:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATGTTATTTTTTATTTC+AGG | - | chr8_3:3778124-3778143 | Msa1270410:three_prime_UTR | 10.0% |
| !!! | AAATGTTATTTTTTATTTCA+GGG | - | chr8_3:3778125-3778144 | Msa1270410:three_prime_UTR | 10.0% |
| !! | AATTAGTTAGATTAAAAATA+AGG | - | chr8_3:3781306-3781325 | Msa1270410:five_prime_UTR | 10.0% |
| !! | ATTAGTTAGATTAAAAATAA+GGG | - | chr8_3:3781307-3781326 | Msa1270410:five_prime_UTR | 10.0% |
| !! | AAAAAAATAATAAATGTCTA+GGG | - | chr8_3:3781836-3781855 | Msa1270410:intron | 10.0% |
| !!! | AGATATATTATTATTTTAAG+GGG | + | chr8_3:3781937-3781956 | None:intergenic | 10.0% |
| !! | TTTATAGTAATATATTAATG+AGG | - | chr8_3:3781985-3782004 | Msa1270410:five_prime_UTR | 10.0% |
| !!! | AATGATCATTTTTATAATAA+TGG | - | chr8_3:3782008-3782027 | Msa1270410:five_prime_UTR | 10.0% |
| !! | AGTGTTAATATTAATAATAA+AGG | - | chr8_3:3782358-3782377 | Msa1270410:five_prime_UTR | 10.0% |
| !! | AAAAAAAGTTATATTACTAT+AGG | + | chr8_3:3782819-3782838 | None:intergenic | 10.0% |
| !!! | TTTTAACTATTTATCTCAAA+AGG | - | chr8_3:3778093-3778112 | Msa1270410:three_prime_UTR | 15.0% |
| !! | TTTAACTATTTATCTCAAAA+GGG | - | chr8_3:3778094-3778113 | Msa1270410:three_prime_UTR | 15.0% |
| !!! | ATTTGAAAAAGTTTTGTTTT+TGG | - | chr8_3:3778171-3778190 | Msa1270410:three_prime_UTR | 15.0% |
| !!! | ATAAGACAAAAATTTTAACA+AGG | + | chr8_3:3779196-3779215 | None:intergenic | 15.0% |
| !!! | TTGTTAAAATTTTTGTCTTA+TGG | - | chr8_3:3779195-3779214 | Msa1270410:intron | 15.0% |
| !! | TGAATTTCATTACATATATA+TGG | + | chr8_3:3779854-3779873 | None:intergenic | 15.0% |
| !! | GAAAAAAATAATAAATGTCT+AGG | - | chr8_3:3781835-3781854 | Msa1270410:intron | 15.0% |
| !! | AAAAAATAATAAATGTCTAG+GGG | - | chr8_3:3781837-3781856 | Msa1270410:intron | 15.0% |
| !! | AATATTAATAATAAAGGTGA+AGG | - | chr8_3:3782364-3782383 | Msa1270410:five_prime_UTR | 15.0% |
| !!! | AGTTTTTTATTAATGTATCA+AGG | - | chr8_3:3782843-3782862 | Msa1270410:intron | 15.0% |
| !! | TTAAAATTCAAGATACAATA+AGG | + | chr8_3:3782875-3782894 | None:intergenic | 15.0% |
| !! | GATTCAATAAATGAATATTT+AGG | + | chr8_3:3784105-3784124 | None:intergenic | 15.0% |
| !! | TATGTACATATAAAATTTGT+TGG | - | chr8_3:3784262-3784281 | Msa1270410:five_prime_UTR | 15.0% |
| !! | TCATAATAACTTAGAGTAAA+GGG | + | chr8_3:3778512-3778531 | None:intergenic | 20.0% |
| !! | ATCATAATAACTTAGAGTAA+AGG | + | chr8_3:3778513-3778532 | None:intergenic | 20.0% |
| !!! | ATGATCAAGTTTTACTTTTT+TGG | - | chr8_3:3778528-3778547 | Msa1270410:CDS | 20.0% |
| !! | AAGAATCAAAATTTCTACAA+GGG | + | chr8_3:3778698-3778717 | None:intergenic | 20.0% |
| !!! | AATTTTGATTCTTGTTAACT+CGG | - | chr8_3:3778705-3778724 | Msa1270410:CDS | 20.0% |
| !!! | GTTTCTCTTATAAATTTTCT+AGG | + | chr8_3:3778830-3778849 | None:intergenic | 20.0% |
| !! | TGATATATGATAGAACATTA+TGG | - | chr8_3:3778891-3778910 | Msa1270410:CDS | 20.0% |
| !!! | CAAGGATATAATTTTCTAAA+CGG | + | chr8_3:3779178-3779197 | None:intergenic | 20.0% |
| !!! | ACATATATATGGAATCTTTT+TGG | + | chr8_3:3779843-3779862 | None:intergenic | 20.0% |
| !!! | AAAATCTGTATTTTTTCATC+AGG | - | chr8_3:3780090-3780109 | Msa1270410:intron | 20.0% |
| !!! | TTATTTCTTTAAAATGCGTT+TGG | - | chr8_3:3780567-3780586 | Msa1270410:intron | 20.0% |
| !! | AATTATCAGACTATCAATAT+CGG | - | chr8_3:3780981-3781000 | Msa1270410:intron | 20.0% |
| !!! | AAAATAGTTCTGATATTTCT+AGG | + | chr8_3:3781042-3781061 | None:intergenic | 20.0% |
| !! | ATTGAAAACACAAAAACTAT+CGG | - | chr8_3:3781064-3781083 | Msa1270410:intron | 20.0% |
| !! | AAAAATAATAAATGTCTAGG+GGG | - | chr8_3:3781838-3781857 | Msa1270410:intron | 20.0% |
| !!! | GATCATTTTTATAATAATGG+TGG | - | chr8_3:3782011-3782030 | Msa1270410:five_prime_UTR | 20.0% |
| !!! | TTATAATAATGGTGGATTAT+AGG | - | chr8_3:3782019-3782038 | Msa1270410:five_prime_UTR | 20.0% |
| !!! | TATAATAATGGTGGATTATA+GGG | - | chr8_3:3782020-3782039 | Msa1270410:five_prime_UTR | 20.0% |
| !!! | GAAACATTGATTAAATCTAA+TGG | + | chr8_3:3782092-3782111 | None:intergenic | 20.0% |
| !! | AAGTAATGAAGAATTGATTA+GGG | + | chr8_3:3782232-3782251 | None:intergenic | 20.0% |
| !! | ATTAAATCAAATTCAGATAG+TGG | - | chr8_3:3782294-3782313 | Msa1270410:five_prime_UTR | 20.0% |
| !! | AACAAAAAAAAAAATGCTGA+CGG | - | chr8_3:3782496-3782515 | Msa1270410:five_prime_UTR | 20.0% |
| !!! | TTTTAATGAATCTCAATCAT+TGG | - | chr8_3:3782723-3782742 | Msa1270410:intron | 20.0% |
| !! | AAAAGTTATATTACTATAGG+TGG | + | chr8_3:3782816-3782835 | None:intergenic | 20.0% |
| !! | CTGAATAATTCAACTAATAT+TGG | - | chr8_3:3783646-3783665 | Msa1270410:five_prime_UTR | 20.0% |
| !! | TATCATATGTTGAAACATAA+TGG | + | chr8_3:3783848-3783867 | None:intergenic | 20.0% |
| !! | AAACAAAAATAAATGATCCA+TGG | + | chr8_3:3784206-3784225 | None:intergenic | 20.0% |
| !!! | GATCATTTATTTTTGTTTTC+TGG | - | chr8_3:3784208-3784227 | Msa1270410:five_prime_UTR | 20.0% |
| ! | AAAACCATACAATCACAAAA+GGG | - | chr8_3:3777953-3777972 | Msa1270410:three_prime_UTR | 25.0% |
| !!! | TGTGTTTTTTCCACAATTTT+TGG | - | chr8_3:3778015-3778034 | Msa1270410:three_prime_UTR | 25.0% |
| ! | GTAATTCAATCCAAAAATTG+TGG | + | chr8_3:3778028-3778047 | None:intergenic | 25.0% |
| !!! | TGTTTTTGGTTGAACTTTTA+TGG | - | chr8_3:3778185-3778204 | Msa1270410:three_prime_UTR | 25.0% |
| ! | AACTCTATCATAAGGAATAA+GGG | + | chr8_3:3778331-3778350 | None:intergenic | 25.0% |
| !!! | AGAGTTGATGCTTTTATAAT+TGG | - | chr8_3:3778345-3778364 | Msa1270410:CDS | 25.0% |
| !!! | GAGTTGATGCTTTTATAATT+GGG | - | chr8_3:3778346-3778365 | Msa1270410:CDS | 25.0% |
| !!! | AGTTGATGCTTTTATAATTG+GGG | - | chr8_3:3778347-3778366 | Msa1270410:CDS | 25.0% |
| ! | TATGGTAGAACATTAGAATT+TGG | - | chr8_3:3778621-3778640 | Msa1270410:CDS | 25.0% |
| ! | CAAGAATCAAAATTTCTACA+AGG | + | chr8_3:3778699-3778718 | None:intergenic | 25.0% |
| ! | TACCAACATGAAAAACATTA+GGG | + | chr8_3:3778995-3779014 | None:intergenic | 25.0% |
| ! | TTACCAACATGAAAAACATT+AGG | + | chr8_3:3778996-3779015 | None:intergenic | 25.0% |
| ! | TCAGGATAACAAAAGAAAAA+TGG | + | chr8_3:3779244-3779263 | None:intergenic | 25.0% |
| ! | AACAATGACAACATAACTAT+TGG | + | chr8_3:3779320-3779339 | None:intergenic | 25.0% |
| ! | TATATAATAAGTGCAAGTGA+TGG | + | chr8_3:3779743-3779762 | None:intergenic | 25.0% |
| ! | CACTTATTATATACAATGAG+AGG | - | chr8_3:3779750-3779769 | Msa1270410:intron | 25.0% |
| ! | AATATTCCAAGAAATCAGTT+TGG | + | chr8_3:3780839-3780858 | None:intergenic | 25.0% |
| ! | AAACATACATGTTTGGATTA+AGG | - | chr8_3:3780923-3780942 | Msa1270410:intron | 25.0% |
| !! | TTTTACATCTGGAGAAAAAA+TGG | + | chr8_3:3781665-3781684 | None:intergenic | 25.0% |
| !! | AATTGCAACAATTTTACATC+TGG | + | chr8_3:3781676-3781695 | None:intergenic | 25.0% |
| !!! | TTCCCAATATTTTAGATTGT+GGG | - | chr8_3:3781698-3781717 | Msa1270410:five_prime_UTR | 25.0% |
| !!! | TCCAACTTTTTAAGTAAGAA+AGG | - | chr8_3:3781722-3781741 | Msa1270410:five_prime_UTR | 25.0% |
| ! | TCCTTTCTTACTTAAAAAGT+TGG | + | chr8_3:3781726-3781745 | None:intergenic | 25.0% |
| ! | TCTGTTAACGTAATAGTATT+AGG | - | chr8_3:3781760-3781779 | Msa1270410:intron | 25.0% |
| !!! | TAGTGCTTTTTAACAAATAG+AGG | - | chr8_3:3781865-3781884 | Msa1270410:intron | 25.0% |
| !!! | AGTGCTTTTTAACAAATAGA+GGG | - | chr8_3:3781866-3781885 | Msa1270410:intron | 25.0% |
| ! | CAAGTAATGAAGAATTGATT+AGG | + | chr8_3:3782233-3782252 | None:intergenic | 25.0% |
| ! | TTAAATGTCTCATGTTCTAA+AGG | + | chr8_3:3782328-3782347 | None:intergenic | 25.0% |
| ! | GAAAATTCTCCAAAACAAAT+GGG | + | chr8_3:3782428-3782447 | None:intergenic | 25.0% |
| ! | TGAAAATTCTCCAAAACAAA+TGG | + | chr8_3:3782429-3782448 | None:intergenic | 25.0% |
| !!! | TTTGTTTTGGAGAATTTTCA+TGG | - | chr8_3:3782429-3782448 | Msa1270410:five_prime_UTR | 25.0% |
| !!! | TTGTTTTGGAGAATTTTCAT+GGG | - | chr8_3:3782430-3782449 | Msa1270410:five_prime_UTR | 25.0% |
| !! | TCATTTTGCTTAAGAAGTTT+CGG | - | chr8_3:3782951-3782970 | Msa1270410:intron | 25.0% |
| ! | ATGTGAATCATCAAAAAGTT+TGG | + | chr8_3:3783131-3783150 | None:intergenic | 25.0% |
| !! | ATGATTTGTGAAAATCTTCA+AGG | - | chr8_3:3783481-3783500 | Msa1270410:intron | 25.0% |
| ! | TTTGAATTTGATCTAGCATT+TGG | + | chr8_3:3783615-3783634 | None:intergenic | 25.0% |
| ! | TTGTTGTGTATAAGAAGAAT+CGG | - | chr8_3:3783782-3783801 | Msa1270410:five_prime_UTR | 25.0% |
| ! | TAAAAGCTGAACAAAACATA+TGG | + | chr8_3:3783960-3783979 | None:intergenic | 25.0% |
| ! | GAGAAAAATATGAAACACTA+AGG | + | chr8_3:3784058-3784077 | None:intergenic | 25.0% |
| CAAAACCATACAATCACAAA+AGG | - | chr8_3:3777952-3777971 | Msa1270410:three_prime_UTR | 30.0% | |
| TGACTATAGTTGAATCAGTA+AGG | - | chr8_3:3778211-3778230 | Msa1270410:three_prime_UTR | 30.0% | |
| ! | ACTTAACTTGGACTAAGTTT+GGG | - | chr8_3:3778280-3778299 | Msa1270410:exon | 30.0% |
| GAATTCTGAACATTATGATG+AGG | - | chr8_3:3778302-3778321 | Msa1270410:CDS | 30.0% | |
| CAACTCTATCATAAGGAATA+AGG | + | chr8_3:3778332-3778351 | None:intergenic | 30.0% | |
| ! | AAAGCATCAACTCTATCATA+AGG | + | chr8_3:3778339-3778358 | None:intergenic | 30.0% |
| ATGATGAATATCTTGAGTAC+AGG | - | chr8_3:3778454-3778473 | Msa1270410:CDS | 30.0% | |
| !! | TTGCGTGTTTAGTTTGTATA+TGG | - | chr8_3:3778603-3778622 | Msa1270410:CDS | 30.0% |
| TATATAGAGAGAAGACATGT+AGG | - | chr8_3:3778743-3778762 | Msa1270410:CDS | 30.0% | |
| AGTAAGTAGATTAGATCAGA+TGG | - | chr8_3:3778772-3778791 | Msa1270410:CDS | 30.0% | |
| GTAAGTAGATTAGATCAGAT+GGG | - | chr8_3:3778773-3778792 | Msa1270410:CDS | 30.0% | |
| TAAGTAGATTAGATCAGATG+GGG | - | chr8_3:3778774-3778793 | Msa1270410:CDS | 30.0% | |
| TATAAGAGAAACCATCAAGA+AGG | - | chr8_3:3778838-3778857 | Msa1270410:CDS | 30.0% | |
| AAGAAGGATCAAGAGATTAA+TGG | - | chr8_3:3778854-3778873 | Msa1270410:CDS | 30.0% | |
| AGAAGGATCAAGAGATTAAT+GGG | - | chr8_3:3778855-3778874 | Msa1270410:CDS | 30.0% | |
| !! | AAGAGATTAATGGGTTTGAT+AGG | - | chr8_3:3778864-3778883 | Msa1270410:CDS | 30.0% |
| !! | AGAGATTAATGGGTTTGATA+GGG | - | chr8_3:3778865-3778884 | Msa1270410:CDS | 30.0% |
| ! | TTCCCTAATGTTTTTCATGT+TGG | - | chr8_3:3778990-3779009 | Msa1270410:CDS | 30.0% |
| CTAATAACTTGAAGCTTAAG+TGG | - | chr8_3:3779078-3779097 | Msa1270410:intron | 30.0% | |
| ATGCTATGGATTCTAAATTC+AGG | + | chr8_3:3779262-3779281 | None:intergenic | 30.0% | |
| ACTAATTCACTAGTATGCTA+TGG | + | chr8_3:3779276-3779295 | None:intergenic | 30.0% | |
| TTAGTAGTCAGAAATCTGTT+AGG | - | chr8_3:3779373-3779392 | Msa1270410:intron | 30.0% | |
| AGAACATGATTGTATTCATG+AGG | + | chr8_3:3779488-3779507 | None:intergenic | 30.0% | |
| TTCAACATGACTAGAAATCT+GGG | + | chr8_3:3779547-3779566 | None:intergenic | 30.0% | |
| ATTCAACATGACTAGAAATC+TGG | + | chr8_3:3779548-3779567 | None:intergenic | 30.0% | |
| ACAATGTCCATGATATATCT+CGG | - | chr8_3:3779881-3779900 | Msa1270410:intron | 30.0% | |
| CAGATAACTATGATTCTCTT+AGG | + | chr8_3:3780280-3780299 | None:intergenic | 30.0% | |
| ACATGAAAAGATAACCAAGT+CGG | + | chr8_3:3780332-3780351 | None:intergenic | 30.0% | |
| ! | ACTTGGTTATCTTTTCATGT+TGG | - | chr8_3:3780332-3780351 | Msa1270410:intron | 30.0% |
| AAAACAAGTAGAGTGAACAA+GGG | + | chr8_3:3780364-3780383 | None:intergenic | 30.0% | |
| AAAAACAAGTAGAGTGAACA+AGG | + | chr8_3:3780365-3780384 | None:intergenic | 30.0% | |
| ! | CAGCTGATATTAATCTTTTG+AGG | - | chr8_3:3780536-3780555 | Msa1270410:intron | 30.0% |
| AGAAAGATCTAACCAATCTT+GGG | + | chr8_3:3780879-3780898 | None:intergenic | 30.0% | |
| GCACATAAAACATACATGTT+TGG | - | chr8_3:3780916-3780935 | Msa1270410:intron | 30.0% | |
| ! | ATTCACCTATTTTCTGTATC+CGG | + | chr8_3:3780964-3780983 | None:intergenic | 30.0% |
| TATCGGATATAGATACTTCT+AGG | - | chr8_3:3780998-3781017 | Msa1270410:intron | 30.0% | |
| ATACCTTTGAATAAACCTCA+GGG | + | chr8_3:3781350-3781369 | None:intergenic | 30.0% | |
| CAAAGGATGAATACAAAAGA+AGG | + | chr8_3:3781634-3781653 | None:intergenic | 30.0% | |
| ! | CTTCTTTTGTATTCATCCTT+TGG | - | chr8_3:3781632-3781651 | Msa1270410:five_prime_UTR | 30.0% |
| AAAAAATGGCTGAATACCAA+AGG | + | chr8_3:3781651-3781670 | None:intergenic | 30.0% | |
| !! | CTTCCCAATATTTTAGATTG+TGG | - | chr8_3:3781697-3781716 | Msa1270410:five_prime_UTR | 30.0% |
| ! | AGCCCACAATCTAAAATATT+GGG | + | chr8_3:3781703-3781722 | None:intergenic | 30.0% |
| GTTAACGTAATAGTATTAGG+CGG | - | chr8_3:3781763-3781782 | Msa1270410:intron | 30.0% | |
| !! | GTGCTTTTTAACAAATAGAG+GGG | - | chr8_3:3781867-3781886 | Msa1270410:intron | 30.0% |
| !! | TGCTTTTTAACAAATAGAGG+GGG | - | chr8_3:3781868-3781887 | Msa1270410:intron | 30.0% |
| GATTAGATTGTGAATGAGAA+AGG | + | chr8_3:3782170-3782189 | None:intergenic | 30.0% | |
| ! | AGGTTATTGCTCTCATTTTA+TGG | - | chr8_3:3782384-3782403 | Msa1270410:five_prime_UTR | 30.0% |
| !!! | TGTTTTGGAGAATTTTCATG+GGG | - | chr8_3:3782431-3782450 | Msa1270410:five_prime_UTR | 30.0% |
| ! | GTTCGAAATTTTGTGAAGTT+TGG | - | chr8_3:3782548-3782567 | Msa1270410:intron | 30.0% |
| TAATTCATCATCATCCATAG+AGG | + | chr8_3:3782593-3782612 | None:intergenic | 30.0% | |
| AAAACCCATAAGAGCAAATT+AGG | + | chr8_3:3782646-3782665 | None:intergenic | 30.0% | |
| !! | AATTTGCTCTTATGGGTTTT+TGG | - | chr8_3:3782646-3782665 | Msa1270410:intron | 30.0% |
| TTATTAATGTATCAAGGCCT+TGG | - | chr8_3:3782849-3782868 | Msa1270410:intron | 30.0% | |
| TTCTTAAGCAAAATGAAACC+AGG | + | chr8_3:3782947-3782966 | None:intergenic | 30.0% | |
| !! | CTTTTTGATGATTCACATCT+CGG | - | chr8_3:3783133-3783152 | Msa1270410:intron | 30.0% |
| TATAACCTTCTTTCACATTC+TGG | + | chr8_3:3783255-3783274 | None:intergenic | 30.0% | |
| TTTCATTCTGTGATTGTTCT+TGG | - | chr8_3:3783416-3783435 | Msa1270410:intron | 30.0% | |
| !! | AAGAGGTTTTAATGGATCTA+TGG | - | chr8_3:3783536-3783555 | Msa1270410:intron | 30.0% |
| !! | AGAGGTTTTAATGGATCTAT+GGG | - | chr8_3:3783537-3783556 | Msa1270410:intron | 30.0% |
| AATTTGATCTAGCATTTGGT+GGG | + | chr8_3:3783611-3783630 | None:intergenic | 30.0% | |
| ! | TAAACAATATGCCTCTGAAA+TGG | - | chr8_3:3783677-3783696 | Msa1270410:five_prime_UTR | 30.0% |
| !! | AAACAATATGCCTCTGAAAT+GGG | - | chr8_3:3783678-3783697 | Msa1270410:five_prime_UTR | 30.0% |
| AAATATCTCCAGAGATAGAA+TGG | - | chr8_3:3783911-3783930 | Msa1270410:five_prime_UTR | 30.0% | |
| TTATACCTGACAATACTTCT+AGG | - | chr8_3:3783977-3783996 | Msa1270410:intron | 30.0% | |
| TCAAATTAGAACAATGGAGA+TGG | + | chr8_3:3784141-3784160 | None:intergenic | 30.0% | |
| AGGACTTCAAATTAGAACAA+TGG | + | chr8_3:3784147-3784166 | None:intergenic | 30.0% | |
| AAGTAAACTAAGCACTTGAA+AGG | + | chr8_3:3784167-3784186 | None:intergenic | 30.0% | |
| ! | TTTCAAGTGCTTAGTTTACT+TGG | - | chr8_3:3784166-3784185 | Msa1270410:five_prime_UTR | 30.0% |
| TTCAAGTGCTTAGTTTACTT+GGG | - | chr8_3:3784167-3784186 | Msa1270410:five_prime_UTR | 30.0% | |
| TGGGAAAATATATCTTTCCA+TGG | - | chr8_3:3784186-3784205 | Msa1270410:five_prime_UTR | 30.0% | |
| !! | TGCAATGAAGGAATTTTTGG+TGG | + | chr8_3:3777920-3777939 | None:intergenic | 35.0% |
| ! | CATACCCTTTTGTGATTGTA+TGG | + | chr8_3:3777960-3777979 | None:intergenic | 35.0% |
| ! | GACTTAACTTGGACTAAGTT+TGG | - | chr8_3:3778279-3778298 | Msa1270410:exon | 35.0% |
| ATCATCCTTATACTCCTTCA+AGG | + | chr8_3:3778439-3778458 | None:intergenic | 35.0% | |
| TTCTACAAGGGTAAGTAACA+AGG | + | chr8_3:3778686-3778705 | None:intergenic | 35.0% | |
| AATCTCTTGATCCTTCTTGA+TGG | + | chr8_3:3778852-3778871 | None:intergenic | 35.0% | |
| TTCAGACAGCAAAAGGAAAA+TGG | + | chr8_3:3779026-3779045 | None:intergenic | 35.0% | |
| TTGAAACTTCAGACAGCAAA+AGG | + | chr8_3:3779033-3779052 | None:intergenic | 35.0% | |
| CAACATGATAAGACAAGCAT+TGG | + | chr8_3:3779124-3779143 | None:intergenic | 35.0% | |
| ATTAGTAATACGCACACGAT+CGG | - | chr8_3:3779290-3779309 | Msa1270410:intron | 35.0% | |
| TCATGAGGTAAAAGCTCATT+AGG | + | chr8_3:3779473-3779492 | None:intergenic | 35.0% | |
| ! | CTCTCTCATGAGTATCATTT+TGG | - | chr8_3:3779512-3779531 | Msa1270410:intron | 35.0% |
| ! | ACTAGAAATCTGGGATGATA+GGG | + | chr8_3:3779538-3779557 | None:intergenic | 35.0% |
| ! | GAATTTTGTTCTCTGTCTGA+AGG | - | chr8_3:3779564-3779583 | Msa1270410:intron | 35.0% |
| TCATTTGGCCCAGAAAATTA+TGG | - | chr8_3:3779596-3779615 | Msa1270410:intron | 35.0% | |
| CATTTGGCCCAGAAAATTAT+GGG | - | chr8_3:3779597-3779616 | Msa1270410:intron | 35.0% | |
| ATTTGGCCCAGAAAATTATG+GGG | - | chr8_3:3779598-3779617 | Msa1270410:intron | 35.0% | |
| ACGTTTGACAACAAAATGAC+AGG | + | chr8_3:3779708-3779727 | None:intergenic | 35.0% | |
| CATTCCAGAAGAGAATATCT+TGG | - | chr8_3:3779904-3779923 | Msa1270410:intron | 35.0% | |
| TTCTCCAAGATATTCTCTTC+TGG | + | chr8_3:3779911-3779930 | None:intergenic | 35.0% | |
| ATCTTGGAGAAACATATCGA+AGG | - | chr8_3:3779920-3779939 | Msa1270410:intron | 35.0% | |
| TCTTGGAGAAACATATCGAA+GGG | - | chr8_3:3779921-3779940 | Msa1270410:intron | 35.0% | |
| TTTGGATCCCTAAGATGAAA+GGG | + | chr8_3:3780132-3780151 | None:intergenic | 35.0% | |
| ! | TATTTTCAATCAACCCGACT+TGG | - | chr8_3:3780315-3780334 | Msa1270410:intron | 35.0% |
| CATGAAAAGATAACCAAGTC+GGG | + | chr8_3:3780331-3780350 | None:intergenic | 35.0% | |
| TTAAGCCATTTAGACACATC+AGG | + | chr8_3:3780445-3780464 | None:intergenic | 35.0% | |
| CTGTAAAAGCAAACAACGAA+AGG | + | chr8_3:3780621-3780640 | None:intergenic | 35.0% | |
| GAATACGCCATAGTGAAAAT+AGG | + | chr8_3:3780665-3780684 | None:intergenic | 35.0% | |
| GAGGAAATGCAATAATATCG+AGG | - | chr8_3:3780710-3780729 | Msa1270410:intron | 35.0% | |
| GACAATTGTGTACAGCATTT+GGG | - | chr8_3:3780761-3780780 | Msa1270410:intron | 35.0% | |
| ACAATTGTGTACAGCATTTG+GGG | - | chr8_3:3780762-3780781 | Msa1270410:intron | 35.0% | |
| ! | TGTTGACCAAACTGATTTCT+TGG | - | chr8_3:3780830-3780849 | Msa1270410:intron | 35.0% |
| GAGAAAGATCTAACCAATCT+TGG | + | chr8_3:3780880-3780899 | None:intergenic | 35.0% | |
| ! | TTCACCTATTTTCTGTATCC+GGG | + | chr8_3:3780963-3780982 | None:intergenic | 35.0% |
| !! | AGATACTTCTAGGATATGCT+TGG | - | chr8_3:3781008-3781027 | Msa1270410:intron | 35.0% |
| ACTTCAATGGGTCTCATAAT+AGG | - | chr8_3:3781192-3781211 | Msa1270410:intron | 35.0% | |
| TACCTTTGAATAAACCTCAG+GGG | + | chr8_3:3781349-3781368 | None:intergenic | 35.0% | |
| GATACCTTTGAATAAACCTC+AGG | + | chr8_3:3781351-3781370 | None:intergenic | 35.0% | |
| ! | AAGGTATCACACTGTTAACA+TGG | - | chr8_3:3781363-3781382 | Msa1270410:five_prime_UTR | 35.0% |
| ATTTGAATGGGTCTTGATGA+CGG | + | chr8_3:3781429-3781448 | None:intergenic | 35.0% | |
| !! | GATGGGTTATGGATTTGAAT+GGG | + | chr8_3:3781441-3781460 | None:intergenic | 35.0% |
| CTTTCACATACAGTGACTAT+TGG | + | chr8_3:3781485-3781504 | None:intergenic | 35.0% | |
| ATTTCCCACAAACCTACAAA+CGG | - | chr8_3:3781583-3781602 | Msa1270410:five_prime_UTR | 35.0% | |
| ! | GAGCCCACAATCTAAAATAT+TGG | + | chr8_3:3781704-3781723 | None:intergenic | 35.0% |
| AATAATAAATGTCTAGGGGG+AGG | - | chr8_3:3781841-3781860 | Msa1270410:intron | 35.0% | |
| ATACATTTGAACAGACCTCA+GGG | - | chr8_3:3781895-3781914 | Msa1270410:five_prime_UTR | 35.0% | |
| GTGAATCAAAAACATCTCAG+AGG | + | chr8_3:3782206-3782225 | None:intergenic | 35.0% | |
| ! | TTTATGCGTCCCATTTGTTT+TGG | - | chr8_3:3782416-3782435 | Msa1270410:five_prime_UTR | 35.0% |
| !!! | GTTTTGGAGAATTTTCATGG+GGG | - | chr8_3:3782432-3782451 | Msa1270410:five_prime_UTR | 35.0% |
| AATGCTGACGGTTATATCTA+TGG | - | chr8_3:3782508-3782527 | Msa1270410:five_prime_UTR | 35.0% | |
| AAAATCTTCCAACTCCTCTA+TGG | - | chr8_3:3782576-3782595 | Msa1270410:intron | 35.0% | |
| CATAAGAGCAAATTAGGCAT+CGG | + | chr8_3:3782640-3782659 | None:intergenic | 35.0% | |
| !! | GATGCCTAATTTGCTCTTAT+GGG | - | chr8_3:3782639-3782658 | Msa1270410:intron | 35.0% |
| CAATCATTGGTCAAATCTGA+TGG | - | chr8_3:3782736-3782755 | Msa1270410:intron | 35.0% | |
| ATTACTATAGGTGGATCACA+TGG | + | chr8_3:3782807-3782826 | None:intergenic | 35.0% | |
| TTCAAGATACAATAAGGCCA+AGG | + | chr8_3:3782869-3782888 | None:intergenic | 35.0% | |
| AACAATGAGAAATTTGCCAC+TGG | - | chr8_3:3783054-3783073 | Msa1270410:intron | 35.0% | |
| !! | GTTTGGCTTTCAGTTTAACA+TGG | + | chr8_3:3783114-3783133 | None:intergenic | 35.0% |
| GCAACTCAGTTGTTAACTTA+TGG | + | chr8_3:3783186-3783205 | None:intergenic | 35.0% | |
| TCTTTCCAGAATGTGAAAGA+AGG | - | chr8_3:3783247-3783266 | Msa1270410:intron | 35.0% | |
| GTTATATTGCTTCTACGTCA+TGG | - | chr8_3:3783269-3783288 | Msa1270410:intron | 35.0% | |
| ! | AACACACATAGTTTGGAATC+CGG | - | chr8_3:3783384-3783403 | Msa1270410:intron | 35.0% |
| CAGAATGAAAATTCAGATCC+CGG | + | chr8_3:3783406-3783425 | None:intergenic | 35.0% | |
| ! | GTCAATCGTCAATGTCTTTT+CGG | - | chr8_3:3783506-3783525 | Msa1270410:intron | 35.0% |
| !! | GTCGTTTGAAGAGGTTTTAA+TGG | - | chr8_3:3783528-3783547 | Msa1270410:intron | 35.0% |
| !! | GAGGTTTTAATGGATCTATG+GGG | - | chr8_3:3783538-3783557 | Msa1270410:intron | 35.0% |
| GAATTTGATCTAGCATTTGG+TGG | + | chr8_3:3783612-3783631 | None:intergenic | 35.0% | |
| !! | TTCTTTGAAACCCATTTCAG+AGG | + | chr8_3:3783691-3783710 | None:intergenic | 35.0% |
| AAGAAACGCAGAACCAATAT+TGG | - | chr8_3:3783706-3783725 | Msa1270410:five_prime_UTR | 35.0% | |
| TGAAGATCGTTTGCCAATAT+TGG | + | chr8_3:3783722-3783741 | None:intergenic | 35.0% | |
| TGGCAAACGATCTTCAATTT+CGG | - | chr8_3:3783726-3783745 | Msa1270410:five_prime_UTR | 35.0% | |
| ! | CAACAACACTTTTCGTGTTA+CGG | + | chr8_3:3783768-3783787 | None:intergenic | 35.0% |
| TTGTGTATAAGAAGAATCGG+AGG | - | chr8_3:3783785-3783804 | Msa1270410:five_prime_UTR | 35.0% | |
| TAACTCTGCTTAGTGAAAAG+TGG | - | chr8_3:3783866-3783885 | Msa1270410:five_prime_UTR | 35.0% | |
| GAGGAATCAAAAAGCAATTC+CGG | - | chr8_3:3783933-3783952 | Msa1270410:five_prime_UTR | 35.0% | |
| !!! | GAAGGAATTTTTGGTGGTGA+TGG | + | chr8_3:3777914-3777933 | None:intergenic | 40.0% |
| ! | CGCTGCAATGAAGGAATTTT+TGG | + | chr8_3:3777923-3777942 | None:intergenic | 40.0% |
| CAGAAAACTCTTCCTCAGAT+GGG | + | chr8_3:3778254-3778273 | None:intergenic | 40.0% | |
| !! | TTTCTGCTGCTGACTTAACT+TGG | - | chr8_3:3778268-3778287 | Msa1270410:exon | 40.0% |
| ATATCGAGAGAGGAAGGAAA+CGG | - | chr8_3:3778403-3778422 | Msa1270410:CDS | 40.0% | |
| ! | TGGTACCTTGAAGGAGTATA+AGG | - | chr8_3:3778431-3778450 | Msa1270410:CDS | 40.0% |
| GATTCTTGTTAACTCGGCTT+AGG | - | chr8_3:3778711-3778730 | Msa1270410:CDS | 40.0% | |
| ! | TTAACTCGGCTTAGGTTGTT+TGG | - | chr8_3:3778719-3778738 | Msa1270410:CDS | 40.0% |
| ! | TAACTCGGCTTAGGTTGTTT+GGG | - | chr8_3:3778720-3778739 | Msa1270410:CDS | 40.0% |
| TTAGTAATACGCACACGATC+GGG | - | chr8_3:3779291-3779310 | Msa1270410:intron | 40.0% | |
| GTCAGAAATCTGTTAGGAGT+TGG | - | chr8_3:3779379-3779398 | Msa1270410:intron | 40.0% | |
| ! | GACTAGAAATCTGGGATGAT+AGG | + | chr8_3:3779539-3779558 | None:intergenic | 40.0% |
| CCAATAGCATCTCTATCAAG+TGG | + | chr8_3:3779812-3779831 | None:intergenic | 40.0% | |
| CCACTTGATAGAGATGCTAT+TGG | - | chr8_3:3779809-3779828 | Msa1270410:intron | 40.0% | |
| !! | ATGGAATCTTTTTGGCACCT+GGG | + | chr8_3:3779835-3779854 | None:intergenic | 40.0% |
| !! | TATGGAATCTTTTTGGCACC+TGG | + | chr8_3:3779836-3779855 | None:intergenic | 40.0% |
| TGGAATGCCGAGATATATCA+TGG | + | chr8_3:3779891-3779910 | None:intergenic | 40.0% | |
| !! | AGGCTATTGACTTGTGCATT+TGG | + | chr8_3:3779965-3779984 | None:intergenic | 40.0% |
| TGTGAACATACTGAGAAGCA+AGG | + | chr8_3:3779985-3780004 | None:intergenic | 40.0% | |
| TTCTCAGTATGTTCACAAGC+TGG | - | chr8_3:3779988-3780007 | Msa1270410:intron | 40.0% | |
| TCTCAGTATGTTCACAAGCT+GGG | - | chr8_3:3779989-3780008 | Msa1270410:intron | 40.0% | |
| AGCTGGGCATGATTATCAAA+AGG | - | chr8_3:3780005-3780024 | Msa1270410:intron | 40.0% | |
| TATTTCGTTCAACCCACATG+CGG | + | chr8_3:3780069-3780088 | None:intergenic | 40.0% | |
| AGTCAGACCCTTTCATCTTA+GGG | - | chr8_3:3780122-3780141 | Msa1270410:intron | 40.0% | |
| GTTTGGATCCCTAAGATGAA+AGG | + | chr8_3:3780133-3780152 | None:intergenic | 40.0% | |
| TCTTAGGGATCCAAACAGAA+TGG | - | chr8_3:3780137-3780156 | Msa1270410:intron | 40.0% | |
| ! | CTGCAACAAATGGTTCGTTT+TGG | - | chr8_3:3780163-3780182 | Msa1270410:intron | 40.0% |
| CAAAGCCTGATGTGTCTAAA+TGG | - | chr8_3:3780437-3780456 | Msa1270410:intron | 40.0% | |
| ! | GTCCTGTCCTATTTTCACTA+TGG | - | chr8_3:3780655-3780674 | Msa1270410:intron | 40.0% |
| TATGGCGTATTCGTAGATCA+TGG | - | chr8_3:3780673-3780692 | Msa1270410:intron | 40.0% | |
| GTATTCGTAGATCATGGCTA+AGG | - | chr8_3:3780679-3780698 | Msa1270410:intron | 40.0% | |
| CATGGCTAAGGAATATTGTG+AGG | - | chr8_3:3780691-3780710 | Msa1270410:intron | 40.0% | |
| !! | GCGAGATTTTTAAGCGTCTA+GGG | - | chr8_3:3780739-3780758 | Msa1270410:intron | 40.0% |
| GGACAATTGTGTACAGCATT+TGG | - | chr8_3:3780760-3780779 | Msa1270410:intron | 40.0% | |
| ATCCAGCATAAGTTGTTCCA+AGG | + | chr8_3:3780808-3780827 | None:intergenic | 40.0% | |
| ! | TGGAATATTTCAGAGTGTCC+TGG | - | chr8_3:3780850-3780869 | Msa1270410:intron | 40.0% |
| ! | GGAATATTTCAGAGTGTCCT+GGG | - | chr8_3:3780851-3780870 | Msa1270410:intron | 40.0% |
| ATGTGCATGCAAGAGAAAAG+AGG | + | chr8_3:3780902-3780921 | None:intergenic | 40.0% | |
| ! | CTACCTTTTAGCGATATGCA+CGG | - | chr8_3:3781225-3781244 | Msa1270410:intron | 40.0% |
| ! | TACCTTTTAGCGATATGCAC+GGG | - | chr8_3:3781226-3781245 | Msa1270410:intron | 40.0% |
| !! | GGATGGGTTATGGATTTGAA+TGG | + | chr8_3:3781442-3781461 | None:intergenic | 40.0% |
| AGTCACTGTATGTGAAAGCT+AGG | - | chr8_3:3781487-3781506 | Msa1270410:intron | 40.0% | |
| GTTTGTAGGTTTGTGGGAAA+TGG | + | chr8_3:3781584-3781603 | None:intergenic | 40.0% | |
| ACAACCGTTTGTAGGTTTGT+GGG | + | chr8_3:3781590-3781609 | None:intergenic | 40.0% | |
| GATACATTTGAACAGACCTC+AGG | - | chr8_3:3781894-3781913 | Msa1270410:five_prime_UTR | 40.0% | |
| AATTACTTTGACCTTCCCTG+AGG | + | chr8_3:3781913-3781932 | None:intergenic | 40.0% | |
| !! | TAATGGTGGATTATAGGGTG+AGG | - | chr8_3:3782025-3782044 | Msa1270410:five_prime_UTR | 40.0% |
| !! | AATGGTGGATTATAGGGTGA+GGG | - | chr8_3:3782026-3782045 | Msa1270410:five_prime_UTR | 40.0% |
| ! | TCTCAGAGGATTTTGTCTCA+AGG | + | chr8_3:3782192-3782211 | None:intergenic | 40.0% |
| ! | ATTTTCATGGGGGTAGCATT+TGG | - | chr8_3:3782442-3782461 | Msa1270410:five_prime_UTR | 40.0% |
| ATCATCATCCATAGAGGAGT+TGG | + | chr8_3:3782587-3782606 | None:intergenic | 40.0% | |
| !! | AATTAGGCATCGGAAACATC+AGG | + | chr8_3:3782630-3782649 | None:intergenic | 40.0% |
| !! | CGATGCCTAATTTGCTCTTA+TGG | - | chr8_3:3782638-3782657 | Msa1270410:intron | 40.0% |
| !!! | GGGTTTTTGGTGATGATGAT+AGG | - | chr8_3:3782659-3782678 | Msa1270410:intron | 40.0% |
| ! | TTTTCTCTGTTCCACTGATG+AGG | - | chr8_3:3782763-3782782 | Msa1270410:intron | 40.0% |
| TTTCTCTGTTCCACTGATGA+GGG | - | chr8_3:3782764-3782783 | Msa1270410:intron | 40.0% | |
| TCAATTAAGTCCCTCATCAG+TGG | + | chr8_3:3782777-3782796 | None:intergenic | 40.0% | |
| AAAATTTCCCGTATCCGCAT+TGG | - | chr8_3:3782894-3782913 | Msa1270410:intron | 40.0% | |
| AAACCAGGATATGTAGTTGC+TGG | + | chr8_3:3782932-3782951 | None:intergenic | 40.0% | |
| ATTTCTGCACAACAGAGGAA+AGG | + | chr8_3:3783025-3783044 | None:intergenic | 40.0% | |
| GGCTTTCAGTTTAACATGGT+AGG | + | chr8_3:3783110-3783129 | None:intergenic | 40.0% | |
| ! | GTTTTTCTTGCTCGCAACTT+TGG | + | chr8_3:3783356-3783375 | None:intergenic | 40.0% |
| GCAGCTTAACACACATAGTT+TGG | - | chr8_3:3783377-3783396 | Msa1270410:intron | 40.0% | |
| ! | ACACACATAGTTTGGAATCC+GGG | - | chr8_3:3783385-3783404 | Msa1270410:intron | 40.0% |
| GATTGTTCTTGGTCATTGCA+TGG | - | chr8_3:3783427-3783446 | Msa1270410:intron | 40.0% | |
| TGTATAAGAAGAATCGGAGG+CGG | - | chr8_3:3783788-3783807 | Msa1270410:five_prime_UTR | 40.0% | |
| TATCTCCAGAGATAGAATGG+AGG | - | chr8_3:3783914-3783933 | Msa1270410:five_prime_UTR | 40.0% | |
| TGATTCCTCCATTCTATCTC+TGG | + | chr8_3:3783922-3783941 | None:intergenic | 40.0% | |
| GCTGAACAAAACATATGGAC+CGG | + | chr8_3:3783955-3783974 | None:intergenic | 40.0% | |
| !! | GATCACCTAGAAGTATTGTC+AGG | + | chr8_3:3783985-3784004 | None:intergenic | 40.0% |
| TTTAGGCTAGCATGTGATTG+TGG | + | chr8_3:3784088-3784107 | None:intergenic | 40.0% | |
| !!! | GAGTGTTGTCGTTTTGGTGA+CGG | + | chr8_3:3777879-3777898 | None:intergenic | 45.0% |
| !!! | CGTGTAGAGTGTTGTCGTTT+TGG | + | chr8_3:3777885-3777904 | None:intergenic | 45.0% |
| TCGAATTTGCGCTGCAATGA+AGG | + | chr8_3:3777932-3777951 | None:intergenic | 45.0% | |
| GCAGAAAACTCTTCCTCAGA+TGG | + | chr8_3:3778255-3778274 | None:intergenic | 45.0% | |
| CAAATGTGTTGTGTCCGACT+CGG | - | chr8_3:3778376-3778395 | Msa1270410:CDS | 45.0% | |
| CTCTCGATATGAAACCGAGT+CGG | + | chr8_3:3778393-3778412 | None:intergenic | 45.0% | |
| ACTCGGTTTCATATCGAGAG+AGG | - | chr8_3:3778393-3778412 | Msa1270410:CDS | 45.0% | |
| GGTTTCATATCGAGAGAGGA+AGG | - | chr8_3:3778397-3778416 | Msa1270410:CDS | 45.0% | |
| !! | AGAGGAAGGAAACGGACTAT+TGG | - | chr8_3:3778411-3778430 | Msa1270410:CDS | 45.0% |
| ! | ACGGACTATTGGTACCTTGA+AGG | - | chr8_3:3778422-3778441 | Msa1270410:CDS | 45.0% |
| GGGAGTAGTCAAATCACTAG+TGG | - | chr8_3:3778794-3778813 | Msa1270410:CDS | 45.0% | |
| AGTCAAATCACTAGTGGCAG+AGG | - | chr8_3:3778800-3778819 | Msa1270410:CDS | 45.0% | |
| AAATCACTAGTGGCAGAGGA+AGG | - | chr8_3:3778804-3778823 | Msa1270410:CDS | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGA+GGG | + | chr8_3:3778940-3778959 | None:intergenic | 45.0% |
| ! | TCAAGCCTTATCCCACTAAG+AGG | + | chr8_3:3778941-3778960 | None:intergenic | 45.0% |
| AAGTGGTCATGTGCACAATC+AGG | - | chr8_3:3779095-3779114 | Msa1270410:intron | 45.0% | |
| ! | TGTTCTCTGTCTGAAGGTAC+TGG | - | chr8_3:3779570-3779589 | Msa1270410:intron | 45.0% |
| !! | TGAAGGTACTGGTGCTCATT+TGG | - | chr8_3:3779581-3779600 | Msa1270410:intron | 45.0% |
| ! | CACCCTCCCCATAATTTTCT+GGG | + | chr8_3:3779607-3779626 | None:intergenic | 45.0% |
| GTGGAGAGATACTACCTAGT+CGG | - | chr8_3:3779624-3779643 | Msa1270410:intron | 45.0% | |
| TTGAGTCGATATCTCCGACT+AGG | + | chr8_3:3779641-3779660 | None:intergenic | 45.0% | |
| CTGCTAGACCTCAATCAATG+CGG | - | chr8_3:3779675-3779694 | Msa1270410:intron | 45.0% | |
| TGCTAGACCTCAATCAATGC+GGG | - | chr8_3:3779676-3779695 | Msa1270410:intron | 45.0% | |
| AGGCGTCATGTTAATACGTC+TGG | - | chr8_3:3779770-3779789 | Msa1270410:intron | 45.0% | |
| !!! | ACGTCTGGTTTTATCTGCCA+TGG | - | chr8_3:3779785-3779804 | Msa1270410:intron | 45.0% |
| CATCTCTATCAAGTGGTCCA+TGG | + | chr8_3:3779805-3779824 | None:intergenic | 45.0% | |
| GAAGGGATTGAGCGATATTG+TGG | - | chr8_3:3779938-3779957 | Msa1270410:intron | 45.0% | |
| CAAAAGGTCTACTCATGAGC+TGG | - | chr8_3:3780021-3780040 | Msa1270410:intron | 45.0% | |
| GTCTACTCATGAGCTGGATT+TGG | - | chr8_3:3780027-3780046 | Msa1270410:intron | 45.0% | |
| GAGTCAGACCCTTTCATCTT+AGG | - | chr8_3:3780121-3780140 | Msa1270410:intron | 45.0% | |
| AGAATGGCAGCTGCAACAAA+TGG | - | chr8_3:3780153-3780172 | Msa1270410:intron | 45.0% | |
| !! | AATCCACTGACTTTCCATCC+AGG | + | chr8_3:3780499-3780518 | None:intergenic | 45.0% |
| CGCCATAGTGAAAATAGGAC+AGG | + | chr8_3:3780660-3780679 | None:intergenic | 45.0% | |
| !! | CGCGAGATTTTTAAGCGTCT+AGG | - | chr8_3:3780738-3780757 | Msa1270410:intron | 45.0% |
| ATTGTGTACAGCATTTGGGG+AGG | - | chr8_3:3780765-3780784 | Msa1270410:intron | 45.0% | |
| CACAAATACGTCACTTGCCT+TGG | - | chr8_3:3780788-3780807 | Msa1270410:intron | 45.0% | |
| TGCCTTGGAACAACTTATGC+TGG | - | chr8_3:3780803-3780822 | Msa1270410:intron | 45.0% | |
| AAGGCATATTATGCAGAGCC+CGG | - | chr8_3:3780942-3780961 | Msa1270410:intron | 45.0% | |
| AGAGCCCGGATACAGAAAAT+AGG | - | chr8_3:3780956-3780975 | Msa1270410:intron | 45.0% | |
| ACTGCGAGATACGACTTCAA+TGG | - | chr8_3:3781179-3781198 | Msa1270410:intron | 45.0% | |
| CTGCGAGATACGACTTCAAT+GGG | - | chr8_3:3781180-3781199 | Msa1270410:intron | 45.0% | |
| ATCCCGTGCATATCGCTAAA+AGG | + | chr8_3:3781231-3781250 | None:intergenic | 45.0% | |
| AATTACATTGACCTCCCCTG+AGG | - | chr8_3:3781332-3781351 | Msa1270410:five_prime_UTR | 45.0% | |
| CTTTGAATAAACCTCAGGGG+AGG | + | chr8_3:3781346-3781365 | None:intergenic | 45.0% | |
| CTCCCCTGAGGTTTATTCAA+AGG | - | chr8_3:3781344-3781363 | Msa1270410:five_prime_UTR | 45.0% | |
| !!! | CTTGATGACGGTTTTGCTCT+TGG | + | chr8_3:3781417-3781436 | None:intergenic | 45.0% |
| !! | AGAATGCTCTGGATGGGTTA+TGG | + | chr8_3:3781452-3781471 | None:intergenic | 45.0% |
| ! | TCTCACAGAATGCTCTGGAT+GGG | + | chr8_3:3781458-3781477 | None:intergenic | 45.0% |
| ! | TTCTCACAGAATGCTCTGGA+TGG | + | chr8_3:3781459-3781478 | None:intergenic | 45.0% |
| GGAAATGGCAGAGGTTTAAC+TGG | + | chr8_3:3781569-3781588 | None:intergenic | 45.0% | |
| CACAACCGTTTGTAGGTTTG+TGG | + | chr8_3:3781591-3781610 | None:intergenic | 45.0% | |
| GCTATCTCACAACCGTTTGT+AGG | + | chr8_3:3781598-3781617 | None:intergenic | 45.0% | |
| ATTTGAACAGACCTCAGGGA+AGG | - | chr8_3:3781899-3781918 | Msa1270410:five_prime_UTR | 45.0% | |
| !! | TTTATTTTCCCCTGCTCCAC+CGG | + | chr8_3:3782069-3782088 | None:intergenic | 45.0% |
| GATTGTGCGTGAGAATGTGT+AGG | + | chr8_3:3782143-3782162 | None:intergenic | 45.0% | |
| ATAGGTGGATCACATGGTGA+GGG | + | chr8_3:3782801-3782820 | None:intergenic | 45.0% | |
| TATAGGTGGATCACATGGTG+AGG | + | chr8_3:3782802-3782821 | None:intergenic | 45.0% | |
| AACAGAGGAAAGGAAGGGTA+AGG | + | chr8_3:3783015-3783034 | None:intergenic | 45.0% | |
| TGCACAACAGAGGAAAGGAA+GGG | + | chr8_3:3783020-3783039 | None:intergenic | 45.0% | |
| TCCTCTGTTGTGCAGAAATG+TGG | - | chr8_3:3783026-3783045 | Msa1270410:intron | 45.0% | |
| CTGAGTTGCATTCAAGCTAC+TGG | - | chr8_3:3783197-3783216 | Msa1270410:intron | 45.0% | |
| ! | AGTCGGGAATTTCAAGTGCT+CGG | + | chr8_3:3783297-3783316 | None:intergenic | 45.0% |
| ACTTGAAATTCCCGACTCTG+CGG | - | chr8_3:3783300-3783319 | Msa1270410:intron | 45.0% | |
| ! | GAGGCGGTTTTTATTGTCCA+AGG | + | chr8_3:3783329-3783348 | None:intergenic | 45.0% |
| ! | CCTTGATGACATGCTTGCAA+AGG | + | chr8_3:3783456-3783475 | None:intergenic | 45.0% |
| CCTTTGCAAGCATGTCATCA+AGG | - | chr8_3:3783453-3783472 | Msa1270410:intron | 45.0% | |
| ! | GTCTTTTCGGTCGTTTGAAG+AGG | - | chr8_3:3783519-3783538 | Msa1270410:intron | 45.0% |
| AACGCAAACGAATCGTCAAC+TGG | + | chr8_3:3783568-3783587 | None:intergenic | 45.0% | |
| AGTTGACGATTCGTTTGCGT+TGG | - | chr8_3:3783567-3783586 | Msa1270410:intron | 45.0% | |
| GTTTGCGTTGGACTTGTCAT+TGG | - | chr8_3:3783579-3783598 | Msa1270410:intron | 45.0% | |
| TCAATTTCGGCAACTCCTTC+TGG | - | chr8_3:3783739-3783758 | Msa1270410:five_prime_UTR | 45.0% | |
| TTCGTGTTACGGTTACCAGA+AGG | + | chr8_3:3783757-3783776 | None:intergenic | 45.0% | |
| !!! | AAGATATATTATTATTTTAA+GGG | + | chr8_3:3781938-3781957 | None:intergenic | 5.0% |
| !!! | AAAGATATATTATTATTTTA+AGG | + | chr8_3:3781939-3781958 | None:intergenic | 5.0% |
| TCCTTTGCAAGACCCATCTG+AGG | - | chr8_3:3778239-3778258 | Msa1270410:three_prime_UTR | 50.0% | |
| TCCTCAGATGGGTCTTGCAA+AGG | + | chr8_3:3778243-3778262 | None:intergenic | 50.0% | |
| ATGTAGCCGACCCTCTTAGT+GGG | - | chr8_3:3778927-3778946 | Msa1270410:CDS | 50.0% | |
| CCTTATCCCACTAAGAGGGT+CGG | + | chr8_3:3778936-3778955 | None:intergenic | 50.0% | |
| TGGCCCAGAAAATTATGGGG+AGG | - | chr8_3:3779601-3779620 | Msa1270410:intron | 50.0% | |
| GGCCCAGAAAATTATGGGGA+GGG | - | chr8_3:3779602-3779621 | Msa1270410:intron | 50.0% | |
| ! | CCACCCTCCCCATAATTTTC+TGG | + | chr8_3:3779608-3779627 | None:intergenic | 50.0% |
| CCAGAAAATTATGGGGAGGG+TGG | - | chr8_3:3779605-3779624 | Msa1270410:intron | 50.0% | |
| GCTAGACCTCAATCAATGCG+GGG | - | chr8_3:3779677-3779696 | Msa1270410:intron | 50.0% | |
| !! | GTACAACCCCGCATTGATTG+AGG | + | chr8_3:3779686-3779705 | None:intergenic | 50.0% |
| GATAGAGATGCTATTGGCCC+AGG | - | chr8_3:3779815-3779834 | Msa1270410:intron | 50.0% | |
| ATCAAGCTAGCATCCGCATG+TGG | - | chr8_3:3780053-3780072 | Msa1270410:intron | 50.0% | |
| TCAAGCTAGCATCCGCATGT+GGG | - | chr8_3:3780054-3780073 | Msa1270410:intron | 50.0% | |
| GTTGCAGCTGCCATTCTGTT+TGG | + | chr8_3:3780150-3780169 | None:intergenic | 50.0% | |
| GTTGCTGCAGACTCATCGTT+TGG | - | chr8_3:3780199-3780218 | Msa1270410:intron | 50.0% | |
| AACATGCACTTCCTGTCGCA+TGG | - | chr8_3:3780395-3780414 | Msa1270410:intron | 50.0% | |
| CGTGTAATGATCCATGCGAC+AGG | + | chr8_3:3780409-3780428 | None:intergenic | 50.0% | |
| GCTGTTCTCACAGAATGCTC+TGG | + | chr8_3:3781463-3781482 | None:intergenic | 50.0% | |
| CACGCAAAGCTTCTGTGAAC+AGG | - | chr8_3:3781535-3781554 | Msa1270410:intron | 50.0% | |
| AGGTTTGTGGGAAATGGCAG+AGG | + | chr8_3:3781578-3781597 | None:intergenic | 50.0% | |
| GGCGGAGCAAAAAGTGAAAG+CGG | - | chr8_3:3781781-3781800 | Msa1270410:intron | 50.0% | |
| GGAGCAAAAAGTGAAAGCGG+TGG | - | chr8_3:3781784-3781803 | Msa1270410:intron | 50.0% | |
| GGCTCAATTAAGTCCCTCAC+CGG | - | chr8_3:3782047-3782066 | Msa1270410:five_prime_UTR | 50.0% | |
| TCAATTAAGTCCCTCACCGG+TGG | - | chr8_3:3782050-3782069 | Msa1270410:five_prime_UTR | 50.0% | |
| GGATATGTAGTTGCTGGCAC+TGG | + | chr8_3:3782926-3782945 | None:intergenic | 50.0% | |
| GTGCCAGCAACTACATATCC+TGG | - | chr8_3:3782926-3782945 | Msa1270410:intron | 50.0% | |
| CTGCACAACAGAGGAAAGGA+AGG | + | chr8_3:3783021-3783040 | None:intergenic | 50.0% | |
| GCCACATTTCTGCACAACAG+AGG | + | chr8_3:3783030-3783049 | None:intergenic | 50.0% | |
| AAATTTGCCACTGGCAAGCC+AGG | - | chr8_3:3783063-3783082 | Msa1270410:intron | 50.0% | |
| GTAGGCTTCTAATGCTCCAG+AGG | + | chr8_3:3783092-3783111 | None:intergenic | 50.0% | |
| ! | GAGCGCTGCAAAGAGTAGAT+TGG | - | chr8_3:3783155-3783174 | Msa1270410:intron | 50.0% |
| TCGCAACTTTGGCAAAGAGG+CGG | + | chr8_3:3783345-3783364 | None:intergenic | 50.0% | |
| TGCTCGCAACTTTGGCAAAG+AGG | + | chr8_3:3783348-3783367 | None:intergenic | 50.0% | |
| ! | CGTTGGACTTGTCATTGGCT+TGG | - | chr8_3:3783584-3783603 | Msa1270410:intron | 50.0% |
| TCACTCCTGAGACAGAGTAG+TGG | - | chr8_3:3784003-3784022 | Msa1270410:intron | 50.0% | |
| TCCTGAGACAGAGTAGTGGT+CGG | - | chr8_3:3784007-3784026 | Msa1270410:intron | 50.0% | |
| CACTAAGAGGGTCGGCTACA+TGG | + | chr8_3:3778928-3778947 | None:intergenic | 55.0% | |
| CATGTAGCCGACCCTCTTAG+TGG | - | chr8_3:3778926-3778945 | Msa1270410:CDS | 55.0% | |
| CCGACCCTCTTAGTGGGATA+AGG | - | chr8_3:3778933-3778952 | Msa1270410:CDS | 55.0% | |
| GTTGCTGCTGCTGCTGTTGT+TGG | - | chr8_3:3778963-3778982 | Msa1270410:CDS | 55.0% | |
| CAGGCTCAACACTACGAGCT+CGG | + | chr8_3:3780480-3780499 | None:intergenic | 55.0% | |
| ! | CTCGTAGTGTTGAGCCTGGA+TGG | - | chr8_3:3780482-3780501 | Msa1270410:intron | 55.0% |
| GAGCCTGGATGGAAAGTCAG+TGG | - | chr8_3:3780493-3780512 | Msa1270410:intron | 55.0% | |
| CTAACCAATCTTGGGCACCC+AGG | + | chr8_3:3780871-3780890 | None:intergenic | 55.0% | |
| GGATATGAGAGCTGCTGCGT+TGG | - | chr8_3:3781508-3781527 | Msa1270410:intron | 55.0% | |
| GTGCGATCCAATGCGGATAC+GGG | + | chr8_3:3782904-3782923 | None:intergenic | 55.0% | |
| GGTGCGATCCAATGCGGATA+CGG | + | chr8_3:3782905-3782924 | None:intergenic | 55.0% | |
| CTAATGCTCCAGAGGCTTCC+TGG | + | chr8_3:3783084-3783103 | None:intergenic | 55.0% | |
| ACCGACCACTACTCTGTCTC+AGG | + | chr8_3:3784011-3784030 | None:intergenic | 55.0% | |
| ! | CGAGCTCGTAGTGTTGAGCC+TGG | - | chr8_3:3780478-3780497 | Msa1270410:intron | 60.0% |
| GTGTCCTGGGTGCCCAAGAT+TGG | - | chr8_3:3780864-3780883 | Msa1270410:intron | 60.0% | |
| !! | GGCACTGGTGCGATCCAATG+CGG | + | chr8_3:3782911-3782930 | None:intergenic | 60.0% |
| TCCAAGGTGACCGCAGAGTC+GGG | + | chr8_3:3783313-3783332 | None:intergenic | 60.0% | |
| GTCCAAGGTGACCGCAGAGT+CGG | + | chr8_3:3783314-3783333 | None:intergenic | 60.0% | |
| AAGTCCCTCACCGGTGGAGC+AGG | - | chr8_3:3782056-3782075 | Msa1270410:five_prime_UTR | 65.0% | |
| AGTCCCTCACCGGTGGAGCA+GGG | - | chr8_3:3782057-3782076 | Msa1270410:five_prime_UTR | 65.0% | |
| TTCCCCTGCTCCACCGGTGA+GGG | + | chr8_3:3782063-3782082 | None:intergenic | 65.0% | |
| TTTCCCCTGCTCCACCGGTG+AGG | + | chr8_3:3782064-3782083 | None:intergenic | 65.0% | |
| ! | GAGGCTTCCTGGCTTGCCAG+TGG | + | chr8_3:3783073-3783092 | None:intergenic | 65.0% |
| CTGGCAAGCCAGGAAGCCTC+TGG | - | chr8_3:3783073-3783092 | Msa1270410:intron | 65.0% | |
| TCCCGACTCTGCGGTCACCT+TGG | - | chr8_3:3783309-3783328 | Msa1270410:intron | 65.0% | |
| GTCCCTCACCGGTGGAGCAG+GGG | - | chr8_3:3782058-3782077 | Msa1270410:five_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 3777824 | 3784294 | 3777824 | ID=Msa1270410;Name=Msa1270410 |
| chr8_3 | mRNA | 3777824 | 3784294 | 3777824 | ID=Msa1270410-mRNA-1;Parent=Msa1270410;Name=Msa1270410-mRNA-1;_AED=0.10;_eAED=0.10;_QI=1581|0.8|0.83|1|0.6|0.5|6|460|263 |
| chr8_3 | exon | 3777824 | 3779075 | 3777824 | ID=Msa1270410-mRNA-1:exon:1252;Parent=Msa1270410-mRNA-1 |
| chr8_3 | exon | 3781233 | 3781477 | 3781233 | ID=Msa1270410-mRNA-1:exon:1251;Parent=Msa1270410-mRNA-1 |
| chr8_3 | exon | 3781561 | 3781760 | 3781561 | ID=Msa1270410-mRNA-1:exon:1250;Parent=Msa1270410-mRNA-1 |
| chr8_3 | exon | 3781881 | 3782532 | 3781881 | ID=Msa1270410-mRNA-1:exon:1249;Parent=Msa1270410-mRNA-1 |
| chr8_3 | exon | 3783640 | 3783972 | 3783640 | ID=Msa1270410-mRNA-1:exon:1248;Parent=Msa1270410-mRNA-1 |
| chr8_3 | exon | 3784144 | 3784294 | 3784144 | ID=Msa1270410-mRNA-1:exon:1247;Parent=Msa1270410-mRNA-1 |
| chr8_3 | five_prime_UTR | 3784144 | 3784294 | 3784144 | ID=Msa1270410-mRNA-1:five_prime_utr;Parent=Msa1270410-mRNA-1 |
| chr8_3 | five_prime_UTR | 3783640 | 3783972 | 3783640 | ID=Msa1270410-mRNA-1:five_prime_utr;Parent=Msa1270410-mRNA-1 |
| chr8_3 | five_prime_UTR | 3781881 | 3782532 | 3781881 | ID=Msa1270410-mRNA-1:five_prime_utr;Parent=Msa1270410-mRNA-1 |
| chr8_3 | five_prime_UTR | 3781561 | 3781760 | 3781561 | ID=Msa1270410-mRNA-1:five_prime_utr;Parent=Msa1270410-mRNA-1 |
| chr8_3 | five_prime_UTR | 3781233 | 3781477 | 3781233 | ID=Msa1270410-mRNA-1:five_prime_utr;Parent=Msa1270410-mRNA-1 |
| chr8_3 | CDS | 3778284 | 3779075 | 3778284 | ID=Msa1270410-mRNA-1:cds;Parent=Msa1270410-mRNA-1 |
| chr8_3 | three_prime_UTR | 3777824 | 3778283 | 3777824 | ID=Msa1270410-mRNA-1:three_prime_utr;Parent=Msa1270410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
