Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284770 | G7JE61 | 93.694 | 111 | 7 | 0 | 5 | 115 | 1219 | 1329 | 9.28e-64 | 219 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0416870 | Msa1284770 | 0.919432 | 4.537970e-87 | -8.615850e-47 |
| Msa0318010 | Msa1284770 | 0.887551 | 1.292426e-72 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284770 | MtrunA17_Chr4g0064061 | 93.694 | 111 | 7 | 0 | 5 | 115 | 1218 | 1328 | 1.88e-67 | 219 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284770 | AT3G33530.4 | 63.158 | 114 | 39 | 1 | 5 | 115 | 1200 | 1313 | 1.36e-43 | 151 |
| Msa1284770 | AT3G33530.1 | 63.158 | 114 | 39 | 1 | 5 | 115 | 1226 | 1339 | 1.36e-43 | 151 |
| Msa1284770 | AT3G33530.3 | 63.158 | 114 | 39 | 1 | 5 | 115 | 1257 | 1370 | 1.40e-43 | 151 |
| Msa1284770 | AT3G33530.2 | 63.158 | 114 | 39 | 1 | 5 | 115 | 1239 | 1352 | 1.66e-43 | 151 |
| Msa1284770 | AT2G26610.1 | 47.748 | 111 | 36 | 1 | 5 | 115 | 1155 | 1243 | 5.48e-28 | 107 |
Find 166 sgRNAs with CRISPR-Local
Find 443 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACATGTTGACACAGTTTC+TGG | 0.154580 | 8_3:-27804324 | Msa1284770:three_prime_UTR |
| GTAATAGTAATTGTGTTTAA+TGG | 0.175644 | 8_3:-27803934 | Msa1284770:three_prime_UTR |
| CATTTGACTGCACCTGTTCT+TGG | 0.197212 | 8_3:-27804945 | Msa1284770:three_prime_UTR |
| TGGATTTCTGACTATGTTAT+TGG | 0.210635 | 8_3:-27810138 | Msa1284770:five_prime_UTR |
| GTTCTTCATTGTTGCCTAAT+TGG | 0.215523 | 8_3:-27808230 | Msa1284770:five_prime_UTR |
| ATGAAGAGTTATGTGTTTAA+TGG | 0.217086 | 8_3:-27803968 | Msa1284770:three_prime_UTR |
| GCAAAATAACATCTTGTCTT+TGG | 0.235427 | 8_3:-27804285 | Msa1284770:three_prime_UTR |
| GGGTCGAGGGAGAGAGAGGG+AGG | 0.253470 | 8_3:-27810926 | Msa1284770:five_prime_UTR |
| TGTTGATTGTCTTAAAATTA+TGG | 0.256283 | 8_3:-27805349 | Msa1284770:three_prime_UTR |
| AATTGCAAGATCACCTTAAC+AGG | 0.263546 | 8_3:+27807203 | None:intergenic |
| ATTGAAACACTTGACCTTCA+TGG | 0.265501 | 8_3:+27808457 | None:intergenic |
| ATGGGACTTGAGGTGGAATT+TGG | 0.271420 | 8_3:-27806540 | Msa1284770:five_prime_UTR |
| CTTGAACGGTGGTGATGGTC+TGG | 0.289548 | 8_3:+27806493 | None:intergenic |
| ATTAAACACATAACTCTTCA+TGG | 0.300625 | 8_3:+27803970 | None:intergenic |
| ATATTCTACTATTGATGATT+TGG | 0.300863 | 8_3:-27809903 | Msa1284770:intron |
| GTGCATCTATGCATGGATTA+AGG | 0.302472 | 8_3:-27805401 | Msa1284770:exon |
| CGAGGGAGAGAGAGGGAGGG+AGG | 0.305014 | 8_3:-27810922 | Msa1284770:five_prime_UTR |
| TTGATGATTGAAATGTAAAT+TGG | 0.306802 | 8_3:-27808349 | Msa1284770:five_prime_UTR |
| CTCCAAAGCACTCAACTAAA+AGG | 0.311692 | 8_3:+27810711 | None:intergenic |
| TGGGCAATACCAAAGAAAAT+TGG | 0.311834 | 8_3:-27805423 | Msa1284770:CDS |
| TTTGAAGTTTGTAGGATTGA+TGG | 0.325667 | 8_3:-27808833 | Msa1284770:intron |
| CAATCTCTGCATGGATTTCA+TGG | 0.325887 | 8_3:+27805561 | None:intergenic |
| TCTCTTCCTTTGCACTCATC+TGG | 0.326355 | 8_3:+27809511 | None:intergenic |
| TTGCATGTTGATAATCTTGT+TGG | 0.328883 | 8_3:+27810743 | None:intergenic |
| TGAGGAGGAGCAGAGGCTTT+TGG | 0.329273 | 8_3:-27808198 | Msa1284770:five_prime_UTR |
| TTGATAGTTTCATGTCAAAT+TGG | 0.329635 | 8_3:+27804003 | None:intergenic |
| CTCTTTGCTAGTTTAAGCCT+TGG | 0.348527 | 8_3:+27806437 | None:intergenic |
| GGATTTCTGACTATGTTATT+GGG | 0.350131 | 8_3:-27810137 | Msa1284770:intron |
| TAGAGGTGGTTTGGGTGGCT+TGG | 0.367131 | 8_3:-27810158 | Msa1284770:five_prime_UTR |
| ATCAAAGATGGACAAGTTAT+AGG | 0.369619 | 8_3:-27807254 | Msa1284770:five_prime_UTR |
| GTTGATAATCTTGTTGGAAA+AGG | 0.372256 | 8_3:+27810749 | None:intergenic |
| TGTCAGATGAGTGGTGATTC+TGG | 0.373206 | 8_3:-27808598 | Msa1284770:intron |
| AGCTAAATACATTGTAAAGC+TGG | 0.378320 | 8_3:-27809971 | Msa1284770:five_prime_UTR |
| GATTGATGGTTCAGTGAGAT+TGG | 0.381066 | 8_3:-27808819 | Msa1284770:five_prime_UTR |
| AGAGAGGGAGGGAGGAGTGC+CGG | 0.384400 | 8_3:-27810914 | Msa1284770:five_prime_UTR |
| TTGTTGGAAAAGGGAAGTTT+TGG | 0.392676 | 8_3:+27810759 | None:intergenic |
| GAATTCGCCGGCGGTGGGAT+TGG | 0.402273 | 8_3:-27810853 | Msa1284770:five_prime_UTR |
| TCCTATGATAGAGGTGGTTT+GGG | 0.403036 | 8_3:-27810166 | Msa1284770:five_prime_UTR |
| TATAGGTTATGTGGATCAAT+GGG | 0.403077 | 8_3:-27807237 | Msa1284770:five_prime_UTR |
| TGGTGAAGATTGTAAAAGAA+AGG | 0.410674 | 8_3:+27810779 | None:intergenic |
| CTTGCAGAGTGTTGCAAAGA+TGG | 0.412199 | 8_3:-27805802 | Msa1284770:intron |
| TGCACAGCGAACATGGTATC+TGG | 0.413263 | 8_3:-27805766 | Msa1284770:CDS |
| ATCCTATGATAGAGGTGGTT+TGG | 0.419822 | 8_3:-27810167 | Msa1284770:five_prime_UTR |
| CCTCACAACAGTATCCAATT+AGG | 0.423095 | 8_3:+27808216 | None:intergenic |
| ACTAGAATGAAAATTGCATT+AGG | 0.423344 | 8_3:-27807999 | Msa1284770:five_prime_UTR |
| TTATGATCATTTCCAAGAAC+AGG | 0.423613 | 8_3:+27804933 | None:intergenic |
| TTGATAATCTTGTTGGAAAA+GGG | 0.429487 | 8_3:+27810750 | None:intergenic |
| GGAGGGAGTCTGATTTGTTG+TGG | 0.434640 | 8_3:+27810825 | None:intergenic |
| CATTGAACTAAACACACTTC+CGG | 0.436140 | 8_3:-27804169 | Msa1284770:three_prime_UTR |
| CAAGTTCATCGGTTAATGAT+AGG | 0.437799 | 8_3:-27805508 | Msa1284770:CDS |
| AGTTGTTCAGCTTCTTGAAC+GGG | 0.438920 | 8_3:-27804201 | Msa1284770:three_prime_UTR |
| TGCAGAGATTGTTTCTGACT+TGG | 0.445664 | 8_3:-27805549 | Msa1284770:CDS |
| AGGAGGCCTTACATGTCAAA+AGG | 0.450488 | 8_3:-27806416 | Msa1284770:exon |
| GGGCACTTCACTCCCTGTTA+AGG | 0.450907 | 8_3:-27807216 | Msa1284770:intron |
| GGTGAAGATTGTAAAAGAAA+GGG | 0.452170 | 8_3:+27810780 | None:intergenic |
| TTGTGGAAAAGAACAATAAC+CGG | 0.454826 | 8_3:-27808541 | Msa1284770:five_prime_UTR |
| GATAAACATTGCAGCTGTAT+CGG | 0.455296 | 8_3:+27805592 | None:intergenic |
| GGAGAAGAAGTCGCCGGCGG+TGG | 0.459230 | 8_3:-27810893 | Msa1284770:five_prime_UTR |
| TTGCTGTTGATGAATACTTT+GGG | 0.462642 | 8_3:-27805442 | Msa1284770:CDS |
| GTTGCTGTTGATGAATACTT+TGG | 0.464781 | 8_3:-27805443 | Msa1284770:CDS |
| GGCTCTGCTTAACAATCAAC+AGG | 0.465116 | 8_3:-27807920 | Msa1284770:intron |
| GGAGAAGAATTCGCCGGCGG+TGG | 0.467459 | 8_3:-27810859 | Msa1284770:five_prime_UTR |
| ATAAACATTGCAGCTGTATC+GGG | 0.470448 | 8_3:+27805593 | None:intergenic |
| GATCCATCATATATTGCTAC+TGG | 0.472187 | 8_3:+27808387 | None:intergenic |
| AAGCACTGTATCTTTGCTTC+CGG | 0.473146 | 8_3:+27808522 | None:intergenic |
| AAGAATATGTTGTCTTCCTC+AGG | 0.473205 | 8_3:+27808562 | None:intergenic |
| GAGGGAGTCTGATTTGTTGT+GGG | 0.474350 | 8_3:+27810826 | None:intergenic |
| TTGAACGGTGGTGATGGTCT+GGG | 0.480172 | 8_3:+27806494 | None:intergenic |
| GCAACTGCAGCTCTCACAGC+AGG | 0.480350 | 8_3:-27807941 | Msa1284770:five_prime_UTR |
| CCGGCGGTGGGAGGGAGTAC+CGG | 0.483738 | 8_3:-27810880 | Msa1284770:five_prime_UTR |
| TTATAGGTTATGTGGATCAA+TGG | 0.483999 | 8_3:-27807238 | Msa1284770:five_prime_UTR |
| TGAGCTCTTAGAAGCTGTGC+AGG | 0.488333 | 8_3:-27804985 | Msa1284770:three_prime_UTR |
| AGCTTCTTGAACGGTGGTGA+TGG | 0.489012 | 8_3:+27806488 | None:intergenic |
| AATTGCATTAGGTGCAGCTA+AGG | 0.490148 | 8_3:-27807988 | Msa1284770:five_prime_UTR |
| GCAGAGATTGTTTCTGACTT+GGG | 0.491632 | 8_3:-27805548 | Msa1284770:CDS |
| TGTAAAGTGCATACAAGGAT+TGG | 0.495823 | 8_3:-27810017 | Msa1284770:five_prime_UTR |
| GTACATGACAAGAGGGAGCT+TGG | 0.497616 | 8_3:-27808168 | Msa1284770:five_prime_UTR |
| ACCCAAACCACCTCTATCAT+AGG | 0.498618 | 8_3:+27810165 | None:intergenic |
| GCTAAATACATTGTAAAGCT+GGG | 0.498858 | 8_3:-27809970 | Msa1284770:five_prime_UTR |
| TACTTCCCACATCCAGATGT+TGG | 0.499251 | 8_3:+27804134 | None:intergenic |
| TTCCTTTGCACTCATCTGGA+TGG | 0.513836 | 8_3:+27809515 | None:intergenic |
| GAGTGCAAAGGAAGAGATTG+TGG | 0.517469 | 8_3:-27809505 | Msa1284770:five_prime_UTR |
| TATGATAGAGGTGGTTTGGG+TGG | 0.518870 | 8_3:-27810163 | Msa1284770:five_prime_UTR |
| GAACAGGTGCAGTCAAATGA+TGG | 0.520727 | 8_3:+27804949 | None:intergenic |
| ACCGCCGGCGACTTCTTCTC+CGG | 0.520831 | 8_3:+27810895 | None:intergenic |
| GAACTATGATATAAAAGTGC+AGG | 0.521762 | 8_3:-27808797 | Msa1284770:intron |
| CAGGGTGATATGATCAAAGA+TGG | 0.524043 | 8_3:-27807266 | Msa1284770:five_prime_UTR |
| AAGAAGTCGCCGGCGGTGGG+AGG | 0.528234 | 8_3:-27810889 | Msa1284770:five_prime_UTR |
| GGTCGAGGGAGAGAGAGGGA+GGG | 0.528471 | 8_3:-27810925 | Msa1284770:five_prime_UTR |
| TTTCCAGTAGCAATATATGA+TGG | 0.529167 | 8_3:-27808390 | Msa1284770:five_prime_UTR |
| GACGACAATGAGAGAGGGGA+GGG | 0.529277 | 8_3:+27810808 | None:intergenic |
| TGGACAAGTTATAGGTTATG+TGG | 0.534522 | 8_3:-27807246 | Msa1284770:five_prime_UTR |
| TAAAATGTAAAGTGCATACA+AGG | 0.536296 | 8_3:-27810022 | Msa1284770:five_prime_UTR |
| GTTCAAGAAGCTGAACAACT+TGG | 0.541778 | 8_3:+27804204 | None:intergenic |
| TTTAGTTGAGTGCTTTGGAG+TGG | 0.545392 | 8_3:-27810708 | Msa1284770:intron |
| GCTTCTGCTTGCTAGAGACA+AGG | 0.547384 | 8_3:-27809936 | Msa1284770:five_prime_UTR |
| GAAAGGGACGACAATGAGAG+AGG | 0.548013 | 8_3:+27810802 | None:intergenic |
| ATTTCCAAAATCTAGACCAT+GGG | 0.554480 | 8_3:-27805313 | Msa1284770:three_prime_UTR |
| CTTCTGCTTGCTAGAGACAA+GGG | 0.558343 | 8_3:-27809935 | Msa1284770:five_prime_UTR |
| GGAGGCCTTACATGTCAAAA+GGG | 0.560700 | 8_3:-27806415 | Msa1284770:intron |
| TATGTCATGCACAGCGAACA+TGG | 0.561667 | 8_3:-27805773 | Msa1284770:CDS |
| TGACAAGCTTCTTGAGACCA+AGG | 0.563747 | 8_3:-27806454 | Msa1284770:five_prime_UTR |
| AAGTTGTTCAGCTTCTTGAA+CGG | 0.563877 | 8_3:-27804202 | Msa1284770:three_prime_UTR |
| AGAAGTCGCCGGCGGTGGGA+GGG | 0.564843 | 8_3:-27810888 | Msa1284770:five_prime_UTR |
| AGGGAGTCTGATTTGTTGTG+GGG | 0.564914 | 8_3:+27810827 | None:intergenic |
| CCGGTACTCCCTCCCACCGC+CGG | 0.565659 | 8_3:+27810880 | None:intergenic |
| TGTCGATGAATCAAGTTCAT+CGG | 0.567835 | 8_3:-27805519 | Msa1284770:CDS |
| GTCTTTGGAACCACTTGATG+CGG | 0.568436 | 8_3:-27804270 | Msa1284770:three_prime_UTR |
| TCAAACCTTGCAGTCAGATG+TGG | 0.568833 | 8_3:-27807130 | Msa1284770:intron |
| GAGAAGAAGTCGCCGGCGGT+GGG | 0.569272 | 8_3:-27810892 | Msa1284770:five_prime_UTR |
| AGATAGTGATCCTATGATAG+AGG | 0.569613 | 8_3:-27810175 | Msa1284770:five_prime_UTR |
| ACCGCCGGCGAATTCTTCTC+CGG | 0.570939 | 8_3:+27810861 | None:intergenic |
| GAGAAGAATTCGCCGGCGGT+GGG | 0.571292 | 8_3:-27810858 | Msa1284770:five_prime_UTR |
| GATTGTGATGGGACTTGAGG+TGG | 0.571617 | 8_3:-27806547 | Msa1284770:five_prime_UTR |
| AAAATTGGTGCATCTATGCA+TGG | 0.571863 | 8_3:-27805408 | Msa1284770:CDS |
| AAAGGGACGACAATGAGAGA+GGG | 0.573809 | 8_3:+27810803 | None:intergenic |
| AGTGCAAAGGAAGAGATTGT+GGG | 0.575422 | 8_3:-27809504 | Msa1284770:five_prime_UTR |
| TTGCAGAGTGTTGCAAAGAT+GGG | 0.577527 | 8_3:-27805801 | Msa1284770:intron |
| CATGGATTTCATGGCATGCA+AGG | 0.578409 | 8_3:+27805570 | None:intergenic |
| ACATAAAATTGTGGTAGGAG+TGG | 0.582764 | 8_3:+27804230 | None:intergenic |
| TGAGATTGTGATGGGACTTG+AGG | 0.583589 | 8_3:-27806550 | Msa1284770:five_prime_UTR |
| CATGTCAGCAGCTTCTTGAA+CGG | 0.584545 | 8_3:+27806479 | None:intergenic |
| TGCTTCTTGTAGTGCACCAG+CGG | 0.588769 | 8_3:+27805643 | None:intergenic |
| GATTGTAAAAGAAAGGGAAA+GGG | 0.589326 | 8_3:+27810786 | None:intergenic |
| GGTTGACATAAAATTGTGGT+AGG | 0.591143 | 8_3:+27804225 | None:intergenic |
| GTCAGCAGCTTCTTGAACGG+TGG | 0.593457 | 8_3:+27806482 | None:intergenic |
| AGGAAGACAACATATTCTTG+TGG | 0.600574 | 8_3:-27808558 | Msa1284770:five_prime_UTR |
| AGATTGTAAAAGAAAGGGAA+AGG | 0.601542 | 8_3:+27810785 | None:intergenic |
| TGGTGCACTACAAGAAGCAT+TGG | 0.601818 | 8_3:-27805639 | Msa1284770:CDS |
| GGGGAATCCAATCCCACCGC+CGG | 0.602871 | 8_3:+27810846 | None:intergenic |
| AGAGTGTTGCAAAGATGGGC+TGG | 0.604480 | 8_3:-27805797 | Msa1284770:CDS |
| TTCTGCTTGCTAGAGACAAG+GGG | 0.610990 | 8_3:-27809934 | Msa1284770:five_prime_UTR |
| GGCTTAAACTAGCAAAGAGG+AGG | 0.615054 | 8_3:-27806433 | Msa1284770:five_prime_UTR |
| GTGTATGAGTACATGACAAG+AGG | 0.617548 | 8_3:-27808176 | Msa1284770:five_prime_UTR |
| ACTTGGTTGACATAAAATTG+TGG | 0.621059 | 8_3:+27804221 | None:intergenic |
| GGACGACAATGAGAGAGGGG+AGG | 0.623287 | 8_3:+27810807 | None:intergenic |
| GATTTCCAAAATCTAGACCA+TGG | 0.623478 | 8_3:-27805314 | Msa1284770:three_prime_UTR |
| GGTGGAATTTGGCATTAGTG+TGG | 0.628201 | 8_3:-27806529 | Msa1284770:five_prime_UTR |
| GTGCAGGTTGAGATTGTGAT+GGG | 0.630018 | 8_3:-27806558 | Msa1284770:intron |
| TGTGAGAGCTGCAGTTGCTG+AGG | 0.635354 | 8_3:+27807946 | None:intergenic |
| AGCATTGGCAGCTCTTCGTG+AGG | 0.642510 | 8_3:-27805624 | Msa1284770:CDS |
| ACTGTTGTGAGGAGGAGCAG+AGG | 0.644291 | 8_3:-27808205 | Msa1284770:five_prime_UTR |
| TGTGCAGGTTGAGATTGTGA+TGG | 0.647380 | 8_3:-27806559 | Msa1284770:intron |
| TACCATCCAGATGAGTGCAA+AGG | 0.651843 | 8_3:-27809517 | Msa1284770:five_prime_UTR |
| AGTCAGAAACAATCTCTGCA+TGG | 0.652126 | 8_3:+27805552 | None:intergenic |
| AGTGCCGGAGAAGAAGTCGC+CGG | 0.654528 | 8_3:-27810899 | Msa1284770:five_prime_UTR |
| ATTGCATTAGGTGCAGCTAA+GGG | 0.656681 | 8_3:-27807987 | Msa1284770:five_prime_UTR |
| ACCTTGCAGTCAGATGTGGA+TGG | 0.659433 | 8_3:-27807126 | Msa1284770:intron |
| CAAGGCTTAAACTAGCAAAG+AGG | 0.660316 | 8_3:-27806436 | Msa1284770:five_prime_UTR |
| TAGTGATCCTATGATAGAGG+TGG | 0.661110 | 8_3:-27810172 | Msa1284770:five_prime_UTR |
| AGTACCGGAGAAGAATTCGC+CGG | 0.663293 | 8_3:-27810865 | Msa1284770:five_prime_UTR |
| TGTATGAGTACATGACAAGA+GGG | 0.666417 | 8_3:-27808175 | Msa1284770:five_prime_UTR |
| AAGGGACGACAATGAGAGAG+GGG | 0.666541 | 8_3:+27810804 | None:intergenic |
| TGATTGGACTGTCAGATGAG+TGG | 0.670291 | 8_3:-27808607 | Msa1284770:intron |
| GCCGGAGAAGAAGTCGCCGG+CGG | 0.671593 | 8_3:-27810896 | Msa1284770:five_prime_UTR |
| TTGCAGTCAGATGTGGATGG+AGG | 0.675350 | 8_3:-27807123 | Msa1284770:intron |
| AATTGGATACTGTTGTGAGG+AGG | 0.680705 | 8_3:-27808213 | Msa1284770:five_prime_UTR |
| GTGCAAAGGAAGAGATTGTG+GGG | 0.684414 | 8_3:-27809503 | Msa1284770:five_prime_UTR |
| TTTCCAAAATCTAGACCATG+GGG | 0.691648 | 8_3:-27805312 | Msa1284770:three_prime_UTR |
| CCTAATTGGATACTGTTGTG+AGG | 0.693032 | 8_3:-27808216 | Msa1284770:five_prime_UTR |
| GATACTCTGCTACATTACCA+TGG | 0.696698 | 8_3:-27808025 | Msa1284770:five_prime_UTR |
| ACCGGAGAAGAATTCGCCGG+CGG | 0.697852 | 8_3:-27810862 | Msa1284770:five_prime_UTR |
| ACAGCGAACATGGTATCTGG+AGG | 0.716874 | 8_3:-27805763 | Msa1284770:intron |
| ATTGCAAGATCACCTTAACA+GGG | 0.717743 | 8_3:+27807204 | None:intergenic |
| ATAGGTTATGTGGATCAATG+GGG | 0.754994 | 8_3:-27807236 | Msa1284770:five_prime_UTR |
| TTCCAAAATCTAGACCATGG+GGG | 0.778249 | 8_3:-27805311 | Msa1284770:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAATTATAAAAAAAAAA+AGG | - | chr8_3:27807232-27807251 | Msa1284770:five_prime_UTR | 0.0% |
| !! | ATTTAGTTGTTATAATTAAT+TGG | - | chr8_3:27805429-27805448 | Msa1284770:CDS | 10.0% |
| !! | TTTAGTTGTTATAATTAATT+GGG | - | chr8_3:27805430-27805449 | Msa1284770:CDS | 10.0% |
| !! | AAATATTAATCCATTATATT+GGG | + | chr8_3:27805699-27805718 | None:intergenic | 10.0% |
| !! | AAAATATTAATCCATTATAT+TGG | + | chr8_3:27805700-27805719 | None:intergenic | 10.0% |
| !!! | ATTAATATTTTACTGAATAA+GGG | - | chr8_3:27805709-27805728 | Msa1284770:intron | 10.0% |
| !! | AAATATTAATCCATTATATT+GGG | + | chr8_3:27805699-27805718 | None:intergenic | 10.0% |
| !! | AAAATATTAATCCATTATAT+TGG | + | chr8_3:27805700-27805719 | None:intergenic | 10.0% |
| !!! | ATTAATATTTTACTGAATAA+GGG | - | chr8_3:27805709-27805728 | Msa1284770:intron | 10.0% |
| !! | ATATGTATATAATATAGTAT+TGG | + | chr8_3:27806725-27806744 | None:intergenic | 10.0% |
| !! | TATAAAATATAATAGTAGTT+GGG | + | chr8_3:27807964-27807983 | None:intergenic | 10.0% |
| !!! | TTTTTGTATCAAAATATTTA+TGG | + | chr8_3:27809452-27809471 | None:intergenic | 10.0% |
| !!! | TTTTTTTTGAAATTTTGTAC+TGG | - | chr8_3:27804268-27804287 | Msa1284770:three_prime_UTR | 15.0% |
| !!! | TTTTTTTGAAATTTTGTACT+GGG | - | chr8_3:27804269-27804288 | Msa1284770:three_prime_UTR | 15.0% |
| !! | TCTAAATAGATATAAAAATG+TGG | - | chr8_3:27805221-27805240 | Msa1284770:intron | 15.0% |
| !!! | TTTTTAGATCCTTAAATATA+TGG | - | chr8_3:27805463-27805482 | Msa1284770:CDS | 15.0% |
| !!! | GATTAATATTTTACTGAATA+AGG | - | chr8_3:27805708-27805727 | Msa1284770:intron | 15.0% |
| !!! | GATTAATATTTTACTGAATA+AGG | - | chr8_3:27805708-27805727 | Msa1284770:intron | 15.0% |
| !!! | ATATGTTTTGATCTTATTTA+AGG | - | chr8_3:27807141-27807160 | Msa1284770:intron | 15.0% |
| !! | TATAAAAAAAAAAAGGATTG+TGG | - | chr8_3:27807239-27807258 | Msa1284770:five_prime_UTR | 15.0% |
| !! | AACATTTGAAGAATAAAAAA+GGG | + | chr8_3:27807478-27807497 | None:intergenic | 15.0% |
| !! | AAACATTTGAAGAATAAAAA+AGG | + | chr8_3:27807479-27807498 | None:intergenic | 15.0% |
| !! | CTTTCATAAAAAAAATAGTA+CGG | - | chr8_3:27807793-27807812 | Msa1284770:intron | 15.0% |
| !! | TTTCATAAAAAAAATAGTAC+GGG | - | chr8_3:27807794-27807813 | Msa1284770:intron | 15.0% |
| !! | CTATAAAATATAATAGTAGT+TGG | + | chr8_3:27807965-27807984 | None:intergenic | 15.0% |
| !!! | CTATTATATTTTATAGTAGT+TGG | - | chr8_3:27807969-27807988 | Msa1284770:five_prime_UTR | 15.0% |
| !!! | TTATCTAAAATGATTCTTAA+AGG | + | chr8_3:27808656-27808675 | None:intergenic | 15.0% |
| !! | GCTTGATTAATATAAAAATA+TGG | + | chr8_3:27808821-27808840 | None:intergenic | 15.0% |
| !! | TTCAAAATTATTATGTAGAA+CGG | + | chr8_3:27808903-27808922 | None:intergenic | 15.0% |
| !!! | TAACTTTTTAGTTCATTTTA+TGG | - | chr8_3:27810156-27810175 | Msa1284770:five_prime_UTR | 15.0% |
| !! | ACAATGAATTCAATTAAAAA+AGG | + | chr8_3:27810380-27810399 | None:intergenic | 15.0% |
| !!! | TCTTATATGTATTTTATAGA+AGG | - | chr8_3:27810452-27810471 | Msa1284770:intron | 15.0% |
| !!! | TGTTTCATATCAAATTTGTT+TGG | - | chr8_3:27804226-27804245 | Msa1284770:three_prime_UTR | 20.0% |
| !!! | GTTTCATATCAAATTTGTTT+GGG | - | chr8_3:27804227-27804246 | Msa1284770:three_prime_UTR | 20.0% |
| !!! | TTTGATTATTGAGTTTTGAT+CGG | - | chr8_3:27804293-27804312 | Msa1284770:three_prime_UTR | 20.0% |
| !!! | TTTGTTTTGTTGTTTGTTTT+TGG | - | chr8_3:27804355-27804374 | Msa1284770:three_prime_UTR | 20.0% |
| !!! | TTTGGATGATTTTGTATTAT+CGG | - | chr8_3:27804373-27804392 | Msa1284770:intron | 20.0% |
| !!! | TGTTGATTTGAATATGAATT+TGG | - | chr8_3:27804396-27804415 | Msa1284770:intron | 20.0% |
| !!! | TGAATATGAATTTGGTTTTA+TGG | - | chr8_3:27804404-27804423 | Msa1284770:intron | 20.0% |
| !!! | GAATATGAATTTGGTTTTAT+GGG | - | chr8_3:27804405-27804424 | Msa1284770:intron | 20.0% |
| !!! | TTGTAGCTTAAATTTTGAAT+TGG | - | chr8_3:27804478-27804497 | Msa1284770:intron | 20.0% |
| !!! | TGTAGCTTAAATTTTGAATT+GGG | - | chr8_3:27804479-27804498 | Msa1284770:intron | 20.0% |
| !! | AGATTTGATGAAGATTAAAA+TGG | - | chr8_3:27804530-27804549 | Msa1284770:intron | 20.0% |
| !! | GATTTGATGAAGATTAAAAT+GGG | - | chr8_3:27804531-27804550 | Msa1284770:intron | 20.0% |
| !! | TATCTGTAATTGTAAATTTG+TGG | - | chr8_3:27804747-27804766 | Msa1284770:intron | 20.0% |
| !!! | ATATTCTACTATTGATGATT+TGG | - | chr8_3:27804921-27804940 | Msa1284770:three_prime_UTR | 20.0% |
| !!! | ATGTTTTGATGTAAACAATT+AGG | - | chr8_3:27804966-27804985 | Msa1284770:three_prime_UTR | 20.0% |
| !!! | TTTGATTGATCTGTTTTTAT+AGG | - | chr8_3:27805182-27805201 | Msa1284770:intron | 20.0% |
| !!! | GTTTTTCTTGATGAATATTT+GGG | - | chr8_3:27805267-27805286 | Msa1284770:intron | 20.0% |
| !!! | GGATAATTTAGTGAAATTTT+AGG | + | chr8_3:27805388-27805407 | None:intergenic | 20.0% |
| !! | TAACTATGCAATGAAAATTA+AGG | + | chr8_3:27805409-27805428 | None:intergenic | 20.0% |
| !! | TATCAATGTCCATATATTTA+AGG | + | chr8_3:27805475-27805494 | None:intergenic | 20.0% |
| !!! | ATTAGAGATTTAAGATCAAT+CGG | - | chr8_3:27805494-27805513 | Msa1284770:CDS | 20.0% |
| !! | AATAGTGTATTTCAAATCAA+TGG | + | chr8_3:27805571-27805590 | None:intergenic | 20.0% |
| !!! | ACTTGAATTTTTTTAGTAAG+TGG | - | chr8_3:27805664-27805683 | Msa1284770:CDS | 20.0% |
| !! | AATAGTGTATTTCAAATCAA+TGG | + | chr8_3:27805571-27805590 | None:intergenic | 20.0% |
| !!! | TGATATCAGATTTGAATTTT+TGG | - | chr8_3:27805915-27805934 | Msa1284770:intron | 20.0% |
| !!! | ATTGTTTCTTTATTTTGTTG+AGG | - | chr8_3:27806087-27806106 | Msa1284770:intron | 20.0% |
| !! | AATGCAAAACATTAATATCT+AGG | + | chr8_3:27806193-27806212 | None:intergenic | 20.0% |
| !!! | TTGATGATTGAAATGTAAAT+TGG | - | chr8_3:27806475-27806494 | Msa1284770:five_prime_UTR | 20.0% |
| !!! | AAGCATAGACATATTTTAAT+TGG | + | chr8_3:27806970-27806989 | None:intergenic | 20.0% |
| !! | CTATAAACACCTTAAAATAA+TGG | + | chr8_3:27807102-27807121 | None:intergenic | 20.0% |
| !! | CTATTTATAGACTAATTTGA+AGG | - | chr8_3:27808000-27808019 | Msa1284770:five_prime_UTR | 20.0% |
| !! | GGATCAAAATATTATCAAAA+TGG | + | chr8_3:27808581-27808600 | None:intergenic | 20.0% |
| !!! | TGATAATATTTTGATCCTTT+TGG | - | chr8_3:27808584-27808603 | Msa1284770:five_prime_UTR | 20.0% |
| !! | AAAAATATGGAACAAAGTAT+AGG | + | chr8_3:27808808-27808827 | None:intergenic | 20.0% |
| !! | AAAAAGGATAAATTAAACAG+TGG | + | chr8_3:27809089-27809108 | None:intergenic | 20.0% |
| !!! | TGTTGATTGTCTTAAAATTA+TGG | - | chr8_3:27809475-27809494 | Msa1284770:five_prime_UTR | 20.0% |
| !! | AATATTGAAACAGAACAATA+TGG | + | chr8_3:27809699-27809718 | None:intergenic | 20.0% |
| !! | AAAACATTGAATGTCAAATT+TGG | + | chr8_3:27809967-27809986 | None:intergenic | 20.0% |
| !! | ACAAGTTTATTATTCAATGT+TGG | - | chr8_3:27810049-27810068 | Msa1284770:intron | 20.0% |
| !! | ATGAACTAAAAAGTTAAAGT+AGG | + | chr8_3:27810152-27810171 | None:intergenic | 20.0% |
| !!! | ATATGTATTTTATAGAAGGT+TGG | - | chr8_3:27810456-27810475 | Msa1284770:intron | 20.0% |
| !! | GTAATAGTAATTGTGTTTAA+TGG | - | chr8_3:27810890-27810909 | Msa1284770:five_prime_UTR | 20.0% |
| !! | TTGATAATCTTGTTGGAAAA+GGG | + | chr8_3:27804077-27804096 | None:intergenic | 25.0% |
| ! | AGACATTTCTGATATGAAAA+TGG | + | chr8_3:27804191-27804210 | None:intergenic | 25.0% |
| !! | AAAATTGAGAATTGGTTTAG+TGG | - | chr8_3:27804321-27804340 | Msa1284770:three_prime_UTR | 25.0% |
| !! | AAATTGAGAATTGGTTTAGT+GGG | - | chr8_3:27804322-27804341 | Msa1284770:three_prime_UTR | 25.0% |
| !!! | TGGGTTTCATATGTTTTTTT+TGG | - | chr8_3:27804424-27804443 | Msa1284770:intron | 25.0% |
| ! | AAACTGAAAAAGATTTGAGT+AGG | - | chr8_3:27804588-27804607 | Msa1284770:intron | 25.0% |
| ! | GTAATTGTAAATTTGTGGTA+AGG | - | chr8_3:27804752-27804771 | Msa1284770:intron | 25.0% |
| ! | TAAAATGTAAAGTGCATACA+AGG | - | chr8_3:27804802-27804821 | Msa1284770:intron | 25.0% |
| ! | TCAATAATAGACATCAACTA+TGG | + | chr8_3:27805017-27805036 | None:intergenic | 25.0% |
| !!! | ATCGTAATTGGATTTGTTTT+AGG | - | chr8_3:27805245-27805264 | Msa1284770:intron | 25.0% |
| !! | GGTTTTTCTTGATGAATATT+TGG | - | chr8_3:27805266-27805285 | Msa1284770:intron | 25.0% |
| ! | GTTCAAATGCACAATTTATT+TGG | - | chr8_3:27805614-27805633 | Msa1284770:CDS | 25.0% |
| ! | GTTCAAATGCACAATTTATT+TGG | - | chr8_3:27805614-27805633 | Msa1284770:CDS | 25.0% |
| !!! | AGATTTGAATTTTTGGTAAG+TGG | - | chr8_3:27805922-27805941 | Msa1284770:intron | 25.0% |
| !!! | GTACCAATGTTTCATTTTTT+TGG | - | chr8_3:27806053-27806072 | Msa1284770:intron | 25.0% |
| ! | TCACCAAAAAAATGAAACAT+TGG | + | chr8_3:27806059-27806078 | None:intergenic | 25.0% |
| ! | CTATTAGTTAAACACATGTT+TGG | + | chr8_3:27806153-27806172 | None:intergenic | 25.0% |
| !! | ATGTTTTGCATTTTTGTGAT+TGG | - | chr8_3:27806201-27806220 | Msa1284770:intron | 25.0% |
| !!! | TATATTTTTGCTTCTTCAAG+AGG | + | chr8_3:27806344-27806363 | None:intergenic | 25.0% |
| ! | GCAAAAATATATATCCATGA+AGG | - | chr8_3:27806353-27806372 | Msa1284770:intron | 25.0% |
| !!! | TAATCTCTTTTTAGTGTTTC+CGG | - | chr8_3:27806395-27806414 | Msa1284770:intron | 25.0% |
| ! | AAATTGAAAAACACAAACAC+CGG | + | chr8_3:27806417-27806436 | None:intergenic | 25.0% |
| !! | TTCATAGTATCTGAACTTTT+AGG | - | chr8_3:27806542-27806561 | Msa1284770:five_prime_UTR | 25.0% |
| ! | CATATATTAATCATGCTGTA+AGG | - | chr8_3:27806740-27806759 | Msa1284770:intron | 25.0% |
| ! | ACTAGAATGAAAATTGCATT+AGG | - | chr8_3:27806825-27806844 | Msa1284770:intron | 25.0% |
| ! | GATCAAAACATATAAAGCTT+GGG | + | chr8_3:27807134-27807153 | None:intergenic | 25.0% |
| ! | AGATCAAAACATATAAAGCT+TGG | + | chr8_3:27807135-27807154 | None:intergenic | 25.0% |
| ! | TTGATGTATATATTTCCACT+AGG | - | chr8_3:27807300-27807319 | Msa1284770:intron | 25.0% |
| ! | TGATGTATATATTTCCACTA+GGG | - | chr8_3:27807301-27807320 | Msa1284770:intron | 25.0% |
| !!! | TTTACAGTTTTAAAATCTGC+AGG | - | chr8_3:27807539-27807558 | Msa1284770:intron | 25.0% |
| !!! | TTACAGTTTTAAAATCTGCA+GGG | - | chr8_3:27807540-27807559 | Msa1284770:intron | 25.0% |
| ! | TTTGAAAGAAAAAGAAAGTC+AGG | + | chr8_3:27807679-27807698 | None:intergenic | 25.0% |
| !!! | ATATTTGACTTGAGTAGTTT+GGG | - | chr8_3:27807766-27807785 | Msa1284770:intron | 25.0% |
| !! | CTTTTTCCACTCTTAATTAA+TGG | + | chr8_3:27807852-27807871 | None:intergenic | 25.0% |
| !! | TCTATTTTACATATGTATGC+AGG | + | chr8_3:27807927-27807946 | None:intergenic | 25.0% |
| ! | ATTTACATTTCAAATTGTGC+AGG | - | chr8_3:27808250-27808269 | Msa1284770:five_prime_UTR | 25.0% |
| ! | TTATTATGTAGAACGGAAAA+TGG | + | chr8_3:27808896-27808915 | None:intergenic | 25.0% |
| ! | AATGCAGATATTAATCATCT+TGG | + | chr8_3:27808934-27808953 | None:intergenic | 25.0% |
| ! | CTGCATTTATATGAATGAAA+AGG | - | chr8_3:27808947-27808966 | Msa1284770:intron | 25.0% |
| ! | ACACAACTGATAAAAATTTG+AGG | + | chr8_3:27810106-27810125 | None:intergenic | 25.0% |
| ! | ATGATAAGAAATAAAAGCCA+TGG | + | chr8_3:27810338-27810357 | None:intergenic | 25.0% |
| !! | TTGATAGTTTCATGTCAAAT+TGG | + | chr8_3:27810824-27810843 | None:intergenic | 25.0% |
| ! | ATTAAACACATAACTCTTCA+TGG | + | chr8_3:27810857-27810876 | None:intergenic | 25.0% |
| ! | ATGAAGAGTTATGTGTTTAA+TGG | - | chr8_3:27810856-27810875 | Msa1284770:five_prime_UTR | 25.0% |
| GATTGTAAAAGAAAGGGAAA+GGG | + | chr8_3:27804041-27804060 | None:intergenic | 30.0% | |
| AGATTGTAAAAGAAAGGGAA+AGG | + | chr8_3:27804042-27804061 | None:intergenic | 30.0% | |
| GGTGAAGATTGTAAAAGAAA+GGG | + | chr8_3:27804047-27804066 | None:intergenic | 30.0% | |
| TGGTGAAGATTGTAAAAGAA+AGG | + | chr8_3:27804048-27804067 | None:intergenic | 30.0% | |
| !! | GTTGATAATCTTGTTGGAAA+AGG | + | chr8_3:27804078-27804097 | None:intergenic | 30.0% |
| !! | TTGCATGTTGATAATCTTGT+TGG | + | chr8_3:27804084-27804103 | None:intergenic | 30.0% |
| AGAAATGTCTCTCTTTGAAT+CGG | - | chr8_3:27804201-27804220 | Msa1284770:three_prime_UTR | 30.0% | |
| TGGATTTCTGACTATGTTAT+TGG | - | chr8_3:27804686-27804705 | Msa1284770:intron | 30.0% | |
| GGATTTCTGACTATGTTATT+GGG | - | chr8_3:27804687-27804706 | Msa1284770:intron | 30.0% | |
| AGCTAAATACATTGTAAAGC+TGG | - | chr8_3:27804853-27804872 | Msa1284770:intron | 30.0% | |
| GCTAAATACATTGTAAAGCT+GGG | - | chr8_3:27804854-27804873 | Msa1284770:intron | 30.0% | |
| GTATGACTAGGAATATAAGA+TGG | - | chr8_3:27805053-27805072 | Msa1284770:intron | 30.0% | |
| ! | CTTATGGTGTTCAAGTTAAA+TGG | + | chr8_3:27805082-27805101 | None:intergenic | 30.0% |
| TAAAAATGTGGCATCGTAAT+TGG | - | chr8_3:27805233-27805252 | Msa1284770:intron | 30.0% | |
| GTATTTCAAATCAATGGTGA+AGG | + | chr8_3:27805565-27805584 | None:intergenic | 30.0% | |
| !!! | ATAAGGGTTTTGAAGTTTGT+AGG | - | chr8_3:27805725-27805744 | Msa1284770:intron | 30.0% |
| ! | TTTGAAGTTTGTAGGATTGA+TGG | - | chr8_3:27805733-27805752 | Msa1284770:intron | 30.0% |
| ! | CAGTGAGATTTAAGATCAAT+CGG | - | chr8_3:27805758-27805777 | Msa1284770:intron | 30.0% |
| GTATTTCAAATCAATGGTGA+AGG | + | chr8_3:27805565-27805584 | None:intergenic | 30.0% | |
| !!! | ATAAGGGTTTTGAAGTTTGT+AGG | - | chr8_3:27805725-27805744 | Msa1284770:intron | 30.0% |
| ! | TTTGAAGTTTGTAGGATTGA+TGG | - | chr8_3:27805733-27805752 | Msa1284770:intron | 30.0% |
| ! | GAACTATGATATAAAAGTGC+AGG | - | chr8_3:27806027-27806046 | Msa1284770:intron | 30.0% |
| ! | AGTTTTTGCCAAAATTACAG+TGG | - | chr8_3:27806115-27806134 | Msa1284770:intron | 30.0% |
| CATGTGTTTAACTAATAGTG+TGG | - | chr8_3:27806155-27806174 | Msa1284770:intron | 30.0% | |
| TTGTGGAAAAGAACAATAAC+CGG | - | chr8_3:27806283-27806302 | Msa1284770:intron | 30.0% | |
| TTTCCAGTAGCAATATATGA+TGG | - | chr8_3:27806434-27806453 | Msa1284770:five_prime_UTR | 30.0% | |
| !! | ATTTTCATTCTAGTTGACCA+TGG | + | chr8_3:27806819-27806838 | None:intergenic | 30.0% |
| !! | TACGAGAAGCCATTATTTTA+AGG | - | chr8_3:27807090-27807109 | Msa1284770:intron | 30.0% |
| TATCTTGAGTACTCTGATAT+AGG | - | chr8_3:27807277-27807296 | Msa1284770:intron | 30.0% | |
| TTATTCTTCAAATGTTTGCC+AGG | - | chr8_3:27807482-27807501 | Msa1284770:intron | 30.0% | |
| ATCAAAGATGGACAAGTTAT+AGG | - | chr8_3:27807570-27807589 | Msa1284770:intron | 30.0% | |
| TTATAGGTTATGTGGATCAA+TGG | - | chr8_3:27807586-27807605 | Msa1284770:intron | 30.0% | |
| TATAGGTTATGTGGATCAAT+GGG | - | chr8_3:27807587-27807606 | Msa1284770:intron | 30.0% | |
| !! | GATATTTGACTTGAGTAGTT+TGG | - | chr8_3:27807765-27807784 | Msa1284770:intron | 30.0% |
| ATGCTTCCATTAATTAAGAG+TGG | - | chr8_3:27807843-27807862 | Msa1284770:intron | 30.0% | |
| ATAGACTAATTTGAAGGCTA+TGG | - | chr8_3:27808006-27808025 | Msa1284770:five_prime_UTR | 30.0% | |
| GCAACAGAAATTAAATCAAC+AGG | + | chr8_3:27808048-27808067 | None:intergenic | 30.0% | |
| GTGATTATTTGATTCATAGC+AGG | - | chr8_3:27808162-27808181 | Msa1284770:five_prime_UTR | 30.0% | |
| ! | ATTTACCCTTTTGACATGTA+AGG | + | chr8_3:27808417-27808436 | None:intergenic | 30.0% |
| TAAATATCGTTAGACTGGAA+CGG | - | chr8_3:27808432-27808451 | Msa1284770:five_prime_UTR | 30.0% | |
| TTTCTAACAACACAAACTCT+TGG | + | chr8_3:27808722-27808741 | None:intergenic | 30.0% | |
| ! | ATGATAGTTATGTTTTCGAC+TGG | - | chr8_3:27808749-27808768 | Msa1284770:intron | 30.0% |
| ! | TGATAGTTATGTTTTCGACT+GGG | - | chr8_3:27808750-27808769 | Msa1284770:intron | 30.0% |
| GCTAACCAAAAAGGAAAATT+CGG | + | chr8_3:27808843-27808862 | None:intergenic | 30.0% | |
| CATTATGTTGCTAACCAAAA+AGG | + | chr8_3:27808852-27808871 | None:intergenic | 30.0% | |
| GGAAAATGGTTCAAGATAAT+TGG | + | chr8_3:27808882-27808901 | None:intergenic | 30.0% | |
| TCTGCAAGAATACAAAATGT+AGG | + | chr8_3:27809010-27809029 | None:intergenic | 30.0% | |
| GTGGTAGAGTTAAGATAAAA+AGG | + | chr8_3:27809105-27809124 | None:intergenic | 30.0% | |
| AGTTAAAATGGAGTGAATAG+TGG | + | chr8_3:27809124-27809143 | None:intergenic | 30.0% | |
| ! | TTGGGTCATTTGAGTTAAAA+TGG | + | chr8_3:27809136-27809155 | None:intergenic | 30.0% |
| ! | TTGCTGTTGATGAATACTTT+GGG | - | chr8_3:27809382-27809401 | Msa1284770:intron | 30.0% |
| ! | ATAGATGCACCAATTTTCTT+TGG | + | chr8_3:27809413-27809432 | None:intergenic | 30.0% |
| !! | ATGGTCTAGATTTTGGAAAT+CGG | + | chr8_3:27809511-27809530 | None:intergenic | 30.0% |
| ATTTCCAAAATCTAGACCAT+GGG | - | chr8_3:27809511-27809530 | Msa1284770:five_prime_UTR | 30.0% | |
| CCTCTCTACAAAAGAAAAAT+TGG | + | chr8_3:27809815-27809834 | None:intergenic | 30.0% | |
| ! | CCAATTTTTCTTTTGTAGAG+AGG | - | chr8_3:27809812-27809831 | Msa1284770:intron | 30.0% |
| TTATGATCATTTCCAAGAAC+AGG | + | chr8_3:27809894-27809913 | None:intergenic | 30.0% | |
| ATTCACTTCATAGTTCTTAC+TGG | + | chr8_3:27809939-27809958 | None:intergenic | 30.0% | |
| TAGAAAGATGTCACATTGTA+GGG | + | chr8_3:27810083-27810102 | None:intergenic | 30.0% | |
| ACGTGAATAGCAAAGAAAAT+AGG | + | chr8_3:27810190-27810209 | None:intergenic | 30.0% | |
| !! | AATACTGAAAGCATTTCAGA+AGG | - | chr8_3:27810306-27810325 | Msa1284770:intron | 30.0% |
| !! | ATACTGAAAGCATTTCAGAA+GGG | - | chr8_3:27810307-27810326 | Msa1284770:intron | 30.0% |
| GCAAAATAACATCTTGTCTT+TGG | - | chr8_3:27810539-27810558 | Msa1284770:intron | 30.0% | |
| ACTTGGTTGACATAAAATTG+TGG | + | chr8_3:27810606-27810625 | None:intergenic | 30.0% | |
| ATGTTGGAAAAAAGATGAAC+CGG | + | chr8_3:27810677-27810696 | None:intergenic | 30.0% | |
| !!! | TTCATCTTTTTTCCAACATC+TGG | - | chr8_3:27810678-27810697 | Msa1284770:intron | 30.0% |
| ! | TTGTTGGAAAAGGGAAGTTT+TGG | + | chr8_3:27804068-27804087 | None:intergenic | 35.0% |
| !! | ATCCTTTTAGTTGAGTGCTT+TGG | - | chr8_3:27804111-27804130 | Msa1284770:intron | 35.0% |
| TGAAAATGGATCGATCAACA+GGG | + | chr8_3:27804177-27804196 | None:intergenic | 35.0% | |
| ATGAAAATGGATCGATCAAC+AGG | + | chr8_3:27804178-27804197 | None:intergenic | 35.0% | |
| !! | GATTATTGAGTTTTGATCGG+TGG | - | chr8_3:27804296-27804315 | Msa1284770:three_prime_UTR | 35.0% |
| CGGTGGAAAAAATTGAGAAT+TGG | - | chr8_3:27804313-27804332 | Msa1284770:three_prime_UTR | 35.0% | |
| TGAATTGGGTGTTCTTATTG+AGG | - | chr8_3:27804493-27804512 | Msa1284770:intron | 35.0% | |
| AGATAGTGATCCTATGATAG+AGG | - | chr8_3:27804649-27804668 | Msa1284770:intron | 35.0% | |
| ! | GCATTTATTGTCATTTCTGC+AGG | - | chr8_3:27804774-27804793 | Msa1284770:intron | 35.0% |
| TGTAAAGTGCATACAAGGAT+TGG | - | chr8_3:27804807-27804826 | Msa1284770:intron | 35.0% | |
| !! | ATCAACTATGGTTTTTGAGC+CGG | + | chr8_3:27805005-27805024 | None:intergenic | 35.0% |
| ! | CGTGAATAGAAAGTATGACT+AGG | - | chr8_3:27805041-27805060 | Msa1284770:intron | 35.0% |
| AAGCATCAGTCATTCACTTA+TGG | + | chr8_3:27805098-27805117 | None:intergenic | 35.0% | |
| ! | TGAATGACTGATGCTTTTGT+AGG | - | chr8_3:27805102-27805121 | Msa1284770:intron | 35.0% |
| ! | GCAGTTTTACTTGATCAATG+AGG | - | chr8_3:27805345-27805364 | Msa1284770:three_prime_UTR | 35.0% |
| ! | GACTAAAGTGCCCAATATAA+TGG | - | chr8_3:27805686-27805705 | Msa1284770:intron | 35.0% |
| ! | GACTAAAGTGCCCAATATAA+TGG | - | chr8_3:27805686-27805705 | Msa1284770:intron | 35.0% |
| !! | ACAATGTGCCACTGTAATTT+TGG | + | chr8_3:27806126-27806145 | None:intergenic | 35.0% |
| AAGAATATGTTGTCTTCCTC+AGG | + | chr8_3:27806265-27806284 | None:intergenic | 35.0% | |
| AGGAAGACAACATATTCTTG+TGG | - | chr8_3:27806266-27806285 | Msa1284770:intron | 35.0% | |
| ATTGAAACACTTGACCTTCA+TGG | + | chr8_3:27806370-27806389 | None:intergenic | 35.0% | |
| GATCCATCATATATTGCTAC+TGG | + | chr8_3:27806440-27806459 | None:intergenic | 35.0% | |
| !!! | CTTTTAGGATTGCTTCAATG+AGG | - | chr8_3:27806557-27806576 | Msa1284770:intron | 35.0% |
| GTTCTTCATTGTTGCCTAAT+TGG | - | chr8_3:27806594-27806613 | Msa1284770:intron | 35.0% | |
| TGTATGAGTACATGACAAGA+GGG | - | chr8_3:27806649-27806668 | Msa1284770:intron | 35.0% | |
| ! | TTCTTTGTTGTGATTCAAGC+AGG | - | chr8_3:27806777-27806796 | Msa1284770:intron | 35.0% |
| ACTGCACACTAATCCAAATT+GGG | + | chr8_3:27806935-27806954 | None:intergenic | 35.0% | |
| AACTGCACACTAATCCAAAT+TGG | + | chr8_3:27806936-27806955 | None:intergenic | 35.0% | |
| ATGTTACCCTAGATGAAGAT+TGG | + | chr8_3:27807190-27807209 | None:intergenic | 35.0% | |
| ACAACGTAAAATTACCCTAG+TGG | + | chr8_3:27807318-27807337 | None:intergenic | 35.0% | |
| TATGTTGTCATGTGACTGTA+AGG | - | chr8_3:27807337-27807356 | Msa1284770:intron | 35.0% | |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr8_3:27807389-27807408 | None:intergenic | 35.0% |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr8_3:27807388-27807407 | Msa1284770:intron | 35.0% | |
| AAGAATAAAAAAGGGCAACC+CGG | + | chr8_3:27807470-27807489 | None:intergenic | 35.0% | |
| TGCAAAAAATACGACAAACC+TGG | + | chr8_3:27807503-27807522 | None:intergenic | 35.0% | |
| TGGACAAGTTATAGGTTATG+TGG | - | chr8_3:27807578-27807597 | Msa1284770:intron | 35.0% | |
| ATAGGTTATGTGGATCAATG+GGG | - | chr8_3:27807588-27807607 | Msa1284770:intron | 35.0% | |
| ATTGCAAGATCACCTTAACA+GGG | + | chr8_3:27807623-27807642 | None:intergenic | 35.0% | |
| AATTGCAAGATCACCTTAAC+AGG | + | chr8_3:27807624-27807643 | None:intergenic | 35.0% | |
| AAGCAGTAACTATTTGCAAC+TGG | + | chr8_3:27808113-27808132 | None:intergenic | 35.0% | |
| GCTTGAGCTATATGATCAAA+TGG | - | chr8_3:27808129-27808148 | Msa1284770:intron | 35.0% | |
| AAGGGTAAATATCGTTAGAC+TGG | - | chr8_3:27808427-27808446 | Msa1284770:five_prime_UTR | 35.0% | |
| AAATATCGTTAGACTGGAAC+GGG | - | chr8_3:27808433-27808452 | Msa1284770:five_prime_UTR | 35.0% | |
| TGACTAACCAAGTGATAAAC+TGG | + | chr8_3:27808557-27808576 | None:intergenic | 35.0% | |
| ! | TGATCCTTTTGGTATGCTTT+TGG | - | chr8_3:27808595-27808614 | Msa1284770:five_prime_UTR | 35.0% |
| ! | AACACCAAAAGCATACCAAA+AGG | + | chr8_3:27808602-27808621 | None:intergenic | 35.0% |
| ! | TATGTTTTCGACTGGGTTAA+AGG | - | chr8_3:27808757-27808776 | Msa1284770:intron | 35.0% |
| ! | TCAAGCCGAATTTTCCTTTT+TGG | - | chr8_3:27808835-27808854 | Msa1284770:intron | 35.0% |
| AATTGTACACTATCTTGACG+AGG | - | chr8_3:27808977-27808996 | Msa1284770:intron | 35.0% | |
| ATAAACATTGCAGCTGTATC+GGG | + | chr8_3:27809234-27809253 | None:intergenic | 35.0% | |
| GATAAACATTGCAGCTGTAT+CGG | + | chr8_3:27809235-27809254 | None:intergenic | 35.0% | |
| TGTCGATGAATCAAGTTCAT+CGG | - | chr8_3:27809305-27809324 | Msa1284770:intron | 35.0% | |
| ! | CAAGTTCATCGGTTAATGAT+AGG | - | chr8_3:27809316-27809335 | Msa1284770:intron | 35.0% |
| ! | GCAACTACATCTTCATTTTC+AGG | + | chr8_3:27809366-27809385 | None:intergenic | 35.0% |
| ! | GTTGCTGTTGATGAATACTT+TGG | - | chr8_3:27809381-27809400 | Msa1284770:intron | 35.0% |
| TGGGCAATACCAAAGAAAAT+TGG | - | chr8_3:27809401-27809420 | Msa1284770:intron | 35.0% | |
| AAAATTGGTGCATCTATGCA+TGG | - | chr8_3:27809416-27809435 | Msa1284770:intron | 35.0% | |
| GATTTCCAAAATCTAGACCA+TGG | - | chr8_3:27809510-27809529 | Msa1284770:five_prime_UTR | 35.0% | |
| TTTCCAAAATCTAGACCATG+GGG | - | chr8_3:27809512-27809531 | Msa1284770:five_prime_UTR | 35.0% | |
| CAAATGCACAGTACATGAAA+TGG | + | chr8_3:27809630-27809649 | None:intergenic | 35.0% | |
| TTCAGGAAGGTAAATGTCAA+CGG | - | chr8_3:27809656-27809675 | Msa1284770:intron | 35.0% | |
| ! | ACAGAACAATATGGTTCTGT+GGG | + | chr8_3:27809690-27809709 | None:intergenic | 35.0% |
| ! | AACAGAACAATATGGTTCTG+TGG | + | chr8_3:27809691-27809710 | None:intergenic | 35.0% |
| CATATAATGTGTTCAGTGCT+AGG | - | chr8_3:27809736-27809755 | Msa1284770:intron | 35.0% | |
| AAATGCAAACCCTATCCAAA+AGG | + | chr8_3:27809775-27809794 | None:intergenic | 35.0% | |
| AGAAAGATGTCACATTGTAG+GGG | + | chr8_3:27810082-27810101 | None:intergenic | 35.0% | |
| GTAGAAAGATGTCACATTGT+AGG | + | chr8_3:27810084-27810103 | None:intergenic | 35.0% | |
| CATGCAAAGAAGTAAGATAC+TGG | + | chr8_3:27810225-27810244 | None:intergenic | 35.0% | |
| TTCTTTGCATGTTGCTCATA+TGG | - | chr8_3:27810234-27810253 | Msa1284770:intron | 35.0% | |
| !! | TACTGAAAGCATTTCAGAAG+GGG | - | chr8_3:27810308-27810327 | Msa1284770:intron | 35.0% |
| ACATAAAATTGTGGTAGGAG+TGG | + | chr8_3:27810597-27810616 | None:intergenic | 35.0% | |
| GGTTGACATAAAATTGTGGT+AGG | + | chr8_3:27810602-27810621 | None:intergenic | 35.0% | |
| AAGTTGTTCAGCTTCTTGAA+CGG | - | chr8_3:27810622-27810641 | Msa1284770:intron | 35.0% | |
| CATTGAACTAAACACACTTC+CGG | - | chr8_3:27810655-27810674 | Msa1284770:intron | 35.0% | |
| !!! | TTTTTTCCAACATCTGGATG+TGG | - | chr8_3:27810684-27810703 | Msa1284770:intron | 35.0% |
| ! | TTTTTCCAACATCTGGATGT+GGG | - | chr8_3:27810685-27810704 | Msa1284770:intron | 35.0% |
| ! | CTCCAAAGCACTCAACTAAA+AGG | + | chr8_3:27804116-27804135 | None:intergenic | 40.0% |
| !! | TTTAGTTGAGTGCTTTGGAG+TGG | - | chr8_3:27804116-27804135 | Msa1284770:intron | 40.0% |
| ! | TGAGAATTGGTTTAGTGGGT+CGG | - | chr8_3:27804326-27804345 | Msa1284770:three_prime_UTR | 40.0% |
| TAGTGATCCTATGATAGAGG+TGG | - | chr8_3:27804652-27804671 | Msa1284770:intron | 40.0% | |
| ATCCTATGATAGAGGTGGTT+TGG | - | chr8_3:27804657-27804676 | Msa1284770:intron | 40.0% | |
| TCCTATGATAGAGGTGGTTT+GGG | - | chr8_3:27804658-27804677 | Msa1284770:intron | 40.0% | |
| ! | GGTAAGAGTTCATTTTCCAG+AGG | - | chr8_3:27804708-27804727 | Msa1284770:intron | 40.0% |
| ! | AGCTGAGCATTTAAAACCTC+TGG | + | chr8_3:27804727-27804746 | None:intergenic | 40.0% |
| AGTGCAAAGGAAGAGATTGT+GGG | - | chr8_3:27805320-27805339 | Msa1284770:three_prime_UTR | 40.0% | |
| GAACAAAACATGACTGTGAG+TGG | + | chr8_3:27805598-27805617 | None:intergenic | 40.0% | |
| GAACAAAACATGACTGTGAG+TGG | + | chr8_3:27805598-27805617 | None:intergenic | 40.0% | |
| ! | GATTGATGGTTCAGTGAGAT+TGG | - | chr8_3:27805747-27805766 | Msa1284770:intron | 40.0% |
| !! | TGGTATATCTGCTTTTCCTG+AGG | - | chr8_3:27806246-27806265 | Msa1284770:intron | 40.0% |
| ! | AAGCACTGTATCTTTGCTTC+CGG | + | chr8_3:27806305-27806324 | None:intergenic | 40.0% |
| ! | TCTGATTTTCTCAGCTGCTT+TGG | - | chr8_3:27806515-27806534 | Msa1284770:five_prime_UTR | 40.0% |
| CCTCACAACAGTATCCAATT+AGG | + | chr8_3:27806611-27806630 | None:intergenic | 40.0% | |
| CCTAATTGGATACTGTTGTG+AGG | - | chr8_3:27806608-27806627 | Msa1284770:intron | 40.0% | |
| AATTGGATACTGTTGTGAGG+AGG | - | chr8_3:27806611-27806630 | Msa1284770:intron | 40.0% | |
| GTGTATGAGTACATGACAAG+AGG | - | chr8_3:27806648-27806667 | Msa1284770:intron | 40.0% | |
| GATACTCTGCTACATTACCA+TGG | - | chr8_3:27806799-27806818 | Msa1284770:intron | 40.0% | |
| AATTGCATTAGGTGCAGCTA+AGG | - | chr8_3:27806836-27806855 | Msa1284770:intron | 40.0% | |
| ATTGCATTAGGTGCAGCTAA+GGG | - | chr8_3:27806837-27806856 | Msa1284770:intron | 40.0% | |
| TCAACAGGTATGACCCAATT+TGG | - | chr8_3:27806919-27806938 | Msa1284770:intron | 40.0% | |
| ! | CGTGTTTGTTGAAACGTTAG+AGG | - | chr8_3:27807024-27807043 | Msa1284770:intron | 40.0% |
| TGCTTTGCCAATCTTCATCT+AGG | - | chr8_3:27807180-27807199 | Msa1284770:intron | 40.0% | |
| GCTTTGCCAATCTTCATCTA+GGG | - | chr8_3:27807181-27807200 | Msa1284770:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr8_3:27807382-27807401 | Msa1284770:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr8_3:27807383-27807402 | Msa1284770:intron | 40.0% | |
| CAGGGTGATATGATCAAAGA+TGG | - | chr8_3:27807558-27807577 | Msa1284770:intron | 40.0% | |
| TCTGTTGCTCTTTCTTAGCA+TGG | - | chr8_3:27808060-27808079 | Msa1284770:intron | 40.0% | |
| ! | CTCTTTGCTAGTTTAAGCCT+TGG | + | chr8_3:27808390-27808409 | None:intergenic | 40.0% |
| CAAGGCTTAAACTAGCAAAG+AGG | - | chr8_3:27808388-27808407 | Msa1284770:five_prime_UTR | 40.0% | |
| ACCTACTCCAGTTTATCACT+TGG | - | chr8_3:27808547-27808566 | Msa1284770:five_prime_UTR | 40.0% | |
| ACCAAGTGATAAACTGGAGT+AGG | + | chr8_3:27808551-27808570 | None:intergenic | 40.0% | |
| GAACAAAGTATAGGCAGAGA+AGG | + | chr8_3:27808799-27808818 | None:intergenic | 40.0% | |
| !! | TTGCAGAGTGTTGCAAAGAT+GGG | - | chr8_3:27809023-27809042 | Msa1284770:intron | 40.0% |
| TAACTCAAATGACCCAATGC+AGG | - | chr8_3:27809139-27809158 | Msa1284770:intron | 40.0% | |
| AACTCAAATGACCCAATGCA+GGG | - | chr8_3:27809140-27809159 | Msa1284770:intron | 40.0% | |
| CAATCTCTGCATGGATTTCA+TGG | + | chr8_3:27809266-27809285 | None:intergenic | 40.0% | |
| AGTCAGAAACAATCTCTGCA+TGG | + | chr8_3:27809275-27809294 | None:intergenic | 40.0% | |
| !! | TGCAGAGATTGTTTCTGACT+TGG | - | chr8_3:27809275-27809294 | Msa1284770:intron | 40.0% |
| !! | GCAGAGATTGTTTCTGACTT+GGG | - | chr8_3:27809276-27809295 | Msa1284770:intron | 40.0% |
| ! | GTGCATCTATGCATGGATTA+AGG | - | chr8_3:27809423-27809442 | Msa1284770:intron | 40.0% |
| !! | CTAGATTTTGGAAATCGGCT+AGG | + | chr8_3:27809506-27809525 | None:intergenic | 40.0% |
| TTCCAAAATCTAGACCATGG+GGG | - | chr8_3:27809513-27809532 | Msa1284770:five_prime_UTR | 40.0% | |
| !! | CTGTGCATTTGCTTTGTTTC+AGG | - | chr8_3:27809639-27809658 | Msa1284770:intron | 40.0% |
| !! | GCATTTGCTTTGTTTCAGGA+AGG | - | chr8_3:27809643-27809662 | Msa1284770:intron | 40.0% |
| ! | CAGAACAATATGGTTCTGTG+GGG | + | chr8_3:27809689-27809708 | None:intergenic | 40.0% |
| AAACCCTATCCAAAAGGACT+GGG | + | chr8_3:27809769-27809788 | None:intergenic | 40.0% | |
| CATGTTGCTCATATGGTGAA+TGG | - | chr8_3:27810241-27810260 | Msa1284770:intron | 40.0% | |
| ! | GGAGCACCAAAAATACTTGA+CGG | - | chr8_3:27810477-27810496 | Msa1284770:intron | 40.0% |
| GAGCACCAAAAATACTTGAC+GGG | - | chr8_3:27810478-27810497 | Msa1284770:intron | 40.0% | |
| AGCACCAAAAATACTTGACG+GGG | - | chr8_3:27810479-27810498 | Msa1284770:intron | 40.0% | |
| ! | ATGTCCCCGTCAAGTATTTT+TGG | + | chr8_3:27810486-27810505 | None:intergenic | 40.0% |
| GTTCAAGAAGCTGAACAACT+TGG | + | chr8_3:27810623-27810642 | None:intergenic | 40.0% | |
| AGTTGTTCAGCTTCTTGAAC+GGG | - | chr8_3:27810623-27810642 | Msa1284770:intron | 40.0% | |
| !! | AGGGAGTCTGATTTGTTGTG+GGG | + | chr8_3:27804000-27804019 | None:intergenic | 45.0% |
| !! | GAGGGAGTCTGATTTGTTGT+GGG | + | chr8_3:27804001-27804020 | None:intergenic | 45.0% |
| AAAGGGACGACAATGAGAGA+GGG | + | chr8_3:27804024-27804043 | None:intergenic | 45.0% | |
| ACCCAAACCACCTCTATCAT+AGG | + | chr8_3:27804662-27804681 | None:intergenic | 45.0% | |
| ! | TATGATAGAGGTGGTTTGGG+TGG | - | chr8_3:27804661-27804680 | Msa1284770:intron | 45.0% |
| ! | CTTCTGCTTGCTAGAGACAA+GGG | - | chr8_3:27804889-27804908 | Msa1284770:intron | 45.0% |
| ! | TTCTGCTTGCTAGAGACAAG+GGG | - | chr8_3:27804890-27804909 | Msa1284770:intron | 45.0% |
| TACCATCCAGATGAGTGCAA+AGG | - | chr8_3:27805307-27805326 | Msa1284770:three_prime_UTR | 45.0% | |
| TTCCTTTGCACTCATCTGGA+TGG | + | chr8_3:27805312-27805331 | None:intergenic | 45.0% | |
| TCTCTTCCTTTGCACTCATC+TGG | + | chr8_3:27805316-27805335 | None:intergenic | 45.0% | |
| GAGTGCAAAGGAAGAGATTG+TGG | - | chr8_3:27805319-27805338 | Msa1284770:three_prime_UTR | 45.0% | |
| GTGCAAAGGAAGAGATTGTG+GGG | - | chr8_3:27805321-27805340 | Msa1284770:three_prime_UTR | 45.0% | |
| TGATTGGACTGTCAGATGAG+TGG | - | chr8_3:27806217-27806236 | Msa1284770:intron | 45.0% | |
| TGTCAGATGAGTGGTGATTC+TGG | - | chr8_3:27806226-27806245 | Msa1284770:intron | 45.0% | |
| GGCTCTGCTTAACAATCAAC+AGG | - | chr8_3:27806904-27806923 | Msa1284770:intron | 45.0% | |
| CTTCTCGTATACGTTCGTAC+AGG | + | chr8_3:27807079-27807098 | None:intergenic | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | - | chr8_3:27807343-27807362 | Msa1284770:intron | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | - | chr8_3:27807344-27807363 | Msa1284770:intron | 45.0% | |
| ! | TACACAAGAGGCTGTTTCCA+AGG | + | chr8_3:27807377-27807396 | None:intergenic | 45.0% |
| CGTACAATACACCCAATGGT+GGG | - | chr8_3:27807414-27807433 | Msa1284770:intron | 45.0% | |
| GAAAGTCAGGAGCTGTACTT+AGG | + | chr8_3:27807666-27807685 | None:intergenic | 45.0% | |
| TCAAACCTTGCAGTCAGATG+TGG | - | chr8_3:27807694-27807713 | Msa1284770:intron | 45.0% | |
| CAACAGGACATGAGAGAGTA+AGG | + | chr8_3:27808032-27808051 | None:intergenic | 45.0% | |
| ! | TGTGCAGGTTGAGATTGTGA+TGG | - | chr8_3:27808265-27808284 | Msa1284770:five_prime_UTR | 45.0% |
| ! | GTGCAGGTTGAGATTGTGAT+GGG | - | chr8_3:27808266-27808285 | Msa1284770:five_prime_UTR | 45.0% |
| ! | TGAGATTGTGATGGGACTTG+AGG | - | chr8_3:27808274-27808293 | Msa1284770:five_prime_UTR | 45.0% |
| ATGGGACTTGAGGTGGAATT+TGG | - | chr8_3:27808284-27808303 | Msa1284770:five_prime_UTR | 45.0% | |
| GGTGGAATTTGGCATTAGTG+TGG | - | chr8_3:27808295-27808314 | Msa1284770:five_prime_UTR | 45.0% | |
| CATGTCAGCAGCTTCTTGAA+CGG | + | chr8_3:27808348-27808367 | None:intergenic | 45.0% | |
| TGACAAGCTTCTTGAGACCA+AGG | - | chr8_3:27808370-27808389 | Msa1284770:five_prime_UTR | 45.0% | |
| GGCTTAAACTAGCAAAGAGG+AGG | - | chr8_3:27808391-27808410 | Msa1284770:five_prime_UTR | 45.0% | |
| AGGAGGCCTTACATGTCAAA+AGG | - | chr8_3:27808408-27808427 | Msa1284770:five_prime_UTR | 45.0% | |
| GGAGGCCTTACATGTCAAAA+GGG | - | chr8_3:27808409-27808428 | Msa1284770:five_prime_UTR | 45.0% | |
| !! | CTGGAACGGGAAATTTTGAC+TGG | - | chr8_3:27808446-27808465 | Msa1284770:five_prime_UTR | 45.0% |
| ! | ACACACACAACACACGCTTT+TGG | + | chr8_3:27808482-27808501 | None:intergenic | 45.0% |
| GGTTAGCAACATAATGCACG+TGG | - | chr8_3:27808856-27808875 | Msa1284770:intron | 45.0% | |
| !! | CTTGCAGAGTGTTGCAAAGA+TGG | - | chr8_3:27809022-27809041 | Msa1284770:intron | 45.0% |
| TATGTCATGCACAGCGAACA+TGG | - | chr8_3:27809051-27809070 | Msa1284770:intron | 45.0% | |
| CAAAATCAGAGCCCTGCATT+GGG | + | chr8_3:27809154-27809173 | None:intergenic | 45.0% | |
| ACAAAATCAGAGCCCTGCAT+TGG | + | chr8_3:27809155-27809174 | None:intergenic | 45.0% | |
| ! | CTGATTTTGTATGTTGCCGC+TGG | - | chr8_3:27809165-27809184 | Msa1284770:intron | 45.0% |
| ! | TGGTGCACTACAAGAAGCAT+TGG | - | chr8_3:27809185-27809204 | Msa1284770:intron | 45.0% |
| CATGGATTTCATGGCATGCA+AGG | + | chr8_3:27809257-27809276 | None:intergenic | 45.0% | |
| ! | GGATAATACCCCAGTCCTTT+TGG | - | chr8_3:27809757-27809776 | Msa1284770:intron | 45.0% |
| ! | ATACCCCAGTCCTTTTGGAT+AGG | - | chr8_3:27809762-27809781 | Msa1284770:intron | 45.0% |
| ! | TACCCCAGTCCTTTTGGATA+GGG | - | chr8_3:27809763-27809782 | Msa1284770:intron | 45.0% |
| AACCCTATCCAAAAGGACTG+GGG | + | chr8_3:27809768-27809787 | None:intergenic | 45.0% | |
| CAAACCCTATCCAAAAGGAC+TGG | + | chr8_3:27809770-27809789 | None:intergenic | 45.0% | |
| GAACAGGTGCAGTCAAATGA+TGG | + | chr8_3:27809878-27809897 | None:intergenic | 45.0% | |
| CATTTGACTGCACCTGTTCT+TGG | - | chr8_3:27809879-27809898 | Msa1284770:intron | 45.0% | |
| !! | GAAAGCATTTCAGAAGGGGA+AGG | - | chr8_3:27810312-27810331 | Msa1284770:intron | 45.0% |
| GGACATGTTGACACAGTTTC+TGG | - | chr8_3:27810500-27810519 | Msa1284770:intron | 45.0% | |
| !! | GTCTTTGGAACCACTTGATG+CGG | - | chr8_3:27810554-27810573 | Msa1284770:intron | 45.0% |
| !! | CTTGCTTTTACCGCATCAAG+TGG | + | chr8_3:27810567-27810586 | None:intergenic | 45.0% |
| TACTTCCCACATCCAGATGT+TGG | + | chr8_3:27810693-27810712 | None:intergenic | 45.0% | |
| ! | AGTACCGGAGAAGAATTCGC+CGG | - | chr8_3:27803959-27803978 | Msa1284770:three_prime_UTR | 50.0% |
| !! | GGAGGGAGTCTGATTTGTTG+TGG | + | chr8_3:27804002-27804021 | None:intergenic | 50.0% |
| AAGGGACGACAATGAGAGAG+GGG | + | chr8_3:27804023-27804042 | None:intergenic | 50.0% | |
| GAAAGGGACGACAATGAGAG+AGG | + | chr8_3:27804025-27804044 | None:intergenic | 50.0% | |
| TGGATCGATCAACAGGGAAG+AGG | + | chr8_3:27804171-27804190 | None:intergenic | 50.0% | |
| ! | GCTTCTGCTTGCTAGAGACA+AGG | - | chr8_3:27804888-27804907 | Msa1284770:intron | 50.0% |
| ATTAGGCTAAGTAGCGCTGC+CGG | - | chr8_3:27804983-27805002 | Msa1284770:three_prime_UTR | 50.0% | |
| GTACATGACAAGAGGGAGCT+TGG | - | chr8_3:27806656-27806675 | Msa1284770:intron | 50.0% | |
| GCTGCGTACAATACACCCAA+TGG | - | chr8_3:27807410-27807429 | Msa1284770:intron | 50.0% | |
| GCGTACAATACACCCAATGG+TGG | - | chr8_3:27807413-27807432 | Msa1284770:intron | 50.0% | |
| GTCAGGAGCTGTACTTAGGA+AGG | + | chr8_3:27807662-27807681 | None:intergenic | 50.0% | |
| ACCTTGCAGTCAGATGTGGA+TGG | - | chr8_3:27807698-27807717 | Msa1284770:intron | 50.0% | |
| TCCATCCACATCTGACTGCA+AGG | + | chr8_3:27807702-27807721 | None:intergenic | 50.0% | |
| TTGCAGTCAGATGTGGATGG+AGG | - | chr8_3:27807701-27807720 | Msa1284770:intron | 50.0% | |
| ! | GATTGTGATGGGACTTGAGG+TGG | - | chr8_3:27808277-27808296 | Msa1284770:five_prime_UTR | 50.0% |
| !! | TTGAACGGTGGTGATGGTCT+GGG | + | chr8_3:27808333-27808352 | None:intergenic | 50.0% |
| AGCTTCTTGAACGGTGGTGA+TGG | + | chr8_3:27808339-27808358 | None:intergenic | 50.0% | |
| !! | AGAGTGTTGCAAAGATGGGC+TGG | - | chr8_3:27809027-27809046 | Msa1284770:intron | 50.0% |
| TGCACAGCGAACATGGTATC+TGG | - | chr8_3:27809058-27809077 | Msa1284770:intron | 50.0% | |
| ACAGCGAACATGGTATCTGG+AGG | - | chr8_3:27809061-27809080 | Msa1284770:intron | 50.0% | |
| TGCTTCTTGTAGTGCACCAG+CGG | + | chr8_3:27809184-27809203 | None:intergenic | 50.0% | |
| ! | CACCCCCATGGTCTAGATTT+TGG | + | chr8_3:27809518-27809537 | None:intergenic | 50.0% |
| AAATCTAGACCATGGGGGTG+AGG | - | chr8_3:27809518-27809537 | Msa1284770:five_prime_UTR | 50.0% | |
| AATCTAGACCATGGGGGTGA+GGG | - | chr8_3:27809519-27809538 | Msa1284770:five_prime_UTR | 50.0% | |
| GAGGGAGGTAAAGAGCTCAA+CGG | - | chr8_3:27809537-27809556 | Msa1284770:intron | 50.0% | |
| TGAGCTCTTAGAAGCTGTGC+AGG | - | chr8_3:27809839-27809858 | Msa1284770:intron | 50.0% | |
| ATTTCAGAAGGGGAAGGCCA+TGG | - | chr8_3:27810318-27810337 | Msa1284770:intron | 50.0% | |
| GACGACAATGAGAGAGGGGA+GGG | + | chr8_3:27804019-27804038 | None:intergenic | 55.0% | |
| ! | TAGAGGTGGTTTGGGTGGCT+TGG | - | chr8_3:27804666-27804685 | Msa1284770:intron | 55.0% |
| ACTGTTGTGAGGAGGAGCAG+AGG | - | chr8_3:27806619-27806638 | Msa1284770:intron | 55.0% | |
| ! | TGAGGAGGAGCAGAGGCTTT+TGG | - | chr8_3:27806626-27806645 | Msa1284770:intron | 55.0% |
| TGTGAGAGCTGCAGTTGCTG+AGG | + | chr8_3:27806881-27806900 | None:intergenic | 55.0% | |
| AGGTCACGGGTTCAAGTCCT+TGG | - | chr8_3:27807357-27807376 | Msa1284770:intron | 55.0% | |
| GGGCACTTCACTCCCTGTTA+AGG | - | chr8_3:27807608-27807627 | Msa1284770:intron | 55.0% | |
| !! | CTTGAACGGTGGTGATGGTC+TGG | + | chr8_3:27808334-27808353 | None:intergenic | 55.0% |
| GTCAGCAGCTTCTTGAACGG+TGG | + | chr8_3:27808345-27808364 | None:intergenic | 55.0% | |
| !! | AGCATTGGCAGCTCTTCGTG+AGG | - | chr8_3:27809200-27809219 | Msa1284770:intron | 55.0% |
| ! | AGTGCCGGAGAAGAAGTCGC+CGG | - | chr8_3:27803925-27803944 | Msa1284770:three_prime_UTR | 60.0% |
| ACCGGAGAAGAATTCGCCGG+CGG | - | chr8_3:27803962-27803981 | Msa1284770:three_prime_UTR | 60.0% | |
| ACCGCCGGCGAATTCTTCTC+CGG | + | chr8_3:27803966-27803985 | None:intergenic | 60.0% | |
| GAGAAGAATTCGCCGGCGGT+GGG | - | chr8_3:27803966-27803985 | Msa1284770:three_prime_UTR | 60.0% | |
| GGACGACAATGAGAGAGGGG+AGG | + | chr8_3:27804020-27804039 | None:intergenic | 60.0% | |
| GCAACTGCAGCTCTCACAGC+AGG | - | chr8_3:27806883-27806902 | Msa1284770:intron | 60.0% | |
| TGATACGCAGGGTCCGGGAA+GGG | + | chr8_3:27807442-27807461 | None:intergenic | 60.0% | |
| ! | TGCACTGATACGCAGGGTCC+GGG | + | chr8_3:27807447-27807466 | None:intergenic | 60.0% |
| ! | GTGCACTGATACGCAGGGTC+CGG | + | chr8_3:27807448-27807467 | None:intergenic | 60.0% |
| GACCCTGCGTATCAGTGCAC+CGG | - | chr8_3:27807448-27807467 | Msa1284770:intron | 60.0% | |
| ACCCTGCGTATCAGTGCACC+GGG | - | chr8_3:27807449-27807468 | Msa1284770:intron | 60.0% | |
| ! | ACCCGGTGCACTGATACGCA+GGG | + | chr8_3:27807453-27807472 | None:intergenic | 60.0% |
| ! | AACCCGGTGCACTGATACGC+AGG | + | chr8_3:27807454-27807473 | None:intergenic | 60.0% |
| CTTTACCTCCCTCACCCCCA+TGG | + | chr8_3:27809530-27809549 | None:intergenic | 60.0% | |
| GGTCGAGGGAGAGAGAGGGA+GGG | - | chr8_3:27803899-27803918 | Msa1284770:three_prime_UTR | 65.0% | |
| ! | AGAGAGGGAGGGAGGAGTGC+CGG | - | chr8_3:27803910-27803929 | Msa1284770:three_prime_UTR | 65.0% |
| ACCGCCGGCGACTTCTTCTC+CGG | + | chr8_3:27803932-27803951 | None:intergenic | 65.0% | |
| GAGAAGAAGTCGCCGGCGGT+GGG | - | chr8_3:27803932-27803951 | Msa1284770:three_prime_UTR | 65.0% | |
| GGAGAAGAATTCGCCGGCGG+TGG | - | chr8_3:27803965-27803984 | Msa1284770:three_prime_UTR | 65.0% | |
| GAATTCGCCGGCGGTGGGAT+TGG | - | chr8_3:27803971-27803990 | Msa1284770:three_prime_UTR | 65.0% | |
| GGGGAATCCAATCCCACCGC+CGG | + | chr8_3:27803981-27804000 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+GGG | + | chr8_3:27807428-27807447 | None:intergenic | 65.0% | |
| ! | CCAATGGTGGGACCCCTTCC+CGG | - | chr8_3:27807426-27807445 | Msa1284770:intron | 65.0% |
| GATACGCAGGGTCCGGGAAG+GGG | + | chr8_3:27807441-27807460 | None:intergenic | 65.0% | |
| CTGATACGCAGGGTCCGGGA+AGG | + | chr8_3:27807443-27807462 | None:intergenic | 65.0% | |
| CTAGACCATGGGGGTGAGGG+AGG | - | chr8_3:27809522-27809541 | Msa1284770:intron | 65.0% | |
| GGGTCGAGGGAGAGAGAGGG+AGG | - | chr8_3:27803898-27803917 | Msa1284770:three_prime_UTR | 70.0% | |
| CGAGGGAGAGAGAGGGAGGG+AGG | - | chr8_3:27803902-27803921 | Msa1284770:three_prime_UTR | 70.0% | |
| GCCGGAGAAGAAGTCGCCGG+CGG | - | chr8_3:27803928-27803947 | Msa1284770:three_prime_UTR | 70.0% | |
| GGAGAAGAAGTCGCCGGCGG+TGG | - | chr8_3:27803931-27803950 | Msa1284770:three_prime_UTR | 70.0% | |
| AAGAAGTCGCCGGCGGTGGG+AGG | - | chr8_3:27803935-27803954 | Msa1284770:three_prime_UTR | 70.0% | |
| AGAAGTCGCCGGCGGTGGGA+GGG | - | chr8_3:27803936-27803955 | Msa1284770:three_prime_UTR | 70.0% | |
| CCGGGAAGGGGTCCCACCAT+TGG | + | chr8_3:27807429-27807448 | None:intergenic | 70.0% | |
| CCGGTACTCCCTCCCACCGC+CGG | + | chr8_3:27803947-27803966 | None:intergenic | 75.0% | |
| ! | CCGGCGGTGGGAGGGAGTAC+CGG | - | chr8_3:27803944-27803963 | Msa1284770:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 27803896 | 27810950 | 27803896 | ID=Msa1284770;Name=Msa1284770 |
| chr8_3 | mRNA | 27803896 | 27810950 | 27803896 | ID=Msa1284770-mRNA-1;Parent=Msa1284770;Name=Msa1284770-mRNA-1;_AED=0.10;_eAED=0.10;_QI=1391|1|1|1|0.14|0.26|15|627|115 |
| chr8_3 | exon | 27803896 | 27804067 | 27803896 | ID=Msa1284770-mRNA-1:exon:9468;Parent=Msa1284770-mRNA-1 |
| chr8_3 | exon | 27804130 | 27804375 | 27804130 | ID=Msa1284770-mRNA-1:exon:9467;Parent=Msa1284770-mRNA-1 |
| chr8_3 | exon | 27804908 | 27805016 | 27804908 | ID=Msa1284770-mRNA-1:exon:9466;Parent=Msa1284770-mRNA-1 |
| chr8_3 | exon | 27805303 | 27805685 | 27805303 | ID=Msa1284770-mRNA-1:exon:9465;Parent=Msa1284770-mRNA-1 |
| chr8_3 | exon | 27805764 | 27805817 | 27805764 | ID=Msa1284770-mRNA-1:exon:9464;Parent=Msa1284770-mRNA-1 |
| chr8_3 | exon | 27806416 | 27806574 | 27806416 | ID=Msa1284770-mRNA-1:exon:9463;Parent=Msa1284770-mRNA-1 |
| chr8_3 | exon | 27807124 | 27807139 | 27807124 | ID=Msa1284770-mRNA-1:exon:9462;Parent=Msa1284770-mRNA-1 |
| chr8_3 | exon | 27807217 | 27807285 | 27807217 | ID=Msa1284770-mRNA-1:exon:9461;Parent=Msa1284770-mRNA-1 |
| chr8_3 | exon | 27807921 | 27808047 | 27807921 | ID=Msa1284770-mRNA-1:exon:9460;Parent=Msa1284770-mRNA-1 |
| chr8_3 | exon | 27808150 | 27808614 | 27808150 | ID=Msa1284770-mRNA-1:exon:9459;Parent=Msa1284770-mRNA-1 |
| chr8_3 | exon | 27808798 | 27808841 | 27808798 | ID=Msa1284770-mRNA-1:exon:9458;Parent=Msa1284770-mRNA-1 |
| chr8_3 | exon | 27809471 | 27809539 | 27809471 | ID=Msa1284770-mRNA-1:exon:9457;Parent=Msa1284770-mRNA-1 |
| chr8_3 | exon | 27809904 | 27810050 | 27809904 | ID=Msa1284770-mRNA-1:exon:9456;Parent=Msa1284770-mRNA-1 |
| chr8_3 | exon | 27810138 | 27810201 | 27810138 | ID=Msa1284770-mRNA-1:exon:9455;Parent=Msa1284770-mRNA-1 |
| chr8_3 | exon | 27810709 | 27810950 | 27810709 | ID=Msa1284770-mRNA-1:exon:9454;Parent=Msa1284770-mRNA-1 |
| chr8_3 | five_prime_UTR | 27810709 | 27810950 | 27810709 | ID=Msa1284770-mRNA-1:five_prime_utr;Parent=Msa1284770-mRNA-1 |
| chr8_3 | five_prime_UTR | 27810138 | 27810201 | 27810138 | ID=Msa1284770-mRNA-1:five_prime_utr;Parent=Msa1284770-mRNA-1 |
| chr8_3 | five_prime_UTR | 27809904 | 27810050 | 27809904 | ID=Msa1284770-mRNA-1:five_prime_utr;Parent=Msa1284770-mRNA-1 |
| chr8_3 | five_prime_UTR | 27809471 | 27809539 | 27809471 | ID=Msa1284770-mRNA-1:five_prime_utr;Parent=Msa1284770-mRNA-1 |
| chr8_3 | five_prime_UTR | 27808798 | 27808841 | 27808798 | ID=Msa1284770-mRNA-1:five_prime_utr;Parent=Msa1284770-mRNA-1 |
| chr8_3 | five_prime_UTR | 27808150 | 27808614 | 27808150 | ID=Msa1284770-mRNA-1:five_prime_utr;Parent=Msa1284770-mRNA-1 |
| chr8_3 | five_prime_UTR | 27807921 | 27808047 | 27807921 | ID=Msa1284770-mRNA-1:five_prime_utr;Parent=Msa1284770-mRNA-1 |
| chr8_3 | five_prime_UTR | 27807217 | 27807285 | 27807217 | ID=Msa1284770-mRNA-1:five_prime_utr;Parent=Msa1284770-mRNA-1 |
| chr8_3 | five_prime_UTR | 27807124 | 27807139 | 27807124 | ID=Msa1284770-mRNA-1:five_prime_utr;Parent=Msa1284770-mRNA-1 |
| chr8_3 | five_prime_UTR | 27806427 | 27806574 | 27806427 | ID=Msa1284770-mRNA-1:five_prime_utr;Parent=Msa1284770-mRNA-1 |
| chr8_3 | CDS | 27806416 | 27806426 | 27806416 | ID=Msa1284770-mRNA-1:cds;Parent=Msa1284770-mRNA-1 |
| chr8_3 | CDS | 27805764 | 27805817 | 27805764 | ID=Msa1284770-mRNA-1:cds;Parent=Msa1284770-mRNA-1 |
| chr8_3 | CDS | 27805403 | 27805685 | 27805403 | ID=Msa1284770-mRNA-1:cds;Parent=Msa1284770-mRNA-1 |
| chr8_3 | three_prime_UTR | 27805303 | 27805402 | 27805303 | ID=Msa1284770-mRNA-1:three_prime_utr;Parent=Msa1284770-mRNA-1 |
| chr8_3 | three_prime_UTR | 27804908 | 27805016 | 27804908 | ID=Msa1284770-mRNA-1:three_prime_utr;Parent=Msa1284770-mRNA-1 |
| chr8_3 | three_prime_UTR | 27804130 | 27804375 | 27804130 | ID=Msa1284770-mRNA-1:three_prime_utr;Parent=Msa1284770-mRNA-1 |
| chr8_3 | three_prime_UTR | 27803896 | 27804067 | 27803896 | ID=Msa1284770-mRNA-1:three_prime_utr;Parent=Msa1284770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
