Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1286310 | XP_024627699.1 | 82.479 | 839 | 63 | 6 | 1 | 758 | 1 | 836 | 0.0 | 1195 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1286310 | A0A396GN91 | 82.479 | 839 | 63 | 6 | 1 | 758 | 1 | 836 | 0.0 | 1195 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1192450 | Msa1286310 | 0.917675 | 3.978145e-86 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1286310 | MtrunA17_Chr8g0361681 | 82.479 | 839 | 63 | 6 | 1 | 758 | 1 | 836 | 0.0 | 1195 |
| Msa1286310 | MtrunA17_Chr5g0417111 | 52.823 | 496 | 163 | 13 | 328 | 758 | 420 | 909 | 1.29e-144 | 447 |
| Msa1286310 | MtrunA17_Chr7g0217181 | 39.671 | 426 | 199 | 8 | 379 | 757 | 330 | 744 | 8.07e-92 | 303 |
| Msa1286310 | MtrunA17_Chr8g0361691 | 63.514 | 148 | 38 | 2 | 541 | 673 | 1 | 147 | 5.07e-54 | 184 |
| Msa1286310 | MtrunA17_Chr4g0000281 | 31.667 | 240 | 124 | 6 | 551 | 758 | 194 | 425 | 5.87e-27 | 114 |
| Msa1286310 | MtrunA17_Chr8g0391071 | 26.693 | 251 | 132 | 6 | 549 | 756 | 318 | 559 | 5.62e-14 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1286310 | AT5G39785.1 | 41.935 | 403 | 176 | 10 | 411 | 758 | 207 | 606 | 7.29e-89 | 292 |
| Msa1286310 | AT5G39785.3 | 41.935 | 403 | 176 | 10 | 411 | 758 | 207 | 606 | 7.29e-89 | 292 |
| Msa1286310 | AT5G39785.5 | 41.935 | 403 | 176 | 10 | 411 | 758 | 207 | 606 | 7.29e-89 | 292 |
| Msa1286310 | AT5G39785.2 | 41.337 | 404 | 178 | 9 | 411 | 758 | 207 | 607 | 3.80e-88 | 290 |
| Msa1286310 | AT1G69610.3 | 42.564 | 390 | 166 | 10 | 412 | 758 | 218 | 592 | 3.93e-83 | 276 |
| Msa1286310 | AT5G39785.4 | 40.421 | 428 | 172 | 12 | 411 | 758 | 207 | 631 | 6.78e-83 | 276 |
| Msa1286310 | AT1G69610.2 | 42.564 | 390 | 166 | 10 | 412 | 758 | 263 | 637 | 2.61e-82 | 275 |
| Msa1286310 | AT1G69610.1 | 42.564 | 390 | 166 | 10 | 412 | 758 | 262 | 636 | 2.66e-82 | 275 |
| Msa1286310 | AT3G20260.1 | 30.400 | 250 | 134 | 4 | 545 | 758 | 192 | 437 | 1.51e-26 | 114 |
| Msa1286310 | AT3G01175.1 | 26.940 | 464 | 230 | 18 | 372 | 757 | 143 | 575 | 3.39e-19 | 92.4 |
| Msa1286310 | AT1G73850.2 | 24.609 | 256 | 137 | 7 | 551 | 757 | 385 | 633 | 1.74e-18 | 90.5 |
| Msa1286310 | AT1G73850.1 | 24.609 | 256 | 137 | 7 | 551 | 757 | 385 | 633 | 1.74e-18 | 90.5 |
Find 107 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTATGTGGTTCATTCTA+TGG | 0.168026 | 8_3:+34142990 | Msa1286310:CDS |
| AACCTTTGATGGAAGAAATT+TGG | 0.171845 | 8_3:+34142779 | Msa1286310:five_prime_UTR |
| CTTGAGAGATTGATCATATA+TGG | 0.188250 | 8_3:+34142849 | Msa1286310:exon |
| AGGAGGACTTGCAACAATTT+TGG | 0.237380 | 8_3:+34144369 | Msa1286310:CDS |
| AGAAATGTTTCTTATGATAA+TGG | 0.238779 | 8_3:+34143932 | Msa1286310:CDS |
| TATCATAAGAAACATTTCTT+AGG | 0.248228 | 8_3:-34143928 | None:intergenic |
| CATGATTCATGAACCTTTGA+TGG | 0.248335 | 8_3:+34142768 | None:intergenic |
| TCTTTGACATGTAAGATTAT+AGG | 0.254165 | 8_3:+34144088 | Msa1286310:CDS |
| TGAAAATATAAAGGGTTCTT+TGG | 0.260528 | 8_3:+34143706 | Msa1286310:CDS |
| TGATCCTCACATACATATTC+AGG | 0.265707 | 8_3:+34143016 | Msa1286310:CDS |
| TTCTAGCATTGAAAATATAA+AGG | 0.270515 | 8_3:+34143697 | Msa1286310:CDS |
| TAGAAAGTGCATCATTTCTT+AGG | 0.278161 | 8_3:-34143679 | None:intergenic |
| TAATGAATTGCATAGGGATT+TGG | 0.281823 | 8_3:+34145766 | Msa1286310:CDS |
| CTTCAAGTTCCAATCATAAA+AGG | 0.287284 | 8_3:+34146022 | Msa1286310:CDS |
| TTGTCTATGAAAACTTGATT+TGG | 0.297848 | 8_3:+34142938 | Msa1286310:CDS |
| AGGAATCCATGCAAGTGTTT+TGG | 0.298411 | 8_3:+34146505 | Msa1286310:CDS |
| CGTAGGTATAATTTAGTTGC+TGG | 0.316010 | 8_3:+34145887 | Msa1286310:CDS |
| TCTTGTCAACAAAATTGATT+TGG | 0.318514 | 8_3:-34147088 | None:intergenic |
| GGTAATGGAACAAATCAAAT+TGG | 0.320087 | 8_3:+34144327 | Msa1286310:CDS |
| TTTCCCAAGAGAGACAAATT+TGG | 0.320432 | 8_3:-34145805 | None:intergenic |
| TGAGAAAAGATCATCTAATA+TGG | 0.344831 | 8_3:+34147048 | Msa1286310:CDS |
| TTAGTTCAACACAAAGATAT+TGG | 0.346942 | 8_3:+34143866 | Msa1286310:CDS |
| TTGGCCAAATTTGTCTCTCT+TGG | 0.350400 | 8_3:+34145801 | Msa1286310:CDS |
| TGTCTATGAAAACTTGATTT+GGG | 0.361387 | 8_3:+34142939 | Msa1286310:CDS |
| ACCCTATGGTCTTGCTGAAA+TGG | 0.370267 | 8_3:-34145959 | None:intergenic |
| TCTAGCATTGAAAATATAAA+GGG | 0.379257 | 8_3:+34143698 | Msa1286310:CDS |
| CATTAACAAGCTTCAACATT+GGG | 0.384723 | 8_3:-34145748 | None:intergenic |
| CAAGGAAGTTCAAGAATTAA+AGG | 0.389388 | 8_3:+34144150 | Msa1286310:CDS |
| TTTCAGGCCATGCATGCAAT+AGG | 0.397307 | 8_3:+34144553 | Msa1286310:CDS |
| ACTATTGGAGCATAATTTAG+AGG | 0.398182 | 8_3:+34143985 | Msa1286310:CDS |
| AGAAACAGAGTACTCTGTTC+TGG | 0.400740 | 8_3:+34143321 | Msa1286310:CDS |
| TGAAAACTTGATTTGGGCAT+TGG | 0.401931 | 8_3:+34142945 | Msa1286310:CDS |
| TGAAGAAGAGTTGGATGAAA+TGG | 0.405660 | 8_3:+34144252 | Msa1286310:CDS |
| TCCACCATCAAGATGAAAAT+CGG | 0.412118 | 8_3:-34143774 | None:intergenic |
| TGGCCAAATTTGTCTCTCTT+GGG | 0.416473 | 8_3:+34145802 | Msa1286310:CDS |
| GAAGTGGAAATTGCATAGTA+AGG | 0.420510 | 8_3:+34146922 | Msa1286310:CDS |
| AAATATAAAGAAGGAACTAT+TGG | 0.422373 | 8_3:+34143970 | Msa1286310:CDS |
| CCACATTGTTGAAATTCAAA+AGG | 0.423899 | 8_3:+34144483 | Msa1286310:CDS |
| ATCTTCTCTTCAATACTCAA+TGG | 0.427669 | 8_3:-34144448 | None:intergenic |
| AATATCTTTGTGTTGAACTA+AGG | 0.430221 | 8_3:-34143864 | None:intergenic |
| AATTATGTGGTTCATTCTAT+GGG | 0.430360 | 8_3:+34142991 | Msa1286310:CDS |
| TAGTGATCCCTCAGAATTTG+TGG | 0.431182 | 8_3:+34145696 | Msa1286310:CDS |
| AAGAAGAAGAAGAAACAATA+GGG | 0.435075 | 8_3:+34143816 | Msa1286310:CDS |
| ATATGAAAATCTTCATAGCT+TGG | 0.439737 | 8_3:-34143277 | None:intergenic |
| AACGAAAAGCTTAAGATCAT+AGG | 0.441241 | 8_3:-34143656 | None:intergenic |
| CCTTATGCAACGGTTCTTTG+AGG | 0.443778 | 8_3:+34145931 | Msa1286310:CDS |
| TTCAGGTCTTCTTCAACTAA+AGG | 0.444369 | 8_3:+34145619 | Msa1286310:intron |
| TAGAGGCTTGACTTGTTTGA+CGG | 0.444445 | 8_3:-34145675 | None:intergenic |
| TGGGGTGAAGAGGATGGAAT+TGG | 0.445515 | 8_3:+34146456 | Msa1286310:intron |
| GTTGGATGAAATGGATTATG+AGG | 0.446923 | 8_3:+34144261 | Msa1286310:CDS |
| TTCAAAATTATGTCAAGAAT+CGG | 0.447066 | 8_3:+34145981 | Msa1286310:CDS |
| CAGTGAAGATCAAATTCAAC+TGG | 0.448901 | 8_3:+34146959 | Msa1286310:CDS |
| TTTCATGTTTCTCAAGAAGA+TGG | 0.452898 | 8_3:+34144010 | Msa1286310:CDS |
| TTGAGAGATTGATCATATAT+GGG | 0.461405 | 8_3:+34142850 | Msa1286310:exon |
| TTCCAAATTTCTTCCATCAA+AGG | 0.464306 | 8_3:-34142781 | None:intergenic |
| TCATTAACAAGCTTCAACAT+TGG | 0.467308 | 8_3:-34145749 | None:intergenic |
| GCTCTCACCTATTGCATGCA+TGG | 0.469292 | 8_3:-34144560 | None:intergenic |
| AACATTGTATGAAGAAGAGT+TGG | 0.470871 | 8_3:+34144243 | Msa1286310:CDS |
| AAGGTTAGAACAAATAATTA+AGG | 0.476290 | 8_3:+34146485 | Msa1286310:CDS |
| ATTGAGTATTGAAGAGAAGA+TGG | 0.483088 | 8_3:+34144450 | Msa1286310:CDS |
| CCTCAAAGAACCGTTGCATA+AGG | 0.488490 | 8_3:-34145931 | None:intergenic |
| TTCTAGCACAAGTAGGATTG+AGG | 0.488666 | 8_3:+34146994 | Msa1286310:CDS |
| TATAGAGAGTGAAGAAAGAG+AGG | 0.492005 | 8_3:+34143297 | Msa1286310:CDS |
| AATCAACAAGATGATGAGAA+AGG | 0.502995 | 8_3:+34143361 | Msa1286310:CDS |
| GTGGGAGAATGATGAGGTAA+TGG | 0.503171 | 8_3:+34144312 | Msa1286310:CDS |
| GATTTGGAAATTGTTTATGT+TGG | 0.507681 | 8_3:+34145782 | Msa1286310:CDS |
| AAACTTCCAAAACACTTGCA+TGG | 0.511519 | 8_3:-34146511 | None:intergenic |
| AAGCATTGGAAATATAAAGA+AGG | 0.512874 | 8_3:+34143961 | Msa1286310:CDS |
| AGGATTGAGGTTGATTTCAA+AGG | 0.514457 | 8_3:+34147007 | Msa1286310:CDS |
| TTGTTGAGCGCGAATACGAA+AGG | 0.514609 | 8_3:+34144215 | Msa1286310:CDS |
| GCTTGTTAATGAATTGCATA+GGG | 0.516958 | 8_3:+34145760 | Msa1286310:CDS |
| CAAGATGATGAGAAAGGAAA+GGG | 0.525313 | 8_3:+34143367 | Msa1286310:CDS |
| TCAATTTGAAGATTATGAGA+TGG | 0.526461 | 8_3:+34143219 | Msa1286310:CDS |
| ACATGTCAAAGAATCATCAT+TGG | 0.527186 | 8_3:-34144077 | None:intergenic |
| TTTGGGCATTGGCTTCTGCA+TGG | 0.537606 | 8_3:+34142956 | Msa1286310:CDS |
| ACCATTTCAGCAAGACCATA+GGG | 0.537698 | 8_3:+34145958 | Msa1286310:CDS |
| GAGCAGTTTCTAGCACAAGT+AGG | 0.547845 | 8_3:+34146987 | Msa1286310:CDS |
| AAACTAAAGCTTAAGACCAT+AGG | 0.553212 | 8_3:-34143905 | None:intergenic |
| TCTCTTGGGAAATCCTATGT+TGG | 0.556438 | 8_3:+34145816 | Msa1286310:CDS |
| AACCATTTCAGCAAGACCAT+AGG | 0.564584 | 8_3:+34145957 | Msa1286310:CDS |
| AGCTTGTTAATGAATTGCAT+AGG | 0.564944 | 8_3:+34145759 | Msa1286310:CDS |
| TTGCGTGGCCACAAATTCTG+AGG | 0.565008 | 8_3:-34145704 | None:intergenic |
| AGGATGGAATTGGTAGTGAA+AGG | 0.568749 | 8_3:+34146466 | Msa1286310:CDS |
| ATTTGAGTGTGAAAGTGTCA+AGG | 0.574044 | 8_3:+34144132 | Msa1286310:CDS |
| ACAAGATGATGAGAAAGGAA+AGG | 0.578719 | 8_3:+34143366 | Msa1286310:CDS |
| GATGGATCAGTTCACAGAAG+AGG | 0.590083 | 8_3:+34143237 | Msa1286310:CDS |
| AACAGAGTACTCTGTTCTGG+TGG | 0.590993 | 8_3:+34143324 | Msa1286310:CDS |
| GGTTTGATTCTACAACAAGT+AGG | 0.598657 | 8_3:+34143837 | Msa1286310:CDS |
| TGTTGACAAGAAGATTCAAG+TGG | 0.599563 | 8_3:+34147100 | Msa1286310:CDS |
| TGTGAGATTTCAGCATAACA+AGG | 0.599893 | 8_3:-34142882 | None:intergenic |
| TGTTGAGCGCGAATACGAAA+GGG | 0.603115 | 8_3:+34144216 | Msa1286310:CDS |
| CTCAAGGAAAGATTAAGAAG+TGG | 0.603788 | 8_3:+34146906 | Msa1286310:CDS |
| TGCGTGGCCACAAATTCTGA+GGG | 0.604567 | 8_3:-34145703 | None:intergenic |
| TGATGAGGATGAATTTGAGT+GGG | 0.611519 | 8_3:+34144294 | Msa1286310:CDS |
| ATAGAGAGTGAAGAAAGAGA+GGG | 0.612047 | 8_3:+34143298 | Msa1286310:CDS |
| GTAGAAGGAGAGAAAACTCA+AGG | 0.618624 | 8_3:+34146890 | Msa1286310:intron |
| AAATTATACCTACGAAGTCG+TGG | 0.625764 | 8_3:-34145878 | None:intergenic |
| GATTCAAATCTTGATCAAGA+TGG | 0.633810 | 8_3:+34143511 | Msa1286310:CDS |
| ATGATGAGGATGAATTTGAG+TGG | 0.634660 | 8_3:+34144293 | Msa1286310:CDS |
| CAAACCTGAATATGTATGTG+AGG | 0.635163 | 8_3:-34143020 | None:intergenic |
| ATGTGATAGAGAAGAAGACT+CGG | 0.638822 | 8_3:+34144186 | Msa1286310:CDS |
| ATGATTCTCCACGACTTCGT+AGG | 0.639610 | 8_3:+34145870 | Msa1286310:CDS |
| TGAGGAAGATGAAGATGATG+AGG | 0.646536 | 8_3:+34144279 | Msa1286310:CDS |
| AAATTCTGAGGGATCACTAG+AGG | 0.650815 | 8_3:-34145692 | None:intergenic |
| ATTATGTGGTTCATTCTATG+GGG | 0.652106 | 8_3:+34142992 | Msa1286310:CDS |
| GAAGCTGACTGTAATCAACA+AGG | 0.693791 | 8_3:-34147143 | None:intergenic |
| ATTTGAGTGGGAGAATGATG+AGG | 0.727491 | 8_3:+34144306 | Msa1286310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATAATGAAAAATAAATAA+TGG | + | chr8_3:34143109-34143128 | Msa1286310:intron | 10.0% |
| !! | TAAATATGAATTATTTAGTT+AGG | - | chr8_3:34145298-34145317 | None:intergenic | 10.0% |
| !! | ATTATAATATTGAAGAAAAT+GGG | - | chr8_3:34145458-34145477 | None:intergenic | 10.0% |
| !! | TATTATAATATTGAAGAAAA+TGG | - | chr8_3:34145459-34145478 | None:intergenic | 10.0% |
| !!! | TTTTGCATTAAAAATAATTT+TGG | - | chr8_3:34145650-34145669 | None:intergenic | 10.0% |
| !!! | ATTTTTCATTATCTTTTTTC+TGG | - | chr8_3:34143103-34143122 | None:intergenic | 15.0% |
| !!! | TTTTTTATTTCAGATATCAA+AGG | + | chr8_3:34143146-34143165 | Msa1286310:intron | 15.0% |
| !!! | TATTTTTTTTCTATCTCTTT+TGG | + | chr8_3:34145013-34145032 | Msa1286310:intron | 15.0% |
| !!! | CATATTTAAAATACAAAGTT+AGG | + | chr8_3:34145310-34145329 | Msa1286310:intron | 15.0% |
| !! | ATTTAATTAGTTAATCACAA+AGG | - | chr8_3:34145581-34145600 | None:intergenic | 15.0% |
| !!! | TGAACAACAATTTAAAATTA+TGG | + | chr8_3:34146226-34146245 | Msa1286310:intron | 15.0% |
| !! | AATAATTTGAAAAGTTAAAG+TGG | - | chr8_3:34146346-34146365 | None:intergenic | 15.0% |
| !! | AAGATAAGAAAAAAATTAAG+TGG | + | chr8_3:34146436-34146455 | Msa1286310:intron | 15.0% |
| !! | AGATAAGAAAAAAATTAAGT+GGG | + | chr8_3:34146437-34146456 | Msa1286310:intron | 15.0% |
| !! | AATAAAAAACCTTATGTAAT+TGG | - | chr8_3:34146647-34146666 | None:intergenic | 15.0% |
| !! | TTCTTACAAACTTAATATTA+TGG | - | chr8_3:34146783-34146802 | None:intergenic | 15.0% |
| !! | AAAAAATGAATAATTTCGTA+GGG | - | chr8_3:34146852-34146871 | None:intergenic | 15.0% |
| !! | AAAAAAATGAATAATTTCGT+AGG | - | chr8_3:34146853-34146872 | None:intergenic | 15.0% |
| !!! | CTTTCTTTTTTATAAAGAGA+AGG | - | chr8_3:34142821-34142840 | None:intergenic | 20.0% |
| !!! | TTCTGGCTAATATTATTTAT+TGG | - | chr8_3:34143086-34143105 | None:intergenic | 20.0% |
| !! | AATAGTGAAAAAGAAACAAA+AGG | + | chr8_3:34143406-34143425 | Msa1286310:CDS | 20.0% |
| !! | ATAGTGAAAAAGAAACAAAA+GGG | + | chr8_3:34143407-34143426 | Msa1286310:CDS | 20.0% |
| !!! | TTCTAGCATTGAAAATATAA+AGG | + | chr8_3:34143697-34143716 | Msa1286310:CDS | 20.0% |
| !!! | TCTAGCATTGAAAATATAAA+GGG | + | chr8_3:34143698-34143717 | Msa1286310:CDS | 20.0% |
| !! | TATCATAAGAAACATTTCTT+AGG | - | chr8_3:34143931-34143950 | None:intergenic | 20.0% |
| !! | AGAAATGTTTCTTATGATAA+TGG | + | chr8_3:34143932-34143951 | Msa1286310:CDS | 20.0% |
| !! | AAATATAAAGAAGGAACTAT+TGG | + | chr8_3:34143970-34143989 | Msa1286310:CDS | 20.0% |
| !! | GAAAAAGAAGTCAAATAATT+TGG | - | chr8_3:34144585-34144604 | None:intergenic | 20.0% |
| !! | AATAATATGCTTATGAAACA+CGG | - | chr8_3:34144846-34144865 | None:intergenic | 20.0% |
| !! | GTGATTAGAAAGAATATAAA+GGG | - | chr8_3:34145112-34145131 | None:intergenic | 20.0% |
| !! | TGTGATTAGAAAGAATATAA+AGG | - | chr8_3:34145113-34145132 | None:intergenic | 20.0% |
| !! | TGAATGGAAAATAAAAAGAA+TGG | - | chr8_3:34145198-34145217 | None:intergenic | 20.0% |
| !!! | GCATTAAAAATAATTTTGGA+GGG | - | chr8_3:34145646-34145665 | None:intergenic | 20.0% |
| !!! | TGCATTAAAAATAATTTTGG+AGG | - | chr8_3:34145647-34145666 | None:intergenic | 20.0% |
| !! | TTCAAAATTATGTCAAGAAT+CGG | + | chr8_3:34145981-34146000 | Msa1286310:CDS | 20.0% |
| !! | GATAAGAAAAAAATTAAGTG+GGG | + | chr8_3:34146438-34146457 | Msa1286310:intron | 20.0% |
| !! | AAGGTTAGAACAAATAATTA+AGG | + | chr8_3:34146485-34146504 | Msa1286310:CDS | 20.0% |
| !! | TATTCAAATCCAATTACATA+AGG | + | chr8_3:34146635-34146654 | Msa1286310:intron | 20.0% |
| !!! | TAAAAACTCGTAATTTTGTA+TGG | - | chr8_3:34146720-34146739 | None:intergenic | 20.0% |
| !!! | TATAGATACATTTTTTTGAG+AGG | + | chr8_3:34147174-34147193 | Msa1286310:three_prime_UTR | 20.0% |
| ! | TTGAGAGATTGATCATATAT+GGG | + | chr8_3:34142850-34142869 | Msa1286310:exon | 25.0% |
| !! | TTTTCATAGACAAAATCACT+AGG | - | chr8_3:34142931-34142950 | None:intergenic | 25.0% |
| ! | TTGTCTATGAAAACTTGATT+TGG | + | chr8_3:34142938-34142957 | Msa1286310:CDS | 25.0% |
| ! | TGTCTATGAAAACTTGATTT+GGG | + | chr8_3:34142939-34142958 | Msa1286310:CDS | 25.0% |
| !! | GATTTTCTTATGCAATTATG+TGG | + | chr8_3:34142978-34142997 | Msa1286310:CDS | 25.0% |
| ! | AATTATGTGGTTCATTCTAT+GGG | + | chr8_3:34142991-34143010 | Msa1286310:CDS | 25.0% |
| !! | TTTTGTTCAACTAAATCATG+TGG | - | chr8_3:34143190-34143209 | None:intergenic | 25.0% |
| ! | TCAATTTGAAGATTATGAGA+TGG | + | chr8_3:34143219-34143238 | Msa1286310:CDS | 25.0% |
| ! | ATATGAAAATCTTCATAGCT+TGG | - | chr8_3:34143280-34143299 | None:intergenic | 25.0% |
| !! | AAATCACAAGTATCTTTTTC+TGG | - | chr8_3:34143626-34143645 | None:intergenic | 25.0% |
| ! | AGAAAAAGATACTTGTGATT+TGG | + | chr8_3:34143625-34143644 | Msa1286310:intron | 25.0% |
| ! | TGAAAATATAAAGGGTTCTT+TGG | + | chr8_3:34143706-34143725 | Msa1286310:CDS | 25.0% |
| ! | AAGAAGAAGAAGAAACAATA+GGG | + | chr8_3:34143816-34143835 | Msa1286310:CDS | 25.0% |
| ! | AATATCTTTGTGTTGAACTA+AGG | - | chr8_3:34143867-34143886 | None:intergenic | 25.0% |
| ! | TTAGTTCAACACAAAGATAT+TGG | + | chr8_3:34143866-34143885 | Msa1286310:CDS | 25.0% |
| !!! | AAGCATTGGAAATATAAAGA+AGG | + | chr8_3:34143961-34143980 | Msa1286310:CDS | 25.0% |
| ! | TCTTTGACATGTAAGATTAT+AGG | + | chr8_3:34144088-34144107 | Msa1286310:CDS | 25.0% |
| ! | TACTTGTATTGAGTTCATAT+TGG | + | chr8_3:34144615-34144634 | Msa1286310:intron | 25.0% |
| ! | TATTGAGTTCATATTGGATT+TGG | + | chr8_3:34144621-34144640 | Msa1286310:intron | 25.0% |
| ! | TTTGGATAATTTCAATGATC+TGG | + | chr8_3:34144639-34144658 | Msa1286310:intron | 25.0% |
| ! | ACACATGTTTATTTACAGTT+AGG | + | chr8_3:34145041-34145060 | Msa1286310:intron | 25.0% |
| !! | ATAGTGGAATTGAAAAGTTA+TGG | - | chr8_3:34145162-34145181 | None:intergenic | 25.0% |
| ! | TGGAAAATATTGTCAAATAG+TGG | - | chr8_3:34145178-34145197 | None:intergenic | 25.0% |
| !!! | CATTTCTTGTTTTTTACGTA+AGG | + | chr8_3:34145507-34145526 | Msa1286310:intron | 25.0% |
| ! | GATTTGGAAATTGTTTATGT+TGG | + | chr8_3:34145782-34145801 | Msa1286310:CDS | 25.0% |
| !! | TTTGTTTCACCTTTTATGAT+TGG | - | chr8_3:34146034-34146053 | None:intergenic | 25.0% |
| ! | TTGTTACAACATCTAACTTA+GGG | - | chr8_3:34146099-34146118 | None:intergenic | 25.0% |
| ! | TTTGTTTGAACGCAATATAA+AGG | - | chr8_3:34146165-34146184 | None:intergenic | 25.0% |
| ! | GTAATATTCACGATTTAATG+AGG | - | chr8_3:34146189-34146208 | None:intergenic | 25.0% |
| ! | AATTATGGTAACAACAACAT+AGG | + | chr8_3:34146241-34146260 | Msa1286310:intron | 25.0% |
| ! | TATTATCTATGTCTATTCGT+CGG | + | chr8_3:34146362-34146381 | Msa1286310:intron | 25.0% |
| !! | TGTGATGATGAAATACTTTA+TGG | - | chr8_3:34146569-34146588 | None:intergenic | 25.0% |
| !! | AAAAAAGTGTAAGTAGACAA+AGG | - | chr8_3:34146676-34146695 | None:intergenic | 25.0% |
| !!! | TCTACTTACACTTTTTTCAT+AGG | + | chr8_3:34146679-34146698 | Msa1286310:intron | 25.0% |
| ! | GAGACGAAAAATTCAAAATA+AGG | - | chr8_3:34146810-34146829 | None:intergenic | 25.0% |
| !!! | TTGGTTTTAAATGTTGTAGA+AGG | + | chr8_3:34146875-34146894 | Msa1286310:intron | 25.0% |
| ! | TGAGAAAAGATCATCTAATA+TGG | + | chr8_3:34147048-34147067 | Msa1286310:CDS | 25.0% |
| ! | TCTTGTCAACAAAATTGATT+TGG | - | chr8_3:34147091-34147110 | None:intergenic | 25.0% |
| AACCTTTGATGGAAGAAATT+TGG | + | chr8_3:34142779-34142798 | Msa1286310:five_prime_UTR | 30.0% | |
| TTCCAAATTTCTTCCATCAA+AGG | - | chr8_3:34142784-34142803 | None:intergenic | 30.0% | |
| CTTGAGAGATTGATCATATA+TGG | + | chr8_3:34142849-34142868 | Msa1286310:exon | 30.0% | |
| ! | TTTCAGCATAACAAGGTTTT+TGG | - | chr8_3:34142878-34142897 | None:intergenic | 30.0% |
| CAATTATGTGGTTCATTCTA+TGG | + | chr8_3:34142990-34143009 | Msa1286310:CDS | 30.0% | |
| ATTATGTGGTTCATTCTATG+GGG | + | chr8_3:34142992-34143011 | Msa1286310:CDS | 30.0% | |
| AATCAACAAGATGATGAGAA+AGG | + | chr8_3:34143361-34143380 | Msa1286310:CDS | 30.0% | |
| !!! | AGAGTGCTCTGTTTTTATAA+AGG | + | chr8_3:34143486-34143505 | Msa1286310:CDS | 30.0% |
| !!! | GAGTGCTCTGTTTTTATAAA+GGG | + | chr8_3:34143487-34143506 | Msa1286310:CDS | 30.0% |
| GATTCAAATCTTGATCAAGA+TGG | + | chr8_3:34143511-34143530 | Msa1286310:CDS | 30.0% | |
| AACGAAAAGCTTAAGATCAT+AGG | - | chr8_3:34143659-34143678 | None:intergenic | 30.0% | |
| ! | TAGAAAGTGCATCATTTCTT+AGG | - | chr8_3:34143682-34143701 | None:intergenic | 30.0% |
| GAAGAAGAAGAAGAAACAAT+AGG | + | chr8_3:34143815-34143834 | Msa1286310:CDS | 30.0% | |
| !! | TGTTTTTGATGAAGAACCTA+TGG | + | chr8_3:34143889-34143908 | Msa1286310:CDS | 30.0% |
| AAACTAAAGCTTAAGACCAT+AGG | - | chr8_3:34143908-34143927 | None:intergenic | 30.0% | |
| !!! | GATAATGGATTTTCAAGCAT+TGG | + | chr8_3:34143947-34143966 | Msa1286310:CDS | 30.0% |
| ACTATTGGAGCATAATTTAG+AGG | + | chr8_3:34143985-34144004 | Msa1286310:CDS | 30.0% | |
| TTTCATGTTTCTCAAGAAGA+TGG | + | chr8_3:34144010-34144029 | Msa1286310:CDS | 30.0% | |
| ACATGTCAAAGAATCATCAT+TGG | - | chr8_3:34144080-34144099 | None:intergenic | 30.0% | |
| CAAGGAAGTTCAAGAATTAA+AGG | + | chr8_3:34144150-34144169 | Msa1286310:CDS | 30.0% | |
| AACATTGTATGAAGAAGAGT+TGG | + | chr8_3:34144243-34144262 | Msa1286310:CDS | 30.0% | |
| !! | GGTAATGGAACAAATCAAAT+TGG | + | chr8_3:34144327-34144346 | Msa1286310:CDS | 30.0% |
| GAATTGAAAAATGCAAGACA+AGG | + | chr8_3:34144349-34144368 | Msa1286310:CDS | 30.0% | |
| ATCTTCTCTTCAATACTCAA+TGG | - | chr8_3:34144451-34144470 | None:intergenic | 30.0% | |
| !! | ATTGAGTATTGAAGAGAAGA+TGG | + | chr8_3:34144450-34144469 | Msa1286310:CDS | 30.0% |
| ! | CCTTTTGAATTTCAACAATG+TGG | - | chr8_3:34144486-34144505 | None:intergenic | 30.0% |
| CCACATTGTTGAAATTCAAA+AGG | + | chr8_3:34144483-34144502 | Msa1286310:CDS | 30.0% | |
| !! | AATGATCTGGTCATTTTACA+TGG | + | chr8_3:34144652-34144671 | Msa1286310:intron | 30.0% |
| TATTTGAATTAGGTCTGTTC+CGG | + | chr8_3:34144686-34144705 | Msa1286310:intron | 30.0% | |
| TCTCAAATTATTAGCAACGT+TGG | + | chr8_3:34144779-34144798 | Msa1286310:intron | 30.0% | |
| CATTAACAAGCTTCAACATT+GGG | - | chr8_3:34145751-34145770 | None:intergenic | 30.0% | |
| TCATTAACAAGCTTCAACAT+TGG | - | chr8_3:34145752-34145771 | None:intergenic | 30.0% | |
| !! | AGCTTGTTAATGAATTGCAT+AGG | + | chr8_3:34145759-34145778 | Msa1286310:CDS | 30.0% |
| ! | GCTTGTTAATGAATTGCATA+GGG | + | chr8_3:34145760-34145779 | Msa1286310:CDS | 30.0% |
| TAATGAATTGCATAGGGATT+TGG | + | chr8_3:34145766-34145785 | Msa1286310:CDS | 30.0% | |
| !!! | TTTTTCAAGTCCTTATGCAA+CGG | + | chr8_3:34145921-34145940 | Msa1286310:CDS | 30.0% |
| ! | TGACATAATTTTGAACCCTA+TGG | - | chr8_3:34145976-34145995 | None:intergenic | 30.0% |
| ! | CTTCAAGTTCCAATCATAAA+AGG | + | chr8_3:34146022-34146041 | Msa1286310:CDS | 30.0% |
| GTTGTTACAACATCTAACTT+AGG | - | chr8_3:34146100-34146119 | None:intergenic | 30.0% | |
| CAGAAATTTCAGAACTTCTA+CGG | + | chr8_3:34146610-34146629 | Msa1286310:intron | 30.0% | |
| AGAAATTTCAGAACTTCTAC+GGG | + | chr8_3:34146611-34146630 | Msa1286310:intron | 30.0% | |
| ! | TTTGATCTTCACTGTGTTTT+TGG | - | chr8_3:34146953-34146972 | None:intergenic | 30.0% |
| TGTGAGATTTCAGCATAACA+AGG | - | chr8_3:34142885-34142904 | None:intergenic | 35.0% | |
| !! | TGAAAACTTGATTTGGGCAT+TGG | + | chr8_3:34142945-34142964 | Msa1286310:CDS | 35.0% |
| TGATCCTCACATACATATTC+AGG | + | chr8_3:34143016-34143035 | Msa1286310:CDS | 35.0% | |
| CAAACCTGAATATGTATGTG+AGG | - | chr8_3:34143023-34143042 | None:intergenic | 35.0% | |
| TATAGAGAGTGAAGAAAGAG+AGG | + | chr8_3:34143297-34143316 | Msa1286310:CDS | 35.0% | |
| ATAGAGAGTGAAGAAAGAGA+GGG | + | chr8_3:34143298-34143317 | Msa1286310:CDS | 35.0% | |
| ACAAGATGATGAGAAAGGAA+AGG | + | chr8_3:34143366-34143385 | Msa1286310:CDS | 35.0% | |
| CAAGATGATGAGAAAGGAAA+GGG | + | chr8_3:34143367-34143386 | Msa1286310:CDS | 35.0% | |
| AAAGGAAAGGGTGAAAAAGA+TGG | + | chr8_3:34143379-34143398 | Msa1286310:CDS | 35.0% | |
| !! | AGAGTGCTCTGTTTTGTTAA+AGG | + | chr8_3:34143745-34143764 | Msa1286310:CDS | 35.0% |
| !! | GAGTGCTCTGTTTTGTTAAA+GGG | + | chr8_3:34143746-34143765 | Msa1286310:CDS | 35.0% |
| ! | GATTCCGATTTTCATCTTGA+TGG | + | chr8_3:34143770-34143789 | Msa1286310:CDS | 35.0% |
| TCCACCATCAAGATGAAAAT+CGG | - | chr8_3:34143777-34143796 | None:intergenic | 35.0% | |
| GGTTTGATTCTACAACAAGT+AGG | + | chr8_3:34143837-34143856 | Msa1286310:CDS | 35.0% | |
| !! | ATTTGAGTGTGAAAGTGTCA+AGG | + | chr8_3:34144132-34144151 | Msa1286310:CDS | 35.0% |
| ATGTGATAGAGAAGAAGACT+CGG | + | chr8_3:34144186-34144205 | Msa1286310:CDS | 35.0% | |
| TGAAGAAGAGTTGGATGAAA+TGG | + | chr8_3:34144252-34144271 | Msa1286310:CDS | 35.0% | |
| !! | GTTGGATGAAATGGATTATG+AGG | + | chr8_3:34144261-34144280 | Msa1286310:CDS | 35.0% |
| ATGATGAGGATGAATTTGAG+TGG | + | chr8_3:34144293-34144312 | Msa1286310:CDS | 35.0% | |
| TGATGAGGATGAATTTGAGT+GGG | + | chr8_3:34144294-34144313 | Msa1286310:CDS | 35.0% | |
| TTGAAAAATGCAAGACAAGG+AGG | + | chr8_3:34144352-34144371 | Msa1286310:CDS | 35.0% | |
| !! | ACTTGCAACAATTTTGGAAG+AGG | + | chr8_3:34144375-34144394 | Msa1286310:CDS | 35.0% |
| ! | ACTCGATGTCTTGAATTTTC+AGG | + | chr8_3:34144537-34144556 | Msa1286310:CDS | 35.0% |
| !! | TGGTCATTTTACATGGAACA+CGG | + | chr8_3:34144659-34144678 | Msa1286310:intron | 35.0% |
| ACACGGACACTATTTGAATT+AGG | + | chr8_3:34144676-34144695 | Msa1286310:intron | 35.0% | |
| GTCAAATGCATATATGCACA+AGG | - | chr8_3:34145228-34145247 | None:intergenic | 35.0% | |
| ! | TTTTGATCAGCCACTAAAGA+TGG | - | chr8_3:34145260-34145279 | None:intergenic | 35.0% |
| TGTTTGTTTGTGTGAATGCA+CGG | + | chr8_3:34145384-34145403 | Msa1286310:intron | 35.0% | |
| AAAGTTGCATTTCAGCTTTG+AGG | + | chr8_3:34145540-34145559 | Msa1286310:intron | 35.0% | |
| TTGAAGAAGACCTGAATCAA+GGG | - | chr8_3:34145615-34145634 | None:intergenic | 35.0% | |
| TTCAGGTCTTCTTCAACTAA+AGG | + | chr8_3:34145619-34145638 | Msa1286310:intron | 35.0% | |
| TTTCCCAAGAGAGACAAATT+TGG | - | chr8_3:34145808-34145827 | None:intergenic | 35.0% | |
| AAATTATACCTACGAAGTCG+TGG | - | chr8_3:34145881-34145900 | None:intergenic | 35.0% | |
| CGTAGGTATAATTTAGTTGC+TGG | + | chr8_3:34145887-34145906 | Msa1286310:CDS | 35.0% | |
| ATACTTGTGTTAGTGTCTCA+CGG | + | chr8_3:34146298-34146317 | Msa1286310:intron | 35.0% | |
| AAAAATTAAGTGGGGTGAAG+AGG | + | chr8_3:34146446-34146465 | Msa1286310:intron | 35.0% | |
| AAACTTCCAAAACACTTGCA+TGG | - | chr8_3:34146514-34146533 | None:intergenic | 35.0% | |
| TCATCATCACAAAGAGAATG+AGG | + | chr8_3:34146578-34146597 | Msa1286310:intron | 35.0% | |
| CTCAAGGAAAGATTAAGAAG+TGG | + | chr8_3:34146906-34146925 | Msa1286310:CDS | 35.0% | |
| GAAGTGGAAATTGCATAGTA+AGG | + | chr8_3:34146922-34146941 | Msa1286310:CDS | 35.0% | |
| CAGTGAAGATCAAATTCAAC+TGG | + | chr8_3:34146959-34146978 | Msa1286310:CDS | 35.0% | |
| ! | AGGATTGAGGTTGATTTCAA+AGG | + | chr8_3:34147007-34147026 | Msa1286310:CDS | 35.0% |
| TGTTGACAAGAAGATTCAAG+TGG | + | chr8_3:34147100-34147119 | Msa1286310:CDS | 35.0% | |
| ! | AGAAACAGAGTACTCTGTTC+TGG | + | chr8_3:34143321-34143340 | Msa1286310:CDS | 40.0% |
| ! | TCCGATTTTCATCTTGATGG+TGG | + | chr8_3:34143773-34143792 | Msa1286310:CDS | 40.0% |
| TGAGGAAGATGAAGATGATG+AGG | + | chr8_3:34144279-34144298 | Msa1286310:CDS | 40.0% | |
| ATTTGAGTGGGAGAATGATG+AGG | + | chr8_3:34144306-34144325 | Msa1286310:CDS | 40.0% | |
| ! | AGGAGGACTTGCAACAATTT+TGG | + | chr8_3:34144369-34144388 | Msa1286310:CDS | 40.0% |
| ! | TACATGTGTCGATGTTGTGT+CGG | - | chr8_3:34144737-34144756 | None:intergenic | 40.0% |
| TACGAATACTGATCACGACA+CGG | - | chr8_3:34144816-34144835 | None:intergenic | 40.0% | |
| AATCACAAAGCCACTGATAG+AGG | + | chr8_3:34145126-34145145 | Msa1286310:intron | 40.0% | |
| ! | TGCACAAGGTTGACTTTGAA+TGG | - | chr8_3:34145214-34145233 | None:intergenic | 40.0% |
| ! | ACCTGTTTTACCCTTGATTC+AGG | + | chr8_3:34145602-34145621 | Msa1286310:intron | 40.0% |
| ACCTGAATCAAGGGTAAAAC+AGG | - | chr8_3:34145606-34145625 | None:intergenic | 40.0% | |
| GTTGAAGAAGACCTGAATCA+AGG | - | chr8_3:34145616-34145635 | None:intergenic | 40.0% | |
| !! | TAGAGGCTTGACTTGTTTGA+CGG | - | chr8_3:34145678-34145697 | None:intergenic | 40.0% |
| ! | AAATTCTGAGGGATCACTAG+AGG | - | chr8_3:34145695-34145714 | None:intergenic | 40.0% |
| TAGTGATCCCTCAGAATTTG+TGG | + | chr8_3:34145696-34145715 | Msa1286310:CDS | 40.0% | |
| ! | TTGTTCTTTTGAGCTTTGCG+TGG | - | chr8_3:34145722-34145741 | None:intergenic | 40.0% |
| TTGGCCAAATTTGTCTCTCT+TGG | + | chr8_3:34145801-34145820 | Msa1286310:CDS | 40.0% | |
| TGGCCAAATTTGTCTCTCTT+GGG | + | chr8_3:34145802-34145821 | Msa1286310:CDS | 40.0% | |
| TCTCTTGGGAAATCCTATGT+TGG | + | chr8_3:34145816-34145835 | Msa1286310:CDS | 40.0% | |
| ! | TTTTCTCATGCTGCCAACAT+AGG | - | chr8_3:34145832-34145851 | None:intergenic | 40.0% |
| AACCATTTCAGCAAGACCAT+AGG | + | chr8_3:34145957-34145976 | Msa1286310:CDS | 40.0% | |
| ACCATTTCAGCAAGACCATA+GGG | + | chr8_3:34145958-34145977 | Msa1286310:CDS | 40.0% | |
| TAAACTTTCCGACGCAATTG+TGG | + | chr8_3:34146127-34146146 | Msa1286310:intron | 40.0% | |
| GAATATTACAGCTGCCATTG+CGG | + | chr8_3:34146200-34146219 | Msa1286310:intron | 40.0% | |
| ! | ATTGTTGTTCACAACCGCAA+TGG | - | chr8_3:34146217-34146236 | None:intergenic | 40.0% |
| !! | AGGATGGAATTGGTAGTGAA+AGG | + | chr8_3:34146466-34146485 | Msa1286310:CDS | 40.0% |
| ! | AGGAATCCATGCAAGTGTTT+TGG | + | chr8_3:34146505-34146524 | Msa1286310:CDS | 40.0% |
| TCACAAAGAGAATGAGGTCA+AGG | + | chr8_3:34146584-34146603 | Msa1286310:intron | 40.0% | |
| GTAGAAGGAGAGAAAACTCA+AGG | + | chr8_3:34146890-34146909 | Msa1286310:intron | 40.0% | |
| TTCTAGCACAAGTAGGATTG+AGG | + | chr8_3:34146994-34147013 | Msa1286310:CDS | 40.0% | |
| GAAGCTGACTGTAATCAACA+AGG | - | chr8_3:34147146-34147165 | None:intergenic | 40.0% | |
| GATGGATCAGTTCACAGAAG+AGG | + | chr8_3:34143237-34143256 | Msa1286310:CDS | 45.0% | |
| ! | AACAGAGTACTCTGTTCTGG+TGG | + | chr8_3:34143324-34143343 | Msa1286310:CDS | 45.0% |
| TTGTTGAGCGCGAATACGAA+AGG | + | chr8_3:34144215-34144234 | Msa1286310:CDS | 45.0% | |
| TGTTGAGCGCGAATACGAAA+GGG | + | chr8_3:34144216-34144235 | Msa1286310:CDS | 45.0% | |
| GTGGGAGAATGATGAGGTAA+TGG | + | chr8_3:34144312-34144331 | Msa1286310:CDS | 45.0% | |
| TTTCAGGCCATGCATGCAAT+AGG | + | chr8_3:34144553-34144572 | Msa1286310:CDS | 45.0% | |
| TGTAGACTTGCCTCTATCAG+TGG | - | chr8_3:34145139-34145158 | None:intergenic | 45.0% | |
| ATGATTCTCCACGACTTCGT+AGG | + | chr8_3:34145870-34145889 | Msa1286310:CDS | 45.0% | |
| CCTCAAAGAACCGTTGCATA+AGG | - | chr8_3:34145934-34145953 | None:intergenic | 45.0% | |
| CCTTATGCAACGGTTCTTTG+AGG | + | chr8_3:34145931-34145950 | Msa1286310:CDS | 45.0% | |
| ! | ACCCTATGGTCTTGCTGAAA+TGG | - | chr8_3:34145962-34145981 | None:intergenic | 45.0% |
| ! | GCGTCGGAAAGTTTAAAACG+AGG | - | chr8_3:34146122-34146141 | None:intergenic | 45.0% |
| CAATGCAACCACAATTGCGT+CGG | - | chr8_3:34146138-34146157 | None:intergenic | 45.0% | |
| ATTAAGTGGGGTGAAGAGGA+TGG | + | chr8_3:34146450-34146469 | Msa1286310:intron | 45.0% | |
| TAGGGACTAAACTTGACGAC+TGG | - | chr8_3:34146834-34146853 | None:intergenic | 45.0% | |
| !! | GAGCAGTTTCTAGCACAAGT+AGG | + | chr8_3:34146987-34147006 | Msa1286310:CDS | 45.0% |
| !! | GAAATAAAAAATAAAAAATA+AGG | - | chr8_3:34143137-34143156 | None:intergenic | 5.0% |
| !!! | TTATATTTTATATGTAAATT+TGG | - | chr8_3:34145413-34145432 | None:intergenic | 5.0% |
| !!! | AAATTATTCATTTTTTTATT+TGG | + | chr8_3:34146856-34146875 | Msa1286310:intron | 5.0% |
| !! | TTTGGGCATTGGCTTCTGCA+TGG | + | chr8_3:34142956-34142975 | Msa1286310:CDS | 50.0% |
| GCTCTCACCTATTGCATGCA+TGG | - | chr8_3:34144563-34144582 | None:intergenic | 50.0% | |
| ACGCGACATATGTCTGACAC+CGG | - | chr8_3:34144708-34144727 | None:intergenic | 50.0% | |
| CGAAGTCGCACCATCTTTAG+TGG | + | chr8_3:34145247-34145266 | Msa1286310:intron | 50.0% | |
| TGCGTGGCCACAAATTCTGA+GGG | - | chr8_3:34145706-34145725 | None:intergenic | 50.0% | |
| TTGCGTGGCCACAAATTCTG+AGG | - | chr8_3:34145707-34145726 | None:intergenic | 50.0% | |
| TGGGGTGAAGAGGATGGAAT+TGG | + | chr8_3:34146456-34146475 | Msa1286310:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 34142775 | 34147206 | 34142775 | ID=Msa1286310;Name=Msa1286310 |
| chr8_3 | mRNA | 34142775 | 34147206 | 34142775 | ID=Msa1286310-mRNA-1;Parent=Msa1286310;Name=Msa1286310-mRNA-1;_AED=0.05;_eAED=0.05;_QI=93|0.4|0.5|1|0.6|0.83|6|55|758 |
| chr8_3 | exon | 34142775 | 34143037 | 34142775 | ID=Msa1286310-mRNA-1:exon:10197;Parent=Msa1286310-mRNA-1 |
| chr8_3 | exon | 34143159 | 34143532 | 34143159 | ID=Msa1286310-mRNA-1:exon:10198;Parent=Msa1286310-mRNA-1 |
| chr8_3 | exon | 34143627 | 34144574 | 34143627 | ID=Msa1286310-mRNA-1:exon:10199;Parent=Msa1286310-mRNA-1 |
| chr8_3 | exon | 34145624 | 34146043 | 34145624 | ID=Msa1286310-mRNA-1:exon:10200;Parent=Msa1286310-mRNA-1 |
| chr8_3 | exon | 34146466 | 34146572 | 34146466 | ID=Msa1286310-mRNA-1:exon:10201;Parent=Msa1286310-mRNA-1 |
| chr8_3 | exon | 34146894 | 34147206 | 34146894 | ID=Msa1286310-mRNA-1:exon:10202;Parent=Msa1286310-mRNA-1 |
| chr8_3 | five_prime_UTR | 34142775 | 34142867 | 34142775 | ID=Msa1286310-mRNA-1:five_prime_utr;Parent=Msa1286310-mRNA-1 |
| chr8_3 | CDS | 34142868 | 34143037 | 34142868 | ID=Msa1286310-mRNA-1:cds;Parent=Msa1286310-mRNA-1 |
| chr8_3 | CDS | 34143159 | 34143532 | 34143159 | ID=Msa1286310-mRNA-1:cds;Parent=Msa1286310-mRNA-1 |
| chr8_3 | CDS | 34143627 | 34144574 | 34143627 | ID=Msa1286310-mRNA-1:cds;Parent=Msa1286310-mRNA-1 |
| chr8_3 | CDS | 34145624 | 34146043 | 34145624 | ID=Msa1286310-mRNA-1:cds;Parent=Msa1286310-mRNA-1 |
| chr8_3 | CDS | 34146466 | 34146572 | 34146466 | ID=Msa1286310-mRNA-1:cds;Parent=Msa1286310-mRNA-1 |
| chr8_3 | CDS | 34146894 | 34147151 | 34146894 | ID=Msa1286310-mRNA-1:cds;Parent=Msa1286310-mRNA-1 |
| chr8_3 | three_prime_UTR | 34147152 | 34147206 | 34147152 | ID=Msa1286310-mRNA-1:three_prime_utr;Parent=Msa1286310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
