AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1287550


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1287550 MtrunA17_Chr2g0305311 94.231 312 18 0 115 426 174 485 0.0 613
Msa1287550 MtrunA17_Chr2g0305311 91.262 103 9 0 16 118 1 103 1.06e-42 156
Msa1287550 MtrunA17_Chr6g0467141 69.930 143 39 3 283 422 1 142 6.73e-61 194
Msa1287550 MtrunA17_Chr2g0309021 32.239 335 190 8 114 416 195 524 9.62e-44 160
Msa1287550 MtrunA17_Chr3g0086061 96.429 56 2 0 362 417 1 56 5.90e-30 110
Msa1287550 MtrunA17_Chr4g0011741 25.826 333 205 11 124 426 594 914 2.75e-15 78.2
Msa1287550 MtrunA17_Chr8g0380341 25.899 278 165 10 112 376 484 733 3.97e-14 74.7
Msa1287550 MtrunA17_Chr6g0472201 24.453 274 183 7 123 385 79 339 3.96e-13 70.9
Msa1287550 MtrunA17_Chr1g0180021 40.541 74 44 0 229 302 3 76 3.14e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1287550 AT1G40087.1 28.571 280 181 5 123 392 75 345 9.83e-31 122
Msa1287550 AT3G30200.1 26.117 291 195 5 105 385 184 464 1.09e-24 106

Find 99 sgRNAs with CRISPR-Local

Find 585 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGAAATTCACTAGTATTT+TGG 0.170213 8_3:-38730395 Msa1287550:three_prime_UTR
TGTTCACGGAACATTATAAA+TGG 0.211274 8_3:-38732291 Msa1287550:CDS
TGGATCAACATTCATACTTT+TGG 0.229762 8_3:-38730264 Msa1287550:three_prime_UTR
TCCTGGATATGTTCGTTCTA+TGG 0.238946 8_3:-38731409 Msa1287550:CDS
TTCGCAAGATTCACTTCTAA+TGG 0.285655 8_3:+38732262 None:intergenic
GAAGCATTTGTCAAAGTGTT+TGG 0.294876 8_3:-38731441 Msa1287550:CDS
ATCCTTAAGTGAATCGATTT+CGG 0.299734 8_3:+38731293 None:intergenic
CTTGGTGATTCTGTGTTTGT+TGG 0.312619 8_3:+38730536 None:intergenic
TCCGATAATGTTTGAAAGTT+GGG 0.341280 8_3:-38732530 Msa1287550:CDS
GTCACTGGTGTAGGTGGTGG+AGG 0.341334 8_3:+38738649 None:intergenic
AATCAAGTTCATTCAATGTA+TGG 0.341359 8_3:-38730337 Msa1287550:three_prime_UTR
ACAAAATTTGTTGTTGATGA+TGG 0.348960 8_3:-38732376 Msa1287550:CDS
TCCCAACTTTCAAACATTAT+CGG 0.351303 8_3:+38732529 None:intergenic
TTGACAAATGCTTCATTCTC+AGG 0.360349 8_3:+38731450 None:intergenic
AATCGATTCACTTAAGGATA+AGG 0.373751 8_3:-38731289 Msa1287550:CDS
TTCATTGACATATAGCCCTT+TGG 0.392237 8_3:+38731942 None:intergenic
TCACTGGTGTAGGTGGTGGA+GGG 0.393360 8_3:+38738650 None:intergenic
TTGTACCGCGCATATTCATA+TGG 0.399968 8_3:+38739396 None:intergenic
TTCCGATAATGTTTGAAAGT+TGG 0.402381 8_3:-38732531 Msa1287550:CDS
ACAAGGGATTGGGCGAGAAT+TGG 0.404355 8_3:+38739330 None:intergenic
AGACGATTCGACAAGGGATT+GGG 0.404895 8_3:+38739320 None:intergenic
TTTGCTGCCTCAAGAGCTCC+AGG 0.415207 8_3:+38738709 None:intergenic
TCGCAAGATTCACTTCTAAT+GGG 0.416434 8_3:+38732263 None:intergenic
TGACAAGTATTGGAAGGAAA+TGG 0.418994 8_3:-38732333 Msa1287550:CDS
GTTGTCACCTTGCTAGTTAG+TGG 0.426365 8_3:+38738595 None:intergenic
TATGTTCGTTCTATGGGACT+TGG 0.427083 8_3:-38731402 Msa1287550:CDS
AGCCGAAATCGATTCACTTA+AGG 0.432995 8_3:-38731295 Msa1287550:CDS
GGTGCAGGTGGTGGTGTCAC+TGG 0.436905 8_3:+38738634 None:intergenic
GGTGGTGGTGTCACTGGTGT+AGG 0.438810 8_3:+38738640 None:intergenic
ACTTTCTTCCTAGTGTATGA+TGG 0.441751 8_3:+38732125 None:intergenic
AAGACGATTCGACAAGGGAT+TGG 0.445301 8_3:+38739319 None:intergenic
AAGATGGTCGAGAATATAGT+AGG 0.447559 8_3:-38731996 Msa1287550:CDS
TCTTGGACTGGTGCAGGTGG+TGG 0.448182 8_3:+38738625 None:intergenic
GGTGTCACTGGTGTAGGTGG+TGG 0.450560 8_3:+38738646 None:intergenic
GTAGGTGGTGGAGGGGCTTG+TGG 0.450631 8_3:+38738658 None:intergenic
AGATGGTCGAGAATATAGTA+GGG 0.452001 8_3:-38731995 Msa1287550:CDS
TCAGTCACCTCGACTATTGC+CGG 0.456206 8_3:+38738568 None:intergenic
TCAATAAATCATACCGATGA+AGG 0.461128 8_3:+38739282 None:intergenic
GAAGCCAGACACGCAAAAGA+AGG 0.463489 8_3:-38732185 Msa1287550:CDS
GAATCATGAGCAACATCACT+AGG 0.467684 8_3:-38730474 Msa1287550:exon
CCTGGATATGTTCGTTCTAT+GGG 0.468156 8_3:-38731408 Msa1287550:CDS
TTCATATTGACGCAACCGAT+TGG 0.468242 8_3:-38732231 Msa1287550:CDS
TATGTCTCTTGGACTGGTGC+AGG 0.469462 8_3:+38738619 None:intergenic
TAGAACGACATCTTCCTTTG+AGG 0.469558 8_3:-38731343 Msa1287550:CDS
AAAATACTAGTGAATTTCAA+TGG 0.472126 8_3:+38730397 None:intergenic
TTCACAAGTTGATATCTTGA+AGG 0.472450 8_3:-38731265 Msa1287550:CDS
TCATATTGACGCAACCGATT+GGG 0.474918 8_3:-38732230 Msa1287550:CDS
GTTCACGGAACATTATAAAT+GGG 0.475326 8_3:-38732290 Msa1287550:CDS
CCCATAGAACGAACATATCC+AGG 0.481659 8_3:+38731408 None:intergenic
CGTTCAAGGTTTGTACAACC+TGG 0.487622 8_3:-38738727 Msa1287550:CDS
CACTGGTGTAGGTGGTGGAG+GGG 0.488426 8_3:+38738651 None:intergenic
AGTCTGTGAAGGGTCGTTCA+AGG 0.490917 8_3:-38738741 Msa1287550:intron
TAGTTAGTGGATATGTCTCT+TGG 0.491210 8_3:+38738608 None:intergenic
CATCTTCTCATTAGCCTCAA+AGG 0.493015 8_3:+38731329 None:intergenic
TTCTTATGTGTTAGATGGGG+CGG 0.497680 8_3:-38732713 Msa1287550:intron
GAGGAGCGCACACCATCTCT+TGG 0.499562 8_3:+38730518 None:intergenic
AAACCAGCTGCTTCTCCCAC+TGG 0.499632 8_3:+38732598 None:intergenic
CTCAAGGCGGTAACTAGACT+CGG 0.504021 8_3:+38730496 None:intergenic
CTTTCTTCCTAGTGTATGAT+GGG 0.511426 8_3:+38732126 None:intergenic
GGTGGTGTCACTGGTGTAGG+TGG 0.513206 8_3:+38738643 None:intergenic
CAACCAGTGGGAGAAGCAGC+TGG 0.515336 8_3:-38732601 Msa1287550:CDS
TATTTGTAGGAAGTGAAAGA+TGG 0.531532 8_3:-38732012 Msa1287550:intron
ATGTTCGTTCTATGGGACTT+GGG 0.532902 8_3:-38731401 Msa1287550:CDS
TCTTATGTGTTAGATGGGGC+GGG 0.533369 8_3:-38732712 Msa1287550:intron
TGCAAGGAAGAAAGATGAGT+TGG 0.534562 8_3:-38732098 Msa1287550:intron
TGTACAACCTGGAGCTCTTG+AGG 0.535574 8_3:-38738716 Msa1287550:CDS
AGTGGATATGTCTCTTGGAC+TGG 0.539201 8_3:+38738613 None:intergenic
GTCTCTTGGACTGGTGCAGG+TGG 0.540335 8_3:+38738622 None:intergenic
CTAACGACCCATCATACACT+AGG 0.543974 8_3:-38732133 Msa1287550:CDS
GTGTTTGGAAAAGAACATCC+TGG 0.570578 8_3:-38731426 Msa1287550:CDS
GTTTCTCATAAGGACTCCAA+AGG 0.591251 8_3:-38731958 Msa1287550:CDS
TGAAAGATGTCGGTTGTTCA+CGG 0.592168 8_3:-38732305 Msa1287550:CDS
TCGGTTGCGTCAATATGAAG+TGG 0.598286 8_3:+38732235 None:intergenic
TTTCTCATAAGGACTCCAAA+GGG 0.600033 8_3:-38731957 Msa1287550:CDS
TGAGAAGTAGAGATTTGAGA+TGG 0.601582 8_3:+38731372 None:intergenic
GATGTTGCTCATGATTCTCA+AGG 0.607683 8_3:+38730480 None:intergenic
GATGGTCGAGAATATAGTAG+GGG 0.608076 8_3:-38731994 Msa1287550:CDS
TGGCAGAAGACGATTCGACA+AGG 0.613484 8_3:+38739313 None:intergenic
AATGGAAGGATGAAAGATGT+CGG 0.615646 8_3:-38732315 Msa1287550:CDS
TAGGAAGAAAGTCTCTTGCA+AGG 0.616020 8_3:-38732114 Msa1287550:CDS
AGGAAGATGTCGTTCTAGCA+CGG 0.619577 8_3:+38731349 None:intergenic
GACATATCCACTAACTAGCA+AGG 0.624395 8_3:-38738602 Msa1287550:CDS
ATGGAAGGGTCGTCAACCAG+TGG 0.625282 8_3:-38732614 Msa1287550:intron
AATCATGAGCAACATCACTA+GGG 0.626001 8_3:-38730473 Msa1287550:exon
AACACAGAATCACCAAGAGA+TGG 0.631041 8_3:-38730530 Msa1287550:CDS
AGGGCTATATGTCAATGAAG+AGG 0.637610 8_3:-38731938 Msa1287550:CDS
AAGTATTGGAAGGAAATGGA+AGG 0.638343 8_3:-38732329 Msa1287550:CDS
AGTCTCTATACATTCTAGCA+AGG 0.643092 8_3:+38732554 None:intergenic
TGGAAGGGTCGTCAACCAGT+GGG 0.644048 8_3:-38732613 Msa1287550:intron
TGATATCTTGAAGGAACAAG+CGG 0.645678 8_3:-38731256 Msa1287550:CDS
GGCAGAAGACGATTCGACAA+GGG 0.647309 8_3:+38739314 None:intergenic
TAGCAAGGTGACAACACCGC+CGG 0.658057 8_3:-38738587 Msa1287550:CDS
AACACCGCCGGCAATAGTCG+AGG 0.661998 8_3:-38738575 Msa1287550:intron
GTGGTAAGTCATGCGAACGG+AGG 0.681251 8_3:+38738677 None:intergenic
CTTGTGGTAAGTCATGCGAA+CGG 0.699540 8_3:+38738674 None:intergenic
TGACACCATATGAATATGCG+CGG 0.712955 8_3:-38739401 Msa1287550:CDS
GTTGCTCATGATTCTCAAGG+CGG 0.724849 8_3:+38730483 None:intergenic
GTCACCTCGACTATTGCCGG+CGG 0.727014 8_3:+38738571 None:intergenic
AAGGCGGTAACTAGACTCGG+AGG 0.743296 8_3:+38730499 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACTATTCTTTTAAAAAAAAT+TGG + chr8_3:38734975-38734994 None:intergenic 10.0%
!! TGATAATAAAAAATATCATT+CGG + chr8_3:38738936-38738955 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr8_3:38731544-38731563 Msa1287550:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr8_3:38731544-38731563 Msa1287550:intron 100.0%
!!! AGTTTAATTTTATTTTGTTC+CGG - chr8_3:38730283-38730302 Msa1287550:three_prime_UTR 15.0%
!! TTTAGAAACAAAACATATTA+TGG - chr8_3:38730320-38730339 Msa1287550:three_prime_UTR 15.0%
!! ATCAGAAATCAATAAAAAAA+AGG + chr8_3:38730776-38730795 None:intergenic 15.0%
!! AACAAAGAAAAAATAACTAT+AGG + chr8_3:38731212-38731231 None:intergenic 15.0%
!!! TATAGTTATTTTTTCTTTGT+TGG - chr8_3:38731211-38731230 Msa1287550:intron 15.0%
!!! TTGCTAAAAATATTTTTAAG+TGG + chr8_3:38732357-38732376 None:intergenic 15.0%
!! TGCTAAAAATATGAATATAA+AGG - chr8_3:38732384-38732403 Msa1287550:intron 15.0%
!! GCTAAAAATATGAATATAAA+GGG - chr8_3:38732385-38732404 Msa1287550:intron 15.0%
!!! TAGTTATATTTTTGTAAGTA+TGG + chr8_3:38732735-38732754 None:intergenic 15.0%
!!! TTTTAGTTTTAACATAAAAG+TGG + chr8_3:38733249-38733268 None:intergenic 15.0%
!! ATGAAAATTAGATTTAATTG+TGG + chr8_3:38733341-38733360 None:intergenic 15.0%
!!! TTTAACAAAAACTGTTTTAT+TGG - chr8_3:38734302-38734321 Msa1287550:intron 15.0%
!!! TTGCTAAAAATATTTTTAAG+TGG + chr8_3:38732357-38732376 None:intergenic 15.0%
!! TGCTAAAAATATGAATATAA+AGG - chr8_3:38732384-38732403 Msa1287550:intron 15.0%
!! GCTAAAAATATGAATATAAA+GGG - chr8_3:38732385-38732404 Msa1287550:intron 15.0%
!!! TAGTTATATTTTTGTAAGTA+TGG + chr8_3:38732735-38732754 None:intergenic 15.0%
!! AAAAAAAGACATCTAAATAT+TGG - chr8_3:38737186-38737205 Msa1287550:intron 15.0%
!! AAAAAAGACATCTAAATATT+GGG - chr8_3:38737187-38737206 Msa1287550:intron 15.0%
!! AGTTTATGATGAAAAAATAA+AGG - chr8_3:38737537-38737556 Msa1287550:intron 15.0%
!! GATAATAAAAAATATCATTC+GGG + chr8_3:38738935-38738954 None:intergenic 15.0%
!! TTTAGATAGTAATTTAGTTA+AGG - chr8_3:38739214-38739233 Msa1287550:intron 15.0%
!! AAAAACAACATTATTCAAAA+TGG + chr8_3:38739396-38739415 None:intergenic 15.0%
!!! TTTTAATTAAGTTCAATGTA+TGG - chr8_3:38739732-38739751 Msa1287550:intron 15.0%
!! AACCATTTCTTAAATATTGA+AGG - chr8_3:38730425-38730444 Msa1287550:three_prime_UTR 20.0%
!!! TTTATCGATGATCTTATTTA+TGG - chr8_3:38730480-38730499 Msa1287550:CDS 20.0%
!!! TTTATTGATTTCTGATTCAT+CGG - chr8_3:38730780-38730799 Msa1287550:intron 20.0%
!! AACTTAGATTTGATGTTTAA+AGG - chr8_3:38730957-38730976 Msa1287550:intron 20.0%
!! TTATGTTAGAAAGATTGTTA+GGG + chr8_3:38731811-38731830 None:intergenic 20.0%
!! TTTATGTTAGAAAGATTGTT+AGG + chr8_3:38731812-38731831 None:intergenic 20.0%
!!! AATTATTGTTTAAGATAGTG+GGG + chr8_3:38731944-38731963 None:intergenic 20.0%
!!! GAATTATTGTTTAAGATAGT+GGG + chr8_3:38731945-38731964 None:intergenic 20.0%
!!! AGAATTATTGTTTAAGATAG+TGG + chr8_3:38731946-38731965 None:intergenic 20.0%
!! ATTGAAGAATAACAAATGTA+TGG - chr8_3:38732000-38732019 Msa1287550:CDS 20.0%
!! AAACTTTCATTCAAATTGTT+TGG + chr8_3:38732113-38732132 None:intergenic 20.0%
!! ATTCTCAATTGAATTTATAG+AGG - chr8_3:38732198-38732217 Msa1287550:CDS 20.0%
!!! AAAATATTTTTAAGTGGCAA+CGG + chr8_3:38732351-38732370 None:intergenic 20.0%
!! TATGTGACATAATTGATTAT+GGG + chr8_3:38732488-38732507 None:intergenic 20.0%
!! TTATGTGACATAATTGATTA+TGG + chr8_3:38732489-38732508 None:intergenic 20.0%
!! GATTTATCATTCTTAACTTA+TGG + chr8_3:38732701-38732720 None:intergenic 20.0%
!! AGAATGATAAATCAAAGATA+AGG - chr8_3:38732708-38732727 Msa1287550:intron 20.0%
!! ATCATCAAAAAGAAGAAAAA+AGG - chr8_3:38733034-38733053 Msa1287550:intron 20.0%
!! AAATTAGATTTAATTGTGGT+TGG + chr8_3:38733337-38733356 None:intergenic 20.0%
!!! GATATTAGGAAATCAATTTT+TGG - chr8_3:38733390-38733409 Msa1287550:intron 20.0%
!! CATTCTTTCAACAAAAAAAA+TGG + chr8_3:38733638-38733657 None:intergenic 20.0%
!! GATATACTTGATATTCTTAA+AGG + chr8_3:38733741-38733760 None:intergenic 20.0%
!!! ATTTATTGGTGGTTAAATAA+TGG + chr8_3:38733850-38733869 None:intergenic 20.0%
!! TTCGAATTAATATTTATTGG+TGG + chr8_3:38733861-38733880 None:intergenic 20.0%
!! TGGTTCGAATTAATATTTAT+TGG + chr8_3:38733864-38733883 None:intergenic 20.0%
!!! GTTTTTATTGCAACATAAAA+GGG + chr8_3:38734089-38734108 None:intergenic 20.0%
!!! TGTTTTTATTGCAACATAAA+AGG + chr8_3:38734090-38734109 None:intergenic 20.0%
!!! TTCTCTAAAGGAAATAATTT+TGG + chr8_3:38734138-38734157 None:intergenic 20.0%
!! GTTAAGAATAATTTCTCTAA+AGG + chr8_3:38734150-38734169 None:intergenic 20.0%
!!! GTGATCAAAAATTTTGAAAA+AGG + chr8_3:38734417-38734436 None:intergenic 20.0%
!!! AAAAGTGTTATTTGACAAAA+AGG + chr8_3:38735507-38735526 None:intergenic 20.0%
!!! TGTCAAATAACACTTTTTTT+CGG - chr8_3:38735510-38735529 Msa1287550:intron 20.0%
!!! ATTATGATTTCTGGAAAATT+AGG + chr8_3:38735664-38735683 None:intergenic 20.0%
!! TTATAATCTGAACTTACAAT+TGG + chr8_3:38735801-38735820 None:intergenic 20.0%
!! TTATGTTAGAAAGATTGTTA+GGG + chr8_3:38731811-38731830 None:intergenic 20.0%
!! TTTATGTTAGAAAGATTGTT+AGG + chr8_3:38731812-38731831 None:intergenic 20.0%
!!! AATTATTGTTTAAGATAGTG+GGG + chr8_3:38731944-38731963 None:intergenic 20.0%
!!! GAATTATTGTTTAAGATAGT+GGG + chr8_3:38731945-38731964 None:intergenic 20.0%
!!! AGAATTATTGTTTAAGATAG+TGG + chr8_3:38731946-38731965 None:intergenic 20.0%
!! ATTGAAGAATAACAAATGTA+TGG - chr8_3:38732000-38732019 Msa1287550:CDS 20.0%
!! AAACTTTCATTCAAATTGTT+TGG + chr8_3:38732113-38732132 None:intergenic 20.0%
!!! AAAATATTTTTAAGTGGCAA+CGG + chr8_3:38732351-38732370 None:intergenic 20.0%
!! TATGTGACATAATTGATTAT+GGG + chr8_3:38732488-38732507 None:intergenic 20.0%
!! TTATGTGACATAATTGATTA+TGG + chr8_3:38732489-38732508 None:intergenic 20.0%
!! GATTTATCATTCTTAACTTA+TGG + chr8_3:38732701-38732720 None:intergenic 20.0%
!! AGAATGATAAATCAAAGATA+AGG - chr8_3:38732708-38732727 Msa1287550:intron 20.0%
!!! GTCTTTTTTTCAGTAATATT+CGG + chr8_3:38737176-38737195 None:intergenic 20.0%
!! ATAAGAAAGTAAGTCAAATA+TGG + chr8_3:38737290-38737309 None:intergenic 20.0%
!! TATTATATGTGGTTATTTGT+AGG - chr8_3:38737991-38738010 Msa1287550:intron 20.0%
!! ATAATTGTACAATTTCATTC+AGG + chr8_3:38738220-38738239 None:intergenic 20.0%
!! TTATTATCAACATCAGTTTA+AGG - chr8_3:38738947-38738966 Msa1287550:intron 20.0%
!!! AATTTGAAATTAACTATGCA+TGG - chr8_3:38739052-38739071 Msa1287550:intron 20.0%
!!! TATGATGAAATAGCTTTAAT+TGG - chr8_3:38739166-38739185 Msa1287550:intron 20.0%
!!! AAATAGCTTTAATTGGATTA+GGG - chr8_3:38739173-38739192 Msa1287550:intron 20.0%
!! AAAATACTAGTGAATTTCAA+TGG + chr8_3:38739622-38739641 None:intergenic 20.0%
!!! ATTGAAATTCACTAGTATTT+TGG - chr8_3:38739621-38739640 Msa1287550:intron 20.0%
!! GAATATTGTAGTTTTCATTG+AGG - chr8_3:38730373-38730392 Msa1287550:three_prime_UTR 25.0%
! GTCCTTCAATATTTAAGAAA+TGG + chr8_3:38730430-38730449 None:intergenic 25.0%
!! CTTGTACACTTGATAATATA+TGG - chr8_3:38730449-38730468 Msa1287550:three_prime_UTR 25.0%
!!! TTGCTTAATTTTGATCTCAT+CGG - chr8_3:38730862-38730881 Msa1287550:intron 25.0%
! AGATTTGATGTTTAAAGGAT+AGG - chr8_3:38730962-38730981 Msa1287550:intron 25.0%
! TAAGATCACAGTCATAAATA+TGG + chr8_3:38731252-38731271 None:intergenic 25.0%
!! AATTAGGTTTCTAGGAATAT+TGG - chr8_3:38731570-38731589 Msa1287550:intron 25.0%
! ATACCTTCATCATTATTTAC+CGG + chr8_3:38731632-38731651 None:intergenic 25.0%
!! AATAATGATGAAGGTATGAA+TGG - chr8_3:38731635-38731654 Msa1287550:intron 25.0%
! TGGAGAAAAATAAAAGAGTA+AGG - chr8_3:38731655-38731674 Msa1287550:intron 25.0%
! TATGTTAGAAAGATTGTTAG+GGG + chr8_3:38731810-38731829 None:intergenic 25.0%
! TATCTTGTGATTGTTGTAAA+AGG + chr8_3:38731917-38731936 None:intergenic 25.0%
!! ATTATTGTTTAAGATAGTGG+GGG + chr8_3:38731943-38731962 None:intergenic 25.0%
! ATCAATATCACTCTAACAAA+TGG - chr8_3:38732035-38732054 Msa1287550:intron 25.0%
! AATATGAATATAAAGGGCAA+TGG - chr8_3:38732391-38732410 Msa1287550:intron 25.0%
! TTATGCAATAAGAAATACGA+TGG - chr8_3:38732440-38732459 Msa1287550:intron 25.0%
!! TTATGGGTTTTCTTATCAAT+TGG + chr8_3:38732472-38732491 None:intergenic 25.0%
!!! TCTTTTTGATGATGTCAAAA+GGG + chr8_3:38733027-38733046 None:intergenic 25.0%
!!! TTCTTTTTGATGATGTCAAA+AGG + chr8_3:38733028-38733047 None:intergenic 25.0%
! AGAAAAAAGGTAAAATCCAA+AGG - chr8_3:38733047-38733066 Msa1287550:intron 25.0%
! GAAAAAAGGTAAAATCCAAA+GGG - chr8_3:38733048-38733067 Msa1287550:intron 25.0%
! TGATTCAGTAAGATGATATT+AGG - chr8_3:38733376-38733395 Msa1287550:intron 25.0%
! GTCATCATATATATGGTATT+AGG + chr8_3:38733613-38733632 None:intergenic 25.0%
! AATGGTTGTCATCATATATA+TGG + chr8_3:38733620-38733639 None:intergenic 25.0%
!! ATTTGTTTAAGATAAGTGTG+TGG + chr8_3:38733714-38733733 None:intergenic 25.0%
! ATATCTTCTCACATTAAGAT+TGG + chr8_3:38733913-38733932 None:intergenic 25.0%
! AGTACTATTAATTGTCTTGT+AGG + chr8_3:38733954-38733973 None:intergenic 25.0%
! GACAATTAATAGTACTTTCT+AGG - chr8_3:38733958-38733977 Msa1287550:intron 25.0%
! TCCTTATGGTGAATTTATTT+GGG + chr8_3:38734028-38734047 None:intergenic 25.0%
! TTCCTTATGGTGAATTTATT+TGG + chr8_3:38734029-38734048 None:intergenic 25.0%
! TTTCTTATGTAGCAAGTATT+TGG - chr8_3:38734057-38734076 Msa1287550:intron 25.0%
! AATTCTTTGATTCACATTCT+TGG - chr8_3:38734224-38734243 Msa1287550:intron 25.0%
! TTTCTTAGTTTCTATGTTGT+TGG - chr8_3:38734266-38734285 Msa1287550:intron 25.0%
! TTCTTAGTTTCTATGTTGTT+GGG - chr8_3:38734267-38734286 Msa1287550:intron 25.0%
!!! AAAACTGTTTTATTGGTGTT+TGG - chr8_3:38734309-38734328 Msa1287550:intron 25.0%
! AGATATTCAAACAACAAATC+CGG + chr8_3:38734360-38734379 None:intergenic 25.0%
!!! AATTTTGAAAAAGGTCACAA+TGG + chr8_3:38734408-38734427 None:intergenic 25.0%
!! AAGACTTTTCTTTTCAGATA+TGG - chr8_3:38735163-38735182 Msa1287550:intron 25.0%
! AAATAAACTTGAAGATTCTC+AGG + chr8_3:38735223-38735242 None:intergenic 25.0%
!! CTTCAAGTTTATTTCATTGT+TGG - chr8_3:38735229-38735248 Msa1287550:intron 25.0%
! TTCTCCTAAAAATGATTTAG+CGG - chr8_3:38735724-38735743 Msa1287550:intron 25.0%
!! AATTAGGTTTCTAGGAATAT+TGG - chr8_3:38731570-38731589 Msa1287550:intron 25.0%
! ATACCTTCATCATTATTTAC+CGG + chr8_3:38731632-38731651 None:intergenic 25.0%
!! AATAATGATGAAGGTATGAA+TGG - chr8_3:38731635-38731654 Msa1287550:intron 25.0%
! TGGAGAAAAATAAAAGAGTA+AGG - chr8_3:38731655-38731674 Msa1287550:intron 25.0%
! TATGTTAGAAAGATTGTTAG+GGG + chr8_3:38731810-38731829 None:intergenic 25.0%
! TTGTAAAAGGTTCTTTGAAT+CGG + chr8_3:38736172-38736191 None:intergenic 25.0%
! TATCTTGTGATTGTTGTAAA+AGG + chr8_3:38731917-38731936 None:intergenic 25.0%
!! ATTATTGTTTAAGATAGTGG+GGG + chr8_3:38731943-38731962 None:intergenic 25.0%
! ATCAATATCACTCTAACAAA+TGG - chr8_3:38732035-38732054 Msa1287550:intron 25.0%
! ATTCTCAATTGAATTCATAG+AGG - chr8_3:38736466-38736485 Msa1287550:intron 25.0%
! AATATGAATATAAAGGGCAA+TGG - chr8_3:38732391-38732410 Msa1287550:intron 25.0%
! TTATGCAATAAGAAATACGA+TGG - chr8_3:38732440-38732459 Msa1287550:intron 25.0%
!! TTATGGGTTTTCTTATCAAT+TGG + chr8_3:38732472-38732491 None:intergenic 25.0%
!!! AGTTTTAGTATTGCTTCATA+TGG - chr8_3:38736887-38736906 Msa1287550:intron 25.0%
! TATTGGGATTTAGAAGTTAT+AGG - chr8_3:38737203-38737222 Msa1287550:intron 25.0%
! TTACTTTCTTATGTGTTAGA+TGG - chr8_3:38737298-38737317 Msa1287550:intron 25.0%
! TACTTTCTTATGTGTTAGAT+GGG - chr8_3:38737299-38737318 Msa1287550:intron 25.0%
!!! ACTTTAGTTTTTGTTTTCTC+TGG + chr8_3:38737520-38737539 None:intergenic 25.0%
!!! ACAAAATTTGTTGTTGATGA+TGG - chr8_3:38737640-38737659 Msa1287550:intron 25.0%
!!! AGCTATATTTTGACAAGTAT+TGG - chr8_3:38737673-38737692 Msa1287550:intron 25.0%
!!! ATATTTTGACAAGTATTGGA+AGG - chr8_3:38737677-38737696 Msa1287550:intron 25.0%
!! AATGTTTTCAGTTTCTCATA+AGG - chr8_3:38738048-38738067 Msa1287550:intron 25.0%
! ATACACACGACATTAATAAA+AGG + chr8_3:38738133-38738152 None:intergenic 25.0%
!!! AACAACATTAACTTGTATCA+TGG + chr8_3:38738163-38738182 None:intergenic 25.0%
!! ATTATGAACAAGTTTGACTT+AGG - chr8_3:38738241-38738260 Msa1287550:intron 25.0%
!!! ACATGATTGATGATTCATTT+TGG - chr8_3:38738275-38738294 Msa1287550:intron 25.0%
! TAATTTCAAATTACTACAGC+AGG + chr8_3:38739044-38739063 None:intergenic 25.0%
! ATGCAATACATCATCAATTA+CGG + chr8_3:38739084-38739103 None:intergenic 25.0%
!!! TAATTGATGATGTATTGCAT+CGG - chr8_3:38739084-38739103 Msa1287550:intron 25.0%
! TTTGCAGCAAGTATATAAAA+AGG + chr8_3:38739129-38739148 None:intergenic 25.0%
!! ATATACTTGCTGCAAATTAT+AGG - chr8_3:38739133-38739152 Msa1287550:intron 25.0%
!!! GAAATAGCTTTAATTGGATT+AGG - chr8_3:38739172-38739191 Msa1287550:intron 25.0%
! GTAAAAACATACAAAATCCA+AGG + chr8_3:38739314-38739333 None:intergenic 25.0%
!!! GGATTTTGTATGTTTTTACT+TGG - chr8_3:38739315-38739334 Msa1287550:CDS 25.0%
!!! TATGTTTTTACTTGGTTGTT+TGG - chr8_3:38739323-38739342 Msa1287550:CDS 25.0%
!!! TGTTTGGTGTTATTTTTACA+AGG - chr8_3:38739339-38739358 Msa1287550:CDS 25.0%
! AATCAAGTTCATTCAATGTA+TGG - chr8_3:38739679-38739698 Msa1287550:intron 25.0%
! ATTTGAGTTACTTGCATCAT+TGG - chr8_3:38730253-38730272 Msa1287550:three_prime_UTR 30.0%
GGTTAAAACTAGAGAAGAAT+AGG + chr8_3:38730409-38730428 None:intergenic 30.0%
TCAATAAATCATACCGATGA+AGG + chr8_3:38730737-38730756 None:intergenic 30.0%
!! TTTCTGATTCATCGGTTTAA+AGG - chr8_3:38730788-38730807 Msa1287550:intron 30.0%
CTCACTACAAAGTTAAATTC+AGG + chr8_3:38731079-38731098 None:intergenic 30.0%
ATCACAGTCATAAATATGGA+GGG + chr8_3:38731248-38731267 None:intergenic 30.0%
! TGATCTTATTTAGTCTGTGA+AGG - chr8_3:38731264-38731283 Msa1287550:CDS 30.0%
! GATCTTATTTAGTCTGTGAA+GGG - chr8_3:38731265-38731284 Msa1287550:CDS 30.0%
GGTTATAATCTGAACTTACA+GGG + chr8_3:38731519-38731538 None:intergenic 30.0%
AGGTTATAATCTGAACTTAC+AGG + chr8_3:38731520-38731539 None:intergenic 30.0%
!! TTTTAAGAGTTTCGTGTTGT+TGG - chr8_3:38731598-38731617 Msa1287550:intron 30.0%
TTTCCGGTAAATAATGATGA+AGG - chr8_3:38731626-38731645 Msa1287550:intron 30.0%
ATGACACAAGAGAATTATAG+TGG - chr8_3:38731687-38731706 Msa1287550:intron 30.0%
ATGTTAGAAAGATTGTTAGG+GGG + chr8_3:38731809-38731828 None:intergenic 30.0%
TTGTAAAAGGTTCTTGAATC+GGG + chr8_3:38731904-38731923 None:intergenic 30.0%
GTTGTAAAAGGTTCTTGAAT+CGG + chr8_3:38731905-38731924 None:intergenic 30.0%
! TTGCCAATTCTTTTACAAAC+AGG - chr8_3:38732267-38732286 Msa1287550:CDS 30.0%
! TGCCAATTCTTTTACAAACA+GGG - chr8_3:38732268-38732287 Msa1287550:CDS 30.0%
! CCACCTTTTGAATTTTACAA+CGG + chr8_3:38732294-38732313 None:intergenic 30.0%
AAAATTCAAAAGGTGGTTGT+TGG - chr8_3:38732298-38732317 Msa1287550:CDS 30.0%
!! AGTTTTAGCATTGCTTCATA+TGG - chr8_3:38732626-38732645 Msa1287550:intron 30.0%
TCACAAAAGAAGAAAAACCA+TGG + chr8_3:38732800-38732819 None:intergenic 30.0%
! TGGTTTGTCATCATCAAAAA+GGG + chr8_3:38732885-38732904 None:intergenic 30.0%
! ATGGTTTGTCATCATCAAAA+AGG + chr8_3:38732886-38732905 None:intergenic 30.0%
CAAACATTGTCAAAAGGATA+TGG + chr8_3:38732905-38732924 None:intergenic 30.0%
GTTGATCAAACATTGTCAAA+AGG + chr8_3:38732911-38732930 None:intergenic 30.0%
TATCCAATTGCAAAACAAAG+GGG + chr8_3:38732961-38732980 None:intergenic 30.0%
GTATCCAATTGCAAAACAAA+GGG + chr8_3:38732962-38732981 None:intergenic 30.0%
TTTCGTGCTTAAATTGTTTC+AGG + chr8_3:38732984-38733003 None:intergenic 30.0%
!!! TTTTTGATGATGTCAAAAGG+GGG + chr8_3:38733025-38733044 None:intergenic 30.0%
!!! CTTTTTGATGATGTCAAAAG+GGG + chr8_3:38733026-38733045 None:intergenic 30.0%
GAACAATGAAGTTTCAAAGA+AGG - chr8_3:38733685-38733704 Msa1287550:intron 30.0%
! AATACATGTACCTTTTACCA+TGG - chr8_3:38733780-38733799 Msa1287550:intron 30.0%
AATGTGAGAAGATATGCATA+TGG - chr8_3:38733918-38733937 Msa1287550:intron 30.0%
!! AAGAAAAGTATTAACCCACA+AGG + chr8_3:38734003-38734022 None:intergenic 30.0%
ACCCAAATAAATTCACCATA+AGG - chr8_3:38734024-38734043 Msa1287550:intron 30.0%
! ACTTGCTACATAAGAAACTT+TGG + chr8_3:38734054-38734073 None:intergenic 30.0%
AAATTTAGAAAAACCAAGCC+CGG - chr8_3:38734338-38734357 Msa1287550:intron 30.0%
GATATTCAAACAACAAATCC+GGG + chr8_3:38734359-38734378 None:intergenic 30.0%
TGCAGAAGTAGAATTAGAAA+AGG + chr8_3:38734502-38734521 None:intergenic 30.0%
! AACCTCATTTTCTTCATCAT+TGG - chr8_3:38734665-38734684 Msa1287550:intron 30.0%
TTCCAATGATGAAGAAAATG+AGG + chr8_3:38734670-38734689 None:intergenic 30.0%
TGAATTCTTTCTTTCCTTTG+TGG - chr8_3:38734793-38734812 Msa1287550:intron 30.0%
AATTTCACATGTTTCGAATG+TGG + chr8_3:38734870-38734889 None:intergenic 30.0%
ACATAAGAACATTTCCTTGA+AGG + chr8_3:38735051-38735070 None:intergenic 30.0%
! TCAGATATGGCTATAACTTT+TGG - chr8_3:38735176-38735195 Msa1287550:intron 30.0%
CAGAATTTCTAACTGCAAAA+CGG + chr8_3:38735441-38735460 None:intergenic 30.0%
TATCAAACCACAAACATCAT+GGG + chr8_3:38735546-38735565 None:intergenic 30.0%
!! GCTAAATCATTTTTAGGAGA+AGG + chr8_3:38735725-38735744 None:intergenic 30.0%
AGTTCAGATTATAACCTAAG+AGG - chr8_3:38735807-38735826 Msa1287550:intron 30.0%
GTTCAGATTATAACCTAAGA+GGG - chr8_3:38735808-38735827 Msa1287550:intron 30.0%
TTCAGATTATAACCTAAGAG+GGG - chr8_3:38735809-38735828 Msa1287550:intron 30.0%
!! TTTTAAGAGTTTCGTGTTGT+TGG - chr8_3:38731598-38731617 Msa1287550:intron 30.0%
TTTCCGGTAAATAATGATGA+AGG - chr8_3:38731626-38731645 Msa1287550:intron 30.0%
ATGACACAAGAGAATTATAG+TGG - chr8_3:38731687-38731706 Msa1287550:intron 30.0%
ATGTTAGAAAGATTGTTAGG+GGG + chr8_3:38731809-38731828 None:intergenic 30.0%
TGTAAAAGGTTCTTTGAATC+GGG + chr8_3:38736171-38736190 None:intergenic 30.0%
ACAATAATTCTCACCAACAA+TGG - chr8_3:38736223-38736242 Msa1287550:intron 30.0%
! TTGCCAATTCTTTTACAAAC+AGG - chr8_3:38732267-38732286 Msa1287550:CDS 30.0%
! TGCCAATTCTTTTACAAACA+GGG - chr8_3:38732268-38732287 Msa1287550:CDS 30.0%
! CCACCTTTTGAATTTTACAA+CGG + chr8_3:38732294-38732313 None:intergenic 30.0%
AGTTGAAGAATGAAGACAAT+GGG + chr8_3:38737031-38737050 None:intergenic 30.0%
AAGTTGAAGAATGAAGACAA+TGG + chr8_3:38737032-38737051 None:intergenic 30.0%
TCACAAAAGAAGAAAAACCA+TGG + chr8_3:38732800-38732819 None:intergenic 30.0%
ACTTTCTTATGTGTTAGATG+GGG - chr8_3:38737300-38737319 Msa1287550:intron 30.0%
GTTATTATCCTTGTTCCATT+AGG + chr8_3:38737379-38737398 None:intergenic 30.0%
GAACAAGGATAATAACAAGA+TGG - chr8_3:38737383-38737402 Msa1287550:intron 30.0%
AAGGATAATAACAAGATGGA+AGG - chr8_3:38737387-38737406 Msa1287550:intron 30.0%
AGGATAATAACAAGATGGAA+GGG - chr8_3:38737388-38737407 Msa1287550:intron 30.0%
!!! TGGTTTTTTAGCGAGTTTTT+TGG - chr8_3:38737435-38737454 Msa1287550:intron 30.0%
!!! GGTTTTTTAGCGAGTTTTTT+GGG - chr8_3:38737436-38737455 Msa1287550:intron 30.0%
TTCCGATAATGTTTGAAAGT+TGG - chr8_3:38737485-38737504 Msa1287550:intron 30.0%
TCCGATAATGTTTGAAAGTT+GGG - chr8_3:38737486-38737505 Msa1287550:intron 30.0%
TCCCAACTTTCAAACATTAT+CGG + chr8_3:38737490-38737509 None:intergenic 30.0%
TGTTCACGGAACATTATAAA+TGG - chr8_3:38737725-38737744 Msa1287550:intron 30.0%
GTTCACGGAACATTATAAAT+GGG - chr8_3:38737726-38737745 Msa1287550:intron 30.0%
GCACAAGTACTTATTATATG+TGG - chr8_3:38737980-38737999 Msa1287550:intron 30.0%
TATTTGTAGGAAGTGAAAGA+TGG - chr8_3:38738004-38738023 Msa1287550:intron 30.0%
TGTTCTAATTGTTCTTTGCT+TGG - chr8_3:38738179-38738198 Msa1287550:intron 30.0%
GTACAATTTCATTCAGGAAA+AGG + chr8_3:38738214-38738233 None:intergenic 30.0%
!!! TGTTTTTTCATGTAGCATTG+TGG - chr8_3:38738393-38738412 Msa1287550:intron 30.0%
! GGCTCTTATTTGATAAACAA+AGG + chr8_3:38738501-38738520 None:intergenic 30.0%
! ATCCTTAAGTGAATCGATTT+CGG + chr8_3:38738726-38738745 None:intergenic 30.0%
! AATCGATTCACTTAAGGATA+AGG - chr8_3:38738727-38738746 Msa1287550:CDS 30.0%
!! TTCACAAGTTGATATCTTGA+AGG - chr8_3:38738751-38738770 Msa1287550:intron 30.0%
! GGATTAGGATGTTAAGTTTT+AGG - chr8_3:38738859-38738878 Msa1287550:intron 30.0%
!!! AGGATGTTAAGTTTTAGGTA+AGG - chr8_3:38738864-38738883 Msa1287550:intron 30.0%
!!! GGATGTTAAGTTTTAGGTAA+GGG - chr8_3:38738865-38738884 Msa1287550:intron 30.0%
!! GTATACAATTTGGTTTGGTT+TGG + chr8_3:38738908-38738927 None:intergenic 30.0%
GAAGTGTATACAATTTGGTT+TGG + chr8_3:38738913-38738932 None:intergenic 30.0%
! TGGATCAACATTCATACTTT+TGG - chr8_3:38739752-38739771 Msa1287550:intron 30.0%
! TCAACATTCATACTTTTGGA+TGG - chr8_3:38739756-38739775 Msa1287550:intron 30.0%
!!! ATGGTGTCATCTTTTTCACA+AGG + chr8_3:38730604-38730623 None:intergenic 35.0%
TGCCACTAAAAAACCTTCAT+CGG - chr8_3:38730721-38730740 Msa1287550:intron 35.0%
!!! TACCGATGAAGGTTTTTTAG+TGG + chr8_3:38730726-38730745 None:intergenic 35.0%
! TAAATATGGAGGGATTTGGT+TGG + chr8_3:38731238-38731257 None:intergenic 35.0%
GTCATAAATATGGAGGGATT+TGG + chr8_3:38731242-38731261 None:intergenic 35.0%
GATCACAGTCATAAATATGG+AGG + chr8_3:38731249-38731268 None:intergenic 35.0%
! TAGTTAGTGGATATGTCTCT+TGG + chr8_3:38731411-38731430 None:intergenic 35.0%
AACAGAATGATTGTGTGATG+TGG + chr8_3:38731491-38731510 None:intergenic 35.0%
TAATCTGAACTTACAGGGAA+TGG + chr8_3:38731514-38731533 None:intergenic 35.0%
AGTTCAGATTATAACCTGAG+AGG - chr8_3:38731523-38731542 Msa1287550:intron 35.0%
GTTCAGATTATAACCTGAGA+GGG - chr8_3:38731524-38731543 Msa1287550:intron 35.0%
TTCAGATTATAACCTGAGAG+GGG - chr8_3:38731525-38731544 Msa1287550:intron 35.0%
!!! CGTGTTGTTGGTTATTTTTC+CGG - chr8_3:38731610-38731629 Msa1287550:intron 35.0%
TAACATAGTGAATTCCTTCG+CGG + chr8_3:38731754-38731773 None:intergenic 35.0%
ACAATAATTCTCGCCAACAA+TGG - chr8_3:38731955-38731974 Msa1287550:CDS 35.0%
GTAAAGTTTCTTGCCATTGT+TGG + chr8_3:38731971-38731990 None:intergenic 35.0%
CCGTTGTAAAATTCAAAAGG+TGG - chr8_3:38732291-38732310 Msa1287550:CDS 35.0%
AGTCGAAGAATGAAGACAAT+GGG + chr8_3:38732770-38732789 None:intergenic 35.0%
AAGTCGAAGAATGAAGACAA+TGG + chr8_3:38732771-38732790 None:intergenic 35.0%
CAAAAGAAGAAAAACCATGG+AGG + chr8_3:38732797-38732816 None:intergenic 35.0%
! TTTCCTTCTTAGACTTGGTT+GGG + chr8_3:38732845-38732864 None:intergenic 35.0%
! ATTTCCTTCTTAGACTTGGT+TGG + chr8_3:38732846-38732865 None:intergenic 35.0%
GAAGATTTCCTTCTTAGACT+TGG + chr8_3:38732850-38732869 None:intergenic 35.0%
GTTTGTCATCATCAAAAAGG+GGG + chr8_3:38732883-38732902 None:intergenic 35.0%
GGTTTGTCATCATCAAAAAG+GGG + chr8_3:38732884-38732903 None:intergenic 35.0%
ATCCAATTGCAAAACAAAGG+GGG + chr8_3:38732960-38732979 None:intergenic 35.0%
GGTATCCAATTGCAAAACAA+AGG + chr8_3:38732963-38732982 None:intergenic 35.0%
ATCCAAAGGGTCGTAATATA+AGG - chr8_3:38733061-38733080 Msa1287550:intron 35.0%
TTCCTTATATTACGACCCTT+TGG + chr8_3:38733066-38733085 None:intergenic 35.0%
TATGTGCAAAATCGAAGTGA+AGG + chr8_3:38733142-38733161 None:intergenic 35.0%
! CATATTTCTATCTATGGCCA+TGG + chr8_3:38733800-38733819 None:intergenic 35.0%
! AGCGCTCATATTTCTATCTA+TGG + chr8_3:38733806-38733825 None:intergenic 35.0%
TTAATTCGAACCATGTCACA+AGG - chr8_3:38733871-38733890 Msa1287550:intron 35.0%
AGATACAAAACCTTGTGACA+TGG + chr8_3:38733884-38733903 None:intergenic 35.0%
!! TCTAGGTACCCATTTTTCTT+TGG - chr8_3:38733975-38733994 Msa1287550:intron 35.0%
!! CTAGGTACCCATTTTTCTTT+GGG - chr8_3:38733976-38733995 Msa1287550:intron 35.0%
ACAAGGACCCAAAGAAAAAT+GGG + chr8_3:38733986-38734005 None:intergenic 35.0%
! ATTTTTCTTTGGGTCCTTGT+GGG - chr8_3:38733986-38734005 Msa1287550:intron 35.0%
!! AGAAACTTTGGTGTTCCTTA+TGG + chr8_3:38734042-38734061 None:intergenic 35.0%
TGAAAAAGGTCACAATGGTT+TGG + chr8_3:38734403-38734422 None:intergenic 35.0%
AAGTGCAAACATGACACTAA+TGG + chr8_3:38734703-38734722 None:intergenic 35.0%
GAAAGAATTCAAGCCAAGAA+GGG + chr8_3:38734784-38734803 None:intergenic 35.0%
AGAAAGAATTCAAGCCAAGA+AGG + chr8_3:38734785-38734804 None:intergenic 35.0%
TTGTTCTTCTTTGCAAGGAT+TGG - chr8_3:38734816-38734835 Msa1287550:intron 35.0%
TGTTCTTCTTTGCAAGGATT+GGG - chr8_3:38734817-38734836 Msa1287550:intron 35.0%
TGGAAATGAAGGTCACATAA+AGG + chr8_3:38734850-38734869 None:intergenic 35.0%
TGTTTCGAATGTGGAAATGA+AGG + chr8_3:38734861-38734880 None:intergenic 35.0%
AGTGATGTCTTCATCTTCAT+CGG - chr8_3:38734992-38735011 Msa1287550:intron 35.0%
ATCATCTTGTTGAACAGCAT+TGG - chr8_3:38735019-38735038 Msa1287550:intron 35.0%
TAAGAACATTTCCTTGAAGG+CGG + chr8_3:38735048-38735067 None:intergenic 35.0%
AAGTCTTTCAAACATGTCGT+TGG + chr8_3:38735150-38735169 None:intergenic 35.0%
! TGTTGGACAAAGTTTTTCCA+AGG - chr8_3:38735246-38735265 Msa1287550:intron 35.0%
! GTTGGACAAAGTTTTTCCAA+GGG - chr8_3:38735247-38735266 Msa1287550:intron 35.0%
!! ATGTCTAGAATGTTTTCTCC+TGG - chr8_3:38735308-38735327 Msa1287550:intron 35.0%
! ACTTTGGAAAGAACACATGA+AGG + chr8_3:38735401-38735420 None:intergenic 35.0%
ACATTCTTCAATCCTCTCTT+GGG + chr8_3:38735478-38735497 None:intergenic 35.0%
AACATTCTTCAATCCTCTCT+TGG + chr8_3:38735479-38735498 None:intergenic 35.0%
GTATCAAACCACAAACATCA+TGG + chr8_3:38735547-38735566 None:intergenic 35.0%
ATCCCAAATTTCTTCACCTT+GGG - chr8_3:38735619-38735638 Msa1287550:intron 35.0%
CCAGAAATCATAATGATCTC+CGG - chr8_3:38735670-38735689 Msa1287550:intron 35.0%
!! GCTTCCGCTAAATCATTTTT+AGG + chr8_3:38735731-38735750 None:intergenic 35.0%
TGTTTCTTTGATCCCGAAAA+TGG + chr8_3:38735753-38735772 None:intergenic 35.0%
TCAGATTATAACCTAAGAGG+GGG - chr8_3:38735810-38735829 Msa1287550:intron 35.0%
!!! CGTGTTGTTGGTTATTTTTC+CGG - chr8_3:38731610-38731629 Msa1287550:intron 35.0%
TAACATAGTGAATTCCTTCG+CGG + chr8_3:38731754-38731773 None:intergenic 35.0%
GTAAAGTTTCTTGCCATTGT+TGG + chr8_3:38731971-38731990 None:intergenic 35.0%
CCGTTGTAAAATTCAAAAGG+TGG - chr8_3:38732291-38732310 Msa1287550:CDS 35.0%
AAAATTCAAAAGGTGGCTGT+TGG - chr8_3:38736566-38736585 Msa1287550:intron 35.0%
CAAAAGAAGAAAAACCATGG+AGG + chr8_3:38732797-38732816 None:intergenic 35.0%
! TTTCCTTCTTAGACTTGGTT+GGG + chr8_3:38732845-38732864 None:intergenic 35.0%
! ATTTCCTTCTTAGACTTGGT+TGG + chr8_3:38732846-38732865 None:intergenic 35.0%
GAAGATTTCCTTCTTAGACT+TGG + chr8_3:38732850-38732869 None:intergenic 35.0%
TGTTTCAAACATGCGTTTAG+TGG - chr8_3:38737330-38737349 Msa1287550:intron 35.0%
TTTAGTGGTGTATGATGTGT+TGG - chr8_3:38737345-38737364 Msa1287550:intron 35.0%
TTGAATCTCCTAATGGAACA+AGG - chr8_3:38737368-38737387 Msa1287550:intron 35.0%
AGTCTCTATACATTCTAGCA+AGG + chr8_3:38737465-38737484 None:intergenic 35.0%
!! TGACAAGTATTGGAAGGAAA+TGG - chr8_3:38737683-38737702 Msa1287550:intron 35.0%
!! AAGTATTGGAAGGAAATGGA+AGG - chr8_3:38737687-38737706 Msa1287550:intron 35.0%
AATGGAAGGATGAAAGATGT+CGG - chr8_3:38737701-38737720 Msa1287550:intron 35.0%
TCGCAAGATTCACTTCTAAT+GGG + chr8_3:38737756-38737775 None:intergenic 35.0%
TTCGCAAGATTCACTTCTAA+TGG + chr8_3:38737757-38737776 None:intergenic 35.0%
! CTCTTTTTGTAGCATATAGG+CGG - chr8_3:38737809-38737828 Msa1287550:intron 35.0%
CTTTCTTCCTAGTGTATGAT+GGG + chr8_3:38737893-38737912 None:intergenic 35.0%
ACTTTCTTCCTAGTGTATGA+TGG + chr8_3:38737894-38737913 None:intergenic 35.0%
AAGATGGTCGAGAATATAGT+AGG - chr8_3:38738020-38738039 Msa1287550:intron 35.0%
AGATGGTCGAGAATATAGTA+GGG - chr8_3:38738021-38738040 Msa1287550:intron 35.0%
TTTCTCATAAGGACTCCAAA+GGG - chr8_3:38738059-38738078 Msa1287550:intron 35.0%
TTCATTGACATATAGCCCTT+TGG + chr8_3:38738077-38738096 None:intergenic 35.0%
AAGTAGACAAATTTCACTGC+TGG - chr8_3:38738307-38738326 Msa1287550:intron 35.0%
TGTTTATCAAATAAGAGCCC+TGG - chr8_3:38738502-38738521 Msa1287550:intron 35.0%
TTGTTCCTGCATATTATCCA+GGG + chr8_3:38738522-38738541 None:intergenic 35.0%
ATTGTTCCTGCATATTATCC+AGG + chr8_3:38738523-38738542 None:intergenic 35.0%
TTGACAAATGCTTCATTCTC+AGG + chr8_3:38738569-38738588 None:intergenic 35.0%
! GAAGCATTTGTCAAAGTGTT+TGG - chr8_3:38738575-38738594 Msa1287550:intron 35.0%
TGAGAAGTAGAGATTTGAGA+TGG + chr8_3:38738647-38738666 None:intergenic 35.0%
TGATATCTTGAAGGAACAAG+CGG - chr8_3:38738760-38738779 Msa1287550:intron 35.0%
! GCAGAATTCTAGAGAAAAAC+AGG - chr8_3:38738799-38738818 Msa1287550:intron 35.0%
! TTCGGGAAGTGTATACAATT+TGG + chr8_3:38738918-38738937 None:intergenic 35.0%
! GTTGTGTGGAATCATTGATT+TGG - chr8_3:38738980-38738999 Msa1287550:intron 35.0%
! TGATTTGGATTGCAAGTTTC+AGG - chr8_3:38738995-38739014 Msa1287550:intron 35.0%
! TTGGATTAGGGCTTCAAATT+TGG - chr8_3:38739185-38739204 Msa1287550:intron 35.0%
!!! TTTTGAACGCCTCTAGTTTT+AGG - chr8_3:38739248-38739267 Msa1287550:intron 35.0%
!!! TTTGAACGCCTCTAGTTTTA+GGG - chr8_3:38739249-38739268 Msa1287550:intron 35.0%
! GTTGTTGTTGTCAACTTCTT+TGG - chr8_3:38739281-38739300 Msa1287550:intron 35.0%
TTTACAAGGTCTGTTTGACT+TGG - chr8_3:38739353-38739372 Msa1287550:CDS 35.0%
AATCATGAGCAACATCACTA+GGG - chr8_3:38739543-38739562 Msa1287550:intron 35.0%
! CTAAAAAGCATGAACTCTGC+CGG + chr8_3:38730305-38730324 None:intergenic 40.0%
TAGAGAAGAATAGGCACATG+TGG + chr8_3:38730400-38730419 None:intergenic 40.0%
TGACACCATATGAATATGCG+CGG - chr8_3:38730615-38730634 Msa1287550:intron 40.0%
TTGTACCGCGCATATTCATA+TGG + chr8_3:38730623-38730642 None:intergenic 40.0%
GACATATCCACTAACTAGCA+AGG - chr8_3:38731414-38731433 Msa1287550:CDS 40.0%
TCAGATTATAACCTGAGAGG+GGG - chr8_3:38731526-38731545 Msa1287550:intron 40.0%
AACATAGTGAATTCCTTCGC+GGG + chr8_3:38731753-38731772 None:intergenic 40.0%
AAAGATTGTTAGGGGGTCTT+GGG + chr8_3:38731802-38731821 None:intergenic 40.0%
TGCGTTGTAATCAAGAGAGA+GGG + chr8_3:38731848-38731867 None:intergenic 40.0%
TTGCGTTGTAATCAAGAGAG+AGG + chr8_3:38731849-38731868 None:intergenic 40.0%
! ACGCAAACACCAAACACTTT+TGG - chr8_3:38731863-38731882 Msa1287550:intron 40.0%
! CAAACACCAAACACTTTTGG+TGG - chr8_3:38731866-38731885 Msa1287550:intron 40.0%
!! CAAAGTCCACCAAAAGTGTT+TGG + chr8_3:38731875-38731894 None:intergenic 40.0%
GGCCCTGTTTGTAAAAGAAT+TGG + chr8_3:38732273-38732292 None:intergenic 40.0%
GGGCCGTTGTAAAATTCAAA+AGG - chr8_3:38732288-38732307 Msa1287550:CDS 40.0%
GGTGGTTGTTGGAAAAATGT+TGG - chr8_3:38732309-38732328 Msa1287550:CDS 40.0%
GAATGAAGACAATGGGACTT+AGG + chr8_3:38732763-38732782 None:intergenic 40.0%
AAACCCAACCAAGTCTAAGA+AGG - chr8_3:38732839-38732858 Msa1287550:intron 40.0%
AGGGGGAGAAATACAAGATA+GGG + chr8_3:38732943-38732962 None:intergenic 40.0%
AAGGGGGAGAAATACAAGAT+AGG + chr8_3:38732944-38732963 None:intergenic 40.0%
CTATCTATGGCCATGGTAAA+AGG + chr8_3:38733793-38733812 None:intergenic 40.0%
CACAAGGACCCAAAGAAAAA+TGG + chr8_3:38733987-38734006 None:intergenic 40.0%
! CATTTTTCTTTGGGTCCTTG+TGG - chr8_3:38733985-38734004 Msa1287550:intron 40.0%
GCAAAGAAGAACAACCACAA+AGG + chr8_3:38734810-38734829 None:intergenic 40.0%
TGTGGTTGTTCTTCTTTGCA+AGG - chr8_3:38734811-38734830 Msa1287550:intron 40.0%
! GAGATGTTTAGAATGCAACC+AGG + chr8_3:38735329-38735348 None:intergenic 40.0%
!! TTGAGAGAGGGTATTCAATC+TGG - chr8_3:38735355-38735374 Msa1287550:intron 40.0%
GGAAAGAACACATGAAGGAA+CGG + chr8_3:38735396-38735415 None:intergenic 40.0%
CAAAACGGCCAAAGAAATCT+GGG + chr8_3:38735426-38735445 None:intergenic 40.0%
TCATCATCCCATGATGTTTG+TGG - chr8_3:38735536-38735555 Msa1287550:intron 40.0%
ACACCATTCACAGTTGTAGT+GGG - chr8_3:38735572-38735591 Msa1287550:intron 40.0%
! ACAGTTGTAGTGGGAACATA+AGG - chr8_3:38735581-38735600 Msa1287550:intron 40.0%
CATCCCAAATTTCTTCACCT+TGG - chr8_3:38735618-38735637 Msa1287550:intron 40.0%
AGCCCAAGGTGAAGAAATTT+GGG + chr8_3:38735624-38735643 None:intergenic 40.0%
AAGCCCAAGGTGAAGAAATT+TGG + chr8_3:38735625-38735644 None:intergenic 40.0%
CCGGAGATCATTATGATTTC+TGG + chr8_3:38735673-38735692 None:intergenic 40.0%
TAATGATCTCCGGTGAAACA+TGG - chr8_3:38735680-38735699 Msa1287550:intron 40.0%
!! GATTTAGCGGAAGCCATTTT+CGG - chr8_3:38735737-38735756 Msa1287550:intron 40.0%
!! ATTTAGCGGAAGCCATTTTC+GGG - chr8_3:38735738-38735757 Msa1287550:intron 40.0%
CAGATTATAACCTAAGAGGG+GGG - chr8_3:38735811-38735830 Msa1287550:intron 40.0%
AGATTATAACCTAAGAGGGG+GGG - chr8_3:38735812-38735831 Msa1287550:intron 40.0%
AACATAGTGAATTCCTTCGC+GGG + chr8_3:38731753-38731772 None:intergenic 40.0%
AAAGATTGTTAGGGGGTCTT+GGG + chr8_3:38731802-38731821 None:intergenic 40.0%
! ACGCAAACACCAAACACTTT+TGG - chr8_3:38731863-38731882 Msa1287550:intron 40.0%
! CAAACACCAAACACTTTTGG+TGG - chr8_3:38731866-38731885 Msa1287550:intron 40.0%
!! CAAAGTCCACCAAAAGTGTT+TGG + chr8_3:38731875-38731894 None:intergenic 40.0%
GGCCCTGTTTGTAAAAGAAT+TGG + chr8_3:38732273-38732292 None:intergenic 40.0%
GGGCCGTTGTAAAATTCAAA+AGG - chr8_3:38732288-38732307 Msa1287550:CDS 40.0%
GAATGAAGACAATGGGACTT+AGG + chr8_3:38732763-38732782 None:intergenic 40.0%
AAACCCAACCAAGTCTAAGA+AGG - chr8_3:38732839-38732858 Msa1287550:intron 40.0%
ACACGTCATCTTCAGAATCA+GGG + chr8_3:38737142-38737161 None:intergenic 40.0%
AACACGTCATCTTCAGAATC+AGG + chr8_3:38737143-38737162 None:intergenic 40.0%
TTCTTATGTGTTAGATGGGG+CGG - chr8_3:38737303-38737322 Msa1287550:intron 40.0%
!! GTGTTGGTTGAATCTCCTAA+TGG - chr8_3:38737361-38737380 Msa1287550:intron 40.0%
! TGAAAGATGTCGGTTGTTCA+CGG - chr8_3:38737711-38737730 Msa1287550:intron 40.0%
TTCATATTGACGCAACCGAT+TGG - chr8_3:38737785-38737804 Msa1287550:intron 40.0%
TCATATTGACGCAACCGATT+GGG - chr8_3:38737786-38737805 Msa1287550:intron 40.0%
TGCTACAAAAAGAGCCCAAT+CGG + chr8_3:38737803-38737822 None:intergenic 40.0%
! GGGCTCTTTTTGTAGCATAT+AGG - chr8_3:38737806-38737825 Msa1287550:intron 40.0%
CGCGAAAAAATGCAGCAAAT+AGG - chr8_3:38737854-38737873 Msa1287550:intron 40.0%
TAGGAAGAAAGTCTCTTGCA+AGG - chr8_3:38737902-38737921 Msa1287550:intron 40.0%
TGCAAGGAAGAAAGATGAGT+TGG - chr8_3:38737918-38737937 Msa1287550:intron 40.0%
GATGGTCGAGAATATAGTAG+GGG - chr8_3:38738022-38738041 Msa1287550:intron 40.0%
GTTTCTCATAAGGACTCCAA+AGG - chr8_3:38738058-38738077 Msa1287550:intron 40.0%
AGGGCTATATGTCAATGAAG+AGG - chr8_3:38738078-38738097 Msa1287550:intron 40.0%
CTGCTGGTGTGTATATTGTT+TGG - chr8_3:38738323-38738342 Msa1287550:intron 40.0%
GTGTTTGGAAAAGAACATCC+TGG - chr8_3:38738590-38738609 Msa1287550:CDS 40.0%
TCCTGGATATGTTCGTTCTA+TGG - chr8_3:38738607-38738626 Msa1287550:CDS 40.0%
CCTGGATATGTTCGTTCTAT+GGG - chr8_3:38738608-38738627 Msa1287550:CDS 40.0%
TATGTTCGTTCTATGGGACT+TGG - chr8_3:38738614-38738633 Msa1287550:CDS 40.0%
ATGTTCGTTCTATGGGACTT+GGG - chr8_3:38738615-38738634 Msa1287550:CDS 40.0%
TAGAACGACATCTTCCTTTG+AGG - chr8_3:38738673-38738692 Msa1287550:CDS 40.0%
! CATCTTCTCATTAGCCTCAA+AGG + chr8_3:38738690-38738709 None:intergenic 40.0%
! AGCCGAAATCGATTCACTTA+AGG - chr8_3:38738721-38738740 Msa1287550:CDS 40.0%
CAAGTTGCATTCTTGTTGCT+TGG - chr8_3:38738838-38738857 Msa1287550:intron 40.0%
! GCATTCTTGTTGCTTGGATT+AGG - chr8_3:38738844-38738863 Msa1287550:intron 40.0%
! ACATCAGTTTAAGGTTGTCC+TGG - chr8_3:38738956-38738975 Msa1287550:intron 40.0%
GCAGTAACTTGAAACTCGTA+AGG - chr8_3:38739017-38739036 Msa1287550:intron 40.0%
TAGGGCTTCAAATTTGGATC+AGG - chr8_3:38739191-38739210 Msa1287550:intron 40.0%
!!! TTGAACGCCTCTAGTTTTAG+GGG - chr8_3:38739250-38739269 Msa1287550:intron 40.0%
! CTTGGTGATTCTGTGTTTGT+TGG + chr8_3:38739483-38739502 None:intergenic 40.0%
AACACAGAATCACCAAGAGA+TGG - chr8_3:38739486-38739505 Msa1287550:intron 40.0%
GATGTTGCTCATGATTCTCA+AGG + chr8_3:38739539-38739558 None:intergenic 40.0%
GAATCATGAGCAACATCACT+AGG - chr8_3:38739542-38739561 Msa1287550:intron 40.0%
! GCTTGCAGCGTAAGTGTTTT+TGG - chr8_3:38730570-38730589 Msa1287550:intron 45.0%
AGACGATTCGACAAGGGATT+GGG + chr8_3:38730699-38730718 None:intergenic 45.0%
AAGACGATTCGACAAGGGAT+TGG + chr8_3:38730700-38730719 None:intergenic 45.0%
CGTTCAAGGTTTGTACAACC+TGG - chr8_3:38731289-38731308 Msa1287550:CDS 45.0%
CTTGTGGTAAGTCATGCGAA+CGG + chr8_3:38731345-38731364 None:intergenic 45.0%
AGTGGATATGTCTCTTGGAC+TGG + chr8_3:38731406-38731425 None:intergenic 45.0%
GTTGTCACCTTGCTAGTTAG+TGG + chr8_3:38731424-38731443 None:intergenic 45.0%
ATGATTGTGTGATGTGGCCT+GGG + chr8_3:38731485-38731504 None:intergenic 45.0%
AATGATTGTGTGATGTGGCC+TGG + chr8_3:38731486-38731505 None:intergenic 45.0%
CAGATTATAACCTGAGAGGG+GGG - chr8_3:38731527-38731546 Msa1287550:intron 45.0%
AGATTATAACCTGAGAGGGG+GGG - chr8_3:38731528-38731547 Msa1287550:intron 45.0%
TGGTTCCCCTCTAAACCTTA+GGG - chr8_3:38731707-38731726 Msa1287550:intron 45.0%
ACTGACCCTAAGGTTTAGAG+GGG + chr8_3:38731715-38731734 None:intergenic 45.0%
GACTGACCCTAAGGTTTAGA+GGG + chr8_3:38731716-38731735 None:intergenic 45.0%
ACATAGTGAATTCCTTCGCG+GGG + chr8_3:38731752-38731771 None:intergenic 45.0%
AAGATTGTTAGGGGGTCTTG+GGG + chr8_3:38731801-38731820 None:intergenic 45.0%
GAAAGATTGTTAGGGGGTCT+TGG + chr8_3:38731803-38731822 None:intergenic 45.0%
GCAACGGCTATTATGTGCAA+CGG + chr8_3:38732335-38732354 None:intergenic 45.0%
GGGGAGAAATACAAGATAGG+GGG + chr8_3:38732941-38732960 None:intergenic 45.0%
GGGGGAGAAATACAAGATAG+GGG + chr8_3:38732942-38732961 None:intergenic 45.0%
!!! CTCCCCCTTTGTTTTGCAAT+TGG - chr8_3:38732955-38732974 Msa1287550:intron 45.0%
TCAAACAACAAATCCGGGCT+TGG + chr8_3:38734354-38734373 None:intergenic 45.0%
! GTTTTCCTCCCATGCAATGT+AGG - chr8_3:38734758-38734777 Msa1287550:intron 45.0%
AAGAAGGGCCTACATTGCAT+GGG + chr8_3:38734769-38734788 None:intergenic 45.0%
!! TGTCGTTGGCAGCACTTTTT+GGG + chr8_3:38735136-38735155 None:intergenic 45.0%
! ATGTCGTTGGCAGCACTTTT+TGG + chr8_3:38735137-38735156 None:intergenic 45.0%
GATTCTCAGGTCACTGTCAA+GGG + chr8_3:38735210-38735229 None:intergenic 45.0%
AGATTCTCAGGTCACTGTCA+AGG + chr8_3:38735211-38735230 None:intergenic 45.0%
! TTTTTCCAAGGGCTGCAAGA+TGG - chr8_3:38735258-38735277 Msa1287550:intron 45.0%
ACATCTCGTACTCTTGAGAG+AGG - chr8_3:38735342-38735361 Msa1287550:intron 45.0%
CATCTCGTACTCTTGAGAGA+GGG - chr8_3:38735343-38735362 Msa1287550:intron 45.0%
GCAAAACGGCCAAAGAAATC+TGG + chr8_3:38735427-38735446 None:intergenic 45.0%
AAACTCATCCATCCCAAGAG+AGG - chr8_3:38735463-38735482 Msa1287550:intron 45.0%
TCTTCAATCCTCTCTTGGGA+TGG + chr8_3:38735474-38735493 None:intergenic 45.0%
CACACCATTCACAGTTGTAG+TGG - chr8_3:38735571-38735590 Msa1287550:intron 45.0%
GTTCCCACTACAACTGTGAA+TGG + chr8_3:38735578-38735597 None:intergenic 45.0%
TGGGAACATAAGGACCATTC+TGG - chr8_3:38735591-38735610 Msa1287550:intron 45.0%
! ATTTGGGATGCTGTCCAGAA+TGG + chr8_3:38735608-38735627 None:intergenic 45.0%
ACAACGTATCTAGAAGCCCA+AGG + chr8_3:38735638-38735657 None:intergenic 45.0%
!! CATGGTGGTCGGTTTGAATT+AGG - chr8_3:38735698-38735717 Msa1287550:intron 45.0%
TGGTTCCCCTCTAAACCTTA+GGG - chr8_3:38731707-38731726 Msa1287550:intron 45.0%
ACTGACCCTAAGGTTTAGAG+GGG + chr8_3:38731715-38731734 None:intergenic 45.0%
GACTGACCCTAAGGTTTAGA+GGG + chr8_3:38731716-38731735 None:intergenic 45.0%
ACATAGTGAATTCCTTCGCG+GGG + chr8_3:38731752-38731771 None:intergenic 45.0%
AAGATTGTTAGGGGGTCTTG+GGG + chr8_3:38731801-38731820 None:intergenic 45.0%
GAAAGATTGTTAGGGGGTCT+TGG + chr8_3:38731803-38731822 None:intergenic 45.0%
GCAACGGCTATTATGTGCAA+CGG + chr8_3:38732335-38732354 None:intergenic 45.0%
TTCTTCAACTTGAGCCTCCA+TGG - chr8_3:38737041-38737060 Msa1287550:intron 45.0%
TCTTATGTGTTAGATGGGGC+GGG - chr8_3:38737304-38737323 Msa1287550:intron 45.0%
TCGGTTGCGTCAATATGAAG+TGG + chr8_3:38737784-38737803 None:intergenic 45.0%
CTAACGACCCATCATACACT+AGG - chr8_3:38737883-38737902 Msa1287550:intron 45.0%
AAGAGCCCTGGATAATATGC+AGG - chr8_3:38738514-38738533 Msa1287550:intron 45.0%
CCCATAGAACGAACATATCC+AGG + chr8_3:38738611-38738630 None:intergenic 45.0%
AGGAAGATGTCGTTCTAGCA+CGG + chr8_3:38738670-38738689 None:intergenic 45.0%
!! GTTTTAGGTAAGGGTGTGCA+TGG - chr8_3:38738874-38738893 Msa1287550:intron 45.0%
CAATGATTCCACACAACACC+AGG + chr8_3:38738977-38738996 None:intergenic 45.0%
TAACCAGCCCCTAAAACTAG+AGG + chr8_3:38739260-38739279 None:intergenic 45.0%
!!! TCTAGTTTTAGGGGCTGGTT+AGG - chr8_3:38739259-38739278 Msa1287550:intron 45.0%
GTTGCTCATGATTCTCAAGG+CGG + chr8_3:38739536-38739555 None:intergenic 45.0%
!!! TTGAATTTTAAAAATAAATT+TGG + chr8_3:38733441-38733460 None:intergenic 5.0%
!! TAAATTATTTAAAGATAATT+TGG + chr8_3:38737243-38737262 None:intergenic 5.0%
ACAAGGGATTGGGCGAGAAT+TGG + chr8_3:38730689-38730708 None:intergenic 50.0%
GGCAGAAGACGATTCGACAA+GGG + chr8_3:38730705-38730724 None:intergenic 50.0%
TGGCAGAAGACGATTCGACA+AGG + chr8_3:38730706-38730725 None:intergenic 50.0%
AGTCTGTGAAGGGTCGTTCA+AGG - chr8_3:38731275-38731294 Msa1287550:CDS 50.0%
TGTACAACCTGGAGCTCTTG+AGG - chr8_3:38731300-38731319 Msa1287550:CDS 50.0%
!! TATGTCTCTTGGACTGGTGC+AGG + chr8_3:38731400-38731419 None:intergenic 50.0%
TCAGTCACCTCGACTATTGC+CGG + chr8_3:38731451-38731470 None:intergenic 50.0%
GATTATAACCTGAGAGGGGG+GGG - chr8_3:38731529-38731548 Msa1287550:intron 50.0%
ATTATAACCTGAGAGGGGGG+GGG - chr8_3:38731530-38731549 Msa1287550:intron 50.0%
GGGGGGTGAATTAGGTTTCT+AGG - chr8_3:38731562-38731581 Msa1287550:intron 50.0%
GTGGTTCCCCTCTAAACCTT+AGG - chr8_3:38731706-38731725 Msa1287550:intron 50.0%
GGACTGACCCTAAGGTTTAG+AGG + chr8_3:38731717-38731736 None:intergenic 50.0%
! TTCTTCGACTTGAGCCTCCA+TGG - chr8_3:38732780-38732799 Msa1287550:intron 50.0%
CAAGAAGGGCCTACATTGCA+TGG + chr8_3:38734770-38734789 None:intergenic 50.0%
CATGCAATGTAGGCCCTTCT+TGG - chr8_3:38734768-38734787 Msa1287550:intron 50.0%
TCAGGTCACTGTCAAGGGAA+TGG + chr8_3:38735205-38735224 None:intergenic 50.0%
ATCAACCATCTTGCAGCCCT+TGG + chr8_3:38735266-38735285 None:intergenic 50.0%
TGATCTCCGGTGAAACATGG+TGG - chr8_3:38735683-38735702 Msa1287550:intron 50.0%
AACCGACCACCATGTTTCAC+CGG + chr8_3:38735692-38735711 None:intergenic 50.0%
GGGGGGTGAATTAGGTTTCT+AGG - chr8_3:38731562-38731581 Msa1287550:intron 50.0%
GTGGTTCCCCTCTAAACCTT+AGG - chr8_3:38731706-38731725 Msa1287550:intron 50.0%
GGACTGACCCTAAGGTTTAG+AGG + chr8_3:38731717-38731736 None:intergenic 50.0%
GAAGCCAGACACGCAAAAGA+AGG - chr8_3:38737831-38737850 Msa1287550:intron 50.0%
!! AAGGTTGTCCTGGTGTTGTG+TGG - chr8_3:38738966-38738985 Msa1287550:intron 50.0%
!! ACTTCTTTGGAGCTCGACCT+TGG - chr8_3:38739294-38739313 Msa1287550:intron 50.0%
CTCAAGGCGGTAACTAGACT+CGG + chr8_3:38739523-38739542 None:intergenic 50.0%
TTTGCTGCCTCAAGAGCTCC+AGG + chr8_3:38731310-38731329 None:intergenic 55.0%
GTGGTAAGTCATGCGAACGG+AGG + chr8_3:38731342-38731361 None:intergenic 55.0%
!! TCACTGGTGTAGGTGGTGGA+GGG + chr8_3:38731369-38731388 None:intergenic 55.0%
TAGCAAGGTGACAACACCGC+CGG - chr8_3:38731429-38731448 Msa1287550:CDS 55.0%
GACTGAACTGCCATCTTCCC+AGG - chr8_3:38731465-38731484 Msa1287550:CDS 55.0%
TGTGATGTGGCCTGGGAAGA+TGG + chr8_3:38731478-38731497 None:intergenic 55.0%
TTATAACCTGAGAGGGGGGG+GGG - chr8_3:38731531-38731550 Msa1287550:intron 55.0%
!! AAGGGAGTGGACTGACCCTA+AGG + chr8_3:38731725-38731744 None:intergenic 55.0%
ATTCCTTCGCGGGGTGTGAA+GGG + chr8_3:38731743-38731762 None:intergenic 55.0%
AATTCCTTCGCGGGGTGTGA+AGG + chr8_3:38731744-38731763 None:intergenic 55.0%
AAGGGCCTACATTGCATGGG+AGG + chr8_3:38734766-38734785 None:intergenic 55.0%
! AGCATTGGACTCCGCCTTCA+AGG - chr8_3:38735034-38735053 Msa1287550:intron 55.0%
CTCCGGTGAAACATGGTGGT+CGG - chr8_3:38735687-38735706 Msa1287550:intron 55.0%
CCTAATTCACCCCCCCTCTT+AGG + chr8_3:38735824-38735843 None:intergenic 55.0%
CCTAAGAGGGGGGGTGAATT+AGG - chr8_3:38735821-38735840 Msa1287550:intron 55.0%
!! AAGGGAGTGGACTGACCCTA+AGG + chr8_3:38731725-38731744 None:intergenic 55.0%
ATTCCTTCGCGGGGTGTGAA+GGG + chr8_3:38731743-38731762 None:intergenic 55.0%
AATTCCTTCGCGGGGTGTGA+AGG + chr8_3:38731744-38731763 None:intergenic 55.0%
ATGGAAGGGTCGTCAACCAG+TGG - chr8_3:38737402-38737421 Msa1287550:intron 55.0%
TGGAAGGGTCGTCAACCAGT+GGG - chr8_3:38737403-38737422 Msa1287550:intron 55.0%
AAACCAGCTGCTTCTCCCAC+TGG + chr8_3:38737421-38737440 None:intergenic 55.0%
!!! ACGCCTCTAGTTTTAGGGGC+TGG - chr8_3:38739254-38739273 Msa1287550:intron 55.0%
AAGGCGGTAACTAGACTCGG+AGG + chr8_3:38739520-38739539 None:intergenic 55.0%
!! CACTGGTGTAGGTGGTGGAG+GGG + chr8_3:38731368-38731387 None:intergenic 60.0%
! GTCACTGGTGTAGGTGGTGG+AGG + chr8_3:38731370-38731389 None:intergenic 60.0%
!! GGTGTCACTGGTGTAGGTGG+TGG + chr8_3:38731373-38731392 None:intergenic 60.0%
!! GGTGGTGTCACTGGTGTAGG+TGG + chr8_3:38731376-38731395 None:intergenic 60.0%
!! GGTGGTGGTGTCACTGGTGT+AGG + chr8_3:38731379-38731398 None:intergenic 60.0%
!! TCTTGGACTGGTGCAGGTGG+TGG + chr8_3:38731394-38731413 None:intergenic 60.0%
!! GTCTCTTGGACTGGTGCAGG+TGG + chr8_3:38731397-38731416 None:intergenic 60.0%
AACACCGCCGGCAATAGTCG+AGG - chr8_3:38731441-38731460 Msa1287550:CDS 60.0%
GTCACCTCGACTATTGCCGG+CGG + chr8_3:38731448-38731467 None:intergenic 60.0%
TATAACCTGAGAGGGGGGGG+GGG - chr8_3:38731532-38731551 Msa1287550:intron 60.0%
CAACCAGTGGGAGAAGCAGC+TGG - chr8_3:38737415-38737434 Msa1287550:intron 60.0%
! CGCGCCTTCTTTTGCGTGTC+TGG + chr8_3:38737838-38737857 None:intergenic 60.0%
! GAGGAGCGCACACCATCTCT+TGG + chr8_3:38739501-38739520 None:intergenic 60.0%
!! GTAGGTGGTGGAGGGGCTTG+TGG + chr8_3:38731361-38731380 None:intergenic 65.0%
!! GGTGCAGGTGGTGGTGTCAC+TGG + chr8_3:38731385-38731404 None:intergenic 65.0%
ATAACCTGAGAGGGGGGGGG+GGG - chr8_3:38731533-38731552 Msa1287550:intron 65.0%
TTCGCGGGGTGTGAAGGGAG+TGG + chr8_3:38731738-38731757 None:intergenic 65.0%
ACTCCCTTCACACCCCGCGA+AGG - chr8_3:38731737-38731756 Msa1287550:intron 65.0%
TTCGCGGGGTGTGAAGGGAG+TGG + chr8_3:38731738-38731757 None:intergenic 65.0%
ACTCCCTTCACACCCCGCGA+AGG - chr8_3:38731737-38731756 Msa1287550:intron 65.0%
TAACCTGAGAGGGGGGGGGG+GGG - chr8_3:38731534-38731553 Msa1287550:intron 70.0%
AACCTGAGAGGGGGGGGGGG+GGG - chr8_3:38731535-38731554 Msa1287550:intron 75.0%
GGGGGGGGGGGGGGTGAATT+AGG - chr8_3:38731554-38731573 Msa1287550:intron 75.0%
! ACCTGAGAGGGGGGGGGGGG+GGG - chr8_3:38731536-38731555 Msa1287550:intron 80.0%
! CCTGAGAGGGGGGGGGGGGG+GGG - chr8_3:38731537-38731556 Msa1287550:intron 85.0%
! CTGAGAGGGGGGGGGGGGGG+GGG - chr8_3:38731538-38731557 Msa1287550:intron 85.0%
! TGAGAGGGGGGGGGGGGGGG+GGG - chr8_3:38731539-38731558 Msa1287550:intron 85.0%
! CCCCCCCCCCCCCCCCTCTC+AGG + chr8_3:38731540-38731559 None:intergenic 90.0%
! GAGAGGGGGGGGGGGGGGGG+GGG - chr8_3:38731540-38731559 Msa1287550:intron 90.0%
! AGAGGGGGGGGGGGGGGGGG+GGG - chr8_3:38731541-38731560 Msa1287550:intron 90.0%
! GAGGGGGGGGGGGGGGGGGG+GGG - chr8_3:38731542-38731561 Msa1287550:intron 95.0%
! AGGGGGGGGGGGGGGGGGGG+GGG - chr8_3:38731543-38731562 Msa1287550:intron 95.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 38730223 38739815 38730223 ID=Msa1287550;Name=Msa1287550
chr8_3 mRNA 38730223 38739815 38730223 ID=Msa1287550-mRNA-1;Parent=Msa1287550;Name=Msa1287550-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.62|0.55|0.88|0.62|0.66|9|252|426
chr8_3 exon 38730223 38730558 38730223 ID=Msa1287550-mRNA-1:exon:10903;Parent=Msa1287550-mRNA-1
chr8_3 exon 38731218 38731502 38731218 ID=Msa1287550-mRNA-1:exon:10902;Parent=Msa1287550-mRNA-1
chr8_3 exon 38731924 38732025 38731924 ID=Msa1287550-mRNA-1:exon:10901;Parent=Msa1287550-mRNA-1
chr8_3 exon 38732099 38732398 38732099 ID=Msa1287550-mRNA-1:exon:10900;Parent=Msa1287550-mRNA-1
chr8_3 exon 38732480 38732629 38732480 ID=Msa1287550-mRNA-1:exon:10899;Parent=Msa1287550-mRNA-1
chr8_3 exon 38732713 38732721 38732713 ID=Msa1287550-mRNA-1:exon:10898;Parent=Msa1287550-mRNA-1
chr8_3 exon 38738576 38738752 38738576 ID=Msa1287550-mRNA-1:exon:10897;Parent=Msa1287550-mRNA-1
chr8_3 exon 38739296 38739460 38739296 ID=Msa1287550-mRNA-1:exon:10896;Parent=Msa1287550-mRNA-1
chr8_3 exon 38739807 38739815 38739807 ID=Msa1287550-mRNA-1:exon:10895;Parent=Msa1287550-mRNA-1
chr8_3 CDS 38739807 38739815 38739807 ID=Msa1287550-mRNA-1:cds;Parent=Msa1287550-mRNA-1
chr8_3 CDS 38739296 38739460 38739296 ID=Msa1287550-mRNA-1:cds;Parent=Msa1287550-mRNA-1
chr8_3 CDS 38738576 38738752 38738576 ID=Msa1287550-mRNA-1:cds;Parent=Msa1287550-mRNA-1
chr8_3 CDS 38732713 38732721 38732713 ID=Msa1287550-mRNA-1:cds;Parent=Msa1287550-mRNA-1
chr8_3 CDS 38732480 38732629 38732480 ID=Msa1287550-mRNA-1:cds;Parent=Msa1287550-mRNA-1
chr8_3 CDS 38732099 38732398 38732099 ID=Msa1287550-mRNA-1:cds;Parent=Msa1287550-mRNA-1
chr8_3 CDS 38731924 38732025 38731924 ID=Msa1287550-mRNA-1:cds;Parent=Msa1287550-mRNA-1
chr8_3 CDS 38731218 38731502 38731218 ID=Msa1287550-mRNA-1:cds;Parent=Msa1287550-mRNA-1
chr8_3 CDS 38730475 38730558 38730475 ID=Msa1287550-mRNA-1:cds;Parent=Msa1287550-mRNA-1
chr8_3 three_prime_UTR 38730223 38730474 38730223 ID=Msa1287550-mRNA-1:three_prime_utr;Parent=Msa1287550-mRNA-1
Gene Sequence

>Msa1287550

ATGACTCTACGTAAGTGTTTTTGGAGTCTCAACCTTGTGAAAAAGATGACACCATATGAATATGCGCGGTACAAAAATATTGAAGTTATTAATAAAAAGATTCACGCTCTCAATCTGCCAATTCTCGCCCAATCCCTTGTCGAATCGTCTTCTGCCACTAAAAAACCTTCATCGGGTCGTTCAAGGTTTGTACAACCTGGAGCTCTTGAGGCAGCAAACAAGAAGCGCCTCCGTTCGCATGACTTACCACAAGCCCCTCCACCACCTACACCAGTGACACCACCACCTGCACCAGTCCAAGAGACATATCCACTAACTAGCAAGGTGACAACACCGCCGGCAATAGTCGAGATGGGGCGGGGTCGTCAACCAGTGGGAGAAGCAGCTGGTTTTTTAGCGAGTTTTTTGGGTAACCTTGCTAGAATGTATAGAGACTTTCCGATAATGTTTGAAAGTTGGGACAAAATTCCAGAGAAAACAAAAACTAAAGTTTATGATGAAAAAATAAAGACAAAATTTGTTGTTGATGATGGAGACAACAAAAGCTATATTTTGACAAGTATTGGAAGGAAATGGAAGGATGAAAGATGTCGGTTGTTCACGGAACATTATAAATGGGATCTCCCATTAGAAGTGAATCTTGCGAATTATCCACTTCATATTGACGCAACCGATTGGGCTCTTTTTGTAGCATATAGGCGGAAGCCAGACACGCAAAAGAAGGCGCGAAAAAATGCAGCAAATAGGAAAAAACTAACGACCCATCATACACTAGGAAGAAAGTCTCTTGCAAGGAAGAAAGATGAGTTGGAAGTGAAAGATGGTCGAGAATATAGTAGGGGAGAAATGTTTTCAGTTTCTCATAAGGACTCCAAAGGGCTATATGTCAATGAAGAGGTCAAGAAAAAAGCTGAACAATTGCAAATTGAAATGCAAAACACTCCTGAGAATGAAGCATTTGTCAAAGTGTTTGGAAAAGAACATCCTGGATATGTTCGTTCTATGGGACTTGGGATAACACCATCTCAAATCTCTACTTCTCACCGTGCTAGAACGACATCTTCCTTTGAGGCTAATGAGAAGATGTTGAAAATGCAAGCCGAAATCGATTCACTTAAGGATAAGGCTTCACAAGTTGATATCTTGAAGGAACAAGCGGCATTCTTGATGCAAATGCAGAATTCTAGAGAAAAACAGCCAACAAACACAGAATCACCAAGAGATGGTGTGCGCTCCTCCGAGTCTAGTTACCGCCTTGAGAATCATGAGCAACATCACTAG

Protein sequence

>Msa1287550

MTLRKCFWSLNLVKKMTPYEYARYKNIEVINKKIHALNLPILAQSLVESSSATKKPSSGRSRFVQPGALEAANKKRLRSHDLPQAPPPPTPVTPPPAPVQETYPLTSKVTTPPAIVEMGRGRQPVGEAAGFLASFLGNLARMYRDFPIMFESWDKIPEKTKTKVYDEKIKTKFVVDDGDNKSYILTSIGRKWKDERCRLFTEHYKWDLPLEVNLANYPLHIDATDWALFVAYRRKPDTQKKARKNAANRKKLTTHHTLGRKSLARKKDELEVKDGREYSRGEMFSVSHKDSKGLYVNEEVKKKAEQLQIEMQNTPENEAFVKVFGKEHPGYVRSMGLGITPSQISTSHRARTTSSFEANEKMLKMQAEIDSLKDKASQVDILKEQAAFLMQMQNSREKQPTNTESPRDGVRSSESSYRLENHEQHH*