Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393590 | XP_024636023.1 | 68.317 | 303 | 77 | 7 | 1 | 292 | 72 | 366 | 2.84e-126 | 375 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393590 | G7IVK1 | 68.317 | 303 | 77 | 7 | 1 | 292 | 72 | 366 | 3.11e-126 | 376 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0084440 | Msa0393590 | 0.873596 | 1.300764e-67 | -8.615850e-47 |
| Msa0113060 | Msa0393590 | 0.801469 | 8.873425e-49 | -8.615850e-47 |
| Msa0392140 | Msa0393590 | 0.850619 | 1.510669e-60 | -8.615850e-47 |
| Msa0393570 | Msa0393590 | 0.858675 | 6.998559e-63 | -8.615850e-47 |
| Msa0393590 | Msa0487830 | 0.818588 | 1.812082e-52 | -8.615850e-47 |
| Msa0393590 | Msa0737340 | 0.849595 | 2.922693e-60 | -8.615850e-47 |
| Msa0393590 | Msa0890270 | 0.824551 | 7.590792e-54 | -8.615850e-47 |
| Msa0393590 | Msa0942260 | 0.828669 | 7.905304e-55 | -8.615850e-47 |
| Msa0393590 | Msa1012290 | 0.831371 | 1.733852e-55 | -8.615850e-47 |
| Msa0393590 | Msa1287550 | 0.801816 | 7.530653e-49 | -8.615850e-47 |
| Msa0319860 | Msa0393590 | 0.834491 | 2.907269e-56 | -8.615850e-47 |
| Msa0353620 | Msa0393590 | 0.810928 | 9.033539e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393590 | MtrunA17_Chr3g0078891 | 68.317 | 303 | 77 | 7 | 1 | 292 | 72 | 366 | 5.99e-130 | 376 |
| Msa0393590 | MtrunA17_Chr3g0078731 | 67.752 | 307 | 76 | 8 | 1 | 292 | 72 | 370 | 2.13e-129 | 373 |
| Msa0393590 | MtrunA17_Chr3g0078681 | 69.355 | 248 | 57 | 7 | 1 | 237 | 86 | 325 | 3.17e-103 | 305 |
| Msa0393590 | MtrunA17_Chr8g0364381 | 59.016 | 305 | 100 | 10 | 1 | 292 | 129 | 421 | 6.05e-98 | 295 |
| Msa0393590 | MtrunA17_Chr3g0077781 | 52.980 | 302 | 112 | 10 | 2 | 292 | 79 | 361 | 3.28e-85 | 261 |
| Msa0393590 | MtrunA17_Chr2g0331741 | 49.664 | 298 | 127 | 9 | 3 | 292 | 143 | 425 | 6.70e-71 | 226 |
| Msa0393590 | MtrunA17_Chr3g0078191 | 47.712 | 306 | 137 | 9 | 2 | 299 | 110 | 400 | 7.05e-67 | 214 |
| Msa0393590 | MtrunA17_Chr2g0325081 | 46.000 | 300 | 138 | 10 | 2 | 292 | 76 | 360 | 1.28e-61 | 200 |
| Msa0393590 | MtrunA17_Chr4g0070811 | 47.826 | 276 | 120 | 10 | 25 | 292 | 5 | 264 | 2.87e-61 | 196 |
| Msa0393590 | MtrunA17_Chr3g0077791 | 52.107 | 261 | 98 | 8 | 2 | 250 | 79 | 324 | 1.18e-57 | 188 |
| Msa0393590 | MtrunA17_Chr3g0085901 | 41.667 | 300 | 133 | 11 | 2 | 292 | 74 | 340 | 3.87e-49 | 167 |
| Msa0393590 | MtrunA17_Chr5g0427711 | 40.667 | 300 | 148 | 10 | 2 | 292 | 66 | 344 | 2.31e-46 | 160 |
| Msa0393590 | MtrunA17_Chr2g0331731 | 48.876 | 178 | 76 | 5 | 120 | 292 | 1 | 168 | 1.03e-40 | 140 |
| Msa0393590 | MtrunA17_Chr6g0486911 | 35.088 | 342 | 144 | 12 | 2 | 292 | 86 | 400 | 9.85e-39 | 141 |
| Msa0393590 | MtrunA17_Chr7g0221741 | 37.748 | 302 | 155 | 11 | 2 | 292 | 71 | 350 | 1.71e-38 | 139 |
| Msa0393590 | MtrunA17_Chr7g0221701 | 37.793 | 299 | 146 | 11 | 2 | 292 | 44 | 310 | 2.79e-38 | 137 |
| Msa0393590 | MtrunA17_Chr7g0249591 | 37.171 | 304 | 151 | 12 | 2 | 292 | 77 | 353 | 8.24e-38 | 139 |
| Msa0393590 | MtrunA17_Chr5g0424761 | 35.667 | 300 | 157 | 12 | 2 | 292 | 81 | 353 | 3.76e-37 | 135 |
| Msa0393590 | MtrunA17_Chr6g0457681 | 35.669 | 314 | 146 | 11 | 3 | 292 | 118 | 399 | 4.01e-37 | 137 |
| Msa0393590 | MtrunA17_Chr3g0132661 | 34.431 | 334 | 152 | 11 | 2 | 292 | 88 | 397 | 9.01e-37 | 135 |
| Msa0393590 | MtrunA17_Chr3g0082431 | 36.964 | 303 | 148 | 11 | 3 | 292 | 74 | 346 | 1.94e-36 | 134 |
| Msa0393590 | MtrunA17_Chr3g0085941 | 37.582 | 306 | 156 | 12 | 1 | 296 | 77 | 357 | 2.84e-36 | 133 |
| Msa0393590 | MtrunA17_Chr3g0082451 | 36.964 | 303 | 147 | 11 | 3 | 292 | 74 | 345 | 1.54e-35 | 132 |
| Msa0393590 | MtrunA17_Chr3g0091201 | 39.382 | 259 | 120 | 10 | 2 | 250 | 92 | 323 | 2.90e-33 | 124 |
| Msa0393590 | MtrunA17_Chr5g0434961 | 57.265 | 117 | 42 | 4 | 1 | 114 | 1 | 112 | 6.39e-33 | 117 |
| Msa0393590 | MtrunA17_Chr8g0366411 | 34.848 | 330 | 151 | 14 | 2 | 292 | 142 | 446 | 1.59e-32 | 125 |
| Msa0393590 | MtrunA17_Chr3g0085961 | 33.333 | 327 | 158 | 10 | 2 | 292 | 77 | 379 | 1.73e-32 | 124 |
| Msa0393590 | MtrunA17_Chr6g0486921 | 33.611 | 360 | 146 | 16 | 2 | 292 | 83 | 418 | 1.04e-31 | 122 |
| Msa0393590 | MtrunA17_Chr4g0049031 | 35.168 | 327 | 147 | 15 | 2 | 292 | 91 | 388 | 1.62e-30 | 120 |
| Msa0393590 | MtrunA17_Chr3g0084261 | 35.135 | 333 | 144 | 14 | 1 | 292 | 87 | 388 | 6.64e-30 | 117 |
| Msa0393590 | MtrunA17_Chr3g0085951 | 35.736 | 333 | 145 | 14 | 3 | 292 | 66 | 372 | 1.13e-29 | 117 |
| Msa0393590 | MtrunA17_Chr7g0252201 | 39.815 | 216 | 103 | 10 | 2 | 211 | 79 | 273 | 1.23e-28 | 111 |
| Msa0393590 | MtrunA17_Chr6g0460081 | 36.078 | 255 | 121 | 11 | 48 | 292 | 150 | 372 | 1.99e-28 | 112 |
| Msa0393590 | MtrunA17_Chr4g0005311 | 34.139 | 331 | 149 | 12 | 2 | 289 | 88 | 392 | 3.42e-28 | 112 |
| Msa0393590 | MtrunA17_Chr3g0084251 | 33.841 | 328 | 160 | 13 | 2 | 292 | 259 | 566 | 4.67e-28 | 114 |
| Msa0393590 | MtrunA17_Chr3g0084251 | 42.675 | 157 | 77 | 7 | 2 | 153 | 88 | 236 | 1.07e-14 | 74.7 |
| Msa0393590 | MtrunA17_Chr4g0049111 | 34.266 | 286 | 138 | 14 | 2 | 269 | 105 | 358 | 6.97e-28 | 112 |
| Msa0393590 | MtrunA17_Chr4g0049531 | 33.117 | 308 | 158 | 14 | 2 | 290 | 20 | 298 | 9.88e-28 | 110 |
| Msa0393590 | MtrunA17_Chr3g0084241 | 35.000 | 320 | 155 | 12 | 2 | 292 | 70 | 365 | 5.96e-27 | 108 |
| Msa0393590 | MtrunA17_Chr5g0419301 | 30.994 | 342 | 156 | 15 | 2 | 292 | 92 | 404 | 9.44e-27 | 108 |
| Msa0393590 | MtrunA17_Chr4g0049121 | 32.370 | 346 | 162 | 13 | 2 | 292 | 94 | 422 | 1.10e-26 | 109 |
| Msa0393590 | MtrunA17_Chr6g0457621 | 35.950 | 242 | 115 | 10 | 59 | 292 | 163 | 372 | 1.52e-26 | 107 |
| Msa0393590 | MtrunA17_Chr4g0049041 | 31.487 | 343 | 157 | 15 | 2 | 290 | 87 | 405 | 3.05e-25 | 104 |
| Msa0393590 | MtrunA17_Chr6g0457641 | 35.341 | 249 | 132 | 9 | 6 | 250 | 118 | 341 | 8.34e-25 | 102 |
| Msa0393590 | MtrunA17_Chr5g0404531 | 39.462 | 223 | 95 | 13 | 56 | 272 | 2 | 190 | 8.36e-25 | 99.0 |
| Msa0393590 | MtrunA17_Chr3g0099441 | 29.716 | 387 | 143 | 19 | 2 | 292 | 90 | 443 | 2.44e-23 | 99.8 |
| Msa0393590 | MtrunA17_Chr4g0048151 | 29.565 | 345 | 159 | 14 | 2 | 292 | 92 | 406 | 2.55e-22 | 96.7 |
| Msa0393590 | MtrunA17_Chr5g0440681 | 30.357 | 336 | 129 | 15 | 2 | 291 | 88 | 364 | 6.72e-22 | 94.7 |
| Msa0393590 | MtrunA17_Chr6g0460041 | 37.143 | 210 | 104 | 9 | 6 | 211 | 107 | 292 | 9.19e-22 | 93.2 |
| Msa0393590 | MtrunA17_Chr4g0049071 | 30.178 | 338 | 164 | 14 | 2 | 292 | 112 | 424 | 1.16e-21 | 94.7 |
| Msa0393590 | MtrunA17_Chr5g0424701 | 35.323 | 201 | 104 | 8 | 2 | 199 | 80 | 257 | 2.50e-21 | 91.3 |
| Msa0393590 | MtrunA17_Chr7g0269551 | 42.636 | 129 | 54 | 6 | 86 | 214 | 4 | 112 | 1.28e-19 | 83.2 |
| Msa0393590 | MtrunA17_Chr3g0099431 | 35.359 | 181 | 91 | 6 | 72 | 250 | 1 | 157 | 1.86e-19 | 83.6 |
| Msa0393590 | MtrunA17_Chr3g0091161 | 33.453 | 278 | 146 | 12 | 3 | 269 | 76 | 325 | 6.10e-19 | 86.7 |
| Msa0393590 | MtrunA17_Chr3g0104731 | 33.846 | 195 | 104 | 7 | 2 | 190 | 82 | 257 | 3.52e-18 | 82.8 |
| Msa0393590 | MtrunA17_Chr3g0104721 | 34.171 | 199 | 99 | 8 | 2 | 189 | 91 | 268 | 8.02e-18 | 82.4 |
| Msa0393590 | MtrunA17_Chr4g0023631 | 30.952 | 336 | 160 | 16 | 2 | 296 | 78 | 382 | 8.93e-18 | 83.6 |
| Msa0393590 | MtrunA17_Chr8g0361351 | 29.618 | 314 | 173 | 13 | 2 | 292 | 74 | 362 | 2.35e-17 | 81.6 |
| Msa0393590 | MtrunA17_Chr3g0099461 | 27.841 | 352 | 159 | 15 | 2 | 292 | 90 | 407 | 2.52e-17 | 82.0 |
| Msa0393590 | MtrunA17_Chr1g0199541 | 32.323 | 198 | 101 | 9 | 2 | 190 | 88 | 261 | 2.19e-16 | 77.8 |
| Msa0393590 | MtrunA17_Chr8g0362531 | 28.013 | 307 | 189 | 10 | 2 | 292 | 104 | 394 | 4.45e-15 | 75.5 |
| Msa0393590 | MtrunA17_Chr4g0049091 | 30.370 | 270 | 137 | 13 | 21 | 269 | 12 | 251 | 1.46e-13 | 70.5 |
| Msa0393590 | MtrunA17_Chr4g0049051 | 33.333 | 144 | 76 | 6 | 105 | 248 | 3 | 126 | 1.67e-13 | 67.0 |
| Msa0393590 | MtrunA17_Chr6g0488401 | 37.324 | 142 | 76 | 5 | 2 | 135 | 72 | 208 | 2.67e-13 | 70.1 |
| Msa0393590 | MtrunA17_Chr4g0011401 | 28.125 | 320 | 189 | 12 | 1 | 299 | 205 | 504 | 2.76e-13 | 70.1 |
| Msa0393590 | MtrunA17_Chr3g0091331 | 38.065 | 155 | 72 | 6 | 98 | 249 | 15 | 148 | 1.27e-11 | 61.6 |
| Msa0393590 | MtrunA17_Chr4g0011321 | 37.405 | 131 | 77 | 4 | 20 | 150 | 89 | 214 | 4.38e-11 | 62.8 |
| Msa0393590 | MtrunA17_Chr4g0058061 | 28.244 | 262 | 148 | 11 | 1 | 253 | 216 | 446 | 6.14e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 65 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCGATTTCAAAATCGATTT+TGG | 0.091174 | 3_2:-7675653 | Msa0393590:CDS |
| ATTTGAATAGATTAAATATT+TGG | 0.098035 | 3_2:+7675486 | None:intergenic |
| AGGCGTATTCAATAATATTT+TGG | 0.164811 | 3_2:+7676074 | None:intergenic |
| AAGCAATAAGTCCACAATTT+TGG | 0.218541 | 3_2:+7675217 | None:intergenic |
| CATATGTATCGTTGTTTCTA+TGG | 0.225816 | 3_2:-7675701 | Msa0393590:CDS |
| AATTATATTCCAAAACTCTT+TGG | 0.231100 | 3_2:-7675581 | Msa0393590:CDS |
| GTCTTGCTCCCAAAGAGTTT+TGG | 0.282395 | 3_2:+7675572 | None:intergenic |
| TTAACGTCTCTCAGTCTTAC+TGG | 0.315677 | 3_2:-7675971 | Msa0393590:CDS |
| ATTATATTCCAAAACTCTTT+GGG | 0.317653 | 3_2:-7675580 | Msa0393590:CDS |
| TTTGAATAGATTAAATATTT+GGG | 0.345787 | 3_2:+7675487 | None:intergenic |
| TTTACACAATTACATGTGTT+TGG | 0.355436 | 3_2:-7675516 | Msa0393590:CDS |
| CAACATGTTAAATGTGGAAA+AGG | 0.367426 | 3_2:+7675811 | None:intergenic |
| TGCATGAAATGCGAAGGTTT+TGG | 0.377501 | 3_2:+7675747 | None:intergenic |
| CATTGACCGCTGTGTACTTA+GGG | 0.379554 | 3_2:-7675777 | Msa0393590:CDS |
| GATGTTGGGTTGCAGACTAT+TGG | 0.388699 | 3_2:-7674439 | Msa0393590:CDS |
| TCATTGACCGCTGTGTACTT+AGG | 0.395772 | 3_2:-7675778 | Msa0393590:CDS |
| AACATGTTAAATGTGGAAAA+GGG | 0.410583 | 3_2:+7675812 | None:intergenic |
| TAAAAGTCTGCAATGCTTTG+AGG | 0.413838 | 3_2:+7674404 | None:intergenic |
| TAGAAGCGCTCCGACCTTCA+TGG | 0.421609 | 3_2:-7675247 | Msa0393590:CDS |
| ACCATCATCGTTACAACAAA+AGG | 0.431285 | 3_2:+7675847 | None:intergenic |
| GGTATCAATCTAATGCTTCC+CGG | 0.434879 | 3_2:-7675950 | Msa0393590:CDS |
| ATTGGTGATTACAGGATGTT+GGG | 0.451283 | 3_2:-7674453 | Msa0393590:intron |
| AGAGAGAGAGTGGTTAATGC+TGG | 0.454587 | 3_2:+7675881 | None:intergenic |
| TCGGAGCGCTTCTATATTCA+AGG | 0.455494 | 3_2:+7675256 | None:intergenic |
| AGTGTGAGATGAAAAGAAAC+AGG | 0.463803 | 3_2:+7675994 | None:intergenic |
| TGGAAATATTTGATTCTCAC+CGG | 0.472931 | 3_2:+7675931 | None:intergenic |
| TTTGAAATCGGCTTTGGTTG+TGG | 0.473879 | 3_2:+7675664 | None:intergenic |
| GAGAGAGAGTGGTTAATGCT+GGG | 0.474650 | 3_2:+7675882 | None:intergenic |
| TACTAATATCGAATCATTGA+CGG | 0.479326 | 3_2:-7675450 | Msa0393590:CDS |
| CATAACAAGAGAATGGATAT+CGG | 0.480129 | 3_2:+7676123 | None:intergenic |
| CATTGGTGATTACAGGATGT+TGG | 0.488796 | 3_2:-7674454 | Msa0393590:intron |
| AAGGTGCTTTAGAGAGAGAG+TGG | 0.489289 | 3_2:+7675871 | None:intergenic |
| GAAGATTAATATGAGTGTAA+TGG | 0.491266 | 3_2:+7676023 | None:intergenic |
| TAGAGTTAAATTGACAAGCT+TGG | 0.507280 | 3_2:+7675724 | None:intergenic |
| AAAACAAAGGAATGAAGTGT+TGG | 0.515841 | 3_2:+7675614 | None:intergenic |
| TCGGCTTTGGTTGTGGTGGT+AGG | 0.529686 | 3_2:+7675671 | None:intergenic |
| TCGAAACTCACCCTCGGCAA+AGG | 0.530422 | 3_2:-7675195 | Msa0393590:intron |
| AGAAGCGCTCCGACCTTCAT+GGG | 0.538766 | 3_2:-7675246 | Msa0393590:CDS |
| CAATTACATGTGTTTGGAGA+GGG | 0.543922 | 3_2:-7675510 | Msa0393590:CDS |
| GACTTCAAGTTACAGAAGGA+AGG | 0.544715 | 3_2:+7675278 | None:intergenic |
| AGGGAGCTCACGATGAATGC+GGG | 0.547402 | 3_2:+7675298 | None:intergenic |
| ATGTTTGATAGAAGAGAAAA+CGG | 0.551098 | 3_2:+7675550 | None:intergenic |
| GTGTTGGATGTTGTGTGAAA+AGG | 0.554018 | 3_2:+7676054 | None:intergenic |
| AGTATTCAACATGTTAAATG+TGG | 0.563064 | 3_2:+7675805 | None:intergenic |
| TGTAATGGATGTGAAAGTGT+TGG | 0.564864 | 3_2:+7676038 | None:intergenic |
| ATGGGTACCTACCAAAATTG+TGG | 0.570983 | 3_2:-7675228 | Msa0393590:CDS |
| CAAGGACTTCAAGTTACAGA+AGG | 0.571526 | 3_2:+7675274 | None:intergenic |
| ACTTCAAGTTACAGAAGGAA+GGG | 0.579700 | 3_2:+7675279 | None:intergenic |
| GGAAATATTTGATTCTCACC+GGG | 0.591451 | 3_2:+7675932 | None:intergenic |
| GCTTGGTGCATGAAATGCGA+AGG | 0.605822 | 3_2:+7675741 | None:intergenic |
| CATCGTTACAACAAAAGGAA+AGG | 0.614509 | 3_2:+7675852 | None:intergenic |
| ACATGTTAAATGTGGAAAAG+GGG | 0.614594 | 3_2:+7675813 | None:intergenic |
| GGTCACATATTATGTTCTCA+AGG | 0.616383 | 3_2:-7675429 | Msa0393590:intron |
| ATTGACCGCTGTGTACTTAG+GGG | 0.618286 | 3_2:-7675776 | Msa0393590:CDS |
| ATTGCTTCGAAACTCACCCT+CGG | 0.623699 | 3_2:-7675201 | Msa0393590:CDS |
| AAAGACTGAGAATGAGAACA+TGG | 0.625086 | 3_2:+7675911 | None:intergenic |
| AAGGGAGCTCACGATGAATG+CGG | 0.625088 | 3_2:+7675297 | None:intergenic |
| ACAATTACATGTGTTTGGAG+AGG | 0.628056 | 3_2:-7675511 | Msa0393590:CDS |
| TGGTAGGTACCCATGAAGGT+CGG | 0.638099 | 3_2:+7675237 | None:intergenic |
| GATGATGTGAACCTTTGCCG+AGG | 0.661060 | 3_2:+7675184 | None:intergenic |
| GAAATCGGCTTTGGTTGTGG+TGG | 0.667583 | 3_2:+7675667 | None:intergenic |
| ATTAGCACCAGAGAAAACAA+AGG | 0.673072 | 3_2:+7675601 | None:intergenic |
| TGAGATGAAAAGAAACAGGA+CGG | 0.678530 | 3_2:+7675998 | None:intergenic |
| ATGATGTGAACCTTTGCCGA+GGG | 0.688283 | 3_2:+7675185 | None:intergenic |
| CATTACCCCTAAGTACACAG+CGG | 0.856133 | 3_2:+7675771 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGAATAGATTAAATATTT+GGG | + | chr3_2:7675060-7675079 | None:intergenic | 10.0% |
| !! | ATTTGAATAGATTAAATATT+TGG | + | chr3_2:7675061-7675080 | None:intergenic | 10.0% |
| !! | AATAAACTATAAAAACATTA+GGG | + | chr3_2:7675821-7675840 | None:intergenic | 10.0% |
| !! | TAATAAACTATAAAAACATT+AGG | + | chr3_2:7675822-7675841 | None:intergenic | 10.0% |
| !! | TTTGAATAGATTAAATATTT+GGG | + | chr3_2:7675060-7675079 | None:intergenic | 10.0% |
| !! | ATTTGAATAGATTAAATATT+TGG | + | chr3_2:7675061-7675080 | None:intergenic | 10.0% |
| !! | AATAAACTATAAAAACATTA+GGG | + | chr3_2:7675821-7675840 | None:intergenic | 10.0% |
| !! | TAATAAACTATAAAAACATT+AGG | + | chr3_2:7675822-7675841 | None:intergenic | 10.0% |
| !!! | TGTAATGTTAAATTTTATCA+AGG | - | chr3_2:7675175-7675194 | Msa0393590:intron | 15.0% |
| !! | TTGTATTACTATTACATATT+GGG | + | chr3_2:7675632-7675651 | None:intergenic | 15.0% |
| !! | ATTGTATTACTATTACATAT+TGG | + | chr3_2:7675633-7675652 | None:intergenic | 15.0% |
| !!! | TGTAATGTTAAATTTTATCA+AGG | - | chr3_2:7675175-7675194 | Msa0393590:intron | 15.0% |
| !! | TTGTATTACTATTACATATT+GGG | + | chr3_2:7675632-7675651 | None:intergenic | 15.0% |
| !! | ATTGTATTACTATTACATAT+TGG | + | chr3_2:7675633-7675652 | None:intergenic | 15.0% |
| !! | AATTATATTCCAAAACTCTT+TGG | - | chr3_2:7674963-7674982 | Msa0393590:intron | 20.0% |
| !! | ATTATATTCCAAAACTCTTT+GGG | - | chr3_2:7674964-7674983 | Msa0393590:intron | 20.0% |
| !! | GAGAGCAATTATTTATTAAA+AGG | + | chr3_2:7675661-7675680 | None:intergenic | 20.0% |
| !! | ACAATATCTCCAATAATATA+AGG | + | chr3_2:7675885-7675904 | None:intergenic | 20.0% |
| !!! | TTATTGATGATTTATTTGTC+TGG | - | chr3_2:7675926-7675945 | Msa0393590:CDS | 20.0% |
| !! | AATTATATTCCAAAACTCTT+TGG | - | chr3_2:7674963-7674982 | Msa0393590:intron | 20.0% |
| !! | ATTATATTCCAAAACTCTTT+GGG | - | chr3_2:7674964-7674983 | Msa0393590:intron | 20.0% |
| !! | GAGAGCAATTATTTATTAAA+AGG | + | chr3_2:7675661-7675680 | None:intergenic | 20.0% |
| !! | ACAATATCTCCAATAATATA+AGG | + | chr3_2:7675885-7675904 | None:intergenic | 20.0% |
| !!! | TTATTGATGATTTATTTGTC+TGG | - | chr3_2:7675926-7675945 | Msa0393590:CDS | 20.0% |
| !! | AGGCGTATTCAATAATATTT+TGG | + | chr3_2:7674473-7674492 | None:intergenic | 25.0% |
| ! | GAAGATTAATATGAGTGTAA+TGG | + | chr3_2:7674524-7674543 | None:intergenic | 25.0% |
| ! | AACATGTTAAATGTGGAAAA+GGG | + | chr3_2:7674735-7674754 | None:intergenic | 25.0% |
| ! | AGTATTCAACATGTTAAATG+TGG | + | chr3_2:7674742-7674761 | None:intergenic | 25.0% |
| !!! | TCCAAAATCGATTTTGAAAT+CGG | + | chr3_2:7674895-7674914 | None:intergenic | 25.0% |
| ! | ATGTTTGATAGAAGAGAAAA+CGG | + | chr3_2:7674997-7675016 | None:intergenic | 25.0% |
| ! | TTTACACAATTACATGTGTT+TGG | - | chr3_2:7675028-7675047 | Msa0393590:intron | 25.0% |
| ! | TACTAATATCGAATCATTGA+CGG | - | chr3_2:7675094-7675113 | Msa0393590:intron | 25.0% |
| ! | TATAAAATGCAGCATTAATG+TGG | + | chr3_2:7675154-7675173 | None:intergenic | 25.0% |
| ! | CGAGAAATGAAACTTATTAA+AGG | - | chr3_2:7675382-7675401 | Msa0393590:intron | 25.0% |
| ! | TTATTAAAGGTAGATTGTCT+TGG | - | chr3_2:7675395-7675414 | Msa0393590:intron | 25.0% |
| ! | TAGCTTGATTGAATTAACTT+AGG | - | chr3_2:7675509-7675528 | Msa0393590:CDS | 25.0% |
| !! | TAAAAACATTAGGGAGATTT+TGG | + | chr3_2:7675812-7675831 | None:intergenic | 25.0% |
| !!! | AGTTTATTATTTTAGCAGCT+TGG | - | chr3_2:7675833-7675852 | Msa0393590:CDS | 25.0% |
| ! | AGATCTAGACCTTATATTAT+TGG | - | chr3_2:7675873-7675892 | Msa0393590:CDS | 25.0% |
| !! | AGGCGTATTCAATAATATTT+TGG | + | chr3_2:7674473-7674492 | None:intergenic | 25.0% |
| ! | GAAGATTAATATGAGTGTAA+TGG | + | chr3_2:7674524-7674543 | None:intergenic | 25.0% |
| ! | AACATGTTAAATGTGGAAAA+GGG | + | chr3_2:7674735-7674754 | None:intergenic | 25.0% |
| ! | AGTATTCAACATGTTAAATG+TGG | + | chr3_2:7674742-7674761 | None:intergenic | 25.0% |
| !!! | TCCAAAATCGATTTTGAAAT+CGG | + | chr3_2:7674895-7674914 | None:intergenic | 25.0% |
| ! | ATGTTTGATAGAAGAGAAAA+CGG | + | chr3_2:7674997-7675016 | None:intergenic | 25.0% |
| ! | TTTACACAATTACATGTGTT+TGG | - | chr3_2:7675028-7675047 | Msa0393590:intron | 25.0% |
| ! | TACTAATATCGAATCATTGA+CGG | - | chr3_2:7675094-7675113 | Msa0393590:intron | 25.0% |
| ! | TATAAAATGCAGCATTAATG+TGG | + | chr3_2:7675154-7675173 | None:intergenic | 25.0% |
| ! | CGAGAAATGAAACTTATTAA+AGG | - | chr3_2:7675382-7675401 | Msa0393590:intron | 25.0% |
| ! | TTATTAAAGGTAGATTGTCT+TGG | - | chr3_2:7675395-7675414 | Msa0393590:intron | 25.0% |
| ! | TAGCTTGATTGAATTAACTT+AGG | - | chr3_2:7675509-7675528 | Msa0393590:CDS | 25.0% |
| !! | TAAAAACATTAGGGAGATTT+TGG | + | chr3_2:7675812-7675831 | None:intergenic | 25.0% |
| !!! | AGTTTATTATTTTAGCAGCT+TGG | - | chr3_2:7675833-7675852 | Msa0393590:CDS | 25.0% |
| ! | AGATCTAGACCTTATATTAT+TGG | - | chr3_2:7675873-7675892 | Msa0393590:CDS | 25.0% |
| CATAACAAGAGAATGGATAT+CGG | + | chr3_2:7674424-7674443 | None:intergenic | 30.0% | |
| ! | CTTTTTGCATAACAAGAGAA+TGG | + | chr3_2:7674431-7674450 | None:intergenic | 30.0% |
| TGGAAATATTTGATTCTCAC+CGG | + | chr3_2:7674616-7674635 | None:intergenic | 30.0% | |
| ACATGTTAAATGTGGAAAAG+GGG | + | chr3_2:7674734-7674753 | None:intergenic | 30.0% | |
| CAACATGTTAAATGTGGAAA+AGG | + | chr3_2:7674736-7674755 | None:intergenic | 30.0% | |
| TAGAGTTAAATTGACAAGCT+TGG | + | chr3_2:7674823-7674842 | None:intergenic | 30.0% | |
| !! | CATATGTATCGTTGTTTCTA+TGG | - | chr3_2:7674843-7674862 | Msa0393590:intron | 30.0% |
| AAAACAAAGGAATGAAGTGT+TGG | + | chr3_2:7674933-7674952 | None:intergenic | 30.0% | |
| !! | AATAAGTCCACAATTTTGGT+AGG | + | chr3_2:7675326-7675345 | None:intergenic | 30.0% |
| ! | AAGCAATAAGTCCACAATTT+TGG | + | chr3_2:7675330-7675349 | None:intergenic | 30.0% |
| !!! | TGATTCATTTTGACTTGTGT+TGG | - | chr3_2:7675692-7675711 | Msa0393590:CDS | 30.0% |
| TTATTGGAGATATTGTCTGA+AGG | - | chr3_2:7675889-7675908 | Msa0393590:CDS | 30.0% | |
| CATAACAAGAGAATGGATAT+CGG | + | chr3_2:7674424-7674443 | None:intergenic | 30.0% | |
| ! | CTTTTTGCATAACAAGAGAA+TGG | + | chr3_2:7674431-7674450 | None:intergenic | 30.0% |
| TGGAAATATTTGATTCTCAC+CGG | + | chr3_2:7674616-7674635 | None:intergenic | 30.0% | |
| ACATGTTAAATGTGGAAAAG+GGG | + | chr3_2:7674734-7674753 | None:intergenic | 30.0% | |
| CAACATGTTAAATGTGGAAA+AGG | + | chr3_2:7674736-7674755 | None:intergenic | 30.0% | |
| TAGAGTTAAATTGACAAGCT+TGG | + | chr3_2:7674823-7674842 | None:intergenic | 30.0% | |
| !! | CATATGTATCGTTGTTTCTA+TGG | - | chr3_2:7674843-7674862 | Msa0393590:intron | 30.0% |
| AAAACAAAGGAATGAAGTGT+TGG | + | chr3_2:7674933-7674952 | None:intergenic | 30.0% | |
| !! | AATAAGTCCACAATTTTGGT+AGG | + | chr3_2:7675326-7675345 | None:intergenic | 30.0% |
| ! | AAGCAATAAGTCCACAATTT+TGG | + | chr3_2:7675330-7675349 | None:intergenic | 30.0% |
| !!! | TGATTCATTTTGACTTGTGT+TGG | - | chr3_2:7675692-7675711 | Msa0393590:CDS | 30.0% |
| TTATTGGAGATATTGTCTGA+AGG | - | chr3_2:7675889-7675908 | Msa0393590:CDS | 30.0% | |
| !! | TGTAATGGATGTGAAAGTGT+TGG | + | chr3_2:7674509-7674528 | None:intergenic | 35.0% |
| TGAGATGAAAAGAAACAGGA+CGG | + | chr3_2:7674549-7674568 | None:intergenic | 35.0% | |
| AGTGTGAGATGAAAAGAAAC+AGG | + | chr3_2:7674553-7674572 | None:intergenic | 35.0% | |
| GGAAATATTTGATTCTCACC+GGG | + | chr3_2:7674615-7674634 | None:intergenic | 35.0% | |
| AAAGACTGAGAATGAGAACA+TGG | + | chr3_2:7674636-7674655 | None:intergenic | 35.0% | |
| CATCGTTACAACAAAAGGAA+AGG | + | chr3_2:7674695-7674714 | None:intergenic | 35.0% | |
| !! | TCCTTTTGTTGTAACGATGA+TGG | - | chr3_2:7674696-7674715 | Msa0393590:intron | 35.0% |
| ACCATCATCGTTACAACAAA+AGG | + | chr3_2:7674700-7674719 | None:intergenic | 35.0% | |
| !!! | ATCGATTTTGAAATCGGCTT+TGG | + | chr3_2:7674889-7674908 | None:intergenic | 35.0% |
| !! | GCCGATTTCAAAATCGATTT+TGG | - | chr3_2:7674891-7674910 | Msa0393590:intron | 35.0% |
| !!! | CTTCATTCCTTTGTTTTCTC+TGG | - | chr3_2:7674936-7674955 | Msa0393590:intron | 35.0% |
| ATTAGCACCAGAGAAAACAA+AGG | + | chr3_2:7674946-7674965 | None:intergenic | 35.0% | |
| ACAATTACATGTGTTTGGAG+AGG | - | chr3_2:7675033-7675052 | Msa0393590:intron | 35.0% | |
| CAATTACATGTGTTTGGAGA+GGG | - | chr3_2:7675034-7675053 | Msa0393590:intron | 35.0% | |
| GGTCACATATTATGTTCTCA+AGG | - | chr3_2:7675115-7675134 | Msa0393590:intron | 35.0% | |
| !! | CTAAGCAATGAGGAAGTATT+AGG | + | chr3_2:7675219-7675238 | None:intergenic | 35.0% |
| CTAATACTTCCTCATTGCTT+AGG | - | chr3_2:7675217-7675236 | Msa0393590:CDS | 35.0% | |
| ! | ACTTCAAGTTACAGAAGGAA+GGG | + | chr3_2:7675268-7675287 | None:intergenic | 35.0% |
| CATTCATGGAAAACAGAGAA+GGG | + | chr3_2:7675443-7675462 | None:intergenic | 35.0% | |
| ACATTCATGGAAAACAGAGA+AGG | + | chr3_2:7675444-7675463 | None:intergenic | 35.0% | |
| AACAAACACACACACATTCA+TGG | + | chr3_2:7675457-7675476 | None:intergenic | 35.0% | |
| CACACAGTTAAGTTAAGTTC+AGG | + | chr3_2:7676028-7676047 | None:intergenic | 35.0% | |
| ! | ATTGGTGATTACAGGATGTT+GGG | - | chr3_2:7676091-7676110 | Msa0393590:CDS | 35.0% |
| TAAAAGTCTGCAATGCTTTG+AGG | + | chr3_2:7676143-7676162 | None:intergenic | 35.0% | |
| !!! | CAAAGCATTGCAGACTTTTA+TGG | - | chr3_2:7676143-7676162 | Msa0393590:CDS | 35.0% |
| !! | TGTAATGGATGTGAAAGTGT+TGG | + | chr3_2:7674509-7674528 | None:intergenic | 35.0% |
| TGAGATGAAAAGAAACAGGA+CGG | + | chr3_2:7674549-7674568 | None:intergenic | 35.0% | |
| AGTGTGAGATGAAAAGAAAC+AGG | + | chr3_2:7674553-7674572 | None:intergenic | 35.0% | |
| GGAAATATTTGATTCTCACC+GGG | + | chr3_2:7674615-7674634 | None:intergenic | 35.0% | |
| AAAGACTGAGAATGAGAACA+TGG | + | chr3_2:7674636-7674655 | None:intergenic | 35.0% | |
| CATCGTTACAACAAAAGGAA+AGG | + | chr3_2:7674695-7674714 | None:intergenic | 35.0% | |
| !! | TCCTTTTGTTGTAACGATGA+TGG | - | chr3_2:7674696-7674715 | Msa0393590:intron | 35.0% |
| ACCATCATCGTTACAACAAA+AGG | + | chr3_2:7674700-7674719 | None:intergenic | 35.0% | |
| !!! | ATCGATTTTGAAATCGGCTT+TGG | + | chr3_2:7674889-7674908 | None:intergenic | 35.0% |
| !! | GCCGATTTCAAAATCGATTT+TGG | - | chr3_2:7674891-7674910 | Msa0393590:intron | 35.0% |
| !!! | CTTCATTCCTTTGTTTTCTC+TGG | - | chr3_2:7674936-7674955 | Msa0393590:intron | 35.0% |
| ATTAGCACCAGAGAAAACAA+AGG | + | chr3_2:7674946-7674965 | None:intergenic | 35.0% | |
| ACAATTACATGTGTTTGGAG+AGG | - | chr3_2:7675033-7675052 | Msa0393590:intron | 35.0% | |
| CAATTACATGTGTTTGGAGA+GGG | - | chr3_2:7675034-7675053 | Msa0393590:intron | 35.0% | |
| GGTCACATATTATGTTCTCA+AGG | - | chr3_2:7675115-7675134 | Msa0393590:intron | 35.0% | |
| !! | CTAAGCAATGAGGAAGTATT+AGG | + | chr3_2:7675219-7675238 | None:intergenic | 35.0% |
| CTAATACTTCCTCATTGCTT+AGG | - | chr3_2:7675217-7675236 | Msa0393590:CDS | 35.0% | |
| ! | ACTTCAAGTTACAGAAGGAA+GGG | + | chr3_2:7675268-7675287 | None:intergenic | 35.0% |
| CATTCATGGAAAACAGAGAA+GGG | + | chr3_2:7675443-7675462 | None:intergenic | 35.0% | |
| ACATTCATGGAAAACAGAGA+AGG | + | chr3_2:7675444-7675463 | None:intergenic | 35.0% | |
| AACAAACACACACACATTCA+TGG | + | chr3_2:7675457-7675476 | None:intergenic | 35.0% | |
| CACACAGTTAAGTTAAGTTC+AGG | + | chr3_2:7676028-7676047 | None:intergenic | 35.0% | |
| ! | ATTGGTGATTACAGGATGTT+GGG | - | chr3_2:7676091-7676110 | Msa0393590:CDS | 35.0% |
| TAAAAGTCTGCAATGCTTTG+AGG | + | chr3_2:7676143-7676162 | None:intergenic | 35.0% | |
| !!! | CAAAGCATTGCAGACTTTTA+TGG | - | chr3_2:7676143-7676162 | Msa0393590:CDS | 35.0% |
| GTGTTGGATGTTGTGTGAAA+AGG | + | chr3_2:7674493-7674512 | None:intergenic | 40.0% | |
| TTAACGTCTCTCAGTCTTAC+TGG | - | chr3_2:7674573-7674592 | Msa0393590:intron | 40.0% | |
| GGTATCAATCTAATGCTTCC+CGG | - | chr3_2:7674594-7674613 | Msa0393590:intron | 40.0% | |
| ! | GCATGAAATGCGAAGGTTTT+GGG | + | chr3_2:7674799-7674818 | None:intergenic | 40.0% |
| ! | TGCATGAAATGCGAAGGTTT+TGG | + | chr3_2:7674800-7674819 | None:intergenic | 40.0% |
| ! | TTTGAAATCGGCTTTGGTTG+TGG | + | chr3_2:7674883-7674902 | None:intergenic | 40.0% |
| ! | GACTTCAAGTTACAGAAGGA+AGG | + | chr3_2:7675269-7675288 | None:intergenic | 40.0% |
| ! | CAAGGACTTCAAGTTACAGA+AGG | + | chr3_2:7675273-7675292 | None:intergenic | 40.0% |
| !! | ATTTTGGTAGGTACCCATGA+AGG | + | chr3_2:7675314-7675333 | None:intergenic | 40.0% |
| ATGGGTACCTACCAAAATTG+TGG | - | chr3_2:7675316-7675335 | Msa0393590:intron | 40.0% | |
| ACTTGTGTTGGAATGTCTCT+TGG | - | chr3_2:7675704-7675723 | Msa0393590:CDS | 40.0% | |
| CTTGTGTTGGAATGTCTCTT+GGG | - | chr3_2:7675705-7675724 | Msa0393590:CDS | 40.0% | |
| TTAGCAGCTTGGTTTCTGTT+TGG | - | chr3_2:7675844-7675863 | Msa0393590:CDS | 40.0% | |
| ! | CATTGGTGATTACAGGATGT+TGG | - | chr3_2:7676090-7676109 | Msa0393590:CDS | 40.0% |
| GTGTTGGATGTTGTGTGAAA+AGG | + | chr3_2:7674493-7674512 | None:intergenic | 40.0% | |
| TTAACGTCTCTCAGTCTTAC+TGG | - | chr3_2:7674573-7674592 | Msa0393590:intron | 40.0% | |
| GGTATCAATCTAATGCTTCC+CGG | - | chr3_2:7674594-7674613 | Msa0393590:intron | 40.0% | |
| ! | GCATGAAATGCGAAGGTTTT+GGG | + | chr3_2:7674799-7674818 | None:intergenic | 40.0% |
| ! | TGCATGAAATGCGAAGGTTT+TGG | + | chr3_2:7674800-7674819 | None:intergenic | 40.0% |
| ! | TTTGAAATCGGCTTTGGTTG+TGG | + | chr3_2:7674883-7674902 | None:intergenic | 40.0% |
| ! | GACTTCAAGTTACAGAAGGA+AGG | + | chr3_2:7675269-7675288 | None:intergenic | 40.0% |
| ! | CAAGGACTTCAAGTTACAGA+AGG | + | chr3_2:7675273-7675292 | None:intergenic | 40.0% |
| !! | ATTTTGGTAGGTACCCATGA+AGG | + | chr3_2:7675314-7675333 | None:intergenic | 40.0% |
| ATGGGTACCTACCAAAATTG+TGG | - | chr3_2:7675316-7675335 | Msa0393590:intron | 40.0% | |
| ACTTGTGTTGGAATGTCTCT+TGG | - | chr3_2:7675704-7675723 | Msa0393590:CDS | 40.0% | |
| CTTGTGTTGGAATGTCTCTT+GGG | - | chr3_2:7675705-7675724 | Msa0393590:CDS | 40.0% | |
| TTAGCAGCTTGGTTTCTGTT+TGG | - | chr3_2:7675844-7675863 | Msa0393590:CDS | 40.0% | |
| ! | CATTGGTGATTACAGGATGT+TGG | - | chr3_2:7676090-7676109 | Msa0393590:CDS | 40.0% |
| GAGAGAGAGTGGTTAATGCT+GGG | + | chr3_2:7674665-7674684 | None:intergenic | 45.0% | |
| AGAGAGAGAGTGGTTAATGC+TGG | + | chr3_2:7674666-7674685 | None:intergenic | 45.0% | |
| !! | AAGGTGCTTTAGAGAGAGAG+TGG | + | chr3_2:7674676-7674695 | None:intergenic | 45.0% |
| TCATTGACCGCTGTGTACTT+AGG | - | chr3_2:7674766-7674785 | Msa0393590:intron | 45.0% | |
| CATTGACCGCTGTGTACTTA+GGG | - | chr3_2:7674767-7674786 | Msa0393590:intron | 45.0% | |
| ATTGACCGCTGTGTACTTAG+GGG | - | chr3_2:7674768-7674787 | Msa0393590:intron | 45.0% | |
| CATTACCCCTAAGTACACAG+CGG | + | chr3_2:7674776-7674795 | None:intergenic | 45.0% | |
| ! | GTCTTGCTCCCAAAGAGTTT+TGG | + | chr3_2:7674975-7674994 | None:intergenic | 45.0% |
| GGGATAGAACCTAAGCAATG+AGG | + | chr3_2:7675229-7675248 | None:intergenic | 45.0% | |
| ! | TCGGAGCGCTTCTATATTCA+AGG | + | chr3_2:7675291-7675310 | None:intergenic | 45.0% |
| ATTGCTTCGAAACTCACCCT+CGG | - | chr3_2:7675343-7675362 | Msa0393590:intron | 45.0% | |
| ATGATGTGAACCTTTGCCGA+GGG | + | chr3_2:7675362-7675381 | None:intergenic | 45.0% | |
| !! | ACAAGATAGGAGCATCTACG+AGG | + | chr3_2:7675535-7675554 | None:intergenic | 45.0% |
| CACACACACACACACAAGAT+AGG | + | chr3_2:7675548-7675567 | None:intergenic | 45.0% | |
| TGTTGGAATGTCTCTTGGGA+CGG | - | chr3_2:7675709-7675728 | Msa0393590:CDS | 45.0% | |
| ! | TCTTTGAAGACCCACTGCAT+TGG | - | chr3_2:7676073-7676092 | Msa0393590:CDS | 45.0% |
| CCTGTAATCACCAATGCAGT+GGG | + | chr3_2:7676086-7676105 | None:intergenic | 45.0% | |
| TCCTGTAATCACCAATGCAG+TGG | + | chr3_2:7676087-7676106 | None:intergenic | 45.0% | |
| ! | GATGTTGGGTTGCAGACTAT+TGG | - | chr3_2:7676105-7676124 | Msa0393590:CDS | 45.0% |
| GAGAGAGAGTGGTTAATGCT+GGG | + | chr3_2:7674665-7674684 | None:intergenic | 45.0% | |
| AGAGAGAGAGTGGTTAATGC+TGG | + | chr3_2:7674666-7674685 | None:intergenic | 45.0% | |
| !! | AAGGTGCTTTAGAGAGAGAG+TGG | + | chr3_2:7674676-7674695 | None:intergenic | 45.0% |
| TCATTGACCGCTGTGTACTT+AGG | - | chr3_2:7674766-7674785 | Msa0393590:intron | 45.0% | |
| CATTGACCGCTGTGTACTTA+GGG | - | chr3_2:7674767-7674786 | Msa0393590:intron | 45.0% | |
| ATTGACCGCTGTGTACTTAG+GGG | - | chr3_2:7674768-7674787 | Msa0393590:intron | 45.0% | |
| CATTACCCCTAAGTACACAG+CGG | + | chr3_2:7674776-7674795 | None:intergenic | 45.0% | |
| ! | GTCTTGCTCCCAAAGAGTTT+TGG | + | chr3_2:7674975-7674994 | None:intergenic | 45.0% |
| GGGATAGAACCTAAGCAATG+AGG | + | chr3_2:7675229-7675248 | None:intergenic | 45.0% | |
| ! | TCGGAGCGCTTCTATATTCA+AGG | + | chr3_2:7675291-7675310 | None:intergenic | 45.0% |
| ATTGCTTCGAAACTCACCCT+CGG | - | chr3_2:7675343-7675362 | Msa0393590:intron | 45.0% | |
| ATGATGTGAACCTTTGCCGA+GGG | + | chr3_2:7675362-7675381 | None:intergenic | 45.0% | |
| !! | ACAAGATAGGAGCATCTACG+AGG | + | chr3_2:7675535-7675554 | None:intergenic | 45.0% |
| CACACACACACACACAAGAT+AGG | + | chr3_2:7675548-7675567 | None:intergenic | 45.0% | |
| TGTTGGAATGTCTCTTGGGA+CGG | - | chr3_2:7675709-7675728 | Msa0393590:CDS | 45.0% | |
| ! | TCTTTGAAGACCCACTGCAT+TGG | - | chr3_2:7676073-7676092 | Msa0393590:CDS | 45.0% |
| CCTGTAATCACCAATGCAGT+GGG | + | chr3_2:7676086-7676105 | None:intergenic | 45.0% | |
| TCCTGTAATCACCAATGCAG+TGG | + | chr3_2:7676087-7676106 | None:intergenic | 45.0% | |
| ! | GATGTTGGGTTGCAGACTAT+TGG | - | chr3_2:7676105-7676124 | Msa0393590:CDS | 45.0% |
| !! | GCTTGGTGCATGAAATGCGA+AGG | + | chr3_2:7674806-7674825 | None:intergenic | 50.0% |
| ! | GAAATCGGCTTTGGTTGTGG+TGG | + | chr3_2:7674880-7674899 | None:intergenic | 50.0% |
| AAGGGAGCTCACGATGAATG+CGG | + | chr3_2:7675250-7675269 | None:intergenic | 50.0% | |
| TGGTAGGTACCCATGAAGGT+CGG | + | chr3_2:7675310-7675329 | None:intergenic | 50.0% | |
| GATGATGTGAACCTTTGCCG+AGG | + | chr3_2:7675363-7675382 | None:intergenic | 50.0% | |
| TTGCAGGTCAGACAGACAAG+AGG | + | chr3_2:7675784-7675803 | None:intergenic | 50.0% | |
| CTTGTCTGTCTGACCTGCAA+AGG | - | chr3_2:7675784-7675803 | Msa0393590:CDS | 50.0% | |
| !!! | GGAGATTTTGGCTCCTTTGC+AGG | + | chr3_2:7675800-7675819 | None:intergenic | 50.0% |
| GGGTCTTCAAAGAGAAGAGC+TGG | + | chr3_2:7676066-7676085 | None:intergenic | 50.0% | |
| ! | CCCACTGCATTGGTGATTAC+AGG | - | chr3_2:7676083-7676102 | Msa0393590:CDS | 50.0% |
| !! | GCTTGGTGCATGAAATGCGA+AGG | + | chr3_2:7674806-7674825 | None:intergenic | 50.0% |
| ! | GAAATCGGCTTTGGTTGTGG+TGG | + | chr3_2:7674880-7674899 | None:intergenic | 50.0% |
| AAGGGAGCTCACGATGAATG+CGG | + | chr3_2:7675250-7675269 | None:intergenic | 50.0% | |
| TGGTAGGTACCCATGAAGGT+CGG | + | chr3_2:7675310-7675329 | None:intergenic | 50.0% | |
| GATGATGTGAACCTTTGCCG+AGG | + | chr3_2:7675363-7675382 | None:intergenic | 50.0% | |
| TTGCAGGTCAGACAGACAAG+AGG | + | chr3_2:7675784-7675803 | None:intergenic | 50.0% | |
| CTTGTCTGTCTGACCTGCAA+AGG | - | chr3_2:7675784-7675803 | Msa0393590:CDS | 50.0% | |
| !!! | GGAGATTTTGGCTCCTTTGC+AGG | + | chr3_2:7675800-7675819 | None:intergenic | 50.0% |
| GGGTCTTCAAAGAGAAGAGC+TGG | + | chr3_2:7676066-7676085 | None:intergenic | 50.0% | |
| ! | CCCACTGCATTGGTGATTAC+AGG | - | chr3_2:7676083-7676102 | Msa0393590:CDS | 50.0% |
| ! | TCGGCTTTGGTTGTGGTGGT+AGG | + | chr3_2:7674876-7674895 | None:intergenic | 55.0% |
| AGGGAGCTCACGATGAATGC+GGG | + | chr3_2:7675249-7675268 | None:intergenic | 55.0% | |
| !! | TAGAAGCGCTCCGACCTTCA+TGG | - | chr3_2:7675297-7675316 | Msa0393590:CDS | 55.0% |
| !! | AGAAGCGCTCCGACCTTCAT+GGG | - | chr3_2:7675298-7675317 | Msa0393590:CDS | 55.0% |
| TCGAAACTCACCCTCGGCAA+AGG | - | chr3_2:7675349-7675368 | Msa0393590:intron | 55.0% | |
| ! | TCGGCTTTGGTTGTGGTGGT+AGG | + | chr3_2:7674876-7674895 | None:intergenic | 55.0% |
| AGGGAGCTCACGATGAATGC+GGG | + | chr3_2:7675249-7675268 | None:intergenic | 55.0% | |
| !! | TAGAAGCGCTCCGACCTTCA+TGG | - | chr3_2:7675297-7675316 | Msa0393590:CDS | 55.0% |
| !! | AGAAGCGCTCCGACCTTCAT+GGG | - | chr3_2:7675298-7675317 | Msa0393590:CDS | 55.0% |
| TCGAAACTCACCCTCGGCAA+AGG | - | chr3_2:7675349-7675368 | Msa0393590:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 7674393 | 7676173 | 7674393 | ID=Msa0393590;Name=Msa0393590 |
| chr3_2 | mRNA | 7674393 | 7676173 | 7674393 | ID=Msa0393590-mRNA-1;Parent=Msa0393590;Name=Msa0393590-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0|0|0.66|1|1|3|0|314 |
| chr3_2 | exon | 7675430 | 7676173 | 7675430 | ID=Msa0393590-mRNA-1:exon:1995;Parent=Msa0393590-mRNA-1 |
| chr3_2 | exon | 7675196 | 7675327 | 7675196 | ID=Msa0393590-mRNA-1:exon:1994;Parent=Msa0393590-mRNA-1 |
| chr3_2 | exon | 7674393 | 7674461 | 7674393 | ID=Msa0393590-mRNA-1:exon:1993;Parent=Msa0393590-mRNA-1 |
| chr3_2 | CDS | 7675430 | 7676173 | 7675430 | ID=Msa0393590-mRNA-1:cds;Parent=Msa0393590-mRNA-1 |
| chr3_2 | CDS | 7675196 | 7675327 | 7675196 | ID=Msa0393590-mRNA-1:cds;Parent=Msa0393590-mRNA-1 |
| chr3_2 | CDS | 7674393 | 7674461 | 7674393 | ID=Msa0393590-mRNA-1:cds;Parent=Msa0393590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
