Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1289070 | XP_013445823.1 | 89.456 | 294 | 23 | 3 | 1 | 294 | 1 | 286 | 1.25e-174 | 494 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1289070 | sp|Q02283|HAT5_ARATH | 61.682 | 107 | 41 | 0 | 95 | 201 | 66 | 172 | 8.53e-39 | 140 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1289070 | A0A072TQU2 | 89.456 | 294 | 23 | 3 | 1 | 294 | 1 | 286 | 5.97e-175 | 494 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1289070 | TF | HB-HD-ZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1196080 | Msa1289070 | 0.812035 | 5.190043e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1289070 | MtrunA17_Chr8g0362751 | 89.456 | 294 | 23 | 3 | 1 | 294 | 1 | 286 | 1.15e-178 | 494 |
| Msa1289070 | MtrunA17_Chr5g0415941 | 54.599 | 337 | 97 | 10 | 1 | 294 | 1 | 324 | 5.22e-105 | 308 |
| Msa1289070 | MtrunA17_Chr4g0060031 | 41.379 | 290 | 113 | 8 | 54 | 294 | 56 | 337 | 1.23e-53 | 177 |
| Msa1289070 | MtrunA17_Chr6g0450991 | 68.687 | 99 | 31 | 0 | 95 | 193 | 65 | 163 | 8.18e-40 | 140 |
| Msa1289070 | MtrunA17_Chr8g0381741 | 46.386 | 166 | 66 | 4 | 89 | 234 | 45 | 207 | 2.11e-38 | 137 |
| Msa1289070 | MtrunA17_Chr3g0123691 | 57.895 | 114 | 48 | 0 | 93 | 206 | 56 | 169 | 2.34e-36 | 132 |
| Msa1289070 | MtrunA17_Chr5g0416391 | 64.583 | 96 | 34 | 0 | 97 | 192 | 77 | 172 | 6.73e-35 | 127 |
| Msa1289070 | MtrunA17_Chr8g0362151 | 63.542 | 96 | 35 | 0 | 97 | 192 | 77 | 172 | 9.12e-35 | 127 |
| Msa1289070 | MtrunA17_Chr3g0119291 | 49.664 | 149 | 66 | 3 | 68 | 215 | 34 | 174 | 1.46e-34 | 125 |
| Msa1289070 | MtrunA17_Chr6g0453021 | 61.818 | 110 | 37 | 2 | 84 | 192 | 86 | 191 | 6.27e-34 | 124 |
| Msa1289070 | MtrunA17_Chr7g0217111 | 57.292 | 96 | 41 | 0 | 97 | 192 | 80 | 175 | 1.03e-25 | 102 |
| Msa1289070 | MtrunA17_Chr8g0346251 | 38.202 | 178 | 87 | 6 | 101 | 272 | 45 | 205 | 3.57e-25 | 100 |
| Msa1289070 | MtrunA17_Chr7g0265521 | 51.546 | 97 | 40 | 1 | 97 | 193 | 63 | 152 | 1.51e-24 | 99.0 |
| Msa1289070 | MtrunA17_Chr3g0127511 | 37.500 | 176 | 90 | 4 | 99 | 268 | 40 | 201 | 1.48e-23 | 96.7 |
| Msa1289070 | MtrunA17_Chr1g0179581 | 59.722 | 72 | 29 | 0 | 97 | 168 | 28 | 99 | 1.53e-23 | 92.8 |
| Msa1289070 | MtrunA17_Chr5g0403701 | 58.571 | 70 | 29 | 0 | 97 | 166 | 53 | 122 | 1.74e-19 | 84.7 |
| Msa1289070 | MtrunA17_Chr5g0403691 | 58.571 | 70 | 29 | 0 | 97 | 166 | 53 | 122 | 6.09e-19 | 83.6 |
| Msa1289070 | MtrunA17_Chr4g0071411 | 47.253 | 91 | 41 | 1 | 100 | 190 | 91 | 174 | 9.37e-18 | 80.1 |
| Msa1289070 | MtrunA17_Chr4g0055851 | 45.745 | 94 | 44 | 1 | 97 | 190 | 120 | 206 | 3.25e-16 | 77.0 |
| Msa1289070 | MtrunA17_Chr7g0258831 | 37.692 | 130 | 66 | 3 | 61 | 190 | 132 | 246 | 1.34e-15 | 75.5 |
| Msa1289070 | MtrunA17_Chr1g0151971 | 45.833 | 96 | 45 | 1 | 95 | 190 | 128 | 216 | 2.60e-15 | 74.7 |
| Msa1289070 | MtrunA17_Chr5g0400781 | 44.681 | 94 | 45 | 1 | 97 | 190 | 123 | 209 | 2.72e-15 | 74.3 |
| Msa1289070 | MtrunA17_Chr2g0308611 | 38.596 | 114 | 63 | 1 | 77 | 190 | 180 | 286 | 4.99e-15 | 74.3 |
| Msa1289070 | MtrunA17_Chr4g0044091 | 42.708 | 96 | 48 | 1 | 95 | 190 | 63 | 151 | 5.13e-15 | 72.0 |
| Msa1289070 | MtrunA17_Chr5g0399491 | 45.745 | 94 | 44 | 1 | 97 | 190 | 136 | 222 | 1.02e-14 | 73.2 |
| Msa1289070 | MtrunA17_Chr4g0054421 | 45.745 | 94 | 44 | 1 | 97 | 190 | 127 | 213 | 1.23e-14 | 72.4 |
| Msa1289070 | MtrunA17_Chr1g0175651 | 41.379 | 116 | 54 | 3 | 75 | 190 | 139 | 240 | 1.33e-14 | 72.8 |
| Msa1289070 | MtrunA17_Chr8g0335131 | 44.681 | 94 | 45 | 1 | 97 | 190 | 146 | 232 | 4.32e-14 | 71.2 |
| Msa1289070 | MtrunA17_Chr3g0135331 | 48.611 | 72 | 37 | 0 | 97 | 168 | 145 | 216 | 6.45e-13 | 67.8 |
| Msa1289070 | MtrunA17_Chr2g0299031 | 40.426 | 94 | 49 | 1 | 97 | 190 | 82 | 168 | 6.64e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1289070 | AT3G01470.1 | 61.682 | 107 | 41 | 0 | 95 | 201 | 66 | 172 | 8.67e-40 | 140 |
| Msa1289070 | AT4G40060.1 | 49.660 | 147 | 65 | 3 | 86 | 226 | 45 | 188 | 8.36e-37 | 133 |
| Msa1289070 | AT2G22430.1 | 64.948 | 97 | 34 | 0 | 97 | 193 | 62 | 158 | 9.62e-36 | 130 |
| Msa1289070 | AT5G15150.1 | 46.108 | 167 | 75 | 5 | 39 | 192 | 46 | 210 | 1.21e-34 | 128 |
| Msa1289070 | AT1G69780.1 | 57.143 | 112 | 44 | 1 | 81 | 192 | 73 | 180 | 1.47e-34 | 127 |
| Msa1289070 | AT5G65310.2 | 63.918 | 97 | 35 | 0 | 97 | 193 | 54 | 150 | 1.83e-34 | 127 |
| Msa1289070 | AT5G65310.1 | 63.918 | 97 | 35 | 0 | 97 | 193 | 72 | 168 | 1.95e-34 | 127 |
| Msa1289070 | AT3G01220.1 | 45.062 | 162 | 69 | 5 | 38 | 192 | 34 | 182 | 1.46e-31 | 119 |
| Msa1289070 | AT1G27045.1 | 42.857 | 168 | 73 | 2 | 42 | 209 | 32 | 176 | 9.75e-31 | 115 |
| Msa1289070 | AT1G27045.5 | 55.046 | 109 | 45 | 1 | 89 | 193 | 13 | 121 | 1.45e-30 | 114 |
| Msa1289070 | AT1G27045.3 | 55.046 | 109 | 45 | 1 | 89 | 193 | 13 | 121 | 1.45e-30 | 114 |
| Msa1289070 | AT1G27045.2 | 55.046 | 109 | 45 | 1 | 89 | 193 | 5 | 113 | 2.05e-30 | 113 |
| Msa1289070 | AT1G27045.4 | 44.000 | 150 | 65 | 1 | 42 | 191 | 32 | 162 | 4.00e-29 | 112 |
| Msa1289070 | AT1G26960.1 | 55.208 | 96 | 43 | 0 | 97 | 192 | 71 | 166 | 4.32e-27 | 106 |
| Msa1289070 | AT2G46680.1 | 49.074 | 108 | 55 | 0 | 93 | 200 | 28 | 135 | 4.46e-26 | 103 |
| Msa1289070 | AT2G46680.2 | 51.579 | 95 | 46 | 0 | 93 | 187 | 28 | 122 | 1.12e-24 | 100 |
| Msa1289070 | AT3G61890.1 | 51.485 | 101 | 48 | 1 | 100 | 200 | 33 | 132 | 1.92e-24 | 99.0 |
| Msa1289070 | AT4G36740.1 | 48.182 | 110 | 50 | 1 | 97 | 206 | 55 | 157 | 1.68e-23 | 95.9 |
| Msa1289070 | AT4G36740.2 | 48.182 | 110 | 50 | 1 | 97 | 206 | 56 | 158 | 1.75e-23 | 95.9 |
| Msa1289070 | AT5G03790.1 | 51.724 | 87 | 42 | 0 | 97 | 183 | 77 | 163 | 8.39e-22 | 92.0 |
| Msa1289070 | AT2G18550.1 | 45.455 | 110 | 53 | 1 | 97 | 206 | 61 | 163 | 2.08e-21 | 90.5 |
| Msa1289070 | AT5G03790.2 | 56.944 | 72 | 31 | 0 | 97 | 168 | 77 | 148 | 6.73e-21 | 88.6 |
| Msa1289070 | AT2G36610.1 | 44.762 | 105 | 43 | 2 | 94 | 190 | 68 | 165 | 7.36e-20 | 85.5 |
| Msa1289070 | AT5G66700.1 | 55.714 | 70 | 31 | 0 | 97 | 166 | 71 | 140 | 3.97e-19 | 84.7 |
| Msa1289070 | AT5G53980.1 | 42.857 | 98 | 56 | 0 | 97 | 194 | 11 | 108 | 2.20e-17 | 78.2 |
| Msa1289070 | AT5G06710.1 | 42.857 | 112 | 52 | 2 | 79 | 190 | 177 | 276 | 4.41e-17 | 80.5 |
| Msa1289070 | AT4G37790.1 | 42.342 | 111 | 53 | 2 | 80 | 190 | 113 | 212 | 1.50e-16 | 78.2 |
| Msa1289070 | AT4G17460.1 | 39.496 | 119 | 60 | 3 | 79 | 196 | 121 | 228 | 4.72e-15 | 74.3 |
| Msa1289070 | AT5G47370.1 | 43.617 | 94 | 46 | 1 | 97 | 190 | 130 | 216 | 1.50e-14 | 72.8 |
| Msa1289070 | AT2G44910.1 | 44.681 | 94 | 45 | 1 | 97 | 190 | 163 | 249 | 2.75e-14 | 72.4 |
| Msa1289070 | AT2G01430.1 | 39.316 | 117 | 56 | 3 | 79 | 190 | 119 | 225 | 3.57e-14 | 71.6 |
| Msa1289070 | AT2G22800.1 | 43.617 | 94 | 46 | 1 | 97 | 190 | 113 | 199 | 6.25e-14 | 70.9 |
| Msa1289070 | AT3G60390.1 | 43.617 | 94 | 46 | 1 | 97 | 190 | 162 | 248 | 1.06e-13 | 70.9 |
| Msa1289070 | AT4G16780.1 | 39.640 | 111 | 53 | 2 | 80 | 190 | 119 | 215 | 1.34e-13 | 70.1 |
| Msa1289070 | AT5G06710.4 | 47.887 | 71 | 32 | 1 | 79 | 149 | 177 | 242 | 9.86e-13 | 67.4 |
| Msa1289070 | AT2G01430.2 | 50.909 | 55 | 27 | 0 | 95 | 149 | 137 | 191 | 5.56e-11 | 61.6 |
| Msa1289070 | AT1G70920.2 | 41.860 | 86 | 43 | 1 | 97 | 175 | 39 | 124 | 8.75e-11 | 60.1 |
| Msa1289070 | AT1G70920.1 | 41.860 | 86 | 43 | 1 | 97 | 175 | 69 | 154 | 9.37e-11 | 60.8 |
Find 40 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAGTTGAACTTTCCTTTC+AGG | 0.151314 | 8_3:-42670498 | None:intergenic |
| TTATTAACATTTATTGCTTT+TGG | 0.253548 | 8_3:-42671674 | None:intergenic |
| GGATTCAGGTTCCAATTCTA+TGG | 0.265364 | 8_3:+42670278 | Msa1289070:CDS |
| CATCCAACATCTTCAACTTT+AGG | 0.279222 | 8_3:-42671525 | None:intergenic |
| ATGGAACAGTCAAGAGGTTT+TGG | 0.294494 | 8_3:-42671497 | None:intergenic |
| CACAACATTAACCATAGAAT+TGG | 0.312837 | 8_3:-42670289 | None:intergenic |
| AGCCAAGACAAGTGGCTATA+TGG | 0.377381 | 8_3:+42670538 | Msa1289070:CDS |
| TGAGCTTGTCGAGTCTCTCT+TGG | 0.402134 | 8_3:+42669532 | Msa1289070:CDS |
| TGTGAAAATTCTGACTGGTT+TGG | 0.408830 | 8_3:-42671453 | None:intergenic |
| CTGGTTTGGTTCCACAACTA+AGG | 0.419648 | 8_3:-42671439 | None:intergenic |
| TCTTCAACTTTAGGTATGAA+TGG | 0.429614 | 8_3:-42671516 | None:intergenic |
| ATGGTTAATGTTGTGAATGT+TGG | 0.445460 | 8_3:+42670297 | Msa1289070:CDS |
| TATTTCTCTCAAGAAAAGAT+TGG | 0.446084 | 8_3:+42671299 | Msa1289070:CDS |
| GGTTTCCATCAGTGTTCTGT+AGG | 0.464695 | 8_3:-42671413 | None:intergenic |
| AAACAGCTAGAAAAGGACTA+TGG | 0.477186 | 8_3:+42670591 | Msa1289070:CDS |
| CATCTTGTGAAAATTCTGAC+TGG | 0.483181 | 8_3:-42671458 | None:intergenic |
| ATACCTAAAGTTGAAGATGT+TGG | 0.484817 | 8_3:+42671522 | Msa1289070:CDS |
| AATGAATCACCTTGACAAGA+AGG | 0.485040 | 8_3:-42669575 | None:intergenic |
| AACCATATAGCCACTTGTCT+TGG | 0.489367 | 8_3:-42670540 | None:intergenic |
| TTCTTTCTCAAAAGCTTGAA+AGG | 0.511197 | 8_3:-42670346 | None:intergenic |
| CAAAACCAAACAGCTAGAAA+AGG | 0.514734 | 8_3:+42670584 | Msa1289070:CDS |
| TTGGTTCCACAACTAAGGAT+TGG | 0.517249 | 8_3:-42671434 | None:intergenic |
| TTTGTGAAATGATATCATCA+AGG | 0.518295 | 8_3:-42671362 | None:intergenic |
| TTGTGAAATGATATCATCAA+GGG | 0.525597 | 8_3:-42671361 | None:intergenic |
| AGCTCAAAACCTTCTTGTCA+AGG | 0.547348 | 8_3:+42669566 | Msa1289070:CDS |
| AAACAACAAATTAAAAGAAG+AGG | 0.565427 | 8_3:+42670671 | Msa1289070:CDS |
| GAATGCCTACAGAACACTGA+TGG | 0.567809 | 8_3:+42671408 | Msa1289070:CDS |
| AAAACAAGCTTGAACCTGAA+AGG | 0.570250 | 8_3:+42670484 | Msa1289070:CDS |
| GAGGTTTGCTTGCACCAACC+CGG | 0.579797 | 8_3:+42670402 | Msa1289070:CDS |
| TTACGATGATGAGAACTATG+AGG | 0.588316 | 8_3:+42670383 | Msa1289070:CDS |
| TGTTGTGAATGTTGGTGACA+TGG | 0.591929 | 8_3:+42670305 | Msa1289070:CDS |
| GTTGTGAATGTTGGTGACAT+GGG | 0.593413 | 8_3:+42670306 | Msa1289070:CDS |
| TACTAGTGGAATGTTAATGT+TGG | 0.596082 | 8_3:+42671635 | Msa1289070:three_prime_UTR |
| TAGCTTGCAGCCAAGACAAG+TGG | 0.597298 | 8_3:+42670530 | Msa1289070:CDS |
| TATTGAGTCAGTACTACTAG+TGG | 0.599266 | 8_3:+42671621 | Msa1289070:exon |
| TGGAAACCAATCCTTAGTTG+TGG | 0.606983 | 8_3:+42671428 | Msa1289070:CDS |
| AAGGAAAGTTCAACTTGCAA+AGG | 0.607696 | 8_3:+42670503 | Msa1289070:CDS |
| TCGACAAGCTCAGAAGAGCA+TGG | 0.620607 | 8_3:-42669521 | None:intergenic |
| AAGCTACAGCAACTTTCATG+TGG | 0.654541 | 8_3:-42671558 | None:intergenic |
| GTATGAATGGAACAGTCAAG+AGG | 0.655378 | 8_3:-42671503 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATAATGTGATTTTTTAA+TGG | - | chr8_3:42669864-42669883 | None:intergenic | 10.0% |
| !!! | AAAATAATGTGATTTTTTAA+TGG | - | chr8_3:42669864-42669883 | None:intergenic | 10.0% |
| !! | TAATAAAAACTTACTTCATT+TGG | - | chr8_3:42670038-42670057 | None:intergenic | 15.0% |
| !!! | AAAACAAGGTTTTAAAAAAA+GGG | - | chr8_3:42670171-42670190 | None:intergenic | 15.0% |
| !!! | TAAAACAAGGTTTTAAAAAA+AGG | - | chr8_3:42670172-42670191 | None:intergenic | 15.0% |
| !!! | TTATTAACATTTATTGCTTT+TGG | - | chr8_3:42671677-42671696 | None:intergenic | 15.0% |
| !! | TAATAAAAACTTACTTCATT+TGG | - | chr8_3:42670038-42670057 | None:intergenic | 15.0% |
| !!! | AAAACAAGGTTTTAAAAAAA+GGG | - | chr8_3:42670171-42670190 | None:intergenic | 15.0% |
| !!! | TAAAACAAGGTTTTAAAAAA+AGG | - | chr8_3:42670172-42670191 | None:intergenic | 15.0% |
| !!! | TTATTAACATTTATTGCTTT+TGG | - | chr8_3:42671677-42671696 | None:intergenic | 15.0% |
| !!! | TAATGTGATTTTTTAATGGA+CGG | - | chr8_3:42669860-42669879 | None:intergenic | 20.0% |
| !!! | ATTAAGGACGTTTTTTTTTA+AGG | + | chr8_3:42669974-42669993 | Msa1289070:intron | 20.0% |
| !!! | GTAAATAGAATTTTATGTCT+TGG | - | chr8_3:42670107-42670126 | None:intergenic | 20.0% |
| !!! | ATTCAATCTTGATTTTTCAT+TGG | - | chr8_3:42670209-42670228 | None:intergenic | 20.0% |
| !!! | ATACAAAGTTACATTTTCTT+AGG | + | chr8_3:42670252-42670271 | Msa1289070:intron | 20.0% |
| !! | AAACAACAAATTAAAAGAAG+AGG | + | chr8_3:42670671-42670690 | Msa1289070:CDS | 20.0% |
| !!! | CAAGCTTAATCTATTTTTAT+CGG | + | chr8_3:42671010-42671029 | Msa1289070:intron | 20.0% |
| !!! | ATATAATTTTATCCCACTAA+TGG | + | chr8_3:42671238-42671257 | Msa1289070:intron | 20.0% |
| !!! | TAATGGTAAGTGATTAATTT+TGG | + | chr8_3:42671255-42671274 | Msa1289070:intron | 20.0% |
| !!! | TATTTTCCTCTTTTTTTCTT+GGG | - | chr8_3:42671326-42671345 | None:intergenic | 20.0% |
| !!! | TTATTTTCCTCTTTTTTTCT+TGG | - | chr8_3:42671327-42671346 | None:intergenic | 20.0% |
| !! | TTCACAAAATAAAAATGATG+TGG | + | chr8_3:42671377-42671396 | Msa1289070:CDS | 20.0% |
| !! | AAAAAGTTTGATCTTCAAAT+GGG | - | chr8_3:42671590-42671609 | None:intergenic | 20.0% |
| !! | TAAAAAGTTTGATCTTCAAA+TGG | - | chr8_3:42671591-42671610 | None:intergenic | 20.0% |
| !!! | AAGATCAAACTTTTTACTTT+TGG | + | chr8_3:42671595-42671614 | Msa1289070:CDS | 20.0% |
| !!! | TAATGTGATTTTTTAATGGA+CGG | - | chr8_3:42669860-42669879 | None:intergenic | 20.0% |
| !!! | ATTAAGGACGTTTTTTTTTA+AGG | + | chr8_3:42669974-42669993 | Msa1289070:intron | 20.0% |
| !!! | GTAAATAGAATTTTATGTCT+TGG | - | chr8_3:42670107-42670126 | None:intergenic | 20.0% |
| !!! | ATTCAATCTTGATTTTTCAT+TGG | - | chr8_3:42670209-42670228 | None:intergenic | 20.0% |
| !!! | ATACAAAGTTACATTTTCTT+AGG | + | chr8_3:42670252-42670271 | Msa1289070:intron | 20.0% |
| !! | AAACAACAAATTAAAAGAAG+AGG | + | chr8_3:42670671-42670690 | Msa1289070:CDS | 20.0% |
| !!! | CAAGCTTAATCTATTTTTAT+CGG | + | chr8_3:42671010-42671029 | Msa1289070:intron | 20.0% |
| !!! | ATATAATTTTATCCCACTAA+TGG | + | chr8_3:42671238-42671257 | Msa1289070:intron | 20.0% |
| !!! | TAATGGTAAGTGATTAATTT+TGG | + | chr8_3:42671255-42671274 | Msa1289070:intron | 20.0% |
| !!! | TATTTTCCTCTTTTTTTCTT+GGG | - | chr8_3:42671326-42671345 | None:intergenic | 20.0% |
| !!! | TTATTTTCCTCTTTTTTTCT+TGG | - | chr8_3:42671327-42671346 | None:intergenic | 20.0% |
| !! | TTCACAAAATAAAAATGATG+TGG | + | chr8_3:42671377-42671396 | Msa1289070:CDS | 20.0% |
| !! | AAAAAGTTTGATCTTCAAAT+GGG | - | chr8_3:42671590-42671609 | None:intergenic | 20.0% |
| !! | TAAAAAGTTTGATCTTCAAA+TGG | - | chr8_3:42671591-42671610 | None:intergenic | 20.0% |
| !!! | AAGATCAAACTTTTTACTTT+TGG | + | chr8_3:42671595-42671614 | Msa1289070:CDS | 20.0% |
| !!! | TCTGTTTTAAATTGCATGTT+TGG | + | chr8_3:42669747-42669766 | Msa1289070:intron | 25.0% |
| !! | TTGACAAAAGCTACATTTTA+GGG | - | chr8_3:42669802-42669821 | None:intergenic | 25.0% |
| !! | TTTGACAAAAGCTACATTTT+AGG | - | chr8_3:42669803-42669822 | None:intergenic | 25.0% |
| !! | AGCTTTTGTCAAAATTAAAG+CGG | + | chr8_3:42669810-42669829 | Msa1289070:intron | 25.0% |
| ! | TGTTTCCATTAAAAATTTCC+TGG | + | chr8_3:42669940-42669959 | Msa1289070:intron | 25.0% |
| !!! | AAACATCATCTTCTAAAACA+AGG | - | chr8_3:42670185-42670204 | None:intergenic | 25.0% |
| !!! | TGAATCTTGCTCTTTTATTT+TGG | - | chr8_3:42670566-42670585 | None:intergenic | 25.0% |
| !!! | ATCTATTTTTATCGGTCATT+TGG | + | chr8_3:42671018-42671037 | Msa1289070:intron | 25.0% |
| !! | TGTTAATGTTGATAAGTTCT+TGG | - | chr8_3:42671153-42671172 | None:intergenic | 25.0% |
| ! | ATTAATCACTTACCATTAGT+GGG | - | chr8_3:42671253-42671272 | None:intergenic | 25.0% |
| ! | AATTAATCACTTACCATTAG+TGG | - | chr8_3:42671254-42671273 | None:intergenic | 25.0% |
| ! | TATTTCTCTCAAGAAAAGAT+TGG | + | chr8_3:42671299-42671318 | Msa1289070:CDS | 25.0% |
| ! | TTGTGAAATGATATCATCAA+GGG | - | chr8_3:42671364-42671383 | None:intergenic | 25.0% |
| ! | TTTGTGAAATGATATCATCA+AGG | - | chr8_3:42671365-42671384 | None:intergenic | 25.0% |
| !!! | TCTGTTTTAAATTGCATGTT+TGG | + | chr8_3:42669747-42669766 | Msa1289070:intron | 25.0% |
| !! | TTGACAAAAGCTACATTTTA+GGG | - | chr8_3:42669802-42669821 | None:intergenic | 25.0% |
| !! | TTTGACAAAAGCTACATTTT+AGG | - | chr8_3:42669803-42669822 | None:intergenic | 25.0% |
| !! | AGCTTTTGTCAAAATTAAAG+CGG | + | chr8_3:42669810-42669829 | Msa1289070:intron | 25.0% |
| ! | TGTTTCCATTAAAAATTTCC+TGG | + | chr8_3:42669940-42669959 | Msa1289070:intron | 25.0% |
| !!! | AAACATCATCTTCTAAAACA+AGG | - | chr8_3:42670185-42670204 | None:intergenic | 25.0% |
| !!! | TGAATCTTGCTCTTTTATTT+TGG | - | chr8_3:42670566-42670585 | None:intergenic | 25.0% |
| !!! | ATCTATTTTTATCGGTCATT+TGG | + | chr8_3:42671018-42671037 | Msa1289070:intron | 25.0% |
| !! | TGTTAATGTTGATAAGTTCT+TGG | - | chr8_3:42671153-42671172 | None:intergenic | 25.0% |
| ! | ATTAATCACTTACCATTAGT+GGG | - | chr8_3:42671253-42671272 | None:intergenic | 25.0% |
| ! | AATTAATCACTTACCATTAG+TGG | - | chr8_3:42671254-42671273 | None:intergenic | 25.0% |
| ! | TATTTCTCTCAAGAAAAGAT+TGG | + | chr8_3:42671299-42671318 | Msa1289070:CDS | 25.0% |
| ! | TTGTGAAATGATATCATCAA+GGG | - | chr8_3:42671364-42671383 | None:intergenic | 25.0% |
| ! | TTTGTGAAATGATATCATCA+AGG | - | chr8_3:42671365-42671384 | None:intergenic | 25.0% |
| ! | TGCAGATGAAGTTTTCTTTT+TGG | + | chr8_3:42669687-42669706 | Msa1289070:intron | 30.0% |
| ! | TTTTGGTCAAAAACAGAAGT+TGG | + | chr8_3:42669704-42669723 | Msa1289070:intron | 30.0% |
| AAACAGAAGTTGGATTCTTA+TGG | + | chr8_3:42669714-42669733 | Msa1289070:intron | 30.0% | |
| ! | AAATTGCATGTTTGGAATCA+TGG | + | chr8_3:42669755-42669774 | Msa1289070:intron | 30.0% |
| !! | AAAAAAAGGGTCTTGTTAAC+TGG | - | chr8_3:42670158-42670177 | None:intergenic | 30.0% |
| ! | AAGTTACATTTTCTTAGGCT+TGG | + | chr8_3:42670257-42670276 | Msa1289070:intron | 30.0% |
| CACAACATTAACCATAGAAT+TGG | - | chr8_3:42670292-42670311 | None:intergenic | 30.0% | |
| ATGGTTAATGTTGTGAATGT+TGG | + | chr8_3:42670297-42670316 | Msa1289070:CDS | 30.0% | |
| TTCTTTCTCAAAAGCTTGAA+AGG | - | chr8_3:42670349-42670368 | None:intergenic | 30.0% | |
| ! | CAGATTTTACATTTTGCACA+GGG | - | chr8_3:42671116-42671135 | None:intergenic | 30.0% |
| ! | ACAGATTTTACATTTTGCAC+AGG | - | chr8_3:42671117-42671136 | None:intergenic | 30.0% |
| TGGTACAACTTTCTTATTAC+AGG | + | chr8_3:42671275-42671294 | Msa1289070:intron | 30.0% | |
| TCTTCAACTTTAGGTATGAA+TGG | - | chr8_3:42671519-42671538 | None:intergenic | 30.0% | |
| ATACCTAAAGTTGAAGATGT+TGG | + | chr8_3:42671522-42671541 | Msa1289070:CDS | 30.0% | |
| TACTAGTGGAATGTTAATGT+TGG | + | chr8_3:42671635-42671654 | Msa1289070:three_prime_UTR | 30.0% | |
| ! | TGCAGATGAAGTTTTCTTTT+TGG | + | chr8_3:42669687-42669706 | Msa1289070:intron | 30.0% |
| ! | TTTTGGTCAAAAACAGAAGT+TGG | + | chr8_3:42669704-42669723 | Msa1289070:intron | 30.0% |
| AAACAGAAGTTGGATTCTTA+TGG | + | chr8_3:42669714-42669733 | Msa1289070:intron | 30.0% | |
| ! | AAATTGCATGTTTGGAATCA+TGG | + | chr8_3:42669755-42669774 | Msa1289070:intron | 30.0% |
| !! | AAAAAAAGGGTCTTGTTAAC+TGG | - | chr8_3:42670158-42670177 | None:intergenic | 30.0% |
| ! | AAGTTACATTTTCTTAGGCT+TGG | + | chr8_3:42670257-42670276 | Msa1289070:intron | 30.0% |
| CACAACATTAACCATAGAAT+TGG | - | chr8_3:42670292-42670311 | None:intergenic | 30.0% | |
| ATGGTTAATGTTGTGAATGT+TGG | + | chr8_3:42670297-42670316 | Msa1289070:CDS | 30.0% | |
| TTCTTTCTCAAAAGCTTGAA+AGG | - | chr8_3:42670349-42670368 | None:intergenic | 30.0% | |
| ! | CAGATTTTACATTTTGCACA+GGG | - | chr8_3:42671116-42671135 | None:intergenic | 30.0% |
| ! | ACAGATTTTACATTTTGCAC+AGG | - | chr8_3:42671117-42671136 | None:intergenic | 30.0% |
| TGGTACAACTTTCTTATTAC+AGG | + | chr8_3:42671275-42671294 | Msa1289070:intron | 30.0% | |
| TCTTCAACTTTAGGTATGAA+TGG | - | chr8_3:42671519-42671538 | None:intergenic | 30.0% | |
| ATACCTAAAGTTGAAGATGT+TGG | + | chr8_3:42671522-42671541 | Msa1289070:CDS | 30.0% | |
| TACTAGTGGAATGTTAATGT+TGG | + | chr8_3:42671635-42671654 | Msa1289070:three_prime_UTR | 30.0% | |
| AATGAATCACCTTGACAAGA+AGG | - | chr8_3:42669578-42669597 | None:intergenic | 35.0% | |
| CAACAATCAAGAAGCTACAA+AGG | - | chr8_3:42669602-42669621 | None:intergenic | 35.0% | |
| GTAGTAAAATGTAGCCGATA+TGG | + | chr8_3:42669892-42669911 | Msa1289070:intron | 35.0% | |
| AAAATGTAGCCGATATGGTT+CGG | + | chr8_3:42669897-42669916 | Msa1289070:intron | 35.0% | |
| ! | TTGGGCCAGGAAATTTTTAA+TGG | - | chr8_3:42669948-42669967 | None:intergenic | 35.0% |
| AACGTCCTTAATCGTGAATT+GGG | - | chr8_3:42669966-42669985 | None:intergenic | 35.0% | |
| AAACGTCCTTAATCGTGAAT+TGG | - | chr8_3:42669967-42669986 | None:intergenic | 35.0% | |
| ! | ATTTTCTTAGGCTTGGATTC+AGG | + | chr8_3:42670264-42670283 | Msa1289070:intron | 35.0% |
| TTACGATGATGAGAACTATG+AGG | + | chr8_3:42670383-42670402 | Msa1289070:CDS | 35.0% | |
| AAAACAAGCTTGAACCTGAA+AGG | + | chr8_3:42670484-42670503 | Msa1289070:CDS | 35.0% | |
| AAGGAAAGTTCAACTTGCAA+AGG | + | chr8_3:42670503-42670522 | Msa1289070:CDS | 35.0% | |
| CAAAACCAAACAGCTAGAAA+AGG | + | chr8_3:42670584-42670603 | Msa1289070:CDS | 35.0% | |
| !!! | ATAGTCCTTTTCTAGCTGTT+TGG | - | chr8_3:42670592-42670611 | None:intergenic | 35.0% |
| AAACAGCTAGAAAAGGACTA+TGG | + | chr8_3:42670591-42670610 | Msa1289070:CDS | 35.0% | |
| TCAGTGCTATATATGCTTGA+TGG | - | chr8_3:42670747-42670766 | None:intergenic | 35.0% | |
| ATTGGTCCCAAGAAAAAAAG+AGG | + | chr8_3:42671317-42671336 | Msa1289070:CDS | 35.0% | |
| ! | TGTGAAAATTCTGACTGGTT+TGG | - | chr8_3:42671456-42671475 | None:intergenic | 35.0% |
| CATCTTGTGAAAATTCTGAC+TGG | - | chr8_3:42671461-42671480 | None:intergenic | 35.0% | |
| CATCCAACATCTTCAACTTT+AGG | - | chr8_3:42671528-42671547 | None:intergenic | 35.0% | |
| TATTGAGTCAGTACTACTAG+TGG | + | chr8_3:42671621-42671640 | Msa1289070:exon | 35.0% | |
| ATAAAGCTTCTCATCTTCCA+TGG | - | chr8_3:42669453-42669472 | None:intergenic | 35.0% | |
| AATGAATCACCTTGACAAGA+AGG | - | chr8_3:42669578-42669597 | None:intergenic | 35.0% | |
| CAACAATCAAGAAGCTACAA+AGG | - | chr8_3:42669602-42669621 | None:intergenic | 35.0% | |
| GTAGTAAAATGTAGCCGATA+TGG | + | chr8_3:42669892-42669911 | Msa1289070:intron | 35.0% | |
| AAAATGTAGCCGATATGGTT+CGG | + | chr8_3:42669897-42669916 | Msa1289070:intron | 35.0% | |
| ! | TTGGGCCAGGAAATTTTTAA+TGG | - | chr8_3:42669948-42669967 | None:intergenic | 35.0% |
| AACGTCCTTAATCGTGAATT+GGG | - | chr8_3:42669966-42669985 | None:intergenic | 35.0% | |
| AAACGTCCTTAATCGTGAAT+TGG | - | chr8_3:42669967-42669986 | None:intergenic | 35.0% | |
| ! | ATTTTCTTAGGCTTGGATTC+AGG | + | chr8_3:42670264-42670283 | Msa1289070:intron | 35.0% |
| TTACGATGATGAGAACTATG+AGG | + | chr8_3:42670383-42670402 | Msa1289070:CDS | 35.0% | |
| AAAACAAGCTTGAACCTGAA+AGG | + | chr8_3:42670484-42670503 | Msa1289070:CDS | 35.0% | |
| AAGGAAAGTTCAACTTGCAA+AGG | + | chr8_3:42670503-42670522 | Msa1289070:CDS | 35.0% | |
| CAAAACCAAACAGCTAGAAA+AGG | + | chr8_3:42670584-42670603 | Msa1289070:CDS | 35.0% | |
| !!! | ATAGTCCTTTTCTAGCTGTT+TGG | - | chr8_3:42670592-42670611 | None:intergenic | 35.0% |
| AAACAGCTAGAAAAGGACTA+TGG | + | chr8_3:42670591-42670610 | Msa1289070:CDS | 35.0% | |
| TCAGTGCTATATATGCTTGA+TGG | - | chr8_3:42670747-42670766 | None:intergenic | 35.0% | |
| ATTGGTCCCAAGAAAAAAAG+AGG | + | chr8_3:42671317-42671336 | Msa1289070:CDS | 35.0% | |
| ! | TGTGAAAATTCTGACTGGTT+TGG | - | chr8_3:42671456-42671475 | None:intergenic | 35.0% |
| CATCTTGTGAAAATTCTGAC+TGG | - | chr8_3:42671461-42671480 | None:intergenic | 35.0% | |
| CATCCAACATCTTCAACTTT+AGG | - | chr8_3:42671528-42671547 | None:intergenic | 35.0% | |
| TATTGAGTCAGTACTACTAG+TGG | + | chr8_3:42671621-42671640 | Msa1289070:exon | 35.0% | |
| AGCTCAAAACCTTCTTGTCA+AGG | + | chr8_3:42669566-42669585 | Msa1289070:CDS | 40.0% | |
| ! | TTGCATGTTTGGAATCATGG+TGG | + | chr8_3:42669758-42669777 | Msa1289070:intron | 40.0% |
| TAATCGTGACCGAACCATAT+CGG | - | chr8_3:42669909-42669928 | None:intergenic | 40.0% | |
| TTGGTACTTAACCAATGCCT+CGG | - | chr8_3:42670019-42670038 | None:intergenic | 40.0% | |
| ! | GGATTCAGGTTCCAATTCTA+TGG | + | chr8_3:42670278-42670297 | Msa1289070:CDS | 40.0% |
| !! | TGTTGTGAATGTTGGTGACA+TGG | + | chr8_3:42670305-42670324 | Msa1289070:CDS | 40.0% |
| !! | GTTGTGAATGTTGGTGACAT+GGG | + | chr8_3:42670306-42670325 | Msa1289070:CDS | 40.0% |
| !!! | TGTGAGCCTCCTTTTTTTAC+CGG | - | chr8_3:42670424-42670443 | None:intergenic | 40.0% |
| ! | GCAAGTTGAACTTTCCTTTC+AGG | - | chr8_3:42670501-42670520 | None:intergenic | 40.0% |
| AACCATATAGCCACTTGTCT+TGG | - | chr8_3:42670543-42670562 | None:intergenic | 40.0% | |
| TGGAAACCAATCCTTAGTTG+TGG | + | chr8_3:42671428-42671447 | Msa1289070:CDS | 40.0% | |
| TTGGTTCCACAACTAAGGAT+TGG | - | chr8_3:42671437-42671456 | None:intergenic | 40.0% | |
| ! | ATGGAACAGTCAAGAGGTTT+TGG | - | chr8_3:42671500-42671519 | None:intergenic | 40.0% |
| GTATGAATGGAACAGTCAAG+AGG | - | chr8_3:42671506-42671525 | None:intergenic | 40.0% | |
| AAGCTACAGCAACTTTCATG+TGG | - | chr8_3:42671561-42671580 | None:intergenic | 40.0% | |
| AGCTCAAAACCTTCTTGTCA+AGG | + | chr8_3:42669566-42669585 | Msa1289070:CDS | 40.0% | |
| ! | TTGCATGTTTGGAATCATGG+TGG | + | chr8_3:42669758-42669777 | Msa1289070:intron | 40.0% |
| TAATCGTGACCGAACCATAT+CGG | - | chr8_3:42669909-42669928 | None:intergenic | 40.0% | |
| TTGGTACTTAACCAATGCCT+CGG | - | chr8_3:42670019-42670038 | None:intergenic | 40.0% | |
| ! | GGATTCAGGTTCCAATTCTA+TGG | + | chr8_3:42670278-42670297 | Msa1289070:CDS | 40.0% |
| !! | TGTTGTGAATGTTGGTGACA+TGG | + | chr8_3:42670305-42670324 | Msa1289070:CDS | 40.0% |
| !! | GTTGTGAATGTTGGTGACAT+GGG | + | chr8_3:42670306-42670325 | Msa1289070:CDS | 40.0% |
| !!! | TGTGAGCCTCCTTTTTTTAC+CGG | - | chr8_3:42670424-42670443 | None:intergenic | 40.0% |
| ! | GCAAGTTGAACTTTCCTTTC+AGG | - | chr8_3:42670501-42670520 | None:intergenic | 40.0% |
| AACCATATAGCCACTTGTCT+TGG | - | chr8_3:42670543-42670562 | None:intergenic | 40.0% | |
| TGGAAACCAATCCTTAGTTG+TGG | + | chr8_3:42671428-42671447 | Msa1289070:CDS | 40.0% | |
| TTGGTTCCACAACTAAGGAT+TGG | - | chr8_3:42671437-42671456 | None:intergenic | 40.0% | |
| ! | ATGGAACAGTCAAGAGGTTT+TGG | - | chr8_3:42671500-42671519 | None:intergenic | 40.0% |
| GTATGAATGGAACAGTCAAG+AGG | - | chr8_3:42671506-42671525 | None:intergenic | 40.0% | |
| AAGCTACAGCAACTTTCATG+TGG | - | chr8_3:42671561-42671580 | None:intergenic | 40.0% | |
| TGGTACTTAACCAATGCCTC+GGG | - | chr8_3:42670018-42670037 | None:intergenic | 45.0% | |
| TGCACCAACCCGGTAAAAAA+AGG | + | chr8_3:42670412-42670431 | Msa1289070:CDS | 45.0% | |
| ACCAACCCGGTAAAAAAAGG+AGG | + | chr8_3:42670415-42670434 | Msa1289070:CDS | 45.0% | |
| !!! | GTGAGCCTCCTTTTTTTACC+GGG | - | chr8_3:42670423-42670442 | None:intergenic | 45.0% |
| AGCCAAGACAAGTGGCTATA+TGG | + | chr8_3:42670538-42670557 | Msa1289070:CDS | 45.0% | |
| GAATGCCTACAGAACACTGA+TGG | + | chr8_3:42671408-42671427 | Msa1289070:CDS | 45.0% | |
| GGTTTCCATCAGTGTTCTGT+AGG | - | chr8_3:42671416-42671435 | None:intergenic | 45.0% | |
| !! | CTGGTTTGGTTCCACAACTA+AGG | - | chr8_3:42671442-42671461 | None:intergenic | 45.0% |
| !!! | CAGTCAAGAGGTTTTGGCTT+AGG | - | chr8_3:42671494-42671513 | None:intergenic | 45.0% |
| TGGTACTTAACCAATGCCTC+GGG | - | chr8_3:42670018-42670037 | None:intergenic | 45.0% | |
| TGCACCAACCCGGTAAAAAA+AGG | + | chr8_3:42670412-42670431 | Msa1289070:CDS | 45.0% | |
| ACCAACCCGGTAAAAAAAGG+AGG | + | chr8_3:42670415-42670434 | Msa1289070:CDS | 45.0% | |
| !!! | GTGAGCCTCCTTTTTTTACC+GGG | - | chr8_3:42670423-42670442 | None:intergenic | 45.0% |
| AGCCAAGACAAGTGGCTATA+TGG | + | chr8_3:42670538-42670557 | Msa1289070:CDS | 45.0% | |
| GAATGCCTACAGAACACTGA+TGG | + | chr8_3:42671408-42671427 | Msa1289070:CDS | 45.0% | |
| GGTTTCCATCAGTGTTCTGT+AGG | - | chr8_3:42671416-42671435 | None:intergenic | 45.0% | |
| !! | CTGGTTTGGTTCCACAACTA+AGG | - | chr8_3:42671442-42671461 | None:intergenic | 45.0% |
| !!! | CAGTCAAGAGGTTTTGGCTT+AGG | - | chr8_3:42671494-42671513 | None:intergenic | 45.0% |
| TCGACAAGCTCAGAAGAGCA+TGG | - | chr8_3:42669524-42669543 | None:intergenic | 50.0% | |
| TGAGCTTGTCGAGTCTCTCT+TGG | + | chr8_3:42669532-42669551 | Msa1289070:CDS | 50.0% | |
| CCTTAATCGTGAATTGGGCC+AGG | - | chr8_3:42669961-42669980 | None:intergenic | 50.0% | |
| CCTGGCCCAATTCACGATTA+AGG | + | chr8_3:42669958-42669977 | Msa1289070:intron | 50.0% | |
| AATGTTAACCAATGCCCCCG+AGG | + | chr8_3:42669999-42670018 | Msa1289070:intron | 50.0% | |
| GTACTTAACCAATGCCTCGG+GGG | - | chr8_3:42670016-42670035 | None:intergenic | 50.0% | |
| GGTACTTAACCAATGCCTCG+GGG | - | chr8_3:42670017-42670036 | None:intergenic | 50.0% | |
| !!! | GCCTCCTTTTTTTACCGGGT+TGG | - | chr8_3:42670419-42670438 | None:intergenic | 50.0% |
| ! | TAGCTTGCAGCCAAGACAAG+TGG | + | chr8_3:42670530-42670549 | Msa1289070:CDS | 50.0% |
| GTCAGTGCCAATGTCATGTC+TGG | + | chr8_3:42670854-42670873 | Msa1289070:intron | 50.0% | |
| ACGAGCACCAGACATGACAT+TGG | - | chr8_3:42670864-42670883 | None:intergenic | 50.0% | |
| TCGACAAGCTCAGAAGAGCA+TGG | - | chr8_3:42669524-42669543 | None:intergenic | 50.0% | |
| TGAGCTTGTCGAGTCTCTCT+TGG | + | chr8_3:42669532-42669551 | Msa1289070:CDS | 50.0% | |
| CCTTAATCGTGAATTGGGCC+AGG | - | chr8_3:42669961-42669980 | None:intergenic | 50.0% | |
| CCTGGCCCAATTCACGATTA+AGG | + | chr8_3:42669958-42669977 | Msa1289070:intron | 50.0% | |
| AATGTTAACCAATGCCCCCG+AGG | + | chr8_3:42669999-42670018 | Msa1289070:intron | 50.0% | |
| GTACTTAACCAATGCCTCGG+GGG | - | chr8_3:42670016-42670035 | None:intergenic | 50.0% | |
| GGTACTTAACCAATGCCTCG+GGG | - | chr8_3:42670017-42670036 | None:intergenic | 50.0% | |
| !!! | GCCTCCTTTTTTTACCGGGT+TGG | - | chr8_3:42670419-42670438 | None:intergenic | 50.0% |
| ! | TAGCTTGCAGCCAAGACAAG+TGG | + | chr8_3:42670530-42670549 | Msa1289070:CDS | 50.0% |
| GTCAGTGCCAATGTCATGTC+TGG | + | chr8_3:42670854-42670873 | Msa1289070:intron | 50.0% | |
| ACGAGCACCAGACATGACAT+TGG | - | chr8_3:42670864-42670883 | None:intergenic | 50.0% | |
| AGATCCCTTAACCAGTGCCC+CGG | + | chr8_3:42670127-42670146 | Msa1289070:intron | 55.0% | |
| TCTTGTTAACTGGTGCCCCC+GGG | - | chr8_3:42670148-42670167 | None:intergenic | 55.0% | |
| ! | GTCTTGTTAACTGGTGCCCC+CGG | - | chr8_3:42670149-42670168 | None:intergenic | 55.0% |
| ! | GAGGTTTGCTTGCACCAACC+CGG | + | chr8_3:42670402-42670421 | Msa1289070:CDS | 55.0% |
| AGATCCCTTAACCAGTGCCC+CGG | + | chr8_3:42670127-42670146 | Msa1289070:intron | 55.0% | |
| TCTTGTTAACTGGTGCCCCC+GGG | - | chr8_3:42670148-42670167 | None:intergenic | 55.0% | |
| ! | GTCTTGTTAACTGGTGCCCC+CGG | - | chr8_3:42670149-42670168 | None:intergenic | 55.0% |
| ! | GAGGTTTGCTTGCACCAACC+CGG | + | chr8_3:42670402-42670421 | Msa1289070:CDS | 55.0% |
| AACCAATGCCCCCGAGGCAT+TGG | + | chr8_3:42670005-42670024 | Msa1289070:intron | 60.0% | |
| ! | AACCAATGCCTCGGGGGCAT+TGG | - | chr8_3:42670010-42670029 | None:intergenic | 60.0% |
| GATCCCTTAACCAGTGCCCC+GGG | + | chr8_3:42670128-42670147 | Msa1289070:intron | 60.0% | |
| ATCCCTTAACCAGTGCCCCG+GGG | + | chr8_3:42670129-42670148 | Msa1289070:intron | 60.0% | |
| CTTGTTAACTGGTGCCCCCG+GGG | - | chr8_3:42670147-42670166 | None:intergenic | 60.0% | |
| AACCAATGCCCCCGAGGCAT+TGG | + | chr8_3:42670005-42670024 | Msa1289070:intron | 60.0% | |
| ! | AACCAATGCCTCGGGGGCAT+TGG | - | chr8_3:42670010-42670029 | None:intergenic | 60.0% |
| GATCCCTTAACCAGTGCCCC+GGG | + | chr8_3:42670128-42670147 | Msa1289070:intron | 60.0% | |
| ATCCCTTAACCAGTGCCCCG+GGG | + | chr8_3:42670129-42670148 | Msa1289070:intron | 60.0% | |
| CTTGTTAACTGGTGCCCCCG+GGG | - | chr8_3:42670147-42670166 | None:intergenic | 60.0% | |
| TCCCTTAACCAGTGCCCCGG+GGG | + | chr8_3:42670130-42670149 | Msa1289070:intron | 65.0% | |
| TCCCTTAACCAGTGCCCCGG+GGG | + | chr8_3:42670130-42670149 | Msa1289070:intron | 65.0% | |
| !! | GCCCCCGGGGCACTGGTTAA+GGG | - | chr8_3:42670134-42670153 | None:intergenic | 70.0% |
| !! | TGCCCCCGGGGCACTGGTTA+AGG | - | chr8_3:42670135-42670154 | None:intergenic | 70.0% |
| !! | GCCCCCGGGGCACTGGTTAA+GGG | - | chr8_3:42670134-42670153 | None:intergenic | 70.0% |
| !! | TGCCCCCGGGGCACTGGTTA+AGG | - | chr8_3:42670135-42670154 | None:intergenic | 70.0% |
| AACTGGTGCCCCCGGGGCAC+TGG | - | chr8_3:42670141-42670160 | None:intergenic | 75.0% | |
| AACTGGTGCCCCCGGGGCAC+TGG | - | chr8_3:42670141-42670160 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 42669452 | 42671768 | 42669452 | ID=Msa1289070;Name=Msa1289070 |
| chr8_3 | mRNA | 42669452 | 42671768 | 42669452 | ID=Msa1289070-mRNA-1;Parent=Msa1289070;Name=Msa1289070-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.5|0.33|1|1|1|3|142|294 |
| chr8_3 | exon | 42669452 | 42669587 | 42669452 | ID=Msa1289070-mRNA-1:exon:11665;Parent=Msa1289070-mRNA-1 |
| chr8_3 | exon | 42670274 | 42670692 | 42670274 | ID=Msa1289070-mRNA-1:exon:11666;Parent=Msa1289070-mRNA-1 |
| chr8_3 | exon | 42671297 | 42671768 | 42671297 | ID=Msa1289070-mRNA-1:exon:11667;Parent=Msa1289070-mRNA-1 |
| chr8_3 | CDS | 42669452 | 42669587 | 42669452 | ID=Msa1289070-mRNA-1:cds;Parent=Msa1289070-mRNA-1 |
| chr8_3 | CDS | 42670274 | 42670692 | 42670274 | ID=Msa1289070-mRNA-1:cds;Parent=Msa1289070-mRNA-1 |
| chr8_3 | CDS | 42671297 | 42671626 | 42671297 | ID=Msa1289070-mRNA-1:cds;Parent=Msa1289070-mRNA-1 |
| chr8_3 | three_prime_UTR | 42671627 | 42671768 | 42671627 | ID=Msa1289070-mRNA-1:three_prime_utr;Parent=Msa1289070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
