Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1289930 | XP_003628618.1 | 98.987 | 395 | 3 | 1 | 1 | 394 | 1 | 395 | 0.0 | 818 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1289930 | sp|P52903|ODPA_SOLTU | 79.949 | 389 | 78 | 0 | 6 | 394 | 3 | 391 | 0.0 | 672 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1289930 | G7LEP9 | 98.987 | 395 | 3 | 1 | 1 | 394 | 1 | 395 | 0.0 | 818 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1289930 | Msa1450990 | 0.854108 | 1.532657e-61 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1289930 | MtrunA17_Chr8g0364201 | 98.987 | 395 | 3 | 1 | 1 | 394 | 1 | 395 | 0.0 | 818 |
Msa1289930 | MtrunA17_Chr5g0414991 | 82.984 | 382 | 63 | 1 | 13 | 394 | 16 | 395 | 0.0 | 654 |
Msa1289930 | MtrunA17_Chr8g0345911 | 35.629 | 421 | 226 | 9 | 6 | 388 | 3 | 416 | 2.52e-81 | 255 |
Msa1289930 | MtrunA17_Chr3g0125611 | 29.231 | 325 | 220 | 4 | 57 | 375 | 119 | 439 | 4.09e-42 | 154 |
Msa1289930 | MtrunA17_Chr3g0130311 | 28.994 | 338 | 218 | 7 | 49 | 373 | 90 | 418 | 7.87e-41 | 150 |
Msa1289930 | MtrunA17_Chr7g0276281 | 38.095 | 84 | 47 | 3 | 223 | 301 | 5 | 88 | 1.49e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1289930 | AT1G24180.1 | 77.834 | 397 | 81 | 4 | 1 | 394 | 1 | 393 | 0.0 | 647 |
Msa1289930 | AT1G59900.1 | 76.396 | 394 | 88 | 3 | 1 | 394 | 1 | 389 | 0.0 | 645 |
Msa1289930 | AT1G59900.2 | 76.579 | 380 | 84 | 3 | 1 | 380 | 1 | 375 | 0.0 | 624 |
Msa1289930 | AT1G01090.1 | 37.306 | 386 | 221 | 9 | 20 | 388 | 36 | 417 | 7.83e-77 | 244 |
Msa1289930 | AT5G09300.2 | 28.399 | 331 | 217 | 6 | 54 | 373 | 49 | 370 | 6.53e-42 | 152 |
Msa1289930 | AT5G09300.1 | 28.399 | 331 | 217 | 6 | 54 | 373 | 120 | 441 | 2.00e-41 | 152 |
Msa1289930 | AT1G21400.4 | 31.148 | 305 | 196 | 5 | 99 | 394 | 72 | 371 | 1.68e-40 | 147 |
Msa1289930 | AT1G21400.2 | 31.148 | 305 | 196 | 5 | 99 | 394 | 72 | 371 | 1.68e-40 | 147 |
Msa1289930 | AT1G21400.3 | 31.148 | 305 | 196 | 5 | 99 | 394 | 89 | 388 | 2.76e-40 | 147 |
Msa1289930 | AT1G21400.1 | 31.148 | 305 | 196 | 5 | 99 | 394 | 164 | 463 | 3.65e-40 | 149 |
Msa1289930 | AT1G21400.5 | 31.148 | 305 | 196 | 5 | 99 | 394 | 216 | 515 | 5.10e-40 | 149 |
Msa1289930 | AT5G09300.3 | 27.935 | 247 | 158 | 6 | 54 | 289 | 120 | 357 | 4.14e-25 | 105 |
Msa1289930 | AT5G34780.1 | 34.043 | 188 | 109 | 5 | 194 | 373 | 31 | 211 | 1.05e-21 | 95.9 |
Msa1289930 | AT5G09300.4 | 27.419 | 186 | 128 | 2 | 54 | 236 | 120 | 301 | 5.98e-20 | 90.5 |
Msa1289930 | AT1G21400.6 | 28.378 | 148 | 103 | 1 | 99 | 243 | 216 | 363 | 7.05e-17 | 81.6 |
Find 155 sgRNAs with CRISPR-Local
Find 670 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATACATTCAGATTGTAATTT+TGG | 0.121623 | 8_3:+44442861 | Msa1289930:three_prime_UTR |
TTGGGATCTTCCTGCTATTT+TGG | 0.127087 | 8_3:+44435004 | Msa1289930:CDS |
TTTACCAATGTATATGTTAA+AGG | 0.140584 | 8_3:+44442314 | Msa1289930:CDS |
CGATAGTTGGTGGCACAATT+TGG | 0.157471 | 8_3:-44434119 | None:intergenic |
ATACGTATACCTTTAGTATT+TGG | 0.159139 | 8_3:+44443222 | Msa1289930:three_prime_UTR |
CTTGGAGTTGGATTGGCTTT+TGG | 0.188485 | 8_3:+44434882 | Msa1289930:CDS |
TTCTACTGAAAAGGAATTAA+AGG | 0.202760 | 8_3:+44441006 | Msa1289930:CDS |
TGAAGAAAAGCAGTCAAATT+AGG | 0.204318 | 8_3:-44434202 | None:intergenic |
AAGGATATAACTATCATTTA+TGG | 0.223145 | 8_3:-44442695 | None:intergenic |
AATCAATAATGAATTAAAAT+AGG | 0.223501 | 8_3:-44442891 | None:intergenic |
TCGTATTGAGGAAAGGAAAT+AGG | 0.238108 | 8_3:-44434403 | None:intergenic |
CTCTTAATATCGCCGCTCTT+TGG | 0.242363 | 8_3:+44434985 | Msa1289930:CDS |
TCAAAATAATGAAGAATAAA+AGG | 0.258180 | 8_3:+44442748 | Msa1289930:three_prime_UTR |
TCAATTATACCCATTCATAT+TGG | 0.266508 | 8_3:+44443033 | Msa1289930:three_prime_UTR |
TACAACTATGTGATGCAAAT+TGG | 0.285791 | 8_3:+44442919 | Msa1289930:three_prime_UTR |
TGGTGATGGTGCTGCTAATC+AGG | 0.297061 | 8_3:+44434947 | Msa1289930:CDS |
GGTTTCGACGGTTAGGGTTT+CGG | 0.303370 | 8_3:-44434451 | None:intergenic |
CAATTATACCCATTCATATT+GGG | 0.303429 | 8_3:+44443034 | Msa1289930:three_prime_UTR |
CCTTTAGTATTTGGATCATC+TGG | 0.305515 | 8_3:+44443231 | Msa1289930:three_prime_UTR |
AAACAATTTAATATACAATT+AGG | 0.305991 | 8_3:-44442815 | None:intergenic |
GATAGTTGGTGGCACAATTT+GGG | 0.308408 | 8_3:-44434118 | None:intergenic |
GAAGAAAAGCAGTCAAATTA+GGG | 0.322429 | 8_3:-44434201 | None:intergenic |
TTGTTTCTTGAATAGCAATA+TGG | 0.325388 | 8_3:+44442832 | Msa1289930:three_prime_UTR |
ATCAATAATGAATTAAAATA+GGG | 0.333881 | 8_3:-44442890 | None:intergenic |
GGATGGAGGTTTCGACGGTT+AGG | 0.337250 | 8_3:-44434458 | None:intergenic |
AATGTATATGTTAAAGGCTT+AGG | 0.339639 | 8_3:+44442320 | Msa1289930:CDS |
TCTTAATATCGCCGCTCTTT+GGG | 0.347641 | 8_3:+44434986 | Msa1289930:CDS |
AGCTTTCTTACTCTCTCAAT+TGG | 0.359233 | 8_3:-44440965 | None:intergenic |
GATTCTTCTTCTTCTATGAA+TGG | 0.362537 | 8_3:-44434161 | None:intergenic |
GCAGAAACCGCGGATGAGTT+TGG | 0.369250 | 8_3:-44434610 | None:intergenic |
ATTTACTTTGTACAGGTAGA+TGG | 0.383832 | 8_3:+44436738 | Msa1289930:intron |
TTCTTAATACCCAATATGAA+TGG | 0.392399 | 8_3:-44443043 | None:intergenic |
ATGTATATGTTAAAGGCTTA+GGG | 0.394667 | 8_3:+44442321 | Msa1289930:CDS |
GTTGGAGCTCAGATTCCTCT+TGG | 0.398329 | 8_3:+44434864 | Msa1289930:CDS |
GATTCCTCTTGGAGTTGGAT+TGG | 0.401098 | 8_3:+44434875 | Msa1289930:CDS |
TGGCCACTCCATGTCTGATC+CGG | 0.401479 | 8_3:+44440804 | Msa1289930:CDS |
CTTGTAATACGCAGGACTTT+TGG | 0.405631 | 8_3:-44435162 | None:intergenic |
TAATGTCCAGATTCTTGAAA+TGG | 0.407066 | 8_3:+44440765 | Msa1289930:intron |
TATGGTGGACATGGGATTGT+TGG | 0.408224 | 8_3:+44434846 | Msa1289930:CDS |
TGGAAGGTGGTTCGCAGTTG+TGG | 0.409089 | 8_3:-44434491 | None:intergenic |
ATATGGTTATACCTTTGCTT+TGG | 0.412121 | 8_3:-44442159 | None:intergenic |
GCTCAGATTCCTCTTGGAGT+TGG | 0.414889 | 8_3:+44434870 | Msa1289930:CDS |
CTTTGTACAGGTAGATGGTA+TGG | 0.416779 | 8_3:+44436743 | Msa1289930:intron |
CAGATCATCTCTCTGCCTAT+TGG | 0.417912 | 8_3:+44442782 | Msa1289930:three_prime_UTR |
CGTATTGAGGAAAGGAAATA+GGG | 0.419858 | 8_3:-44434402 | None:intergenic |
AAATTACAATCTGAATGTAT+AGG | 0.425071 | 8_3:-44442858 | None:intergenic |
GAGCCATTTGGATCTGATAC+TGG | 0.425360 | 8_3:-44434335 | None:intergenic |
GATGGAGGTTTCGACGGTTA+GGG | 0.431680 | 8_3:-44434457 | None:intergenic |
TTAGGCAAAGCTTCACCAAT+AGG | 0.439371 | 8_3:-44442797 | None:intergenic |
TTGAATTGAATTGAATTGAA+TGG | 0.442147 | 8_3:-44434295 | None:intergenic |
GGTTAGGGTTTCGGTGGAAG+AGG | 0.446559 | 8_3:-44434442 | None:intergenic |
GATTTCAATTTGTAGAGGTT+AGG | 0.453825 | 8_3:-44434225 | None:intergenic |
TGAGTTCGGAGGCGGTGGTT+TGG | 0.454095 | 8_3:-44434521 | None:intergenic |
GTGGTTTGGACGGTGGTGGA+AGG | 0.454242 | 8_3:-44434507 | None:intergenic |
AAGCGTGGAGATTATGCTCC+TGG | 0.457396 | 8_3:+44435182 | Msa1289930:CDS |
TTCGGAGGCGGTGGTTTGGA+CGG | 0.457880 | 8_3:-44434517 | None:intergenic |
AGATTATGCTCCTGGATTGA+AGG | 0.459060 | 8_3:+44435190 | Msa1289930:CDS |
TTAGTTGTGAGATAAGATTA+TGG | 0.459938 | 8_3:-44434053 | None:intergenic |
CTGCCATCTCTACGACGGTC+AGG | 0.461075 | 8_3:+44434629 | Msa1289930:CDS |
ATCTTTCTAACCTTCAATCC+AGG | 0.464660 | 8_3:-44435200 | None:intergenic |
TTCGGTGGAAGAGGAAGAAA+TGG | 0.466080 | 8_3:-44434433 | None:intergenic |
GGAAGGTGGTTCGCAGTTGT+GGG | 0.469466 | 8_3:-44434490 | None:intergenic |
GGCGGTGGTTTGGACGGTGG+TGG | 0.470193 | 8_3:-44434511 | None:intergenic |
TACAAAGCAAAAGTAACATT+GGG | 0.474957 | 8_3:-44434924 | None:intergenic |
CGATTCTCATCCTCTCAATT+CGG | 0.478801 | 8_3:+44434363 | Msa1289930:CDS |
CATGGAACCACCTTTCCCCT+TGG | 0.480315 | 8_3:-44434796 | None:intergenic |
TCTTAATACCCAATATGAAT+GGG | 0.481557 | 8_3:-44443042 | None:intergenic |
TCACGACATTTCTACTGAAA+AGG | 0.484619 | 8_3:+44440997 | Msa1289930:CDS |
CAATAATTAAATCTGCAAAC+AGG | 0.485413 | 8_3:-44443101 | None:intergenic |
GAATTGATGGGAAGGAAAGA+TGG | 0.489679 | 8_3:+44434768 | Msa1289930:CDS |
TTATACCTTTGCTTTGGCAA+TGG | 0.489696 | 8_3:-44442153 | None:intergenic |
GAGAGTAAGAAAGCTGGTAT+TGG | 0.491864 | 8_3:+44440973 | Msa1289930:CDS |
CGCAGTTGTGGGAAGTGAAA+GGG | 0.491966 | 8_3:-44434479 | None:intergenic |
ATTTGTGTAACAGATGGAAT+GGG | 0.492493 | 8_3:+44435119 | Msa1289930:intron |
AAGGAACATGCTTTGAAGAA+TGG | 0.493732 | 8_3:+44436801 | Msa1289930:CDS |
GGACATGAGTTCGGAGGCGG+TGG | 0.495990 | 8_3:-44434526 | None:intergenic |
TGAGATTAGCGGTGTTAGAC+AGG | 0.497125 | 8_3:+44440849 | Msa1289930:CDS |
AGAATCGCGATAGAGCCATT+TGG | 0.497663 | 8_3:-44434347 | None:intergenic |
GATTTGTGTAACAGATGGAA+TGG | 0.503553 | 8_3:+44435118 | Msa1289930:intron |
CGCGTGCGGTATGTGCTGCC+CGG | 0.506711 | 8_3:-44440823 | None:intergenic |
AATGGAACGGTGTCGTATTG+AGG | 0.512155 | 8_3:-44434415 | None:intergenic |
GAGAACCATGTCGTTGAAGA+AGG | 0.516045 | 8_3:-44434547 | None:intergenic |
ACATTGGTAAATAGATCAGA+TGG | 0.517521 | 8_3:-44442302 | None:intergenic |
TGAGGACGCTATTCGATAGT+TGG | 0.518037 | 8_3:-44434132 | None:intergenic |
GGCCACTCCATGTCTGATCC+GGG | 0.519101 | 8_3:+44440805 | Msa1289930:CDS |
TTCTCACAAACCAAAATAGC+AGG | 0.519315 | 8_3:-44435014 | None:intergenic |
GTAAATAGATCAGATGGGTC+TGG | 0.522363 | 8_3:-44442296 | None:intergenic |
GTTTGCAGATTTAATTATTG+AGG | 0.522961 | 8_3:+44443104 | Msa1289930:three_prime_UTR |
TGCAGGCATGTGGTGCTGAT+AGG | 0.523890 | 8_3:+44442651 | Msa1289930:intron |
TGAATGTGTTTCACAATTGG+TGG | 0.527186 | 8_3:+44442967 | Msa1289930:three_prime_UTR |
GTTGAAGAAGGACATGAGTT+CGG | 0.527595 | 8_3:-44434535 | None:intergenic |
GGTCAGGAAGCCGTTGCTGT+TGG | 0.530115 | 8_3:+44434645 | Msa1289930:CDS |
GTTTGGACGGTGGTGGAAGG+TGG | 0.531937 | 8_3:-44434504 | None:intergenic |
ATACAAAGCAAAAGTAACAT+TGG | 0.535697 | 8_3:-44434925 | None:intergenic |
CATGGTTCTCATGCGCCGTA+TGG | 0.536252 | 8_3:+44434560 | Msa1289930:CDS |
AGGAAAGATGGGTGTTCCAA+GGG | 0.540079 | 8_3:+44434780 | Msa1289930:CDS |
GGAAGCCGTTGCTGTTGGAA+TGG | 0.541582 | 8_3:+44434650 | Msa1289930:CDS |
TCGCAGTTGTGGGAAGTGAA+AGG | 0.544039 | 8_3:-44434480 | None:intergenic |
AAGGAAAGATGGGTGTTCCA+AGG | 0.549770 | 8_3:+44434779 | Msa1289930:CDS |
CCAGATGATCCAAATACTAA+AGG | 0.555283 | 8_3:-44443231 | None:intergenic |
GTGGGAAGTGAAAGGGATGG+AGG | 0.555368 | 8_3:-44434472 | None:intergenic |
TGTTAAAGGCTTAGGGGTCG+AGG | 0.557159 | 8_3:+44442328 | Msa1289930:CDS |
TTTCCAGTATCAGATCCAAA+TGG | 0.564434 | 8_3:+44434332 | Msa1289930:exon |
CAACGGAAGAAGACGCTCAA+AGG | 0.567612 | 8_3:-44442714 | None:intergenic |
GGAGGCGGTGGTTTGGACGG+TGG | 0.567848 | 8_3:-44434514 | None:intergenic |
TAAGCCTTTAACATATACAT+TGG | 0.568328 | 8_3:-44442318 | None:intergenic |
CTTCCTGACCGTCGTAGAGA+TGG | 0.569109 | 8_3:-44434632 | None:intergenic |
TGCTTTGAAGAATGGTCCCC+TGG | 0.570115 | 8_3:+44436809 | Msa1289930:CDS |
AAAGGAAATAGGGTTTGAGA+AGG | 0.572428 | 8_3:-44434392 | None:intergenic |
GGGTGTTCCAAGGGGAAAGG+TGG | 0.573684 | 8_3:+44434789 | Msa1289930:CDS |
CATGTCCTTCTTCAACGACA+TGG | 0.574969 | 8_3:+44434542 | Msa1289930:CDS |
GAAGGACATGAGTTCGGAGG+CGG | 0.576411 | 8_3:-44434529 | None:intergenic |
AAGGAAATAGGGTTTGAGAA+GGG | 0.576534 | 8_3:-44434391 | None:intergenic |
AGCTTCCATTCCAACAGCAA+CGG | 0.577026 | 8_3:-44434655 | None:intergenic |
GAAAGGGATGGAGGTTTCGA+CGG | 0.581945 | 8_3:-44434463 | None:intergenic |
GATTAGATTTCAATTTGTAG+AGG | 0.582306 | 8_3:-44434230 | None:intergenic |
GATCAGACATGGAGTGGCCA+TGG | 0.584534 | 8_3:-44440801 | None:intergenic |
GAAATAGGGTTTGAGAAGGG+TGG | 0.590452 | 8_3:-44434388 | None:intergenic |
TTCGACGGTTAGGGTTTCGG+TGG | 0.592878 | 8_3:-44434448 | None:intergenic |
AATTGATGGGAAGGAAAGAT+GGG | 0.593176 | 8_3:+44434769 | Msa1289930:CDS |
TGTGCTGCCCGGATCAGACA+TGG | 0.594191 | 8_3:-44440812 | None:intergenic |
GATGGGTGTTCCAAGGGGAA+AGG | 0.595669 | 8_3:+44434786 | Msa1289930:CDS |
CGAAGCCATTGCCAAAGCAA+AGG | 0.598171 | 8_3:+44442148 | Msa1289930:CDS |
AATTGAGAGAGTAAGAAAGC+TGG | 0.598823 | 8_3:+44440967 | Msa1289930:CDS |
TGCCCGGATCAGACATGGAG+TGG | 0.600111 | 8_3:-44440807 | None:intergenic |
GCAAGCTTGCAAATTTGCAA+AGG | 0.602106 | 8_3:+44436782 | Msa1289930:CDS |
GGTGATGGTGCTGCTAATCA+GGG | 0.617038 | 8_3:+44434948 | Msa1289930:CDS |
TATGTCTAGACAATTGAACT+AGG | 0.617255 | 8_3:-44443181 | None:intergenic |
ATAGTTGGTGGCACAATTTG+GGG | 0.619792 | 8_3:-44434117 | None:intergenic |
TTCTATGAATGGAAAGAGTG+AGG | 0.627402 | 8_3:-44434150 | None:intergenic |
AGTCAGCAGCGATCTCCATA+CGG | 0.627581 | 8_3:-44434575 | None:intergenic |
AACGGTGTCGTATTGAGGAA+AGG | 0.627993 | 8_3:-44434410 | None:intergenic |
TTTCTTGAATAGCAATATGG+CGG | 0.629358 | 8_3:+44442835 | Msa1289930:three_prime_UTR |
AGTACAGTGATCACGATAAG+CGG | 0.629898 | 8_3:-44434706 | None:intergenic |
CGCACGCGTGATGAGATTAG+CGG | 0.635779 | 8_3:+44440838 | Msa1289930:CDS |
CGCTAATCTCATCACGCGTG+CGG | 0.639390 | 8_3:-44440837 | None:intergenic |
AAGGGTGGATCCGAATTGAG+AGG | 0.642462 | 8_3:-44434373 | None:intergenic |
ATGGACACTTACAGATACCA+TGG | 0.644817 | 8_3:+44440784 | Msa1289930:CDS |
AGTCCTGCGTATTACAAGCG+TGG | 0.644994 | 8_3:+44435167 | Msa1289930:CDS |
AAAGCCAATCCAACTCCAAG+AGG | 0.648911 | 8_3:-44434879 | None:intergenic |
GGACGCTATTCGATAGTTGG+TGG | 0.650764 | 8_3:-44434129 | None:intergenic |
CGTAGAGATGGCAGAAACCG+CGG | 0.660828 | 8_3:-44434620 | None:intergenic |
CATTGGTAAATAGATCAGAT+GGG | 0.666454 | 8_3:-44442301 | None:intergenic |
TACAAAGCCAAACTCATCCG+CGG | 0.667143 | 8_3:+44434603 | Msa1289930:CDS |
TGTATATGTTAAAGGCTTAG+GGG | 0.667239 | 8_3:+44442322 | Msa1289930:CDS |
ATGGAATGGGGACTGCTGAG+TGG | 0.670807 | 8_3:+44435132 | Msa1289930:CDS |
TGGAAGAGGAAGAAATGGAA+CGG | 0.671358 | 8_3:-44434428 | None:intergenic |
TCTCCACGCTTGTAATACGC+AGG | 0.672536 | 8_3:-44435170 | None:intergenic |
AGCAGGAAGATCCCAAAGAG+CGG | 0.675016 | 8_3:-44434997 | None:intergenic |
GGAAAGATGGGTGTTCCAAG+GGG | 0.677477 | 8_3:+44434781 | Msa1289930:CDS |
GAAGAAGGACATGAGTTCGG+AGG | 0.678757 | 8_3:-44434532 | None:intergenic |
GTTGTGGGAAGTGAAAGGGA+TGG | 0.697878 | 8_3:-44434475 | None:intergenic |
GGTTTCTGCCATCTCTACGA+CGG | 0.718050 | 8_3:+44434624 | Msa1289930:CDS |
TTTGTGTAACAGATGGAATG+GGG | 0.720617 | 8_3:+44435120 | Msa1289930:intron |
AAGAAAAGCAGTCAAATTAG+GGG | 0.724834 | 8_3:-44434200 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAAAAAAAAAAAAATTA+TGG | - | chr8_3:44434022-44434041 | None:intergenic | 0.0% |
!!! | AATTTTTTTTTTTTTTATTA+AGG | + | chr8_3:44434023-44434042 | Msa1289930:intron | 0.0% |
!! | TTATTCATAAAATTTCAAAA+GGG | - | chr8_3:44436714-44436733 | None:intergenic | 10.0% |
!! | TTTATTCATAAAATTTCAAA+AGG | - | chr8_3:44436715-44436734 | None:intergenic | 10.0% |
!!! | TTATATCAATTTTAATTGAA+AGG | + | chr8_3:44439977-44439996 | Msa1289930:intron | 10.0% |
!! | TATTCAAATTTATTAAACAT+CGG | - | chr8_3:44442410-44442429 | None:intergenic | 10.0% |
!! | AAACAATTTAATATACAATT+AGG | - | chr8_3:44442818-44442837 | None:intergenic | 10.0% |
!! | ATCAATAATGAATTAAAATA+GGG | - | chr8_3:44442893-44442912 | None:intergenic | 10.0% |
!! | AATCAATAATGAATTAAAAT+AGG | - | chr8_3:44442894-44442913 | None:intergenic | 10.0% |
!!! | TTAAGAAATCATATTATTTT+TGG | + | chr8_3:44443059-44443078 | Msa1289930:three_prime_UTR | 10.0% |
!!! | AAATTCATAATGATATTTTG+AGG | + | chr8_3:44435657-44435676 | Msa1289930:intron | 15.0% |
!!! | TTTTAACTTGATTTTAATGT+TGG | + | chr8_3:44436240-44436259 | Msa1289930:intron | 15.0% |
!! | TTAATATCCACAAAATTAAA+TGG | - | chr8_3:44437102-44437121 | None:intergenic | 15.0% |
!! | AGAAGATTAAATAATTTACA+AGG | - | chr8_3:44437185-44437204 | None:intergenic | 15.0% |
!! | TTGTAATTATACTATTAGTT+TGG | - | chr8_3:44437937-44437956 | None:intergenic | 15.0% |
!! | AACTAATAGTATAATTACAA+TGG | + | chr8_3:44437937-44437956 | Msa1289930:intron | 15.0% |
!! | ACTAATAGTATAATTACAAT+GGG | + | chr8_3:44437938-44437957 | Msa1289930:intron | 15.0% |
!!! | TTCATGGTTTTATTTTTTTA+TGG | - | chr8_3:44438314-44438333 | None:intergenic | 15.0% |
!! | TTGAAATGAAAAAAAGATAA+AGG | + | chr8_3:44438379-44438398 | Msa1289930:intron | 15.0% |
!! | TTATTATGTAATAAGTAGTT+AGG | - | chr8_3:44438454-44438473 | None:intergenic | 15.0% |
!! | TAAATAAAATATCATTGACA+TGG | - | chr8_3:44439443-44439462 | None:intergenic | 15.0% |
!! | AATCCCAATTTATTAATTTA+GGG | - | chr8_3:44439796-44439815 | None:intergenic | 15.0% |
!! | AAATCCCAATTTATTAATTT+AGG | - | chr8_3:44439797-44439816 | None:intergenic | 15.0% |
!!! | AATTAATAAATTGGGATTTT+AGG | + | chr8_3:44439798-44439817 | Msa1289930:intron | 15.0% |
!! | ATATGCAAAAAAAAATCTAT+AGG | - | chr8_3:44440192-44440211 | None:intergenic | 15.0% |
!! | CCTTATCATTTATATATATA+GGG | - | chr8_3:44440403-44440422 | None:intergenic | 15.0% |
!! | CCTATATATATAAATGATAA+GGG | + | chr8_3:44440401-44440420 | Msa1289930:intron | 15.0% |
!! | AACTATAAATCAAATGATAA+TGG | - | chr8_3:44440517-44440536 | None:intergenic | 15.0% |
!! | ATTTAACTATGTTATAGAAA+TGG | + | chr8_3:44440641-44440660 | Msa1289930:intron | 15.0% |
!!! | GATTTTGATTAAATTATCAA+AGG | + | chr8_3:44440694-44440713 | Msa1289930:intron | 15.0% |
!!! | TCATTATTATTTAGTTTAAG+TGG | + | chr8_3:44441178-44441197 | Msa1289930:intron | 15.0% |
!!! | CATTATTATTTAGTTTAAGT+GGG | + | chr8_3:44441179-44441198 | Msa1289930:intron | 15.0% |
!! | AAGAATAAACAACTAATATA+TGG | - | chr8_3:44442179-44442198 | None:intergenic | 15.0% |
!! | TAAAGCATATAAAAATATGT+GGG | - | chr8_3:44442230-44442249 | None:intergenic | 15.0% |
!! | ATTCAAATTTATTAAACATC+GGG | - | chr8_3:44442409-44442428 | None:intergenic | 15.0% |
!!! | AAGAATGAATAATATTTTGT+TGG | + | chr8_3:44442515-44442534 | Msa1289930:intron | 15.0% |
!! | TCAAAATAATGAAGAATAAA+AGG | + | chr8_3:44442748-44442767 | Msa1289930:three_prime_UTR | 15.0% |
!! | TTGAATTGAATTGAATTGAA+TGG | - | chr8_3:44434298-44434317 | None:intergenic | 20.0% |
!! | TTCAGAAAAAATCTCAATTA+GGG | - | chr8_3:44434751-44434770 | None:intergenic | 20.0% |
!! | ATTCAGAAAAAATCTCAATT+AGG | - | chr8_3:44434752-44434771 | None:intergenic | 20.0% |
!!! | TTATTTGTTATCTTCTAGTA+AGG | + | chr8_3:44435290-44435309 | Msa1289930:intron | 20.0% |
!! | TTACTAGTAACTTATTGAAA+TGG | + | chr8_3:44435315-44435334 | Msa1289930:intron | 20.0% |
!! | AATAGATAAAAGTTATCAAC+AGG | - | chr8_3:44435587-44435606 | None:intergenic | 20.0% |
!! | AAAAATCTTATCAATCTCTT+TGG | - | chr8_3:44436106-44436125 | None:intergenic | 20.0% |
!! | ACTAAATCAAACATGTATAT+AGG | - | chr8_3:44436516-44436535 | None:intergenic | 20.0% |
!!! | ATATACATGTTTGATTTAGT+TGG | + | chr8_3:44436516-44436535 | Msa1289930:intron | 20.0% |
!! | TAAATGTATTTACTTTGTAC+AGG | + | chr8_3:44436731-44436750 | Msa1289930:intron | 20.0% |
!! | ATCATCTATGATTATTTCAT+TGG | + | chr8_3:44436951-44436970 | Msa1289930:intron | 20.0% |
!!! | TTGGTCATTATATTAGTTTT+AGG | + | chr8_3:44436970-44436989 | Msa1289930:intron | 20.0% |
!!! | TGGTCATTATATTAGTTTTA+GGG | + | chr8_3:44436971-44436990 | Msa1289930:intron | 20.0% |
!!! | TTGATCTAAATCATTTGTTA+TGG | + | chr8_3:44437029-44437048 | Msa1289930:intron | 20.0% |
!! | ATGATACACTTTATAAATGT+TGG | + | chr8_3:44437123-44437142 | Msa1289930:intron | 20.0% |
!! | TGATACACTTTATAAATGTT+GGG | + | chr8_3:44437124-44437143 | Msa1289930:intron | 20.0% |
!! | TTAATCAAATGCATATAAGA+TGG | + | chr8_3:44437403-44437422 | Msa1289930:intron | 20.0% |
!! | TAATCAAATGCATATAAGAT+GGG | + | chr8_3:44437404-44437423 | Msa1289930:intron | 20.0% |
!!! | CAATTATAAAGTGTTTACTT+GGG | - | chr8_3:44438029-44438048 | None:intergenic | 20.0% |
!! | TAACTAACTTAATAACTACT+TGG | + | chr8_3:44438101-44438120 | Msa1289930:intron | 20.0% |
!! | CTTGAAAATTCATATGTAAA+TGG | + | chr8_3:44438341-44438360 | Msa1289930:intron | 20.0% |
!! | GTTACCTAAAATTAAGTTAT+AGG | + | chr8_3:44438410-44438429 | Msa1289930:intron | 20.0% |
!!! | TAGTCCTATAACTTAATTTT+AGG | - | chr8_3:44438417-44438436 | None:intergenic | 20.0% |
!! | AAATTAAGTTATAGGACTAA+AGG | + | chr8_3:44438418-44438437 | Msa1289930:intron | 20.0% |
!! | AAATAGCAAGAATAATTGTT+CGG | - | chr8_3:44438823-44438842 | None:intergenic | 20.0% |
!! | CAAACATAAATAAGAACAAA+CGG | - | chr8_3:44439111-44439130 | None:intergenic | 20.0% |
!! | TCAGAAACAAAAATGTATTA+AGG | - | chr8_3:44439150-44439169 | None:intergenic | 20.0% |
!! | CTAATACTAAATCATATGAT+TGG | - | chr8_3:44439337-44439356 | None:intergenic | 20.0% |
!! | AAAAAAAAAACGATGAACTA+AGG | - | chr8_3:44439718-44439737 | None:intergenic | 20.0% |
!! | AGAACCCTAAATTAATAAAT+TGG | + | chr8_3:44439789-44439808 | Msa1289930:intron | 20.0% |
!! | GAACCCTAAATTAATAAATT+GGG | + | chr8_3:44439790-44439809 | Msa1289930:intron | 20.0% |
!! | ATCTTTAATTAAATGGTTTG+TGG | + | chr8_3:44439877-44439896 | Msa1289930:intron | 20.0% |
!! | ATTGTGAATCAATTTGTATT+AGG | + | chr8_3:44440039-44440058 | Msa1289930:intron | 20.0% |
!! | AAATCAATTCAATCAATTTC+TGG | + | chr8_3:44440136-44440155 | Msa1289930:intron | 20.0% |
!!! | TAATAGTTGATTTAAATCCA+AGG | + | chr8_3:44440309-44440328 | Msa1289930:intron | 20.0% |
!!! | AATAGTTGATTTAAATCCAA+GGG | + | chr8_3:44440310-44440329 | Msa1289930:intron | 20.0% |
!! | CCCTATATATATAAATGATA+AGG | + | chr8_3:44440400-44440419 | Msa1289930:intron | 20.0% |
!! | CCCTTATCATTTATATATAT+AGG | - | chr8_3:44440404-44440423 | None:intergenic | 20.0% |
!! | ATATATAAATGATAAGGGTT+AGG | + | chr8_3:44440406-44440425 | Msa1289930:intron | 20.0% |
!!! | AATAGTGTTATTATAGAATG+AGG | - | chr8_3:44440612-44440631 | None:intergenic | 20.0% |
!!! | AATATTTGCTAGATTATGAT+TGG | + | chr8_3:44440719-44440738 | Msa1289930:intron | 20.0% |
!! | CTCAATTTAATTAAACAACA+AGG | - | chr8_3:44440902-44440921 | None:intergenic | 20.0% |
!!! | CTTGTTGTTTAATTAAATTG+AGG | + | chr8_3:44440900-44440919 | Msa1289930:intron | 20.0% |
!!! | TTATTGACTATTTTGATTAC+AGG | + | chr8_3:44440934-44440953 | Msa1289930:intron | 20.0% |
!! | AAATGAAAAATGATATCTGA+GGG | - | chr8_3:44442038-44442057 | None:intergenic | 20.0% |
!! | AAAATGAAAAATGATATCTG+AGG | - | chr8_3:44442039-44442058 | None:intergenic | 20.0% |
!!! | TTTTAGCAATTAAACTCTAA+TGG | - | chr8_3:44442072-44442091 | None:intergenic | 20.0% |
!! | GTAAAGCATATAAAAATATG+TGG | - | chr8_3:44442231-44442250 | None:intergenic | 20.0% |
!!! | TGTTTTATTTTCTTATTTCC+AGG | + | chr8_3:44442262-44442281 | Msa1289930:intron | 20.0% |
!! | TTTACCAATGTATATGTTAA+AGG | + | chr8_3:44442314-44442333 | Msa1289930:CDS | 20.0% |
!! | ATACACAAGAATAATAAGTA+GGG | - | chr8_3:44442371-44442390 | None:intergenic | 20.0% |
!! | AATACACAAGAATAATAAGT+AGG | - | chr8_3:44442372-44442391 | None:intergenic | 20.0% |
!!! | TGTGTTTTATTAAACTCTTA+TGG | + | chr8_3:44442611-44442630 | Msa1289930:intron | 20.0% |
!! | AAGGATATAACTATCATTTA+TGG | - | chr8_3:44442698-44442717 | None:intergenic | 20.0% |
!!! | TTTTGATTAGTTTGTAACAA+CGG | - | chr8_3:44442734-44442753 | None:intergenic | 20.0% |
!! | AAATTACAATCTGAATGTAT+AGG | - | chr8_3:44442861-44442880 | None:intergenic | 20.0% |
!!! | ATACATTCAGATTGTAATTT+TGG | + | chr8_3:44442861-44442880 | Msa1289930:three_prime_UTR | 20.0% |
!! | GATGAGTACATAAAAAATAA+TGG | - | chr8_3:44443003-44443022 | None:intergenic | 20.0% |
! | TTAGTTGTGAGATAAGATTA+TGG | - | chr8_3:44434056-44434075 | None:intergenic | 25.0% |
! | GATTAGATTTCAATTTGTAG+AGG | - | chr8_3:44434233-44434252 | None:intergenic | 25.0% |
!!! | TGAGATTTTTTCTGAATTGA+TGG | + | chr8_3:44434755-44434774 | Msa1289930:CDS | 25.0% |
!!! | GAGATTTTTTCTGAATTGAT+GGG | + | chr8_3:44434756-44434775 | Msa1289930:CDS | 25.0% |
!!! | TTTTGGTCAGAAGTATAATA+AGG | + | chr8_3:44434899-44434918 | Msa1289930:CDS | 25.0% |
! | TACAAAGCAAAAGTAACATT+GGG | - | chr8_3:44434927-44434946 | None:intergenic | 25.0% |
! | ATACAAAGCAAAAGTAACAT+TGG | - | chr8_3:44434928-44434947 | None:intergenic | 25.0% |
!!! | AATGTTACTTTTGCTTTGTA+TGG | + | chr8_3:44434927-44434946 | Msa1289930:CDS | 25.0% |
!!! | ATTTTGATTTGTGTAACAGA+TGG | + | chr8_3:44435113-44435132 | Msa1289930:intron | 25.0% |
!!! | TTTTGGAATGGCATTTTTAA+TGG | + | chr8_3:44435247-44435266 | Msa1289930:intron | 25.0% |
!!! | GAAATGGTTGATTTTTATGT+TGG | + | chr8_3:44435331-44435350 | Msa1289930:intron | 25.0% |
!!! | GTTGATTTTTATGTTGGATT+TGG | + | chr8_3:44435337-44435356 | Msa1289930:intron | 25.0% |
!!! | CAGTTTTATTTACTCAATGT+AGG | - | chr8_3:44435447-44435466 | None:intergenic | 25.0% |
! | GTAAATAAAACTGCTAAATG+TGG | + | chr8_3:44435454-44435473 | Msa1289930:intron | 25.0% |
!! | TTATCAACAGGCTAATTTTT+GGG | - | chr8_3:44435575-44435594 | None:intergenic | 25.0% |
! | GTTTATCTTATGTTGTAGTT+TGG | - | chr8_3:44435865-44435884 | None:intergenic | 25.0% |
!! | CATGGACTAAATTAAAAACA+TGG | - | chr8_3:44436131-44436150 | None:intergenic | 25.0% |
! | ACGTATTTAGGTAAGAAAAA+TGG | - | chr8_3:44436481-44436500 | None:intergenic | 25.0% |
!! | TTTGAGCAGAGATATTTTAT+GGG | + | chr8_3:44436563-44436582 | Msa1289930:intron | 25.0% |
!! | ATATTTTATGGGTATGATTG+TGG | + | chr8_3:44436574-44436593 | Msa1289930:intron | 25.0% |
!!! | ATCTAAATCATTTGTTATGG+CGG | + | chr8_3:44437032-44437051 | Msa1289930:intron | 25.0% |
! | TTAGTCATCAAACTAGATAT+AGG | + | chr8_3:44437075-44437094 | Msa1289930:intron | 25.0% |
!!! | TATAGGTCCATTTAATTTTG+TGG | + | chr8_3:44437092-44437111 | Msa1289930:intron | 25.0% |
! | GATACACTTTATAAATGTTG+GGG | + | chr8_3:44437125-44437144 | Msa1289930:intron | 25.0% |
! | ACTTCATATCTAGAAAAACA+GGG | - | chr8_3:44437749-44437768 | None:intergenic | 25.0% |
! | TCTAGATATGAAGTGTAATT+TGG | + | chr8_3:44437755-44437774 | Msa1289930:intron | 25.0% |
! | CTAGATATGAAGTGTAATTT+GGG | + | chr8_3:44437756-44437775 | Msa1289930:intron | 25.0% |
! | AAAATCACCATTTAGATTGT+AGG | + | chr8_3:44437885-44437904 | Msa1289930:intron | 25.0% |
!! | TATACTATTAGTTTGGATGT+TGG | - | chr8_3:44437930-44437949 | None:intergenic | 25.0% |
!! | GCAATTATAAAGTGTTTACT+TGG | - | chr8_3:44438030-44438049 | None:intergenic | 25.0% |
! | TGTATTGTGTGTGAATAAAA+GGG | - | chr8_3:44438081-44438100 | None:intergenic | 25.0% |
! | ATGTATTGTGTGTGAATAAA+AGG | - | chr8_3:44438082-44438101 | None:intergenic | 25.0% |
!! | TCATTTCAATTTTGTCCTTT+TGG | + | chr8_3:44438203-44438222 | Msa1289930:intron | 25.0% |
! | CTTGAATATCCATATGAAAA+TGG | - | chr8_3:44438230-44438249 | None:intergenic | 25.0% |
!!! | ATTTTCAAGCTTCAAATTCA+TGG | - | chr8_3:44438330-44438349 | None:intergenic | 25.0% |
!! | TCATTTCAATTTTGTCCTTT+TGG | - | chr8_3:44438203-44438222 | None:intergenic | 25.0% |
! | ACGATATGATTAGATTATGT+GGG | + | chr8_3:44438589-44438608 | Msa1289930:intron | 25.0% |
!! | ACTGATTTCATGAATAAGAT+TGG | - | chr8_3:44438619-44438638 | None:intergenic | 25.0% |
! | AATCTTATTCATGAAATCAG+TGG | + | chr8_3:44438618-44438637 | Msa1289930:intron | 25.0% |
!!! | CATTTTTTTTTAAAAGCCTG+AGG | + | chr8_3:44438670-44438689 | Msa1289930:intron | 25.0% |
!!! | TTGAGCATATTTTTGTCTTT+TGG | + | chr8_3:44438725-44438744 | Msa1289930:intron | 25.0% |
!!! | TACATTTTTGTTTCTGAAGT+AGG | + | chr8_3:44439153-44439172 | Msa1289930:intron | 25.0% |
! | TAAAATATCATTGACATGGT+AGG | - | chr8_3:44439439-44439458 | None:intergenic | 25.0% |
! | AATAATTATTGTGAGATGAG+AGG | + | chr8_3:44439629-44439648 | Msa1289930:intron | 25.0% |
! | AATCGTTGAATTAAATCCAA+GGG | - | chr8_3:44439667-44439686 | None:intergenic | 25.0% |
! | CTTGCTGATCTTTAATTAAA+TGG | + | chr8_3:44439870-44439889 | Msa1289930:intron | 25.0% |
! | ATACTGTGAAATTCTTTCAA+TGG | - | chr8_3:44439947-44439966 | None:intergenic | 25.0% |
! | CATTAATTATTGTGAGAGAA+GGG | - | chr8_3:44440363-44440382 | None:intergenic | 25.0% |
! | TTCTACTGAAAAGGAATTAA+AGG | + | chr8_3:44441006-44441025 | Msa1289930:CDS | 25.0% |
! | GAGGAACTAAAAAATTGTAT+TGG | + | chr8_3:44441354-44441373 | Msa1289930:intron | 25.0% |
! | GAACTAAAAAATTGTATTGG+AGG | + | chr8_3:44441357-44441376 | Msa1289930:intron | 25.0% |
! | TAAAAAATTGTATTGGAGGA+GGG | + | chr8_3:44441361-44441380 | Msa1289930:intron | 25.0% |
! | AAAGCCTAAGAAAAATAAGA+AGG | + | chr8_3:44441596-44441615 | Msa1289930:intron | 25.0% |
!! | ATGTGAGTTTTCAGTTATTA+GGG | + | chr8_3:44441680-44441699 | Msa1289930:intron | 25.0% |
!!! | TTTGTTCTAAAATCCATAAC+AGG | - | chr8_3:44441765-44441784 | None:intergenic | 25.0% |
!!! | TGTTATGGATTTTAGAACAA+AGG | + | chr8_3:44441764-44441783 | Msa1289930:intron | 25.0% |
!! | ATTGTGCAATTTCTTCTTTT+AGG | + | chr8_3:44442094-44442113 | Msa1289930:intron | 25.0% |
!!! | CTTCTTTTAGGATATTGAAA+AGG | + | chr8_3:44442106-44442125 | Msa1289930:intron | 25.0% |
! | TATTCTTCTCATACTAACTT+TGG | + | chr8_3:44442201-44442220 | Msa1289930:intron | 25.0% |
! | TAAGCCTTTAACATATACAT+TGG | - | chr8_3:44442321-44442340 | None:intergenic | 25.0% |
! | AATGTATATGTTAAAGGCTT+AGG | + | chr8_3:44442320-44442339 | Msa1289930:CDS | 25.0% |
! | ATGTATATGTTAAAGGCTTA+GGG | + | chr8_3:44442321-44442340 | Msa1289930:CDS | 25.0% |
! | TTTCCTGTATAACAAATAAC+TGG | - | chr8_3:44442478-44442497 | None:intergenic | 25.0% |
!!! | AGTTATTTGTTATACAGGAA+AGG | + | chr8_3:44442477-44442496 | Msa1289930:intron | 25.0% |
! | TGAAAGCTTTACTAAACAAA+AGG | + | chr8_3:44442555-44442574 | Msa1289930:intron | 25.0% |
! | TGAACAGTAATAATGTAGTT+TGG | + | chr8_3:44442581-44442600 | Msa1289930:intron | 25.0% |
!!! | TTTGTGATATTTTGAATTGC+AGG | + | chr8_3:44442634-44442653 | Msa1289930:intron | 25.0% |
!! | TTGTTTCTTGAATAGCAATA+TGG | + | chr8_3:44442832-44442851 | Msa1289930:three_prime_UTR | 25.0% |
!! | ATTCAGATTGTAATTTTGGA+GGG | + | chr8_3:44442865-44442884 | Msa1289930:three_prime_UTR | 25.0% |
!! | TTTTGAATGTGTTTCACAAT+TGG | + | chr8_3:44442964-44442983 | Msa1289930:three_prime_UTR | 25.0% |
! | TCAATTATACCCATTCATAT+TGG | + | chr8_3:44443033-44443052 | Msa1289930:three_prime_UTR | 25.0% |
! | CAATTATACCCATTCATATT+GGG | + | chr8_3:44443034-44443053 | Msa1289930:three_prime_UTR | 25.0% |
! | TCTTAATACCCAATATGAAT+GGG | - | chr8_3:44443045-44443064 | None:intergenic | 25.0% |
! | TTCTTAATACCCAATATGAA+TGG | - | chr8_3:44443046-44443065 | None:intergenic | 25.0% |
! | CAATAATTAAATCTGCAAAC+AGG | - | chr8_3:44443104-44443123 | None:intergenic | 25.0% |
! | GTTTGCAGATTTAATTATTG+AGG | + | chr8_3:44443104-44443123 | Msa1289930:three_prime_UTR | 25.0% |
! | ATACGTATACCTTTAGTATT+TGG | + | chr8_3:44443222-44443241 | Msa1289930:three_prime_UTR | 25.0% |
GATTCTTCTTCTTCTATGAA+TGG | - | chr8_3:44434164-44434183 | None:intergenic | 30.0% | |
AAGAAAAGCAGTCAAATTAG+GGG | - | chr8_3:44434203-44434222 | None:intergenic | 30.0% | |
GAAGAAAAGCAGTCAAATTA+GGG | - | chr8_3:44434204-44434223 | None:intergenic | 30.0% | |
TGAAGAAAAGCAGTCAAATT+AGG | - | chr8_3:44434205-44434224 | None:intergenic | 30.0% | |
GATTTCAATTTGTAGAGGTT+AGG | - | chr8_3:44434228-44434247 | None:intergenic | 30.0% | |
!!! | TTTTTTCTGAATTGATGGGA+AGG | + | chr8_3:44434760-44434779 | Msa1289930:CDS | 30.0% |
! | TTCCATGCATTTTTATAGGA+AGG | + | chr8_3:44434812-44434831 | Msa1289930:CDS | 30.0% |
TTCCTTCCTATAAAAATGCA+TGG | - | chr8_3:44434817-44434836 | None:intergenic | 30.0% | |
! | ATGCATTTTTATAGGAAGGA+AGG | + | chr8_3:44434816-44434835 | Msa1289930:CDS | 30.0% |
! | ATTTTTATAGGAAGGAAGGT+GGG | + | chr8_3:44434820-44434839 | Msa1289930:CDS | 30.0% |
GATTCAAAACTCATGAAAGT+AGG | - | chr8_3:44435057-44435076 | None:intergenic | 30.0% | |
ATTTGTGTAACAGATGGAAT+GGG | + | chr8_3:44435119-44435138 | Msa1289930:intron | 30.0% | |
! | GATTAATCATTAGCACGTTT+TGG | + | chr8_3:44435220-44435239 | Msa1289930:intron | 30.0% |
AAAGTATAGATACTGACATG+TGG | + | chr8_3:44435389-44435408 | Msa1289930:intron | 30.0% | |
! | GTTATCAACAGGCTAATTTT+TGG | - | chr8_3:44435576-44435595 | None:intergenic | 30.0% |
TAGTATACTCCTAAAAACCT+AGG | + | chr8_3:44435612-44435631 | Msa1289930:intron | 30.0% | |
! | CGATTTGTGGTTTTTCTATT+GGG | - | chr8_3:44435727-44435746 | None:intergenic | 30.0% |
!! | TCGATTTGTGGTTTTTCTAT+TGG | - | chr8_3:44435728-44435747 | None:intergenic | 30.0% |
! | AATGAGATTTTTGCGGTTTT+CGG | - | chr8_3:44435762-44435781 | None:intergenic | 30.0% |
AAAACCGCAAAAATCTCATT+CGG | + | chr8_3:44435762-44435781 | Msa1289930:intron | 30.0% | |
!!! | TCGGTTTGCGTTTTTTATTT+TGG | + | chr8_3:44435831-44435850 | Msa1289930:intron | 30.0% |
TCTTATGTTGTAGTTTGGTT+CGG | - | chr8_3:44435860-44435879 | None:intergenic | 30.0% | |
TTAAACTTATGTCAACCACA+TGG | + | chr8_3:44435890-44435909 | Msa1289930:intron | 30.0% | |
TTTCTCATTGAATTTCCATG+TGG | - | chr8_3:44435908-44435927 | None:intergenic | 30.0% | |
! | GATAAAAAAAGCATGTGGTT+TGG | - | chr8_3:44436320-44436339 | None:intergenic | 30.0% |
!!! | CACATGCTTTTTTTATCTTG+CGG | + | chr8_3:44436323-44436342 | Msa1289930:intron | 30.0% |
! | TGATTTTCTTGTTCTTGTGT+CGG | + | chr8_3:44436410-44436429 | Msa1289930:intron | 30.0% |
ATGCACAATTCTACGTATTT+AGG | - | chr8_3:44436493-44436512 | None:intergenic | 30.0% | |
! | TTTGATTTAGTTGGATGCAT+AGG | + | chr8_3:44436525-44436544 | Msa1289930:intron | 30.0% |
! | GTTTGAGCAGAGATATTTTA+TGG | + | chr8_3:44436562-44436581 | Msa1289930:intron | 30.0% |
ATTTACTTTGTACAGGTAGA+TGG | + | chr8_3:44436738-44436757 | Msa1289930:intron | 30.0% | |
!!! | TTAGTTTTAGGGCTAAAAGA+AGG | + | chr8_3:44436982-44437001 | Msa1289930:intron | 30.0% |
!! | TCTCGTTTTTCACCATAAAA+TGG | + | chr8_3:44437215-44437234 | Msa1289930:intron | 30.0% |
!! | CTCGTTTTTCACCATAAAAT+GGG | + | chr8_3:44437216-44437235 | Msa1289930:intron | 30.0% |
!!! | TGTGTTAATTCTTGCTGTTT+TGG | + | chr8_3:44437308-44437327 | Msa1289930:intron | 30.0% |
!!! | GTGTTAATTCTTGCTGTTTT+GGG | + | chr8_3:44437309-44437328 | Msa1289930:intron | 30.0% |
!!! | TGTTAATTCTTGCTGTTTTG+GGG | + | chr8_3:44437310-44437329 | Msa1289930:intron | 30.0% |
!!! | GAGTGTAGTTTTTTGAACTA+AGG | + | chr8_3:44437379-44437398 | Msa1289930:intron | 30.0% |
ATATAAGATGGGAATACTCT+GGG | + | chr8_3:44437415-44437434 | Msa1289930:intron | 30.0% | |
TTATATACAATCAGCTACCT+AGG | - | chr8_3:44437520-44437539 | None:intergenic | 30.0% | |
! | ATATAATTTGCGTGATCCAT+AGG | + | chr8_3:44437534-44437553 | Msa1289930:intron | 30.0% |
AACATCTTAAGCGTATAACA+AGG | + | chr8_3:44437661-44437680 | Msa1289930:intron | 30.0% | |
CTTCATATCTAGAAAAACAG+GGG | - | chr8_3:44437748-44437767 | None:intergenic | 30.0% | |
CACTTCATATCTAGAAAAAC+AGG | - | chr8_3:44437750-44437769 | None:intergenic | 30.0% | |
TTAGTAAACACAGCAACATA+AGG | - | chr8_3:44437867-44437886 | None:intergenic | 30.0% | |
TCTCAATCCTACAATCTAAA+TGG | - | chr8_3:44437895-44437914 | None:intergenic | 30.0% | |
! | TATAAAGTGTTTACTTGGGA+AGG | - | chr8_3:44438025-44438044 | None:intergenic | 30.0% |
GTAAACACTTTATAATTGCG+AGG | + | chr8_3:44438031-44438050 | Msa1289930:intron | 30.0% | |
GTTGGCTGAAATTAAGTTAA+GGG | - | chr8_3:44438145-44438164 | None:intergenic | 30.0% | |
! | TGTTGGCTGAAATTAAGTTA+AGG | - | chr8_3:44438146-44438165 | None:intergenic | 30.0% |
CCTTTCAATCTTCAAATCTA+CGG | - | chr8_3:44438291-44438310 | None:intergenic | 30.0% | |
TCATATGTAAATGGACCAAA+AGG | + | chr8_3:44438350-44438369 | Msa1289930:intron | 30.0% | |
CACGATATGATTAGATTATG+TGG | + | chr8_3:44438588-44438607 | Msa1289930:intron | 30.0% | |
TATGCTCAAGAGTGAAATAA+GGG | - | chr8_3:44438714-44438733 | None:intergenic | 30.0% | |
ATATGCTCAAGAGTGAAATA+AGG | - | chr8_3:44438715-44438734 | None:intergenic | 30.0% | |
! | TTCCAAACATACCTTTTTAC+CGG | + | chr8_3:44438758-44438777 | Msa1289930:intron | 30.0% |
CCTTGAACAATTAAGTCATT+GGG | - | chr8_3:44438906-44438925 | None:intergenic | 30.0% | |
!! | ATTTAAGCCTTTTAGAGAGT+TGG | + | chr8_3:44439257-44439276 | Msa1289930:intron | 30.0% |
TTATTTAGTCAGAGTCAGAT+AGG | + | chr8_3:44439456-44439475 | Msa1289930:intron | 30.0% | |
GAATCGTTGAATTAAATCCA+AGG | - | chr8_3:44439668-44439687 | None:intergenic | 30.0% | |
ATGGTCAAGTCTTGAATTAT+AGG | + | chr8_3:44439913-44439932 | Msa1289930:intron | 30.0% | |
GCATTAATTATTGTGAGAGA+AGG | - | chr8_3:44440364-44440383 | None:intergenic | 30.0% | |
ATTCCTAGTTTCCTTACTTT+GGG | + | chr8_3:44440556-44440575 | Msa1289930:intron | 30.0% | |
TAATGTCCAGATTCTTGAAA+TGG | + | chr8_3:44440765-44440784 | Msa1289930:intron | 30.0% | |
TGGAAGAAATAGAGGAAAAT+GGG | + | chr8_3:44441275-44441294 | Msa1289930:intron | 30.0% | |
!!! | TTTTTTAGTTCCTCCAAATG+AGG | - | chr8_3:44441348-44441367 | None:intergenic | 30.0% |
CTAAAAAATTGTATTGGAGG+AGG | + | chr8_3:44441360-44441379 | Msa1289930:intron | 30.0% | |
!!! | TGCACCTTCTTATTTTTCTT+AGG | - | chr8_3:44441603-44441622 | None:intergenic | 30.0% |
! | TAAGAAAAATAAGAAGGTGC+AGG | + | chr8_3:44441602-44441621 | Msa1289930:intron | 30.0% |
! | AAGAAAAATAAGAAGGTGCA+GGG | + | chr8_3:44441603-44441622 | Msa1289930:intron | 30.0% |
! | CATGTGAGTTTTCAGTTATT+AGG | + | chr8_3:44441679-44441698 | Msa1289930:intron | 30.0% |
! | TGTGAGTTTTCAGTTATTAG+GGG | + | chr8_3:44441681-44441700 | Msa1289930:intron | 30.0% |
! | CTTAATCCCTATTTGTTGAA+AGG | + | chr8_3:44441834-44441853 | Msa1289930:intron | 30.0% |
ATGAGTCCTTTCAACAAATA+GGG | - | chr8_3:44441843-44441862 | None:intergenic | 30.0% | |
AATGAGTCCTTTCAACAAAT+AGG | - | chr8_3:44441844-44441863 | None:intergenic | 30.0% | |
AAAGGACTCATTACATTCAT+AGG | + | chr8_3:44441852-44441871 | Msa1289930:intron | 30.0% | |
ACTGAAAAGTAGTGTGAAAT+AGG | + | chr8_3:44441949-44441968 | Msa1289930:intron | 30.0% | |
CTGAAAAGTAGTGTGAAATA+GGG | + | chr8_3:44441950-44441969 | Msa1289930:intron | 30.0% | |
TGAAAAGTAGTGTGAAATAG+GGG | + | chr8_3:44441951-44441970 | Msa1289930:intron | 30.0% | |
ATATGGTTATACCTTTGCTT+TGG | - | chr8_3:44442162-44442181 | None:intergenic | 30.0% | |
CATTGGTAAATAGATCAGAT+GGG | - | chr8_3:44442304-44442323 | None:intergenic | 30.0% | |
ACATTGGTAAATAGATCAGA+TGG | - | chr8_3:44442305-44442324 | None:intergenic | 30.0% | |
TGTATATGTTAAAGGCTTAG+GGG | + | chr8_3:44442322-44442341 | Msa1289930:CDS | 30.0% | |
!! | ACTCCAGTTATTTGTTATAC+AGG | + | chr8_3:44442472-44442491 | Msa1289930:intron | 30.0% |
TTTCTTGAATAGCAATATGG+CGG | + | chr8_3:44442835-44442854 | Msa1289930:three_prime_UTR | 30.0% | |
! | CATTCAGATTGTAATTTTGG+AGG | + | chr8_3:44442864-44442883 | Msa1289930:three_prime_UTR | 30.0% |
TACAACTATGTGATGCAAAT+TGG | + | chr8_3:44442919-44442938 | Msa1289930:three_prime_UTR | 30.0% | |
TATGTCTAGACAATTGAACT+AGG | - | chr8_3:44443184-44443203 | None:intergenic | 30.0% | |
TTCTATGAATGGAAAGAGTG+AGG | - | chr8_3:44434153-44434172 | None:intergenic | 35.0% | |
TTTCCAGTATCAGATCCAAA+TGG | + | chr8_3:44434332-44434351 | Msa1289930:exon | 35.0% | |
AAGGAAATAGGGTTTGAGAA+GGG | - | chr8_3:44434394-44434413 | None:intergenic | 35.0% | |
AAAGGAAATAGGGTTTGAGA+AGG | - | chr8_3:44434395-44434414 | None:intergenic | 35.0% | |
CGTATTGAGGAAAGGAAATA+GGG | - | chr8_3:44434405-44434424 | None:intergenic | 35.0% | |
TCGTATTGAGGAAAGGAAAT+AGG | - | chr8_3:44434406-44434425 | None:intergenic | 35.0% | |
AATTGATGGGAAGGAAAGAT+GGG | + | chr8_3:44434769-44434788 | Msa1289930:CDS | 35.0% | |
! | GTGGTTCCATGCATTTTTAT+AGG | + | chr8_3:44434808-44434827 | Msa1289930:CDS | 35.0% |
! | CATTTTTATAGGAAGGAAGG+TGG | + | chr8_3:44434819-44434838 | Msa1289930:CDS | 35.0% |
! | ACTTTTGCTTTGTATGGTGA+TGG | + | chr8_3:44434933-44434952 | Msa1289930:CDS | 35.0% |
TTCTCACAAACCAAAATAGC+AGG | - | chr8_3:44435017-44435036 | None:intergenic | 35.0% | |
GATTTGTGTAACAGATGGAA+TGG | + | chr8_3:44435118-44435137 | Msa1289930:intron | 35.0% | |
TTTGTGTAACAGATGGAATG+GGG | + | chr8_3:44435120-44435139 | Msa1289930:intron | 35.0% | |
ATCTTTCTAACCTTCAATCC+AGG | - | chr8_3:44435203-44435222 | None:intergenic | 35.0% | |
!! | TAGCACGTTTTGGTAACTTT+TGG | + | chr8_3:44435230-44435249 | Msa1289930:intron | 35.0% |
!! | CGTTTTGGTAACTTTTGGAA+TGG | + | chr8_3:44435235-44435254 | Msa1289930:intron | 35.0% |
CAATGTAGGACTCTTAACAT+AGG | - | chr8_3:44435433-44435452 | None:intergenic | 35.0% | |
ACGAAAACACCAATTGTTAG+CGG | + | chr8_3:44435525-44435544 | Msa1289930:intron | 35.0% | |
! | GCTAAATCACCTAGGTTTTT+AGG | - | chr8_3:44435624-44435643 | None:intergenic | 35.0% |
!!! | GTTTTTCTATTGGGTTGGTT+CGG | - | chr8_3:44435718-44435737 | None:intergenic | 35.0% |
! | TTGTGGTTTTTCTATTGGGT+TGG | - | chr8_3:44435723-44435742 | None:intergenic | 35.0% |
!!! | CATTTTTTGACTCAACCACA+TGG | + | chr8_3:44435802-44435821 | Msa1289930:intron | 35.0% |
TGTTCTCATCAACATCAACA+TGG | - | chr8_3:44436149-44436168 | None:intergenic | 35.0% | |
! | GATGTTGATGAGAACATTGT+TGG | + | chr8_3:44436153-44436172 | Msa1289930:intron | 35.0% |
! | CGCAAGATAAAAAAAGCATG+TGG | - | chr8_3:44436325-44436344 | None:intergenic | 35.0% |
AAAATCACCACGCAATTTAG+GGG | - | chr8_3:44436397-44436416 | None:intergenic | 35.0% | |
GAAAATCACCACGCAATTTA+GGG | - | chr8_3:44436398-44436417 | None:intergenic | 35.0% | |
AGAAAATCACCACGCAATTT+AGG | - | chr8_3:44436399-44436418 | None:intergenic | 35.0% | |
AATGGAACAGTTCACAAGAA+AGG | - | chr8_3:44436463-44436482 | None:intergenic | 35.0% | |
!! | AAGGAACATGCTTTGAAGAA+TGG | + | chr8_3:44436801-44436820 | Msa1289930:CDS | 35.0% |
GCTATTGTTAAACGATGTTC+CGG | + | chr8_3:44436878-44436897 | Msa1289930:intron | 35.0% | |
!!! | TTGACAGAGCGATTTTGATT+AGG | + | chr8_3:44436924-44436943 | Msa1289930:intron | 35.0% |
AAATAATTTACAAGGCCCAC+AGG | - | chr8_3:44437177-44437196 | None:intergenic | 35.0% | |
! | AACAGAATCAGCCCATTTTA+TGG | - | chr8_3:44437230-44437249 | None:intergenic | 35.0% |
CTGAGTGTTTGATTCAACAT+GGG | + | chr8_3:44437340-44437359 | Msa1289930:intron | 35.0% | |
CATATAAGATGGGAATACTC+TGG | + | chr8_3:44437414-44437433 | Msa1289930:intron | 35.0% | |
TAAATCATGTGCATCTTCAC+CGG | + | chr8_3:44437633-44437652 | Msa1289930:intron | 35.0% | |
TGAAGTGTAATTTGGGAACA+AGG | + | chr8_3:44437763-44437782 | Msa1289930:intron | 35.0% | |
CCTTAATTTCTCTTCTACGA+GGG | + | chr8_3:44437809-44437828 | Msa1289930:intron | 35.0% | |
TGTAGGATTGAGATAGAAAC+TGG | + | chr8_3:44437902-44437921 | Msa1289930:intron | 35.0% | |
AAGCTCTCAAATTCTTGGAA+GGG | - | chr8_3:44437995-44438014 | None:intergenic | 35.0% | |
AAAGCTCTCAAATTCTTGGA+AGG | - | chr8_3:44437996-44438015 | None:intergenic | 35.0% | |
! | TCCAAGAATTTGAGAGCTTT+TGG | + | chr8_3:44437996-44438015 | Msa1289930:intron | 35.0% |
ACCAAAAGCTCTCAAATTCT+TGG | - | chr8_3:44438000-44438019 | None:intergenic | 35.0% | |
CTTAATTTCAGCCAACAGTT+TGG | + | chr8_3:44438149-44438168 | Msa1289930:intron | 35.0% | |
AAGATAAAGGACCAAACTGT+TGG | - | chr8_3:44438163-44438182 | None:intergenic | 35.0% | |
CCATATGAAAATGGACCAAA+AGG | - | chr8_3:44438221-44438240 | None:intergenic | 35.0% | |
! | CCTTTTGGTCCATTTTCATA+TGG | + | chr8_3:44438218-44438237 | Msa1289930:intron | 35.0% |
CCGTAGATTTGAAGATTGAA+AGG | + | chr8_3:44438288-44438307 | Msa1289930:intron | 35.0% | |
CATATCGTGTATTGAGATTG+TGG | - | chr8_3:44438577-44438596 | None:intergenic | 35.0% | |
CTTATTCATGAAATCAGTGG+TGG | + | chr8_3:44438621-44438640 | Msa1289930:intron | 35.0% | |
AGGTATGTTTGGAAGAAGAT+CGG | - | chr8_3:44438752-44438771 | None:intergenic | 35.0% | |
ATGAGAAAACACCGGTAAAA+AGG | - | chr8_3:44438772-44438791 | None:intergenic | 35.0% | |
CCCAATGACTTAATTGTTCA+AGG | + | chr8_3:44438903-44438922 | Msa1289930:intron | 35.0% | |
GCCTTGAACAATTAAGTCAT+TGG | - | chr8_3:44438907-44438926 | None:intergenic | 35.0% | |
!!! | TCTCTGTTTGCTGTTTTGAT+TGG | + | chr8_3:44439035-44439054 | Msa1289930:intron | 35.0% |
!!! | TGGTTTTTTTGTTCTAGTGC+TGG | + | chr8_3:44439055-44439074 | Msa1289930:intron | 35.0% |
AATCTACCTAGGATTGGAAA+GGG | - | chr8_3:44439225-44439244 | None:intergenic | 35.0% | |
AACAAATGTCAAATCCCGAT+GGG | - | chr8_3:44439295-44439314 | None:intergenic | 35.0% | |
TATCTGTGTAGCTATACTAC+AGG | - | chr8_3:44439505-44439524 | None:intergenic | 35.0% | |
!!! | AAATTGGGATTTTAGGATCG+TGG | + | chr8_3:44439805-44439824 | Msa1289930:intron | 35.0% |
!! | TTGTGGTTTTACACATCTCA+TGG | + | chr8_3:44439894-44439913 | Msa1289930:intron | 35.0% |
! | TCAGTTGAAGGATGTTTTAC+AGG | + | chr8_3:44440016-44440035 | Msa1289930:intron | 35.0% |
! | TGCGTTGACAAAAAAGAGTT+AGG | + | chr8_3:44440262-44440281 | Msa1289930:intron | 35.0% |
! | GCGTTGACAAAAAAGAGTTA+GGG | + | chr8_3:44440263-44440282 | Msa1289930:intron | 35.0% |
AATTATTGTGAGAGAAGGGA+GGG | - | chr8_3:44440359-44440378 | None:intergenic | 35.0% | |
TAATTATTGTGAGAGAAGGG+AGG | - | chr8_3:44440360-44440379 | None:intergenic | 35.0% | |
AATGATAAGGGTTAGGTCAT+TGG | + | chr8_3:44440413-44440432 | Msa1289930:intron | 35.0% | |
GATTCCTAGTTTCCTTACTT+TGG | + | chr8_3:44440555-44440574 | Msa1289930:intron | 35.0% | |
AAGTGTCCATTTCAAGAATC+TGG | - | chr8_3:44440774-44440793 | None:intergenic | 35.0% | |
ACAACAAGGACATTGTATAC+TGG | - | chr8_3:44440888-44440907 | None:intergenic | 35.0% | |
AGCTTTCTTACTCTCTCAAT+TGG | - | chr8_3:44440968-44440987 | None:intergenic | 35.0% | |
AATTGAGAGAGTAAGAAAGC+TGG | + | chr8_3:44440967-44440986 | Msa1289930:CDS | 35.0% | |
TCACGACATTTCTACTGAAA+AGG | + | chr8_3:44440997-44441016 | Msa1289930:CDS | 35.0% | |
GTGGAAGAAATAGAGGAAAA+TGG | + | chr8_3:44441274-44441293 | Msa1289930:intron | 35.0% | |
AATACAAAACCCTCCTCATT+TGG | + | chr8_3:44441332-44441351 | Msa1289930:intron | 35.0% | |
! | AAGAAAAGGAAAGGCTTTGA+GGG | - | chr8_3:44441557-44441576 | None:intergenic | 35.0% |
! | GTGAGTTTTCAGTTATTAGG+GGG | + | chr8_3:44441682-44441701 | Msa1289930:intron | 35.0% |
! | TGAGTTTTCAGTTATTAGGG+GGG | + | chr8_3:44441683-44441702 | Msa1289930:intron | 35.0% |
TCATCTGAGAAAACCTGTTA+TGG | + | chr8_3:44441749-44441768 | Msa1289930:intron | 35.0% | |
TTAGCGTTTGAGTAAGCATT+TGG | + | chr8_3:44441981-44442000 | Msa1289930:intron | 35.0% | |
TAGCGTTTGAGTAAGCATTT+GGG | + | chr8_3:44441982-44442001 | Msa1289930:intron | 35.0% | |
TTATACCTTTGCTTTGGCAA+TGG | - | chr8_3:44442156-44442175 | None:intergenic | 35.0% | |
!! | TATTTTGAATTGCAGGCATG+TGG | + | chr8_3:44442641-44442660 | Msa1289930:intron | 35.0% |
TGAATGTGTTTCACAATTGG+TGG | + | chr8_3:44442967-44442986 | Msa1289930:three_prime_UTR | 35.0% | |
CCAGATGATCCAAATACTAA+AGG | - | chr8_3:44443234-44443253 | None:intergenic | 35.0% | |
CCTTTAGTATTTGGATCATC+TGG | + | chr8_3:44443231-44443250 | Msa1289930:three_prime_UTR | 35.0% | |
!! | ATAGTTGGTGGCACAATTTG+GGG | - | chr8_3:44434120-44434139 | None:intergenic | 40.0% |
!! | GATAGTTGGTGGCACAATTT+GGG | - | chr8_3:44434121-44434140 | None:intergenic | 40.0% |
CGATTCTCATCCTCTCAATT+CGG | + | chr8_3:44434363-44434382 | Msa1289930:CDS | 40.0% | |
TGGAAGAGGAAGAAATGGAA+CGG | - | chr8_3:44434431-44434450 | None:intergenic | 40.0% | |
GTTGAAGAAGGACATGAGTT+CGG | - | chr8_3:44434538-44434557 | None:intergenic | 40.0% | |
AGTACAGTGATCACGATAAG+CGG | - | chr8_3:44434709-44434728 | None:intergenic | 40.0% | |
! | ATCACTGTACTTTTCTCTGC+AGG | + | chr8_3:44434718-44434737 | Msa1289930:CDS | 40.0% |
! | TCACTGTACTTTTCTCTGCA+GGG | + | chr8_3:44434719-44434738 | Msa1289930:CDS | 40.0% |
GAATTGATGGGAAGGAAAGA+TGG | + | chr8_3:44434768-44434787 | Msa1289930:CDS | 40.0% | |
TCTTAATATCGCCGCTCTTT+GGG | + | chr8_3:44434986-44435005 | Msa1289930:CDS | 40.0% | |
!! | TTGGGATCTTCCTGCTATTT+TGG | + | chr8_3:44435004-44435023 | Msa1289930:CDS | 40.0% |
! | CTTGTAATACGCAGGACTTT+TGG | - | chr8_3:44435165-44435184 | None:intergenic | 40.0% |
AGATTATGCTCCTGGATTGA+AGG | + | chr8_3:44435190-44435209 | Msa1289930:CDS | 40.0% | |
!!! | CAACAGGCTAATTTTTGGGT+TGG | - | chr8_3:44435571-44435590 | None:intergenic | 40.0% |
! | CAAGACTAGCTAAATCACCT+AGG | - | chr8_3:44435632-44435651 | None:intergenic | 40.0% |
! | CTAGGTGATTTAGCTAGTCT+TGG | + | chr8_3:44435630-44435649 | Msa1289930:intron | 40.0% |
!! | GTTTGGATTGGTTCGATTTG+TGG | - | chr8_3:44435740-44435759 | None:intergenic | 40.0% |
! | GATTTTTGCGGTTTTCGGTT+TGG | - | chr8_3:44435757-44435776 | None:intergenic | 40.0% |
! | CGAACCGAATGAGATTTTTG+CGG | - | chr8_3:44435769-44435788 | None:intergenic | 40.0% |
CGCAAAAATCTCATTCGGTT+CGG | + | chr8_3:44435767-44435786 | Msa1289930:intron | 40.0% | |
!! | TCATTCGGTTCGGATGTATT+CGG | + | chr8_3:44435777-44435796 | Msa1289930:intron | 40.0% |
CTCAACCACATGGTTTAGTT+CGG | + | chr8_3:44435812-44435831 | Msa1289930:intron | 40.0% | |
!!! | GTTCTTGTGTCGGTTCTTTT+TGG | + | chr8_3:44436420-44436439 | Msa1289930:intron | 40.0% |
! | CGGTTCTTTTTGGATTGTAG+TGG | + | chr8_3:44436430-44436449 | Msa1289930:intron | 40.0% |
CATGCTTACGCATAAACAAC+AGG | - | chr8_3:44436600-44436619 | None:intergenic | 40.0% | |
TGTTTATGCGTAAGCATGTC+TGG | + | chr8_3:44436602-44436621 | Msa1289930:intron | 40.0% | |
CTTTGTACAGGTAGATGGTA+TGG | + | chr8_3:44436743-44436762 | Msa1289930:intron | 40.0% | |
GCAAGCTTGCAAATTTGCAA+AGG | + | chr8_3:44436782-44436801 | Msa1289930:CDS | 40.0% | |
CAAGTAACTTTACTCACCAG+GGG | - | chr8_3:44436828-44436847 | None:intergenic | 40.0% | |
GCAAGTAACTTTACTCACCA+GGG | - | chr8_3:44436829-44436848 | None:intergenic | 40.0% | |
TGCAAGTAACTTTACTCACC+AGG | - | chr8_3:44436830-44436849 | None:intergenic | 40.0% | |
TGTTAAACGATGTTCCGGAT+TGG | + | chr8_3:44436883-44436902 | Msa1289930:intron | 40.0% | |
TAGCAGATGAACAACCAATC+CGG | - | chr8_3:44436900-44436919 | None:intergenic | 40.0% | |
AAATGTTGGGGATTCTACAC+AGG | + | chr8_3:44437137-44437156 | Msa1289930:intron | 40.0% | |
!!! | GTTATGTCGTTTTCTCCTGT+GGG | + | chr8_3:44437159-44437178 | Msa1289930:intron | 40.0% |
!!! | TAATTCTTGCTGTTTTGGGG+AGG | + | chr8_3:44437313-44437332 | Msa1289930:intron | 40.0% |
!!! | AATTCTTGCTGTTTTGGGGA+GGG | + | chr8_3:44437314-44437333 | Msa1289930:intron | 40.0% |
GCTGAGTGTTTGATTCAACA+TGG | + | chr8_3:44437339-44437358 | Msa1289930:intron | 40.0% | |
GTGTTTGATTCAACATGGGA+AGG | + | chr8_3:44437344-44437363 | Msa1289930:intron | 40.0% | |
!! | ATTTGATCTGGTCTTGTCCT+AGG | + | chr8_3:44437500-44437519 | Msa1289930:intron | 40.0% |
AATGACAGATAGAAACGCGT+TGG | + | chr8_3:44437600-44437619 | Msa1289930:intron | 40.0% | |
ACGCTTAAGATGTTCATGTC+CGG | - | chr8_3:44437655-44437674 | None:intergenic | 40.0% | |
GAGACTCTAATACCAGTTCA+AGG | - | chr8_3:44437691-44437710 | None:intergenic | 40.0% | |
!! | AACTCCTAACAAGTTGGTCA+AGG | - | chr8_3:44437713-44437732 | None:intergenic | 40.0% |
GGATCAAACTCCTAACAAGT+TGG | - | chr8_3:44437719-44437738 | None:intergenic | 40.0% | |
GCCTTAATTTCTCTTCTACG+AGG | + | chr8_3:44437808-44437827 | Msa1289930:intron | 40.0% | |
CCCTCGTAGAAGAGAAATTA+AGG | - | chr8_3:44437812-44437831 | None:intergenic | 40.0% | |
GCAACATAAGGACTTACGAT+TGG | - | chr8_3:44437855-44437874 | None:intergenic | 40.0% | |
GAGGATAACCCATAATAGAC+TGG | + | chr8_3:44438050-44438069 | Msa1289930:intron | 40.0% | |
GGGATACTCCAGTCTATTAT+GGG | - | chr8_3:44438061-44438080 | None:intergenic | 40.0% | |
AGGGATACTCCAGTCTATTA+TGG | - | chr8_3:44438062-44438081 | None:intergenic | 40.0% | |
! | TTGCAAGATCCTACGTGTTT+TGG | + | chr8_3:44438543-44438562 | Msa1289930:intron | 40.0% |
ATCGTGTATTGAGATTGTGG+TGG | - | chr8_3:44438574-44438593 | None:intergenic | 40.0% | |
! | CACCGGTAAAAAGGTATGTT+TGG | - | chr8_3:44438763-44438782 | None:intergenic | 40.0% |
CAAGAATAATTGTTCGGCCA+GGG | - | chr8_3:44438817-44438836 | None:intergenic | 40.0% | |
AAGAACCAGCATATCACACT+GGG | - | chr8_3:44438879-44438898 | None:intergenic | 40.0% | |
TAAGAACCAGCATATCACAC+TGG | - | chr8_3:44438880-44438899 | None:intergenic | 40.0% | |
!! | GTGTGATATGCTGGTTCTTA+TGG | + | chr8_3:44438880-44438899 | Msa1289930:intron | 40.0% |
CTTAATTGTTCAAGGCTGTG+TGG | + | chr8_3:44438911-44438930 | Msa1289930:intron | 40.0% | |
TCTGTTGTGTGTGCTTGTTT+GGG | + | chr8_3:44438935-44438954 | Msa1289930:intron | 40.0% | |
! | AAGGTGCTTCAATCTTCTCT+GGG | + | chr8_3:44438976-44438995 | Msa1289930:intron | 40.0% |
AAAACAGCAAACAGAGAAGC+AGG | - | chr8_3:44439032-44439051 | None:intergenic | 40.0% | |
ATCTACCTAGGATTGGAAAG+GGG | - | chr8_3:44439224-44439243 | None:intergenic | 40.0% | |
GAATCTACCTAGGATTGGAA+AGG | - | chr8_3:44439226-44439245 | None:intergenic | 40.0% | |
ATGCAGAATCTACCTAGGAT+TGG | - | chr8_3:44439231-44439250 | None:intergenic | 40.0% | |
CAACAAATGTCAAATCCCGA+TGG | - | chr8_3:44439296-44439315 | None:intergenic | 40.0% | |
TGATCGATGATTGTCCATGT+TGG | - | chr8_3:44439837-44439856 | None:intergenic | 40.0% | |
ATTATTGTGAGAGAAGGGAG+GGG | - | chr8_3:44440358-44440377 | None:intergenic | 40.0% | |
TCTCCCAAAGTAAGGAAACT+AGG | - | chr8_3:44440562-44440581 | None:intergenic | 40.0% | |
AGAGACAATCTCCCAAAGTA+AGG | - | chr8_3:44440570-44440589 | None:intergenic | 40.0% | |
GGACATTATAGTCATGAGAG+AGG | - | chr8_3:44440753-44440772 | None:intergenic | 40.0% | |
ATGGACACTTACAGATACCA+TGG | + | chr8_3:44440784-44440803 | Msa1289930:CDS | 40.0% | |
GAGAGTAAGAAAGCTGGTAT+TGG | + | chr8_3:44440973-44440992 | Msa1289930:CDS | 40.0% | |
! | CACTGATCATCGAGTTTTTC+TGG | + | chr8_3:44441121-44441140 | Msa1289930:intron | 40.0% |
GTTTAAGTGGGTCTACACTA+AGG | + | chr8_3:44441191-44441210 | Msa1289930:intron | 40.0% | |
!! | TAAGGCTTTGTTTGCGAGTT+TGG | + | chr8_3:44441209-44441228 | Msa1289930:intron | 40.0% |
GGAAAAAAGGAATGAGCAAG+TGG | + | chr8_3:44441255-44441274 | Msa1289930:intron | 40.0% | |
TGAGCAAGTGGAAGAAATAG+AGG | + | chr8_3:44441267-44441286 | Msa1289930:intron | 40.0% | |
GAAATAGAGGAAAATGGGAG+AGG | + | chr8_3:44441280-44441299 | Msa1289930:intron | 40.0% | |
TTAGTTCCTCCAAATGAGGA+GGG | - | chr8_3:44441344-44441363 | None:intergenic | 40.0% | |
! | TTTAGTTCCTCCAAATGAGG+AGG | - | chr8_3:44441345-44441364 | None:intergenic | 40.0% |
! | TTGTATTGGAGGAGGGTTTT+AGG | + | chr8_3:44441368-44441387 | Msa1289930:intron | 40.0% |
! | TGTATTGGAGGAGGGTTTTA+GGG | + | chr8_3:44441369-44441388 | Msa1289930:intron | 40.0% |
!! | AGAAAAGGAAAGGCTTTGAG+GGG | - | chr8_3:44441556-44441575 | None:intergenic | 40.0% |
GAAGAAAAGGAAAGGCTTTG+AGG | - | chr8_3:44441558-44441577 | None:intergenic | 40.0% | |
!! | TTAGGCTTTGTTTGCGAGTT+TGG | - | chr8_3:44441585-44441604 | None:intergenic | 40.0% |
GAATACCAGGGACTTTATTG+AGG | + | chr8_3:44441629-44441648 | Msa1289930:intron | 40.0% | |
! | ATCACACCTTATTTCCCCAT+GGG | - | chr8_3:44441895-44441914 | None:intergenic | 40.0% |
! | AGCATTTGGGTGCTTTAGAT+TGG | + | chr8_3:44441995-44442014 | Msa1289930:intron | 40.0% |
GTAAATAGATCAGATGGGTC+TGG | - | chr8_3:44442299-44442318 | None:intergenic | 40.0% | |
TTAGGCAAAGCTTCACCAAT+AGG | - | chr8_3:44442800-44442819 | None:intergenic | 40.0% | |
!! | CGATAGTTGGTGGCACAATT+TGG | - | chr8_3:44434122-44434141 | None:intergenic | 45.0% |
TGAGGACGCTATTCGATAGT+TGG | - | chr8_3:44434135-44434154 | None:intergenic | 45.0% | |
GAGCCATTTGGATCTGATAC+TGG | - | chr8_3:44434338-44434357 | None:intergenic | 45.0% | |
AGAATCGCGATAGAGCCATT+TGG | - | chr8_3:44434350-44434369 | None:intergenic | 45.0% | |
GAAATAGGGTTTGAGAAGGG+TGG | - | chr8_3:44434391-44434410 | None:intergenic | 45.0% | |
!! | AACGGTGTCGTATTGAGGAA+AGG | - | chr8_3:44434413-44434432 | None:intergenic | 45.0% |
!! | AATGGAACGGTGTCGTATTG+AGG | - | chr8_3:44434418-44434437 | None:intergenic | 45.0% |
TTCGGTGGAAGAGGAAGAAA+TGG | - | chr8_3:44434436-44434455 | None:intergenic | 45.0% | |
CATGTCCTTCTTCAACGACA+TGG | + | chr8_3:44434542-44434561 | Msa1289930:CDS | 45.0% | |
GAGAACCATGTCGTTGAAGA+AGG | - | chr8_3:44434550-44434569 | None:intergenic | 45.0% | |
TACAAAGCCAAACTCATCCG+CGG | + | chr8_3:44434603-44434622 | Msa1289930:CDS | 45.0% | |
AGCTTCCATTCCAACAGCAA+CGG | - | chr8_3:44434658-44434677 | None:intergenic | 45.0% | |
! | CACTGTACTTTTCTCTGCAG+GGG | + | chr8_3:44434720-44434739 | Msa1289930:CDS | 45.0% |
AAGGAAAGATGGGTGTTCCA+AGG | + | chr8_3:44434779-44434798 | Msa1289930:CDS | 45.0% | |
AGGAAAGATGGGTGTTCCAA+GGG | + | chr8_3:44434780-44434799 | Msa1289930:CDS | 45.0% | |
!! | AGGAAGGAAGGTGGGTTTTA+TGG | + | chr8_3:44434828-44434847 | Msa1289930:CDS | 45.0% |
!! | AAGGAAGGTGGGTTTTATGG+TGG | + | chr8_3:44434831-44434850 | Msa1289930:CDS | 45.0% |
!!! | GTGGGTTTTATGGTGGACAT+GGG | + | chr8_3:44434838-44434857 | Msa1289930:CDS | 45.0% |
!! | TATGGTGGACATGGGATTGT+TGG | + | chr8_3:44434846-44434865 | Msa1289930:CDS | 45.0% |
GATTCCTCTTGGAGTTGGAT+TGG | + | chr8_3:44434875-44434894 | Msa1289930:CDS | 45.0% | |
AAAGCCAATCCAACTCCAAG+AGG | - | chr8_3:44434882-44434901 | None:intergenic | 45.0% | |
!!! | CTTGGAGTTGGATTGGCTTT+TGG | + | chr8_3:44434882-44434901 | Msa1289930:CDS | 45.0% |
CTCTTAATATCGCCGCTCTT+TGG | + | chr8_3:44434985-44435004 | Msa1289930:CDS | 45.0% | |
AATGTGGTACATAAGCCACG+AGG | + | chr8_3:44435470-44435489 | Msa1289930:intron | 45.0% | |
AGGAATGAACTTCGTATGCG+TGG | + | chr8_3:44435677-44435696 | Msa1289930:intron | 45.0% | |
ATGAACTTCGTATGCGTGGT+AGG | + | chr8_3:44435681-44435700 | Msa1289930:intron | 45.0% | |
TGAACTTCGTATGCGTGGTA+GGG | + | chr8_3:44435682-44435701 | Msa1289930:intron | 45.0% | |
!!! | TTGCGGTTTTCGGTTTGGAT+TGG | - | chr8_3:44435752-44435771 | None:intergenic | 45.0% |
GCAAACCGAACTAAACCATG+TGG | - | chr8_3:44435820-44435839 | None:intergenic | 45.0% | |
!! | TTGCGTTGGTTCAGTTGTTG+TGG | - | chr8_3:44436296-44436315 | None:intergenic | 45.0% |
!!! | TGCGGTTTGGTTCGGTTTTT+AGG | - | chr8_3:44436365-44436384 | None:intergenic | 45.0% |
ATGCTTAGCACGTGCATATG+TGG | - | chr8_3:44436632-44436651 | None:intergenic | 45.0% | |
!!! | GGTTATGTCGTTTTCTCCTG+TGG | + | chr8_3:44437158-44437177 | Msa1289930:intron | 45.0% |
!!! | ATTCTTGCTGTTTTGGGGAG+GGG | + | chr8_3:44437315-44437334 | Msa1289930:intron | 45.0% |
! | TGGGAATACTCTGGGTTTTC+TGG | + | chr8_3:44437423-44437442 | Msa1289930:intron | 45.0% |
CACATCATCACTCGGTCAAT+TGG | - | chr8_3:44437470-44437489 | None:intergenic | 45.0% | |
TGCGAACTGCTCATTTGATC+TGG | + | chr8_3:44437488-44437507 | Msa1289930:intron | 45.0% | |
TTAGCTTACGACAGGTCCTA+TGG | - | chr8_3:44437553-44437572 | None:intergenic | 45.0% | |
TAACAAGGCAGTCCTTGAAC+TGG | + | chr8_3:44437676-44437695 | Msa1289930:intron | 45.0% | |
! | GTCTCCTTGACCAACTTGTT+AGG | + | chr8_3:44437706-44437725 | Msa1289930:intron | 45.0% |
CTAGAAAAACAGGGGTTGCA+AGG | - | chr8_3:44437740-44437759 | None:intergenic | 45.0% | |
CCAAGGCTCTCGAATTTCTT+GGG | - | chr8_3:44437966-44437985 | None:intergenic | 45.0% | |
CCAAGAAATTCGAGAGCCTT+GGG | + | chr8_3:44437964-44437983 | Msa1289930:intron | 45.0% | |
GAGCGGTAATGAGAAAACAC+CGG | - | chr8_3:44438780-44438799 | None:intergenic | 45.0% | |
ATAATTGTTCGGCCAGGGTA+AGG | - | chr8_3:44438812-44438831 | None:intergenic | 45.0% | |
GCAAGAATAATTGTTCGGCC+AGG | - | chr8_3:44438818-44438837 | None:intergenic | 45.0% | |
AGAACCAGCATATCACACTG+GGG | - | chr8_3:44438878-44438897 | None:intergenic | 45.0% | |
CTCTGTTGTGTGTGCTTGTT+TGG | + | chr8_3:44438934-44438953 | Msa1289930:intron | 45.0% | |
CTTGTTTGGGTGGTCTTTGA+TGG | + | chr8_3:44438948-44438967 | Msa1289930:intron | 45.0% | |
!! | GAAGGTGCTTCAATCTTCTC+TGG | + | chr8_3:44438975-44438994 | Msa1289930:intron | 45.0% |
AAGACACACAAACTGTGTGC+TGG | - | chr8_3:44439197-44439216 | None:intergenic | 45.0% | |
TAAACCCCCTTTCCAATCCT+AGG | + | chr8_3:44439216-44439235 | Msa1289930:intron | 45.0% | |
TCTACCTAGGATTGGAAAGG+GGG | - | chr8_3:44439223-44439242 | None:intergenic | 45.0% | |
TCGAGGACCAACTCTCTAAA+AGG | - | chr8_3:44439267-44439286 | None:intergenic | 45.0% | |
!!! | TGGGATTTTAGGATCGTGGT+TGG | + | chr8_3:44439809-44439828 | Msa1289930:intron | 45.0% |
CGACTGTTGTAGTCAGTTGA+AGG | + | chr8_3:44440004-44440023 | Msa1289930:intron | 45.0% | |
ACTTAGCGTGAAGAAGATGC+AGG | + | chr8_3:44440216-44440235 | Msa1289930:intron | 45.0% | |
CTTAGCGTGAAGAAGATGCA+GGG | + | chr8_3:44440217-44440236 | Msa1289930:intron | 45.0% | |
TTAGCGTGAAGAAGATGCAG+GGG | + | chr8_3:44440218-44440237 | Msa1289930:intron | 45.0% | |
TGAAGAAGATGCAGGGGAAA+AGG | + | chr8_3:44440224-44440243 | Msa1289930:intron | 45.0% | |
GAGGGGTAAATAATAGCCCT+TGG | - | chr8_3:44440329-44440348 | None:intergenic | 45.0% | |
TGTGACCAATTCCACCTAGT+GGG | + | chr8_3:44440444-44440463 | Msa1289930:intron | 45.0% | |
GGCTAGGTTGTTGGTATTTG+TGG | + | chr8_3:44440471-44440490 | Msa1289930:intron | 45.0% | |
! | TGAGATTAGCGGTGTTAGAC+AGG | + | chr8_3:44440849-44440868 | Msa1289930:CDS | 45.0% |
!! | GCTTTGTTTGCGAGTTTGGA+GGG | + | chr8_3:44441213-44441232 | Msa1289930:intron | 45.0% |
! | CTTTGTTTGCGAGTTTGGAG+GGG | + | chr8_3:44441214-44441233 | Msa1289930:intron | 45.0% |
ATAGAGGAAAATGGGAGAGG+AGG | + | chr8_3:44441283-44441302 | Msa1289930:intron | 45.0% | |
TAGAGGAAAATGGGAGAGGA+GGG | + | chr8_3:44441284-44441303 | Msa1289930:intron | 45.0% | |
ACAAAACCCTCCTCATTTGG+AGG | + | chr8_3:44441335-44441354 | Msa1289930:intron | 45.0% | |
!! | GTATTGGAGGAGGGTTTTAG+GGG | + | chr8_3:44441370-44441389 | Msa1289930:intron | 45.0% |
!!! | TATTGGAGGAGGGTTTTAGG+GGG | + | chr8_3:44441371-44441390 | Msa1289930:intron | 45.0% |
TTGGAGGGGAAGAAAAGGAA+AGG | - | chr8_3:44441566-44441585 | None:intergenic | 45.0% | |
! | CTTTGTTTGCGAGTTTGGAG+GGG | - | chr8_3:44441214-44441233 | None:intergenic | 45.0% |
!! | GCTTTGTTTGCGAGTTTGGA+GGG | - | chr8_3:44441213-44441232 | None:intergenic | 45.0% |
TACCAGGGACTTTATTGAGG+TGG | + | chr8_3:44441632-44441651 | Msa1289930:intron | 45.0% | |
ACAACATAACAGACTGCCCA+TGG | + | chr8_3:44441876-44441895 | Msa1289930:intron | 45.0% | |
CAACATAACAGACTGCCCAT+GGG | + | chr8_3:44441877-44441896 | Msa1289930:intron | 45.0% | |
AACATAACAGACTGCCCATG+GGG | + | chr8_3:44441878-44441897 | Msa1289930:intron | 45.0% | |
! | CATCACACCTTATTTCCCCA+TGG | - | chr8_3:44441896-44441915 | None:intergenic | 45.0% |
GGGGAAATAAGGTGTGATGA+AGG | + | chr8_3:44441897-44441916 | Msa1289930:intron | 45.0% | |
! | TTGGGTGCTTTAGATTGGAC+TGG | + | chr8_3:44442000-44442019 | Msa1289930:intron | 45.0% |
! | TGGGTGCTTTAGATTGGACT+GGG | + | chr8_3:44442001-44442020 | Msa1289930:intron | 45.0% |
! | TGCTTTAGATTGGACTGGGT+AGG | + | chr8_3:44442005-44442024 | Msa1289930:intron | 45.0% |
! | TTTAGATTGGACTGGGTAGG+AGG | + | chr8_3:44442008-44442027 | Msa1289930:intron | 45.0% |
!! | GGCTTCGTCAACTTGTTTTC+TGG | - | chr8_3:44442135-44442154 | None:intergenic | 45.0% |
CAGATCATCTCTCTGCCTAT+TGG | + | chr8_3:44442782-44442801 | Msa1289930:three_prime_UTR | 45.0% | |
!!! | TATTTGTTTTTTTTTTTTTT+TGG | + | chr8_3:44435084-44435103 | Msa1289930:intron | 5.0% |
!! | AAAAAAAAAAAAAAAGATAA+AGG | - | chr8_3:44438176-44438195 | None:intergenic | 5.0% |
GGACGCTATTCGATAGTTGG+TGG | - | chr8_3:44434132-44434151 | None:intergenic | 50.0% | |
AAGGGTGGATCCGAATTGAG+AGG | - | chr8_3:44434376-44434395 | None:intergenic | 50.0% | |
GGTTTCGACGGTTAGGGTTT+CGG | - | chr8_3:44434454-44434473 | None:intergenic | 50.0% | |
GATGGAGGTTTCGACGGTTA+GGG | - | chr8_3:44434460-44434479 | None:intergenic | 50.0% | |
GAAAGGGATGGAGGTTTCGA+CGG | - | chr8_3:44434466-44434485 | None:intergenic | 50.0% | |
GTTGTGGGAAGTGAAAGGGA+TGG | - | chr8_3:44434478-44434497 | None:intergenic | 50.0% | |
CGCAGTTGTGGGAAGTGAAA+GGG | - | chr8_3:44434482-44434501 | None:intergenic | 50.0% | |
TCGCAGTTGTGGGAAGTGAA+AGG | - | chr8_3:44434483-44434502 | None:intergenic | 50.0% | |
GAAGAAGGACATGAGTTCGG+AGG | - | chr8_3:44434535-44434554 | None:intergenic | 50.0% | |
AGTCAGCAGCGATCTCCATA+CGG | - | chr8_3:44434578-44434597 | None:intergenic | 50.0% | |
GGTTTCTGCCATCTCTACGA+CGG | + | chr8_3:44434624-44434643 | Msa1289930:CDS | 50.0% | |
! | TGTACTTTTCTCTGCAGGGG+TGG | + | chr8_3:44434723-44434742 | Msa1289930:CDS | 50.0% |
GGAAAGATGGGTGTTCCAAG+GGG | + | chr8_3:44434781-44434800 | Msa1289930:CDS | 50.0% | |
!!! | GGTGGGTTTTATGGTGGACA+TGG | + | chr8_3:44434837-44434856 | Msa1289930:CDS | 50.0% |
GTTGGAGCTCAGATTCCTCT+TGG | + | chr8_3:44434864-44434883 | Msa1289930:CDS | 50.0% | |
GCTCAGATTCCTCTTGGAGT+TGG | + | chr8_3:44434870-44434889 | Msa1289930:CDS | 50.0% | |
!! | TGGTGATGGTGCTGCTAATC+AGG | + | chr8_3:44434947-44434966 | Msa1289930:CDS | 50.0% |
!! | GGTGATGGTGCTGCTAATCA+GGG | + | chr8_3:44434948-44434967 | Msa1289930:CDS | 50.0% |
AGCAGGAAGATCCCAAAGAG+CGG | - | chr8_3:44435000-44435019 | None:intergenic | 50.0% | |
AGTCCTGCGTATTACAAGCG+TGG | + | chr8_3:44435167-44435186 | Msa1289930:CDS | 50.0% | |
TCTCCACGCTTGTAATACGC+AGG | - | chr8_3:44435173-44435192 | None:intergenic | 50.0% | |
AAGCGTGGAGATTATGCTCC+TGG | + | chr8_3:44435182-44435201 | Msa1289930:CDS | 50.0% | |
GGACTTCAGCCGCTAACAAT+TGG | - | chr8_3:44435537-44435556 | None:intergenic | 50.0% | |
!! | TTTGGGTTGGCCTCTCTTGA+TGG | - | chr8_3:44435558-44435577 | None:intergenic | 50.0% |
GAACTTCGTATGCGTGGTAG+GGG | + | chr8_3:44435683-44435702 | Msa1289930:intron | 50.0% | |
!! | GCATGTGGTTTGGTTTGCGT+TGG | - | chr8_3:44436310-44436329 | None:intergenic | 50.0% |
!! | ATTTAGGGGTGTTCGTGGTG+CGG | - | chr8_3:44436383-44436402 | None:intergenic | 50.0% |
!! | ACGCAATTTAGGGGTGTTCG+TGG | - | chr8_3:44436388-44436407 | None:intergenic | 50.0% |
ACGAACACCCCTAAATTGCG+TGG | + | chr8_3:44436387-44436406 | Msa1289930:intron | 50.0% | |
!! | TGCTTTGAAGAATGGTCCCC+TGG | + | chr8_3:44436809-44436828 | Msa1289930:CDS | 50.0% |
GCAGTTCGCACATCATCACT+CGG | - | chr8_3:44437478-44437497 | None:intergenic | 50.0% | |
CCTGCTTCTTAGCTTACGAC+AGG | - | chr8_3:44437561-44437580 | None:intergenic | 50.0% | |
CCTGTCGTAAGCTAAGAAGC+AGG | + | chr8_3:44437558-44437577 | Msa1289930:intron | 50.0% | |
CCCAAGAAATTCGAGAGCCT+TGG | + | chr8_3:44437963-44437982 | Msa1289930:intron | 50.0% | |
CCCAAGGCTCTCGAATTTCT+TGG | - | chr8_3:44437967-44437986 | None:intergenic | 50.0% | |
GTGGTGACACCAAAACACGT+AGG | - | chr8_3:44438555-44438574 | None:intergenic | 50.0% | |
GGGTAAGGACAAGAGATGAG+CGG | - | chr8_3:44438797-44438816 | None:intergenic | 50.0% | |
CTCATCTCTTGTCCTTACCC+TGG | + | chr8_3:44438797-44438816 | Msa1289930:intron | 50.0% | |
AGCATATCACACTGGGGTGA+TGG | - | chr8_3:44438872-44438891 | None:intergenic | 50.0% | |
ATCACCCCAGTGTGATATGC+TGG | + | chr8_3:44438871-44438890 | Msa1289930:intron | 50.0% | |
GTTGTGTGTGCTTGTTTGGG+TGG | + | chr8_3:44438938-44438957 | Msa1289930:intron | 50.0% | |
!! | GTGGTCTTTGATGGCGAAGA+AGG | + | chr8_3:44438957-44438976 | Msa1289930:intron | 50.0% |
TCAATCTTCTCTGGGTGCTC+TGG | + | chr8_3:44438984-44439003 | Msa1289930:intron | 50.0% | |
!! | TCTAGTGCTGGTAGCATCTC+TGG | + | chr8_3:44439067-44439086 | Msa1289930:intron | 50.0% |
GTCGCATGCAGAATCTACCT+AGG | - | chr8_3:44439236-44439255 | None:intergenic | 50.0% | |
! | TAGAGAGTTGGTCCTCGACA+TGG | + | chr8_3:44439269-44439288 | Msa1289930:intron | 50.0% |
GAGGAGTAAACAGTAGCCCT+TGG | + | chr8_3:44439648-44439667 | Msa1289930:intron | 50.0% | |
GATGCAGGGGAAAAGGACAA+AGG | + | chr8_3:44440231-44440250 | Msa1289930:intron | 50.0% | |
TGAGAGAAGGGAGGGGTAAA+GGG | - | chr8_3:44440351-44440370 | None:intergenic | 50.0% | |
GTGTGACCAATTCCACCTAG+TGG | + | chr8_3:44440443-44440462 | Msa1289930:intron | 50.0% | |
GTGACCAATTCCACCTAGTG+GGG | + | chr8_3:44440445-44440464 | Msa1289930:intron | 50.0% | |
CATACCCCACTAGGTGGAAT+TGG | - | chr8_3:44440452-44440471 | None:intergenic | 50.0% | |
CAATTCCACCTAGTGGGGTA+TGG | + | chr8_3:44440450-44440469 | Msa1289930:intron | 50.0% | |
!! | GGCTTTGTTTGCGAGTTTGG+AGG | + | chr8_3:44441212-44441231 | Msa1289930:intron | 50.0% |
TTTGCGAGTTTGGAGGGGAA+GGG | + | chr8_3:44441219-44441238 | Msa1289930:intron | 50.0% | |
AGGGGAAGGCTTGGGAAAAA+AGG | + | chr8_3:44441242-44441261 | Msa1289930:intron | 50.0% | |
AAAATGGGAGAGGAGGGCTT+TGG | + | chr8_3:44441290-44441309 | Msa1289930:intron | 50.0% | |
AAATGGGAGAGGAGGGCTTT+GGG | + | chr8_3:44441291-44441310 | Msa1289930:intron | 50.0% | |
!!! | AGGAGGGTTTTAGGGGGTTT+TGG | + | chr8_3:44441377-44441396 | Msa1289930:intron | 50.0% |
!!! | AGGGTTTTAGGGGGTTTTGG+AGG | + | chr8_3:44441380-44441399 | Msa1289930:intron | 50.0% |
!!! | GGGTTTTAGGGGGTTTTGGA+GGG | + | chr8_3:44441381-44441400 | Msa1289930:intron | 50.0% |
CGAGTTTGGAGGGGAAGAAA+AGG | - | chr8_3:44441571-44441590 | None:intergenic | 50.0% | |
!! | GGCTTTGTTTGCGAGTTTGG+AGG | - | chr8_3:44441212-44441231 | None:intergenic | 50.0% |
CACCACCTCAATAAAGTCCC+TGG | - | chr8_3:44441637-44441656 | None:intergenic | 50.0% | |
CAGGGACTTTATTGAGGTGG+TGG | + | chr8_3:44441635-44441654 | Msa1289930:intron | 50.0% | |
CAGTTATTAGGGGGGAGTAG+TGG | + | chr8_3:44441691-44441710 | Msa1289930:intron | 50.0% | |
AGACTGCCCATGGGGAAATA+AGG | + | chr8_3:44441886-44441905 | Msa1289930:intron | 50.0% | |
CGAAGCCATTGCCAAAGCAA+AGG | + | chr8_3:44442148-44442167 | Msa1289930:CDS | 50.0% | |
! | GGTCTGGCATTTGACTTTCC+TGG | - | chr8_3:44442283-44442302 | None:intergenic | 50.0% |
TGTTAAAGGCTTAGGGGTCG+AGG | + | chr8_3:44442328-44442347 | Msa1289930:CDS | 50.0% | |
CAACGGAAGAAGACGCTCAA+AGG | - | chr8_3:44442717-44442736 | None:intergenic | 50.0% | |
GGTTAGGGTTTCGGTGGAAG+AGG | - | chr8_3:44434445-44434464 | None:intergenic | 55.0% | |
TTCGACGGTTAGGGTTTCGG+TGG | - | chr8_3:44434451-44434470 | None:intergenic | 55.0% | |
GGATGGAGGTTTCGACGGTT+AGG | - | chr8_3:44434461-44434480 | None:intergenic | 55.0% | |
GTGGGAAGTGAAAGGGATGG+AGG | - | chr8_3:44434475-44434494 | None:intergenic | 55.0% | |
GGAAGGTGGTTCGCAGTTGT+GGG | - | chr8_3:44434493-44434512 | None:intergenic | 55.0% | |
TGGAAGGTGGTTCGCAGTTG+TGG | - | chr8_3:44434494-44434513 | None:intergenic | 55.0% | |
GAAGGACATGAGTTCGGAGG+CGG | - | chr8_3:44434532-44434551 | None:intergenic | 55.0% | |
CATGGTTCTCATGCGCCGTA+TGG | + | chr8_3:44434560-44434579 | Msa1289930:CDS | 55.0% | |
GCAGAAACCGCGGATGAGTT+TGG | - | chr8_3:44434613-44434632 | None:intergenic | 55.0% | |
CGTAGAGATGGCAGAAACCG+CGG | - | chr8_3:44434623-44434642 | None:intergenic | 55.0% | |
CTTCCTGACCGTCGTAGAGA+TGG | - | chr8_3:44434635-44434654 | None:intergenic | 55.0% | |
! | GGAAGCCGTTGCTGTTGGAA+TGG | + | chr8_3:44434650-44434669 | Msa1289930:CDS | 55.0% |
GATGGGTGTTCCAAGGGGAA+AGG | + | chr8_3:44434786-44434805 | Msa1289930:CDS | 55.0% | |
CATGGAACCACCTTTCCCCT+TGG | - | chr8_3:44434799-44434818 | None:intergenic | 55.0% | |
ATGGAATGGGGACTGCTGAG+TGG | + | chr8_3:44435132-44435151 | Msa1289930:CDS | 55.0% | |
CACGAGGCTCTCTCACACAA+CGG | + | chr8_3:44435486-44435505 | Msa1289930:intron | 55.0% | |
! | GCTCTCTCACACAACGGACT+AGG | + | chr8_3:44435492-44435511 | Msa1289930:intron | 55.0% |
CGGCTGAAGTCCATCAAGAG+AGG | + | chr8_3:44435545-44435564 | Msa1289930:intron | 55.0% | |
!! | GTTCGTGGTGCGGTTTGGTT+CGG | - | chr8_3:44436373-44436392 | None:intergenic | 55.0% |
TCTTGGAAGGGAGAGACCCA+AGG | - | chr8_3:44437983-44438002 | None:intergenic | 55.0% | |
CTTCTCTGGGTGCTCTGGTT+TGG | + | chr8_3:44438989-44439008 | Msa1289930:intron | 55.0% | |
CAGCAAACAGAGAAGCAGGC+AGG | - | chr8_3:44439028-44439047 | None:intergenic | 55.0% | |
! | CTGGTAGCATCTCTGGAGAC+TGG | + | chr8_3:44439074-44439093 | Msa1289930:intron | 55.0% |
! | GATCGTGGTTGGCTCCAACA+TGG | + | chr8_3:44439820-44439839 | Msa1289930:intron | 55.0% |
AGAAGGGAGGGGTAAAGGGA+GGG | - | chr8_3:44440347-44440366 | None:intergenic | 55.0% | |
GTGAGAGAAGGGAGGGGTAA+AGG | - | chr8_3:44440352-44440371 | None:intergenic | 55.0% | |
CAACCTAGCCATACCCCACT+AGG | - | chr8_3:44440461-44440480 | None:intergenic | 55.0% | |
GTGGGGTATGGCTAGGTTGT+TGG | + | chr8_3:44440462-44440481 | Msa1289930:intron | 55.0% | |
GATCAGACATGGAGTGGCCA+TGG | - | chr8_3:44440804-44440823 | None:intergenic | 55.0% | |
TGGCCACTCCATGTCTGATC+CGG | + | chr8_3:44440804-44440823 | Msa1289930:CDS | 55.0% | |
CGCTAATCTCATCACGCGTG+CGG | - | chr8_3:44440840-44440859 | None:intergenic | 55.0% | |
CGCACGCGTGATGAGATTAG+CGG | + | chr8_3:44440838-44440857 | Msa1289930:CDS | 55.0% | |
GTTTGCGAGTTTGGAGGGGA+AGG | + | chr8_3:44441218-44441237 | Msa1289930:intron | 55.0% | |
AATGGGAGAGGAGGGCTTTG+GGG | + | chr8_3:44441292-44441311 | Msa1289930:intron | 55.0% | |
AGGTGCAGGGAGTGAATACC+AGG | + | chr8_3:44441616-44441635 | Msa1289930:intron | 55.0% | |
GGTGCAGGGAGTGAATACCA+GGG | + | chr8_3:44441617-44441636 | Msa1289930:intron | 55.0% | |
! | ATTAGGGGGGAGTAGTGGAG+AGG | + | chr8_3:44441696-44441715 | Msa1289930:intron | 55.0% |
!! | TGCAGGCATGTGGTGCTGAT+AGG | + | chr8_3:44442651-44442670 | Msa1289930:intron | 55.0% |
!! | GTTTGGACGGTGGTGGAAGG+TGG | - | chr8_3:44434507-44434526 | None:intergenic | 60.0% |
!! | GTGGTTTGGACGGTGGTGGA+AGG | - | chr8_3:44434510-44434529 | None:intergenic | 60.0% |
! | TTCGGAGGCGGTGGTTTGGA+CGG | - | chr8_3:44434520-44434539 | None:intergenic | 60.0% |
TGAGTTCGGAGGCGGTGGTT+TGG | - | chr8_3:44434524-44434543 | None:intergenic | 60.0% | |
CTGCCATCTCTACGACGGTC+AGG | + | chr8_3:44434629-44434648 | Msa1289930:CDS | 60.0% | |
GGTCAGGAAGCCGTTGCTGT+TGG | + | chr8_3:44434645-44434664 | Msa1289930:CDS | 60.0% | |
GGGTGTTCCAAGGGGAAAGG+TGG | + | chr8_3:44434789-44434808 | Msa1289930:CDS | 60.0% | |
CGTTGTGTGAGAGAGCCTCG+TGG | - | chr8_3:44435488-44435507 | None:intergenic | 60.0% | |
TGGTCCTCGACATGGCCCAT+CGG | + | chr8_3:44439277-44439296 | Msa1289930:intron | 60.0% | |
AATCCCGATGGGCCATGTCG+AGG | - | chr8_3:44439284-44439303 | None:intergenic | 60.0% | |
GAAGGGAGGGGTAAAGGGAG+GGG | - | chr8_3:44440346-44440365 | None:intergenic | 60.0% | |
GAGAAGGGAGGGGTAAAGGG+AGG | - | chr8_3:44440348-44440367 | None:intergenic | 60.0% | |
CCTAGCCATACCCCACTAGG+TGG | - | chr8_3:44440458-44440477 | None:intergenic | 60.0% | |
CCACCTAGTGGGGTATGGCT+AGG | + | chr8_3:44440455-44440474 | Msa1289930:intron | 60.0% | |
GGCCACTCCATGTCTGATCC+GGG | + | chr8_3:44440805-44440824 | Msa1289930:CDS | 60.0% | |
TGCCCGGATCAGACATGGAG+TGG | - | chr8_3:44440810-44440829 | None:intergenic | 60.0% | |
TGTGCTGCCCGGATCAGACA+TGG | - | chr8_3:44440815-44440834 | None:intergenic | 60.0% | |
CGAGTTTGGAGGGGAAGGGA+GGG | + | chr8_3:44441223-44441242 | Msa1289930:intron | 60.0% | |
GAGTTTGGAGGGGAAGGGAG+GGG | + | chr8_3:44441224-44441243 | Msa1289930:intron | 60.0% | |
! | ATGGGAGAGGAGGGCTTTGG+GGG | + | chr8_3:44441293-44441312 | Msa1289930:intron | 60.0% |
! | AGGTGGTGGCAGAGAGAGAG+AGG | + | chr8_3:44441649-44441668 | Msa1289930:intron | 60.0% |
! | GGTGGTGGCAGAGAGAGAGA+GGG | + | chr8_3:44441650-44441669 | Msa1289930:intron | 60.0% |
GTGGTGGCAGAGAGAGAGAG+GGG | + | chr8_3:44441651-44441670 | Msa1289930:intron | 60.0% | |
GGACATGAGTTCGGAGGCGG+TGG | - | chr8_3:44434529-44434548 | None:intergenic | 65.0% | |
! | GGGGTGTTCGTGGTGCGGTT+TGG | - | chr8_3:44436378-44436397 | None:intergenic | 65.0% |
GGTCCTCGACATGGCCCATC+GGG | + | chr8_3:44439278-44439297 | Msa1289930:intron | 65.0% | |
GCGAGTTTGGAGGGGAAGGG+AGG | + | chr8_3:44441222-44441241 | Msa1289930:intron | 65.0% | |
TTGGAGGGGAAGGGAGGGGA+AGG | + | chr8_3:44441228-44441247 | Msa1289930:intron | 65.0% | |
GGGAAGGGAGGGGAAGGCTT+GGG | + | chr8_3:44441234-44441253 | Msa1289930:intron | 65.0% | |
!! | TGGGAGAGGAGGGCTTTGGG+GGG | + | chr8_3:44441294-44441313 | Msa1289930:intron | 65.0% |
TGGCAGAGAGAGAGAGGGGC+TGG | + | chr8_3:44441655-44441674 | Msa1289930:intron | 65.0% | |
! | GGCGGTGGTTTGGACGGTGG+TGG | - | chr8_3:44434514-44434533 | None:intergenic | 70.0% |
! | GGAGGCGGTGGTTTGGACGG+TGG | - | chr8_3:44434517-44434536 | None:intergenic | 70.0% |
CGCGTGCGGTATGTGCTGCC+CGG | - | chr8_3:44440826-44440845 | None:intergenic | 70.0% | |
GGGGAAGGGAGGGGAAGGCT+TGG | + | chr8_3:44441233-44441252 | Msa1289930:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 44433994 | 44443254 | 44433994 | ID=Msa1289930;Name=Msa1289930 |
chr8_3 | mRNA | 44433994 | 44443254 | 44433994 | ID=Msa1289930-mRNA-1;Parent=Msa1289930;Name=Msa1289930-mRNA-1;_AED=0.06;_eAED=0.06;_QI=305|1|1|1|0.77|0.7|10|554|394 |
chr8_3 | exon | 44433994 | 44434012 | 44433994 | ID=Msa1289930-mRNA-1:exon:12185;Parent=Msa1289930-mRNA-1 |
chr8_3 | exon | 44434045 | 44434071 | 44434045 | ID=Msa1289930-mRNA-1:exon:12186;Parent=Msa1289930-mRNA-1 |
chr8_3 | exon | 44434092 | 44435044 | 44434092 | ID=Msa1289930-mRNA-1:exon:12187;Parent=Msa1289930-mRNA-1 |
chr8_3 | exon | 44435132 | 44435211 | 44435132 | ID=Msa1289930-mRNA-1:exon:12188;Parent=Msa1289930-mRNA-1 |
chr8_3 | exon | 44436753 | 44436830 | 44436753 | ID=Msa1289930-mRNA-1:exon:12189;Parent=Msa1289930-mRNA-1 |
chr8_3 | exon | 44440775 | 44440870 | 44440775 | ID=Msa1289930-mRNA-1:exon:12190;Parent=Msa1289930-mRNA-1 |
chr8_3 | exon | 44440956 | 44441027 | 44440956 | ID=Msa1289930-mRNA-1:exon:12191;Parent=Msa1289930-mRNA-1 |
chr8_3 | exon | 44442116 | 44442169 | 44442116 | ID=Msa1289930-mRNA-1:exon:12192;Parent=Msa1289930-mRNA-1 |
chr8_3 | exon | 44442284 | 44442349 | 44442284 | ID=Msa1289930-mRNA-1:exon:12193;Parent=Msa1289930-mRNA-1 |
chr8_3 | exon | 44442656 | 44443254 | 44442656 | ID=Msa1289930-mRNA-1:exon:12194;Parent=Msa1289930-mRNA-1 |
chr8_3 | five_prime_UTR | 44433994 | 44434012 | 44433994 | ID=Msa1289930-mRNA-1:five_prime_utr;Parent=Msa1289930-mRNA-1 |
chr8_3 | five_prime_UTR | 44434045 | 44434071 | 44434045 | ID=Msa1289930-mRNA-1:five_prime_utr;Parent=Msa1289930-mRNA-1 |
chr8_3 | five_prime_UTR | 44434092 | 44434350 | 44434092 | ID=Msa1289930-mRNA-1:five_prime_utr;Parent=Msa1289930-mRNA-1 |
chr8_3 | CDS | 44434351 | 44435044 | 44434351 | ID=Msa1289930-mRNA-1:cds;Parent=Msa1289930-mRNA-1 |
chr8_3 | CDS | 44435132 | 44435211 | 44435132 | ID=Msa1289930-mRNA-1:cds;Parent=Msa1289930-mRNA-1 |
chr8_3 | CDS | 44436753 | 44436830 | 44436753 | ID=Msa1289930-mRNA-1:cds;Parent=Msa1289930-mRNA-1 |
chr8_3 | CDS | 44440775 | 44440870 | 44440775 | ID=Msa1289930-mRNA-1:cds;Parent=Msa1289930-mRNA-1 |
chr8_3 | CDS | 44440956 | 44441027 | 44440956 | ID=Msa1289930-mRNA-1:cds;Parent=Msa1289930-mRNA-1 |
chr8_3 | CDS | 44442116 | 44442169 | 44442116 | ID=Msa1289930-mRNA-1:cds;Parent=Msa1289930-mRNA-1 |
chr8_3 | CDS | 44442284 | 44442349 | 44442284 | ID=Msa1289930-mRNA-1:cds;Parent=Msa1289930-mRNA-1 |
chr8_3 | CDS | 44442656 | 44442700 | 44442656 | ID=Msa1289930-mRNA-1:cds;Parent=Msa1289930-mRNA-1 |
chr8_3 | three_prime_UTR | 44442701 | 44443254 | 44442701 | ID=Msa1289930-mRNA-1:three_prime_utr;Parent=Msa1289930-mRNA-1 |
Gene Sequence |
Protein sequence |