Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1295970 | A0A396GPQ1 | 75.493 | 355 | 75 | 5 | 1 | 347 | 1 | 351 | 6.12e-157 | 455 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1203030 | Msa1295970 | 0.923035 | 4.510855e-89 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1295970 | MtrunA17_Chr8g0373411 | 75.493 | 355 | 75 | 5 | 1 | 347 | 1 | 351 | 1.18e-160 | 455 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 92 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGACTTTCGATTTGGAGTA+TGG | 0.269103 | 8_3:+54507852 | None:intergenic |
| ACGACTTTCGATTTGGAGTA+TGG | 0.269103 | 8_3:+54508242 | None:intergenic |
| TCTTCTTACTAAAGATGATT+TGG | 0.269999 | 8_3:-54507560 | Msa1295970:CDS |
| CGAATCAACCATTGTCAAAA+TGG | 0.291216 | 8_3:+54507888 | None:intergenic |
| TAATAGCGATGGAAAACTTT+TGG | 0.298332 | 8_3:+54508384 | None:intergenic |
| AAGTCGTATCGATAAATTAA+TGG | 0.313006 | 8_3:-54508226 | Msa1295970:CDS |
| TTAGCGGCGGCTGGCGGTGG+AGG | 0.345735 | 8_3:+54508303 | None:intergenic |
| AGAATTTCATAGGTATTATC+TGG | 0.346349 | 8_3:-54504970 | Msa1295970:three_prime_UTR |
| TTAGCGGCGGCCGGCGGTGG+AGG | 0.347728 | 8_3:+54508093 | None:intergenic |
| GCGGCGGCCGGCGGTGGAGG+AGG | 0.356060 | 8_3:+54508096 | None:intergenic |
| GCGGCGGCTGGCGGTGGAGG+AGG | 0.358056 | 8_3:+54508306 | None:intergenic |
| TATCGATACGACTTTCGATT+TGG | 0.359518 | 8_3:+54508235 | None:intergenic |
| CTCACGAATAACTTCTTTGT+TGG | 0.363593 | 8_3:+54507801 | None:intergenic |
| GAATTAGCGGCGGCTGGCGG+TGG | 0.370125 | 8_3:+54508300 | None:intergenic |
| TTAATAGTCGAGAATTTCAT+AGG | 0.372343 | 8_3:-54504980 | Msa1295970:three_prime_UTR |
| GAATTAGCGGCGGCCGGCGG+TGG | 0.372608 | 8_3:+54508090 | None:intergenic |
| TATCGATACGACTTTCGATT+TGG | 0.375478 | 8_3:+54507845 | None:intergenic |
| CAGTTTGACAATGGTTCATT+CGG | 0.377337 | 8_3:-54508277 | Msa1295970:exon |
| AAAATCAACCATTGTCGAAC+TGG | 0.403034 | 8_3:+54508068 | None:intergenic |
| ACGAATACCTTGTTCATTGT+TGG | 0.403307 | 8_3:+54508194 | None:intergenic |
| CGAATGAACCATTGTCAAAC+TGG | 0.404357 | 8_3:+54508278 | None:intergenic |
| GCGGTGGAGGAGGGTTTGTA+AGG | 0.409449 | 8_3:+54508106 | None:intergenic |
| GCGGCCGGCCGTCGTGGATG+AGG | 0.417720 | 8_3:+54507919 | None:intergenic |
| AGTGAACAAACTCCTTCATT+TGG | 0.419970 | 8_3:+54505173 | None:intergenic |
| TACAGGCATATCCATCCAAC+AGG | 0.421570 | 8_3:-54507990 | Msa1295970:CDS |
| GGATTAAACAAACTATGTTC+TGG | 0.423889 | 8_3:+54507622 | None:intergenic |
| TGTCTCGACTATTAGATTGC+TGG | 0.436263 | 8_3:+54505574 | None:intergenic |
| TCCACACTAGTACTACAATT+AGG | 0.439291 | 8_3:+54505101 | None:intergenic |
| CGGCGGCTGGCGGTGGAGGA+GGG | 0.444108 | 8_3:+54508307 | None:intergenic |
| CGGCGGCCGGCGGTGGAGGA+GGG | 0.453878 | 8_3:+54508097 | None:intergenic |
| ACGAATAACTTCTTTGTTGG+TGG | 0.458657 | 8_3:+54507804 | None:intergenic |
| TAAAATGCAATAGGTTCTGA+TGG | 0.462667 | 8_3:-54505281 | Msa1295970:intron |
| TTGAGGACTTACTTCAAAGT+TGG | 0.462822 | 8_3:+54507239 | None:intergenic |
| ATAACTTCTTTGTTGGTGGT+TGG | 0.466863 | 8_3:+54507808 | None:intergenic |
| CGATCGTATCGATGAACTAC+AGG | 0.470708 | 8_3:-54508007 | Msa1295970:CDS |
| TGCAGATCTCTGCAATCATC+AGG | 0.472868 | 8_3:+54507511 | None:intergenic |
| CTACTACCTTTCAAAATAGC+TGG | 0.473726 | 8_3:+54505007 | None:intergenic |
| ATTGATACAGAATGACGAAA+TGG | 0.473840 | 8_3:+54507477 | None:intergenic |
| CAAAGAAGTTATTCGTGAGT+TGG | 0.479306 | 8_3:-54507797 | Msa1295970:CDS |
| ATTAGATTGCTGGCCATAGT+TGG | 0.482317 | 8_3:+54505584 | None:intergenic |
| TTAGCGGCGGCCGGCCGTCG+TGG | 0.485588 | 8_3:+54507913 | None:intergenic |
| CGCTAATTCCAGTTCGACAA+TGG | 0.485959 | 8_3:-54508076 | Msa1295970:CDS |
| TCGTGGCTTGAACGCAATCC+TGG | 0.486195 | 8_3:-54507448 | Msa1295970:CDS |
| GTAAAATATCTGCAACAAGC+TGG | 0.489711 | 8_3:-54504888 | Msa1295970:three_prime_UTR |
| GGAACACATTATTAGTGAGT+TGG | 0.493694 | 8_3:-54507968 | Msa1295970:CDS |
| AGGACTTACTTCAAAGTTGG+CGG | 0.494921 | 8_3:+54507242 | None:intergenic |
| TCAGACACCGGAAATGGAAA+GGG | 0.498482 | 8_3:-54505619 | Msa1295970:intron |
| AGAAGCATCGGATCACCATC+AGG | 0.500172 | 8_3:+54507580 | None:intergenic |
| CGGCCGGCCGTCGTGGATGA+GGG | 0.504990 | 8_3:+54507920 | None:intergenic |
| GGTTCTGATGGGTTTGCCGT+TGG | 0.507165 | 8_3:-54505269 | Msa1295970:CDS |
| AAACCCTCATCCACGACGGC+CGG | 0.508743 | 8_3:-54507923 | Msa1295970:CDS |
| TTCAGACACCGGAAATGGAA+AGG | 0.511032 | 8_3:-54505620 | Msa1295970:intron |
| TCTGTAACTATTAATAGCGA+TGG | 0.515541 | 8_3:+54508373 | None:intergenic |
| CGCTAATTCCAGTTTGACAA+TGG | 0.517721 | 8_3:-54508286 | Msa1295970:exon |
| GATGAAGATGCTAGAGCAAA+AGG | 0.518055 | 8_3:-54505238 | Msa1295970:CDS |
| AGGTGATGATGTTGTGATGC+TGG | 0.524320 | 8_3:-54505218 | Msa1295970:CDS |
| ACTAATAATGTGTTCCCTGT+TGG | 0.528420 | 8_3:+54507975 | None:intergenic |
| AAACTGGAATTAGCGGCGGC+TGG | 0.530827 | 8_3:+54508294 | None:intergenic |
| CATTGTCAAAATGGAATTAG+CGG | 0.532954 | 8_3:+54507897 | None:intergenic |
| ATACCTTGTTCATTGTTGGT+TGG | 0.548488 | 8_3:+54508198 | None:intergenic |
| ACAAGCTGGAATAGCTCAGT+TGG | 0.551188 | 8_3:-54504874 | Msa1295970:three_prime_UTR |
| TACAAACCCTCCTCCACCGC+CGG | 0.553250 | 8_3:-54508103 | Msa1295970:CDS |
| CATTGTCAAACTGGAATTAG+CGG | 0.554257 | 8_3:+54508287 | None:intergenic |
| AAAATGCAATAGGTTCTGAT+GGG | 0.560085 | 8_3:-54505280 | Msa1295970:intron |
| AAGTTATTCGTGAGTTGGAG+AGG | 0.561550 | 8_3:-54507792 | Msa1295970:CDS |
| CATTGTCGAACTGGAATTAG+CGG | 0.561644 | 8_3:+54508077 | None:intergenic |
| AAAATGGAATTAGCGGCGGC+CGG | 0.569456 | 8_3:+54507904 | None:intergenic |
| GCTCAGTTGGTTAGAGTGTG+TGG | 0.570996 | 8_3:-54504861 | Msa1295970:three_prime_UTR |
| GAACTGGAATTAGCGGCGGC+CGG | 0.573910 | 8_3:+54508084 | None:intergenic |
| GAGAGGTTAGAGCCAAATGA+AGG | 0.575617 | 8_3:-54505185 | Msa1295970:three_prime_UTR |
| CTGGAATTAGCGGCGGCCGG+CGG | 0.578842 | 8_3:+54508087 | None:intergenic |
| ATAGCTGGTAGTATTGAGAA+AGG | 0.584255 | 8_3:+54505022 | None:intergenic |
| AAGTCGTATCGATAAACTAA+AGG | 0.586014 | 8_3:-54507836 | Msa1295970:CDS |
| ACTATGTTCTGGAGAAGCAA+AGG | 0.588494 | 8_3:+54507633 | None:intergenic |
| ATAATGTGTTCCCTGTTGGA+TGG | 0.600001 | 8_3:+54507979 | None:intergenic |
| ACTTACTTCAAAGTTGGCGG+CGG | 0.600192 | 8_3:+54507245 | None:intergenic |
| TCCTAATTGTAGTACTAGTG+TGG | 0.603843 | 8_3:-54505102 | Msa1295970:three_prime_UTR |
| TCTTCATCATCATGCTCCAA+CGG | 0.617314 | 8_3:+54505253 | None:intergenic |
| TCGTATCGATAAACTAAAGG+AGG | 0.621892 | 8_3:-54507833 | Msa1295970:CDS |
| CTGGAATTAGCGGCGGCTGG+CGG | 0.623774 | 8_3:+54508297 | None:intergenic |
| TCTGTATCAATGCTAAGTCG+TGG | 0.641490 | 8_3:-54507465 | Msa1295970:CDS |
| TCTTTAGTAAGAAGAAGCAT+CGG | 0.641537 | 8_3:+54507568 | None:intergenic |
| ATTTCATAGGTATTATCTGG+AGG | 0.645100 | 8_3:-54504967 | Msa1295970:three_prime_UTR |
| GATCCAACCAACAATGAACA+AGG | 0.663048 | 8_3:-54508201 | Msa1295970:CDS |
| GCATCGGATCACCATCAGGA+AGG | 0.663524 | 8_3:+54507584 | None:intergenic |
| ACACTCAAATCATTAACACC+AGG | 0.670543 | 8_3:+54507430 | None:intergenic |
| TGTCAAACTGGAATTAGCGG+CGG | 0.685168 | 8_3:+54508290 | None:intergenic |
| TGTCGAACTGGAATTAGCGG+CGG | 0.685336 | 8_3:+54508080 | None:intergenic |
| ATGCTGGAGTAAAATGTGAG+AGG | 0.698079 | 8_3:-54505202 | Msa1295970:exon |
| TGTCAAAATGGAATTAGCGG+CGG | 0.703335 | 8_3:+54507900 | None:intergenic |
| TTACAAACCCTCATCCACGA+CGG | 0.727678 | 8_3:-54507927 | Msa1295970:CDS |
| ACAGGCATATCCATCCAACA+GGG | 0.752977 | 8_3:-54507989 | Msa1295970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTTAAGAATTTTAAATT+TGG | - | chr8_3:54506058-54506077 | Msa1295970:intron | 10.0% |
| !! | TAAAATTAGTTATATTACCT+TGG | - | chr8_3:54506082-54506101 | Msa1295970:intron | 15.0% |
| !! | AGATATTCAAATTTATTGTA+TGG | + | chr8_3:54506752-54506771 | None:intergenic | 15.0% |
| !!! | ATTAATTTGCATGTTTTTTC+AGG | - | chr8_3:54505970-54505989 | Msa1295970:intron | 20.0% |
| !!! | ATTTTAATTGTTCAGAGTTA+AGG | - | chr8_3:54507919-54507938 | Msa1295970:CDS | 20.0% |
| !! | AATTACCAAACATTATTCTT+TGG | + | chr8_3:54507955-54507974 | None:intergenic | 20.0% |
| !! | GTAATTGATTAAAATGCAAT+AGG | - | chr8_3:54507969-54507988 | Msa1295970:CDS | 20.0% |
| !!! | CTGATATTTTTATTATGACA+TGG | + | chr8_3:54508203-54508222 | None:intergenic | 20.0% |
| !! | AAGTCGTATCGATAAATTAA+TGG | - | chr8_3:54505033-54505052 | Msa1295970:three_prime_UTR | 25.0% |
| !! | TTTCTCAATCATCTTTTCAA+AGG | + | chr8_3:54505572-54505591 | None:intergenic | 25.0% |
| ! | TCTTCTTACTAAAGATGATT+TGG | - | chr8_3:54505699-54505718 | Msa1295970:intron | 25.0% |
| !! | TGGATATACTATTTTCAATG+AGG | - | chr8_3:54505942-54505961 | Msa1295970:intron | 25.0% |
| ! | AGTTATATTACCTTGGTTAT+TGG | - | chr8_3:54506089-54506108 | Msa1295970:intron | 25.0% |
| ! | AATGTAAACAGATGAATATC+CGG | - | chr8_3:54506226-54506245 | Msa1295970:intron | 25.0% |
| ! | TTTGCTGCTAATTTACTATT+TGG | - | chr8_3:54506381-54506400 | Msa1295970:intron | 25.0% |
| ! | TTGCTGCTAATTTACTATTT+GGG | - | chr8_3:54506382-54506401 | Msa1295970:intron | 25.0% |
| ! | TTGGATTCTCTTTATTAATG+TGG | - | chr8_3:54506809-54506828 | Msa1295970:intron | 25.0% |
| ! | TGGATTCTCTTTATTAATGT+GGG | - | chr8_3:54506810-54506829 | Msa1295970:intron | 25.0% |
| ! | AACAGGGAATAAGAATTATA+GGG | - | chr8_3:54506869-54506888 | Msa1295970:intron | 25.0% |
| ! | AATTGTCAACTAGAGTTTAT+AGG | - | chr8_3:54506913-54506932 | Msa1295970:intron | 25.0% |
| ! | ACATGGAAAACAGAAATAAA+AGG | + | chr8_3:54506956-54506975 | None:intergenic | 25.0% |
| ! | AAACACAAATAAAGAGAACA+AGG | + | chr8_3:54507046-54507065 | None:intergenic | 25.0% |
| !! | TTGTTCTCTTTATTTGTGTT+TGG | - | chr8_3:54507045-54507064 | Msa1295970:intron | 25.0% |
| ! | TATCAATCAAAAACATGTCT+GGG | + | chr8_3:54507132-54507151 | None:intergenic | 25.0% |
| !!! | ACATGTTTTTGATTGATACT+TGG | - | chr8_3:54507134-54507153 | Msa1295970:intron | 25.0% |
| !! | ATACTTGGACTAAATTTTGA+GGG | - | chr8_3:54507149-54507168 | Msa1295970:intron | 25.0% |
| ! | ACATAACAGAATGCAATTAA+AGG | + | chr8_3:54507185-54507204 | None:intergenic | 25.0% |
| ! | TAAGTCATTTACATTGTTGT+GGG | - | chr8_3:54507307-54507326 | Msa1295970:intron | 25.0% |
| ! | CAAAACCAAAGAATAATGTT+TGG | - | chr8_3:54507947-54507966 | Msa1295970:CDS | 25.0% |
| ! | TTAATAGTCGAGAATTTCAT+AGG | - | chr8_3:54508279-54508298 | Msa1295970:exon | 25.0% |
| ! | AGAATTTCATAGGTATTATC+TGG | - | chr8_3:54508289-54508308 | Msa1295970:exon | 25.0% |
| !!! | GAAAACTTTTGGTTTGATGT+AGG | + | chr8_3:54504867-54504886 | None:intergenic | 30.0% |
| ! | TAATAGCGATGGAAAACTTT+TGG | + | chr8_3:54504878-54504897 | None:intergenic | 30.0% |
| TCTGTAACTATTAATAGCGA+TGG | + | chr8_3:54504889-54504908 | None:intergenic | 30.0% | |
| CATTGTCAAAATGGAATTAG+CGG | + | chr8_3:54505365-54505384 | None:intergenic | 30.0% | |
| !! | CATTTTGACAATGGTTGATT+CGG | - | chr8_3:54505372-54505391 | Msa1295970:intron | 30.0% |
| ! | AAGTCGTATCGATAAACTAA+AGG | - | chr8_3:54505423-54505442 | Msa1295970:intron | 30.0% |
| GGATTAAACAAACTATGTTC+TGG | + | chr8_3:54505640-54505659 | None:intergenic | 30.0% | |
| ! | TCTTTAGTAAGAAGAAGCAT+CGG | + | chr8_3:54505694-54505713 | None:intergenic | 30.0% |
| ATTGATACAGAATGACGAAA+TGG | + | chr8_3:54505785-54505804 | None:intergenic | 30.0% | |
| !!! | AATTTGCATGTTTTTTCAGG+AGG | - | chr8_3:54505973-54505992 | Msa1295970:intron | 30.0% |
| AAGTAAGTCCTCAATTAGTT+TGG | - | chr8_3:54506029-54506048 | Msa1295970:intron | 30.0% | |
| TTGGTTATTGGTACTGTTAT+GGG | - | chr8_3:54506101-54506120 | Msa1295970:intron | 30.0% | |
| TAAATTGCAACTGTGTGAAT+CGG | + | chr8_3:54506145-54506164 | None:intergenic | 30.0% | |
| ! | TTTTGTTCTATAAGGATGTG+AGG | + | chr8_3:54506301-54506320 | None:intergenic | 30.0% |
| !! | GTGATGTGTTTTGTTCTATA+AGG | + | chr8_3:54506309-54506328 | None:intergenic | 30.0% |
| CATTGGTCAAAATAGAATCT+GGG | + | chr8_3:54506427-54506446 | None:intergenic | 30.0% | |
| TCATTGGTCAAAATAGAATC+TGG | + | chr8_3:54506428-54506447 | None:intergenic | 30.0% | |
| ! | GCTAATTGCTATTGTTGATT+TGG | - | chr8_3:54506790-54506809 | Msa1295970:intron | 30.0% |
| TGTATCTTGTGAGTTTAGTT+AGG | - | chr8_3:54506836-54506855 | Msa1295970:intron | 30.0% | |
| CAACAGGGAATAAGAATTAT+AGG | - | chr8_3:54506868-54506887 | Msa1295970:intron | 30.0% | |
| ! | TTTGGTTGATATATGACATG+AGG | - | chr8_3:54507063-54507082 | Msa1295970:intron | 30.0% |
| ! | TTGGTTGATATATGACATGA+GGG | - | chr8_3:54507064-54507083 | Msa1295970:intron | 30.0% |
| ATCAATCAAAAACATGTCTG+GGG | + | chr8_3:54507131-54507150 | None:intergenic | 30.0% | |
| GTATCAATCAAAAACATGTC+TGG | + | chr8_3:54507133-54507152 | None:intergenic | 30.0% | |
| ! | GATACTTGGACTAAATTTTG+AGG | - | chr8_3:54507148-54507167 | Msa1295970:intron | 30.0% |
| !! | CTAAATTTTGAGGGAGAAAA+TGG | - | chr8_3:54507158-54507177 | Msa1295970:intron | 30.0% |
| GCATTCTGTTATGTTTATTG+AGG | - | chr8_3:54507191-54507210 | Msa1295970:intron | 30.0% | |
| TTGGATAGCTTGATAAAAGA+GGG | - | chr8_3:54507224-54507243 | Msa1295970:intron | 30.0% | |
| CTAAGTCATTTACATTGTTG+TGG | - | chr8_3:54507306-54507325 | Msa1295970:intron | 30.0% | |
| ! | AGTTTAGAATATGCACTGTT+TGG | - | chr8_3:54507358-54507377 | Msa1295970:intron | 30.0% |
| ACAACAAGAAAAACTCTGTA+AGG | - | chr8_3:54507727-54507746 | Msa1295970:CDS | 30.0% | |
| !!! | TCTTCTTCTTTTGAAGTCAA+TGG | - | chr8_3:54507767-54507786 | Msa1295970:CDS | 30.0% |
| ! | TAAAATGCAATAGGTTCTGA+TGG | - | chr8_3:54507978-54507997 | Msa1295970:CDS | 30.0% |
| ! | AAAATGCAATAGGTTCTGAT+GGG | - | chr8_3:54507979-54507998 | Msa1295970:CDS | 30.0% |
| !! | ATACTACCAGCTATTTTGAA+AGG | - | chr8_3:54508246-54508265 | Msa1295970:CDS | 30.0% |
| ATTTCATAGGTATTATCTGG+AGG | - | chr8_3:54508292-54508311 | Msa1295970:five_prime_UTR | 30.0% | |
| !!! | GTTGTGTGGTTCTTTTTTCT+GGG | + | chr8_3:54504917-54504936 | None:intergenic | 35.0% |
| !!! | TGTTGTGTGGTTCTTTTTTC+TGG | + | chr8_3:54504918-54504937 | None:intergenic | 35.0% |
| CATTGTCAAACTGGAATTAG+CGG | + | chr8_3:54504975-54504994 | None:intergenic | 35.0% | |
| CAGTTTGACAATGGTTCATT+CGG | - | chr8_3:54504982-54505001 | Msa1295970:three_prime_UTR | 35.0% | |
| TATCGATACGACTTTCGATT+TGG | + | chr8_3:54505027-54505046 | None:intergenic | 35.0% | |
| ATACCTTGTTCATTGTTGGT+TGG | + | chr8_3:54505064-54505083 | None:intergenic | 35.0% | |
| ACGAATACCTTGTTCATTGT+TGG | + | chr8_3:54505068-54505087 | None:intergenic | 35.0% | |
| AAAATCAACCATTGTCGAAC+TGG | + | chr8_3:54505194-54505213 | None:intergenic | 35.0% | |
| ACTAATAATGTGTTCCCTGT+TGG | + | chr8_3:54505287-54505306 | None:intergenic | 35.0% | |
| GGAACACATTATTAGTGAGT+TGG | - | chr8_3:54505291-54505310 | Msa1295970:intron | 35.0% | |
| !! | CGCTAATTCCATTTTGACAA+TGG | - | chr8_3:54505363-54505382 | Msa1295970:intron | 35.0% |
| CGAATCAACCATTGTCAAAA+TGG | + | chr8_3:54505374-54505393 | None:intergenic | 35.0% | |
| TATCGATACGACTTTCGATT+TGG | + | chr8_3:54505027-54505046 | None:intergenic | 35.0% | |
| ! | TCGTATCGATAAACTAAAGG+AGG | - | chr8_3:54505426-54505445 | Msa1295970:intron | 35.0% |
| !! | ATAACTTCTTTGTTGGTGGT+TGG | + | chr8_3:54505454-54505473 | None:intergenic | 35.0% |
| ACGAATAACTTCTTTGTTGG+TGG | + | chr8_3:54505458-54505477 | None:intergenic | 35.0% | |
| CTCACGAATAACTTCTTTGT+TGG | + | chr8_3:54505461-54505480 | None:intergenic | 35.0% | |
| CAAAGAAGTTATTCGTGAGT+TGG | - | chr8_3:54505462-54505481 | Msa1295970:intron | 35.0% | |
| ! | GGAAGGATAAAAAGCATATC+TGG | + | chr8_3:54505661-54505680 | None:intergenic | 35.0% |
| !! | ATGCTTTTTATCCTTCCTGA+TGG | - | chr8_3:54505664-54505683 | Msa1295970:intron | 35.0% |
| ACACTCAAATCATTAACACC+AGG | + | chr8_3:54505832-54505851 | None:intergenic | 35.0% | |
| TAGTATATCCAATCCAGCAA+AGG | + | chr8_3:54505933-54505952 | None:intergenic | 35.0% | |
| TTGAGGACTTACTTCAAAGT+TGG | + | chr8_3:54506023-54506042 | None:intergenic | 35.0% | |
| !! | TCCTCAATTAGTTTGGTGTT+TGG | - | chr8_3:54506036-54506055 | Msa1295970:intron | 35.0% |
| ACCAAACACCAAACTAATTG+AGG | + | chr8_3:54506040-54506059 | None:intergenic | 35.0% | |
| CATAACAGTACCAATAACCA+AGG | + | chr8_3:54506102-54506121 | None:intergenic | 35.0% | |
| CTTGGTTATTGGTACTGTTA+TGG | - | chr8_3:54506100-54506119 | Msa1295970:intron | 35.0% | |
| AAATTGCAACTGTGTGAATC+GGG | + | chr8_3:54506144-54506163 | None:intergenic | 35.0% | |
| TTCACACAGTTGCAATTTAC+AGG | - | chr8_3:54506146-54506165 | Msa1295970:intron | 35.0% | |
| TCACACAGTTGCAATTTACA+GGG | - | chr8_3:54506147-54506166 | Msa1295970:intron | 35.0% | |
| GGGAAAAAATAGATCGACAA+TGG | - | chr8_3:54506167-54506186 | Msa1295970:intron | 35.0% | |
| AAATAGAATCTGGGCCATAA+AGG | + | chr8_3:54506418-54506437 | None:intergenic | 35.0% | |
| AACAGACACATTAGAGCTAA+TGG | - | chr8_3:54506545-54506564 | Msa1295970:intron | 35.0% | |
| ACAGACACATTAGAGCTAAT+GGG | - | chr8_3:54506546-54506565 | Msa1295970:intron | 35.0% | |
| ! | GATTTGACTTTCGTGAGAAA+AGG | + | chr8_3:54506616-54506635 | None:intergenic | 35.0% |
| GTCAAATCTGTAGTTGAGTA+AGG | - | chr8_3:54506628-54506647 | Msa1295970:intron | 35.0% | |
| AGTTAGGACTTCAAAACAAC+AGG | - | chr8_3:54506852-54506871 | Msa1295970:intron | 35.0% | |
| GTTAGGACTTCAAAACAACA+GGG | - | chr8_3:54506853-54506872 | Msa1295970:intron | 35.0% | |
| ! | TTCTGTTTTCCATGTTGAAG+AGG | - | chr8_3:54506961-54506980 | Msa1295970:intron | 35.0% |
| ! | TCTGTTTTCCATGTTGAAGA+GGG | - | chr8_3:54506962-54506981 | Msa1295970:intron | 35.0% |
| TTGATATATGACATGAGGGA+TGG | - | chr8_3:54507068-54507087 | Msa1295970:intron | 35.0% | |
| TGATATATGACATGAGGGAT+GGG | - | chr8_3:54507069-54507088 | Msa1295970:intron | 35.0% | |
| ATGTTTATTGAGGCGTAAAG+TGG | - | chr8_3:54507201-54507220 | Msa1295970:intron | 35.0% | |
| GTTGGATAGCTTGATAAAAG+AGG | - | chr8_3:54507223-54507242 | Msa1295970:intron | 35.0% | |
| ATAGCTTGATAAAAGAGGGT+TGG | - | chr8_3:54507228-54507247 | Msa1295970:intron | 35.0% | |
| CATGTAATGCACTAATGTGT+TGG | - | chr8_3:54507384-54507403 | Msa1295970:intron | 35.0% | |
| ! | TAATGCACTAATGTGTTGGT+AGG | - | chr8_3:54507388-54507407 | Msa1295970:intron | 35.0% |
| !!! | TTGCATGTTTTTTCAGACAC+CGG | - | chr8_3:54507628-54507647 | Msa1295970:CDS | 35.0% |
| ! | AGTTTTTCCCTTTCCATTTC+CGG | + | chr8_3:54507650-54507669 | None:intergenic | 35.0% |
| TATACATATGTTAGCCCACA+TGG | - | chr8_3:54507835-54507854 | Msa1295970:CDS | 35.0% | |
| AGTGAACAAACTCCTTCATT+TGG | + | chr8_3:54508089-54508108 | None:intergenic | 35.0% | |
| !!! | GCTGTTTTGAGTTCAAAGTT+GGG | + | chr8_3:54508128-54508147 | None:intergenic | 35.0% |
| !!! | AGCTGTTTTGAGTTCAAAGT+TGG | + | chr8_3:54508129-54508148 | None:intergenic | 35.0% |
| TCCTAATTGTAGTACTAGTG+TGG | - | chr8_3:54508157-54508176 | Msa1295970:CDS | 35.0% | |
| TCCACACTAGTACTACAATT+AGG | + | chr8_3:54508161-54508180 | None:intergenic | 35.0% | |
| ! | ATAGCTGGTAGTATTGAGAA+AGG | + | chr8_3:54508240-54508259 | None:intergenic | 35.0% |
| CTACTACCTTTCAAAATAGC+TGG | + | chr8_3:54508255-54508274 | None:intergenic | 35.0% | |
| GTAAAATATCTGCAACAAGC+TGG | - | chr8_3:54508371-54508390 | Msa1295970:five_prime_UTR | 35.0% | |
| TTGTAAATCTGCGTGTTGTG+TGG | + | chr8_3:54504931-54504950 | None:intergenic | 40.0% | |
| CGCTAATTCCAGTTTGACAA+TGG | - | chr8_3:54504973-54504992 | Msa1295970:three_prime_UTR | 40.0% | |
| CGAATGAACCATTGTCAAAC+TGG | + | chr8_3:54504984-54505003 | None:intergenic | 40.0% | |
| !! | ACGACTTTCGATTTGGAGTA+TGG | + | chr8_3:54505020-54505039 | None:intergenic | 40.0% |
| GATCCAACCAACAATGAACA+AGG | - | chr8_3:54505058-54505077 | Msa1295970:three_prime_UTR | 40.0% | |
| CATTGTCGAACTGGAATTAG+CGG | + | chr8_3:54505185-54505204 | None:intergenic | 40.0% | |
| ATAATGTGTTCCCTGTTGGA+TGG | + | chr8_3:54505283-54505302 | None:intergenic | 40.0% | |
| TGTCAAAATGGAATTAGCGG+CGG | + | chr8_3:54505362-54505381 | None:intergenic | 40.0% | |
| !! | ACGACTTTCGATTTGGAGTA+TGG | + | chr8_3:54505020-54505039 | None:intergenic | 40.0% |
| ! | AAGTTATTCGTGAGTTGGAG+AGG | - | chr8_3:54505467-54505486 | Msa1295970:intron | 40.0% |
| !! | ACTATGTTCTGGAGAAGCAA+AGG | + | chr8_3:54505629-54505648 | None:intergenic | 40.0% |
| TCTGTATCAATGCTAAGTCG+TGG | - | chr8_3:54505794-54505813 | Msa1295970:intron | 40.0% | |
| !!! | TTTTGTTGCTTTGCCTTTGC+TGG | - | chr8_3:54505917-54505936 | Msa1295970:intron | 40.0% |
| AGGACTTACTTCAAAGTTGG+CGG | + | chr8_3:54506020-54506039 | None:intergenic | 40.0% | |
| TTATTGGTACTGTTATGGGC+TGG | - | chr8_3:54506105-54506124 | Msa1295970:intron | 40.0% | |
| TAAGGATGTGAGGAAAGAGT+GGG | + | chr8_3:54506291-54506310 | None:intergenic | 40.0% | |
| ATAAGGATGTGAGGAAAGAG+TGG | + | chr8_3:54506292-54506311 | None:intergenic | 40.0% | |
| TTCTGTCCAAACCCATTATG+TGG | + | chr8_3:54506359-54506378 | None:intergenic | 40.0% | |
| TTTGAGTGAGGGAGAATCAT+TGG | + | chr8_3:54506444-54506463 | None:intergenic | 40.0% | |
| CAGGTAATGACATGTAGGTA+GGG | + | chr8_3:54506488-54506507 | None:intergenic | 40.0% | |
| ACAGGTAATGACATGTAGGT+AGG | + | chr8_3:54506489-54506508 | None:intergenic | 40.0% | |
| CTACACAGGTAATGACATGT+AGG | + | chr8_3:54506493-54506512 | None:intergenic | 40.0% | |
| CTACATGTCATTACCTGTGT+AGG | - | chr8_3:54506491-54506510 | Msa1295970:intron | 40.0% | |
| ! | ATGTGTCTGTTTCTCAAACC+TGG | + | chr8_3:54506536-54506555 | None:intergenic | 40.0% |
| TTGACTTTCGTGAGAAAAGG+AGG | + | chr8_3:54506613-54506632 | None:intergenic | 40.0% | |
| TCTGTAGTTGAGTAAGGTGT+TGG | - | chr8_3:54506634-54506653 | Msa1295970:intron | 40.0% | |
| TTTCCCTTGTTGGAGAAAGA+GGG | + | chr8_3:54506691-54506710 | None:intergenic | 40.0% | |
| ATTTCCCTTGTTGGAGAAAG+AGG | + | chr8_3:54506692-54506711 | None:intergenic | 40.0% | |
| ! | CTGTTTTCCATGTTGAAGAG+GGG | - | chr8_3:54506963-54506982 | Msa1295970:intron | 40.0% |
| CATCGACAAAATAACAGCTC+AGG | + | chr8_3:54507010-54507029 | None:intergenic | 40.0% | |
| TTATTGAGGCGTAAAGTGGT+TGG | - | chr8_3:54507205-54507224 | Msa1295970:intron | 40.0% | |
| !! | GGTGTCATTAAACATGCTAG+CGG | - | chr8_3:54507409-54507428 | Msa1295970:CDS | 40.0% |
| ! | GTGTCATTAAACATGCTAGC+GGG | - | chr8_3:54507410-54507429 | Msa1295970:CDS | 40.0% |
| GGAATGTTGTCTCGTTGTAT+TGG | - | chr8_3:54507450-54507469 | Msa1295970:CDS | 40.0% | |
| !!! | GTTTTTTCAGACACCGGAAA+TGG | - | chr8_3:54507634-54507653 | Msa1295970:CDS | 40.0% |
| GAAAAACTCTCTGCCAACTA+TGG | - | chr8_3:54507662-54507681 | Msa1295970:CDS | 40.0% | |
| ATTAGATTGCTGGCCATAGT+TGG | + | chr8_3:54507678-54507697 | None:intergenic | 40.0% | |
| TGTCTCGACTATTAGATTGC+TGG | + | chr8_3:54507688-54507707 | None:intergenic | 40.0% | |
| TCTTCATCATCATGCTCCAA+CGG | + | chr8_3:54508009-54508028 | None:intergenic | 40.0% | |
| GATGAAGATGCTAGAGCAAA+AGG | - | chr8_3:54508021-54508040 | Msa1295970:CDS | 40.0% | |
| ATGCTGGAGTAAAATGTGAG+AGG | - | chr8_3:54508057-54508076 | Msa1295970:CDS | 40.0% | |
| TGTCAAACTGGAATTAGCGG+CGG | + | chr8_3:54504972-54504991 | None:intergenic | 45.0% | |
| ! | AGGGTTTGTAAGGTTTTGCG+TGG | + | chr8_3:54505146-54505165 | None:intergenic | 45.0% |
| CGCTAATTCCAGTTCGACAA+TGG | - | chr8_3:54505183-54505202 | Msa1295970:three_prime_UTR | 45.0% | |
| ! | CGATCGTATCGATGAACTAC+AGG | - | chr8_3:54505252-54505271 | Msa1295970:CDS | 45.0% |
| TACAGGCATATCCATCCAAC+AGG | - | chr8_3:54505269-54505288 | Msa1295970:CDS | 45.0% | |
| ACAGGCATATCCATCCAACA+GGG | - | chr8_3:54505270-54505289 | Msa1295970:CDS | 45.0% | |
| TTACAAACCCTCATCCACGA+CGG | - | chr8_3:54505332-54505351 | Msa1295970:intron | 45.0% | |
| TGCAGATCTCTGCAATCATC+AGG | + | chr8_3:54505751-54505770 | None:intergenic | 45.0% | |
| TTGCTTTGCCTTTGCTGGAT+TGG | - | chr8_3:54505922-54505941 | Msa1295970:intron | 45.0% | |
| ACTTACTTCAAAGTTGGCGG+CGG | + | chr8_3:54506017-54506036 | None:intergenic | 45.0% | |
| TCCAAACCCATTATGTGGCA+GGG | + | chr8_3:54506354-54506373 | None:intergenic | 45.0% | |
| TGGGCCATAAAGGAGAATCT+GGG | + | chr8_3:54506408-54506427 | None:intergenic | 45.0% | |
| ATTCTCCCTCACTCAAACCA+TGG | - | chr8_3:54506447-54506466 | Msa1295970:intron | 45.0% | |
| AACCATGGCACTCAATCCAA+TGG | - | chr8_3:54506462-54506481 | Msa1295970:intron | 45.0% | |
| CATGTCATTACCTGTGTAGG+TGG | - | chr8_3:54506494-54506513 | Msa1295970:intron | 45.0% | |
| AAGACTAATGCCACCTACAC+AGG | + | chr8_3:54506507-54506526 | None:intergenic | 45.0% | |
| AATTCGCACGTTGATGTGTC+TGG | + | chr8_3:54506572-54506591 | None:intergenic | 45.0% | |
| TCGTGAGAAAAGGAGGACAA+GGG | + | chr8_3:54506606-54506625 | None:intergenic | 45.0% | |
| TTCGTGAGAAAAGGAGGACA+AGG | + | chr8_3:54506607-54506626 | None:intergenic | 45.0% | |
| TTCCCTTGTTGGAGAAAGAG+GGG | + | chr8_3:54506690-54506709 | None:intergenic | 45.0% | |
| CGTCGAAACATTTCCCTTGT+TGG | + | chr8_3:54506701-54506720 | None:intergenic | 45.0% | |
| GAAATGTTTCGACGTTCTCG+CGG | - | chr8_3:54506707-54506726 | Msa1295970:intron | 45.0% | |
| AAATGTTTCGACGTTCTCGC+GGG | - | chr8_3:54506708-54506727 | Msa1295970:intron | 45.0% | |
| !!! | CTGGGGACGATTTTGATTCA+TGG | + | chr8_3:54507114-54507133 | None:intergenic | 45.0% |
| CGGGTTCATGTTCTAGCATT+TGG | - | chr8_3:54507429-54507448 | Msa1295970:CDS | 45.0% | |
| !! | GTACAAAAGTGTCCTAGCCA+CGG | + | chr8_3:54507490-54507509 | None:intergenic | 45.0% |
| TTCAGACACCGGAAATGGAA+AGG | - | chr8_3:54507639-54507658 | Msa1295970:CDS | 45.0% | |
| TCAGACACCGGAAATGGAAA+GGG | - | chr8_3:54507640-54507659 | Msa1295970:CDS | 45.0% | |
| ACAAGCACATGCATCCATGT+GGG | + | chr8_3:54507852-54507871 | None:intergenic | 45.0% | |
| AACAAGCACATGCATCCATG+TGG | + | chr8_3:54507853-54507872 | None:intergenic | 45.0% | |
| ACATGGATGCATGTGCTTGT+TGG | - | chr8_3:54507852-54507871 | Msa1295970:CDS | 45.0% | |
| !! | GCTTGTTGGCTAGTCTTACA+AGG | - | chr8_3:54507866-54507885 | Msa1295970:CDS | 45.0% |
| ! | AGGTGATGATGTTGTGATGC+TGG | - | chr8_3:54508041-54508060 | Msa1295970:CDS | 45.0% |
| GAGAGGTTAGAGCCAAATGA+AGG | - | chr8_3:54508074-54508093 | Msa1295970:CDS | 45.0% | |
| ACAAGCTGGAATAGCTCAGT+TGG | - | chr8_3:54508385-54508404 | Msa1295970:five_prime_UTR | 45.0% | |
| TGTCGAACTGGAATTAGCGG+CGG | + | chr8_3:54505182-54505201 | None:intergenic | 50.0% | |
| AAAATGGAATTAGCGGCGGC+CGG | + | chr8_3:54505358-54505377 | None:intergenic | 50.0% | |
| !! | AGAAGCATCGGATCACCATC+AGG | + | chr8_3:54505682-54505701 | None:intergenic | 50.0% |
| !! | GTTATGGGCTGGTGTGTGTT+AGG | - | chr8_3:54506116-54506135 | Msa1295970:intron | 50.0% |
| CTGTAGGAGCTTTGCTCTGT+GGG | + | chr8_3:54506254-54506273 | None:intergenic | 50.0% | |
| ACTGTAGGAGCTTTGCTCTG+TGG | + | chr8_3:54506255-54506274 | None:intergenic | 50.0% | |
| ACAGAGCAAAGCTCCTACAG+TGG | - | chr8_3:54506254-54506273 | Msa1295970:intron | 50.0% | |
| GATGTGAGGAAAGAGTGGGA+GGG | + | chr8_3:54506287-54506306 | None:intergenic | 50.0% | |
| CATTATGTGGCAGGGAGTGA+GGG | + | chr8_3:54506346-54506365 | None:intergenic | 50.0% | |
| CTCACTCCCTGCCACATAAT+GGG | - | chr8_3:54506345-54506364 | Msa1295970:intron | 50.0% | |
| !! | TCCCTGCCACATAATGGGTT+TGG | - | chr8_3:54506350-54506369 | Msa1295970:intron | 50.0% |
| GTCCAAACCCATTATGTGGC+AGG | + | chr8_3:54506355-54506374 | None:intergenic | 50.0% | |
| TGGGCCCAGATTCTCCTTTA+TGG | - | chr8_3:54506401-54506420 | Msa1295970:intron | 50.0% | |
| CTGGGCCATAAAGGAGAATC+TGG | + | chr8_3:54506409-54506428 | None:intergenic | 50.0% | |
| GAGTGCCATGGTTTGAGTGA+GGG | + | chr8_3:54506455-54506474 | None:intergenic | 50.0% | |
| TGAGTGCCATGGTTTGAGTG+AGG | + | chr8_3:54506456-54506475 | None:intergenic | 50.0% | |
| TGACATGTAGGTAGGGCCAT+TGG | + | chr8_3:54506481-54506500 | None:intergenic | 50.0% | |
| !! | GGCATTAGTCTTCGTACTCC+AGG | - | chr8_3:54506515-54506534 | Msa1295970:intron | 50.0% |
| AGGAGGACAAGGGGCAAATT+TGG | + | chr8_3:54506596-54506615 | None:intergenic | 50.0% | |
| CGTGAGAAAAGGAGGACAAG+GGG | + | chr8_3:54506605-54506624 | None:intergenic | 50.0% | |
| TGGAGCATGGGTATTTGGCA+CGG | + | chr8_3:54506665-54506684 | None:intergenic | 50.0% | |
| TTGTTGGAGAAAGAGGGGAG+TGG | + | chr8_3:54506685-54506704 | None:intergenic | 50.0% | |
| ACTCCCCTCTTTCTCCAACA+AGG | - | chr8_3:54506684-54506703 | Msa1295970:intron | 50.0% | |
| CTCCCCTCTTTCTCCAACAA+GGG | - | chr8_3:54506685-54506704 | Msa1295970:intron | 50.0% | |
| CTGCAATCCCCTCTTCAACA+TGG | + | chr8_3:54506973-54506992 | None:intergenic | 50.0% | |
| TGGAAGAAATCTTGCGTCCG+TGG | - | chr8_3:54507470-54507489 | Msa1295970:CDS | 50.0% | |
| GCTCAGTTGGTTAGAGTGTG+TGG | - | chr8_3:54508398-54508417 | Msa1295970:five_prime_UTR | 50.0% | |
| AAACTGGAATTAGCGGCGGC+TGG | + | chr8_3:54504968-54504987 | None:intergenic | 55.0% | |
| GCATCGGATCACCATCAGGA+AGG | + | chr8_3:54505678-54505697 | None:intergenic | 55.0% | |
| TCGTGGCTTGAACGCAATCC+TGG | - | chr8_3:54505811-54505830 | Msa1295970:intron | 55.0% | |
| GGATGTGAGGAAAGAGTGGG+AGG | + | chr8_3:54506288-54506307 | None:intergenic | 55.0% | |
| CCATTATGTGGCAGGGAGTG+AGG | + | chr8_3:54506347-54506366 | None:intergenic | 55.0% | |
| CCTCACTCCCTGCCACATAA+TGG | - | chr8_3:54506344-54506363 | Msa1295970:intron | 55.0% | |
| GGCCATTGGATTGAGTGCCA+TGG | + | chr8_3:54506467-54506486 | None:intergenic | 55.0% | |
| GCATGGGTATTTGGCACGGT+GGG | + | chr8_3:54506661-54506680 | None:intergenic | 55.0% | |
| AGCATGGGTATTTGGCACGG+TGG | + | chr8_3:54506662-54506681 | None:intergenic | 55.0% | |
| GGGAGTGGAGCATGGGTATT+TGG | + | chr8_3:54506670-54506689 | None:intergenic | 55.0% | |
| GAAAGAGGGGAGTGGAGCAT+GGG | + | chr8_3:54506677-54506696 | None:intergenic | 55.0% | |
| AGAAAGAGGGGAGTGGAGCA+TGG | + | chr8_3:54506678-54506697 | None:intergenic | 55.0% | |
| GAAATCTTGCGTCCGTGGCT+AGG | - | chr8_3:54507475-54507494 | Msa1295970:CDS | 55.0% | |
| !! | GGTTCTGATGGGTTTGCCGT+TGG | - | chr8_3:54507990-54508009 | Msa1295970:CDS | 55.0% |
| GCGGTGGAGGAGGGTTTGTA+AGG | + | chr8_3:54504946-54504965 | None:intergenic | 60.0% | |
| TACAAACCCTCCTCCACCGC+CGG | - | chr8_3:54504946-54504965 | Msa1295970:three_prime_UTR | 60.0% | |
| GAACTGGAATTAGCGGCGGC+CGG | + | chr8_3:54505178-54505197 | None:intergenic | 60.0% | |
| AAACCCTCATCCACGACGGC+CGG | - | chr8_3:54505336-54505355 | Msa1295970:intron | 60.0% | |
| GAGCTTTGCTCTGTGGGCAC+CGG | + | chr8_3:54506248-54506267 | None:intergenic | 60.0% | |
| !! | GGAGGGTGTCTTGCCACTGT+AGG | + | chr8_3:54506270-54506289 | None:intergenic | 60.0% |
| ! | GCAGGGAGTGAGGGAGCATA+TGG | + | chr8_3:54506337-54506356 | None:intergenic | 60.0% |
| CTGGAATTAGCGGCGGCTGG+CGG | + | chr8_3:54504965-54504984 | None:intergenic | 65.0% | |
| GAATTAGCGGCGGCTGGCGG+TGG | + | chr8_3:54504962-54504981 | None:intergenic | 70.0% | |
| CTGGAATTAGCGGCGGCCGG+CGG | + | chr8_3:54505175-54505194 | None:intergenic | 70.0% | |
| TTAGCGGCGGCTGGCGGTGG+AGG | + | chr8_3:54504959-54504978 | None:intergenic | 75.0% | |
| GAATTAGCGGCGGCCGGCGG+TGG | + | chr8_3:54505172-54505191 | None:intergenic | 75.0% | |
| CGGCCGGCCGTCGTGGATGA+GGG | + | chr8_3:54505342-54505361 | None:intergenic | 75.0% | |
| ! | CGGCGGCTGGCGGTGGAGGA+GGG | + | chr8_3:54504955-54504974 | None:intergenic | 80.0% |
| ! | TTAGCGGCGGCCGGCGGTGG+AGG | + | chr8_3:54505169-54505188 | None:intergenic | 80.0% |
| ! | GCGGCCGGCCGTCGTGGATG+AGG | + | chr8_3:54505343-54505362 | None:intergenic | 80.0% |
| ! | TTAGCGGCGGCCGGCCGTCG+TGG | + | chr8_3:54505349-54505368 | None:intergenic | 80.0% |
| ! | GCGGCGGCTGGCGGTGGAGG+AGG | + | chr8_3:54504956-54504975 | None:intergenic | 85.0% |
| ! | CGGCGGCCGGCGGTGGAGGA+GGG | + | chr8_3:54505165-54505184 | None:intergenic | 85.0% |
| ! | GCGGCGGCCGGCGGTGGAGG+AGG | + | chr8_3:54505166-54505185 | None:intergenic | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 54504859 | 54508422 | 54504859 | ID=Msa1295970;Name=Msa1295970 |
| chr8_3 | mRNA | 54504859 | 54508422 | 54504859 | ID=Msa1295970-mRNA-1;Parent=Msa1295970;Name=Msa1295970-mRNA-1;_AED=0.02;_eAED=0.02;_QI=113|0.75|0.8|1|0.75|0.6|5|354|374 |
| chr8_3 | exon | 54504859 | 54505290 | 54504859 | ID=Msa1295970-mRNA-1:exon:15684;Parent=Msa1295970-mRNA-1 |
| chr8_3 | exon | 54505527 | 54505637 | 54505527 | ID=Msa1295970-mRNA-1:exon:15683;Parent=Msa1295970-mRNA-1 |
| chr8_3 | exon | 54507251 | 54507289 | 54507251 | ID=Msa1295970-mRNA-1:exon:15682;Parent=Msa1295970-mRNA-1 |
| chr8_3 | exon | 54507393 | 54508338 | 54507393 | ID=Msa1295970-mRNA-1:exon:15681;Parent=Msa1295970-mRNA-1 |
| chr8_3 | exon | 54508359 | 54508422 | 54508359 | ID=Msa1295970-mRNA-1:exon:15680;Parent=Msa1295970-mRNA-1 |
| chr8_3 | five_prime_UTR | 54508359 | 54508422 | 54508359 | ID=Msa1295970-mRNA-1:five_prime_utr;Parent=Msa1295970-mRNA-1 |
| chr8_3 | five_prime_UTR | 54508290 | 54508338 | 54508290 | ID=Msa1295970-mRNA-1:five_prime_utr;Parent=Msa1295970-mRNA-1 |
| chr8_3 | CDS | 54507393 | 54508289 | 54507393 | ID=Msa1295970-mRNA-1:cds;Parent=Msa1295970-mRNA-1 |
| chr8_3 | CDS | 54507251 | 54507289 | 54507251 | ID=Msa1295970-mRNA-1:cds;Parent=Msa1295970-mRNA-1 |
| chr8_3 | CDS | 54505527 | 54505637 | 54505527 | ID=Msa1295970-mRNA-1:cds;Parent=Msa1295970-mRNA-1 |
| chr8_3 | CDS | 54505213 | 54505290 | 54505213 | ID=Msa1295970-mRNA-1:cds;Parent=Msa1295970-mRNA-1 |
| chr8_3 | three_prime_UTR | 54504859 | 54505212 | 54504859 | ID=Msa1295970-mRNA-1:three_prime_utr;Parent=Msa1295970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
