Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1203030 | A0A396GPQ1 | 75.493 | 355 | 75 | 5 | 1 | 347 | 1 | 351 | 4.10e-156 | 452 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0212340 | Msa1203030 | 0.821873 | 3.202345e-53 | -8.615850e-47 |
| Msa0212400 | Msa1203030 | 0.814243 | 1.701385e-51 | -8.615850e-47 |
| Msa1203030 | Msa1295970 | 0.923035 | 4.510855e-89 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1203030 | MtrunA17_Chr8g0373411 | 75.493 | 355 | 75 | 5 | 1 | 347 | 1 | 351 | 7.89e-160 | 452 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 93 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGACTTTCGATTTGGAGTA+TGG | 0.269103 | 8_1:-56776383 | None:intergenic |
| ACGACTTTCGATTTGGAGTA+TGG | 0.269103 | 8_1:-56776773 | None:intergenic |
| TCTTCTTACTAAAGATGATT+TGG | 0.269999 | 8_1:+56777065 | Msa1203030:CDS |
| CGAATCAACCATTGTCAAAA+TGG | 0.291216 | 8_1:-56776737 | None:intergenic |
| TAATAGCGATGGAAAACTTT+TGG | 0.298332 | 8_1:-56776241 | None:intergenic |
| AAGTCGTATCGATAAATTAA+TGG | 0.313006 | 8_1:+56776399 | Msa1203030:CDS |
| TTAGCGGCGGCTGGCGGTGG+AGG | 0.345735 | 8_1:-56776322 | None:intergenic |
| AGAATTTCATAGGTATTATC+TGG | 0.346349 | 8_1:+56779657 | Msa1203030:three_prime_UTR |
| TTAGCGGCGGCCGGCGGTGG+AGG | 0.347728 | 8_1:-56776532 | None:intergenic |
| GCGGCGGCCGGCGGTGGAGG+AGG | 0.356060 | 8_1:-56776529 | None:intergenic |
| GCGGCGGCTGGCGGTGGAGG+AGG | 0.358056 | 8_1:-56776319 | None:intergenic |
| CTCACGAATAACTTCTTTGT+TGG | 0.358997 | 8_1:-56776824 | None:intergenic |
| TATCGATACGACTTTCGATT+TGG | 0.359518 | 8_1:-56776390 | None:intergenic |
| GAATTAGCGGCGGCTGGCGG+TGG | 0.370125 | 8_1:-56776325 | None:intergenic |
| TTAATAGTCGAGAATTTCAT+AGG | 0.372343 | 8_1:+56779647 | Msa1203030:three_prime_UTR |
| GAATTAGCGGCGGCCGGCGG+TGG | 0.372608 | 8_1:-56776535 | None:intergenic |
| TATCGATACGACTTTCGATT+TGG | 0.375478 | 8_1:-56776780 | None:intergenic |
| CAGTTTGACAATGGTTCATT+CGG | 0.377337 | 8_1:+56776348 | Msa1203030:exon |
| AAAATCAACCATTGTCGAAC+TGG | 0.403034 | 8_1:-56776557 | None:intergenic |
| ACGAATACCTTGTTCATTGT+TGG | 0.403307 | 8_1:-56776431 | None:intergenic |
| CGAATGAACCATTGTCAAAC+TGG | 0.404357 | 8_1:-56776347 | None:intergenic |
| CAGGTTTCGAAACAAATTGA+TGG | 0.406467 | 8_1:-56777095 | None:intergenic |
| GCGGTGGAGGAGGGTTTGTA+AGG | 0.409449 | 8_1:-56776519 | None:intergenic |
| GCGGCCGGCCGTCGTGGATG+AGG | 0.417720 | 8_1:-56776706 | None:intergenic |
| AGTGAACAAACTCCTTCATT+TGG | 0.419970 | 8_1:-56779454 | None:intergenic |
| TACAGGCATATCCATCCAAC+AGG | 0.421570 | 8_1:+56776635 | Msa1203030:CDS |
| GGATTAAACAAACTATGTTC+TGG | 0.423889 | 8_1:-56777003 | None:intergenic |
| CGTGAGTTGAAGAGGCTTAG+TGG | 0.427587 | 8_1:+56776841 | Msa1203030:CDS |
| TGTCTCGACTATTAGATTGC+TGG | 0.436263 | 8_1:-56779053 | None:intergenic |
| TCCACACTAGTACTACAATT+AGG | 0.439291 | 8_1:-56779526 | None:intergenic |
| CGGCGGCTGGCGGTGGAGGA+GGG | 0.444108 | 8_1:-56776318 | None:intergenic |
| CGGCGGCCGGCGGTGGAGGA+GGG | 0.453878 | 8_1:-56776528 | None:intergenic |
| ACGAATAACTTCTTTGTTGG+TGG | 0.458657 | 8_1:-56776821 | None:intergenic |
| TAAAATGCAATAGGTTCTGA+TGG | 0.462667 | 8_1:+56779346 | Msa1203030:intron |
| ATAACTTCTTTGTTGGTGGT+TGG | 0.466863 | 8_1:-56776817 | None:intergenic |
| CGATCGTATCGATGAACTAC+AGG | 0.470708 | 8_1:+56776618 | Msa1203030:CDS |
| TGCAGATCTCTGCAATCATC+AGG | 0.472868 | 8_1:-56777114 | None:intergenic |
| CTACTACCTTTCAAAATAGC+TGG | 0.473726 | 8_1:-56779620 | None:intergenic |
| ATTGATACAGAATGACGAAA+TGG | 0.473840 | 8_1:-56777148 | None:intergenic |
| TTGAGGACTTACTTCAAAGT+TGG | 0.477486 | 8_1:-56777392 | None:intergenic |
| ATTAGATTGCTGGCCATAGT+TGG | 0.482317 | 8_1:-56779043 | None:intergenic |
| TTAGCGGCGGCCGGCCGTCG+TGG | 0.485588 | 8_1:-56776712 | None:intergenic |
| CGCTAATTCCAGTTCGACAA+TGG | 0.485959 | 8_1:+56776549 | Msa1203030:CDS |
| TCGTGGCTTGAACGCAATCC+TGG | 0.486195 | 8_1:+56777177 | Msa1203030:CDS |
| GTAAAATATCTGCAACAAGC+TGG | 0.489711 | 8_1:+56779739 | Msa1203030:three_prime_UTR |
| GGAACACATTATTAGTGAGT+TGG | 0.493694 | 8_1:+56776657 | Msa1203030:CDS |
| TCAGACACCGGAAATGGAAA+GGG | 0.498482 | 8_1:+56779008 | Msa1203030:intron |
| AGAAGCATCGGATCACCATC+AGG | 0.500172 | 8_1:-56777045 | None:intergenic |
| CGGCCGGCCGTCGTGGATGA+GGG | 0.504990 | 8_1:-56776705 | None:intergenic |
| GGTTCTGATGGGTTTGCCGT+TGG | 0.507165 | 8_1:+56779358 | Msa1203030:intron |
| AAACCCTCATCCACGACGGC+CGG | 0.508743 | 8_1:+56776702 | Msa1203030:CDS |
| TTCAGACACCGGAAATGGAA+AGG | 0.511032 | 8_1:+56779007 | Msa1203030:intron |
| TCTGTAACTATTAATAGCGA+TGG | 0.515541 | 8_1:-56776252 | None:intergenic |
| CGCTAATTCCAGTTTGACAA+TGG | 0.517721 | 8_1:+56776339 | Msa1203030:exon |
| GATGAAGATGCTAGAGCAAA+AGG | 0.518055 | 8_1:+56779389 | Msa1203030:CDS |
| AAGTTATTCGTGAGTTGAAG+AGG | 0.523412 | 8_1:+56776833 | Msa1203030:CDS |
| AGGTGATGATGTTGTGATGC+TGG | 0.524320 | 8_1:+56779409 | Msa1203030:CDS |
| ACTAATAATGTGTTCCCTGT+TGG | 0.528420 | 8_1:-56776650 | None:intergenic |
| AAACTGGAATTAGCGGCGGC+TGG | 0.530827 | 8_1:-56776331 | None:intergenic |
| CATTGTCAAAATGGAATTAG+CGG | 0.532954 | 8_1:-56776728 | None:intergenic |
| ATACCTTGTTCATTGTTGGT+TGG | 0.548488 | 8_1:-56776427 | None:intergenic |
| ACAAGCTGGAATAGCTCAGT+TGG | 0.551188 | 8_1:+56779753 | Msa1203030:three_prime_UTR |
| TACAAACCCTCCTCCACCGC+CGG | 0.553250 | 8_1:+56776522 | Msa1203030:CDS |
| CATTGTCAAACTGGAATTAG+CGG | 0.554257 | 8_1:-56776338 | None:intergenic |
| AAAATGCAATAGGTTCTGAT+GGG | 0.560085 | 8_1:+56779347 | Msa1203030:intron |
| CATTGTCGAACTGGAATTAG+CGG | 0.561644 | 8_1:-56776548 | None:intergenic |
| AAAATGGAATTAGCGGCGGC+CGG | 0.569456 | 8_1:-56776721 | None:intergenic |
| GCTCAGTTGGTTAGAGTGTG+TGG | 0.570996 | 8_1:+56779766 | Msa1203030:three_prime_UTR |
| GAACTGGAATTAGCGGCGGC+CGG | 0.573910 | 8_1:-56776541 | None:intergenic |
| GAGAGGTTAGAGCCAAATGA+AGG | 0.575617 | 8_1:+56779442 | Msa1203030:three_prime_UTR |
| CTGGAATTAGCGGCGGCCGG+CGG | 0.578842 | 8_1:-56776538 | None:intergenic |
| ATTGAGAAAACTTGTGTCGT+TGG | 0.579887 | 8_1:+56776949 | Msa1203030:CDS |
| ATAGCTGGTAGTATTGAGAA+AGG | 0.584255 | 8_1:-56779605 | None:intergenic |
| AAGTCGTATCGATAAACTAA+AGG | 0.586014 | 8_1:+56776789 | Msa1203030:CDS |
| ACTATGTTCTGGAGAAGCAA+AGG | 0.588494 | 8_1:-56776992 | None:intergenic |
| ATAATGTGTTCCCTGTTGGA+TGG | 0.600001 | 8_1:-56776646 | None:intergenic |
| ACTTACTTCAAAGTTGGCAG+CGG | 0.600406 | 8_1:-56777386 | None:intergenic |
| TCCTAATTGTAGTACTAGTG+TGG | 0.603843 | 8_1:+56779525 | Msa1203030:three_prime_UTR |
| TCTTCATCATCATGCTCCAA+CGG | 0.617314 | 8_1:-56779374 | None:intergenic |
| TCGTATCGATAAACTAAAGG+AGG | 0.621892 | 8_1:+56776792 | Msa1203030:CDS |
| CTGGAATTAGCGGCGGCTGG+CGG | 0.623774 | 8_1:-56776328 | None:intergenic |
| TCTGTATCAATGCTAAGTCG+TGG | 0.641490 | 8_1:+56777160 | Msa1203030:CDS |
| TCTTTAGTAAGAAGAAGCAT+CGG | 0.641537 | 8_1:-56777057 | None:intergenic |
| ATTTCATAGGTATTATCTGG+AGG | 0.645100 | 8_1:+56779660 | Msa1203030:three_prime_UTR |
| GATCCAACCAACAATGAACA+AGG | 0.663048 | 8_1:+56776424 | Msa1203030:CDS |
| GCATCGGATCACCATCAGGA+AGG | 0.663524 | 8_1:-56777041 | None:intergenic |
| ACACTCAAATCATTAACACC+AGG | 0.670543 | 8_1:-56777195 | None:intergenic |
| TGTCAAACTGGAATTAGCGG+CGG | 0.685168 | 8_1:-56776335 | None:intergenic |
| TGTCGAACTGGAATTAGCGG+CGG | 0.685336 | 8_1:-56776545 | None:intergenic |
| ATGCTGGAGTAAAATGTGAG+AGG | 0.698079 | 8_1:+56779425 | Msa1203030:exon |
| TGTCAAAATGGAATTAGCGG+CGG | 0.703335 | 8_1:-56776725 | None:intergenic |
| TTACAAACCCTCATCCACGA+CGG | 0.727678 | 8_1:+56776698 | Msa1203030:CDS |
| ACAGGCATATCCATCCAACA+GGG | 0.752977 | 8_1:+56776636 | Msa1203030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTTAAGAATTTTAAATT+TGG | + | chr8_1:56777430-56777449 | Msa1203030:intron | 10.0% |
| !! | TAAAATTAGTTATATTACCT+TGG | + | chr8_1:56777454-56777473 | Msa1203030:intron | 15.0% |
| !! | AGATATTCAAATTTATTGTA+TGG | - | chr8_1:56778120-56778139 | None:intergenic | 15.0% |
| !!! | ATTAATTTGCATGTTTTTTC+AGG | + | chr8_1:56777342-56777361 | Msa1203030:intron | 20.0% |
| !!! | ATTTTAATTGTTCAGAGTTA+AGG | + | chr8_1:56779287-56779306 | Msa1203030:intron | 20.0% |
| !! | AATTACCAAACATTATTCTT+TGG | - | chr8_1:56779323-56779342 | None:intergenic | 20.0% |
| !! | GTAATTGATTAAAATGCAAT+AGG | + | chr8_1:56779337-56779356 | Msa1203030:intron | 20.0% |
| !!! | CTGATATTTTTATTATGACA+TGG | - | chr8_1:56779571-56779590 | None:intergenic | 20.0% |
| !! | AAGTCGTATCGATAAATTAA+TGG | + | chr8_1:56776399-56776418 | Msa1203030:CDS | 25.0% |
| ! | TCTTCTTACTAAAGATGATT+TGG | + | chr8_1:56777065-56777084 | Msa1203030:CDS | 25.0% |
| !!! | AGTTATATTACCTTGGTTTT+TGG | + | chr8_1:56777461-56777480 | Msa1203030:intron | 25.0% |
| ! | AATGTAAACAGATGAATATC+CGG | + | chr8_1:56777598-56777617 | Msa1203030:intron | 25.0% |
| ! | TTTGCTGCTAATTTACTATT+TGG | + | chr8_1:56777753-56777772 | Msa1203030:intron | 25.0% |
| ! | TTGCTGCTAATTTACTATTT+GGG | + | chr8_1:56777754-56777773 | Msa1203030:intron | 25.0% |
| ! | TTGGATTCTCTTTATTAATG+TGG | + | chr8_1:56778177-56778196 | Msa1203030:intron | 25.0% |
| ! | TGGATTCTCTTTATTAATGT+GGG | + | chr8_1:56778178-56778197 | Msa1203030:intron | 25.0% |
| ! | AACAGGGAATAAGAATTATA+GGG | + | chr8_1:56778237-56778256 | Msa1203030:intron | 25.0% |
| ! | AATTGTCAACTAGAGTTTAT+AGG | + | chr8_1:56778281-56778300 | Msa1203030:intron | 25.0% |
| ! | ACATGGAAAACAGAAATAAA+AGG | - | chr8_1:56778324-56778343 | None:intergenic | 25.0% |
| ! | AAACACAAATAAAGAGAACA+AGG | - | chr8_1:56778414-56778433 | None:intergenic | 25.0% |
| !! | TTGTTCTCTTTATTTGTGTT+TGG | + | chr8_1:56778413-56778432 | Msa1203030:intron | 25.0% |
| ! | TATCAATCAAAAACATGTCT+GGG | - | chr8_1:56778500-56778519 | None:intergenic | 25.0% |
| !!! | ACATGTTTTTGATTGATACT+TGG | + | chr8_1:56778502-56778521 | Msa1203030:intron | 25.0% |
| !! | ATACTTGGACTAAATTTTGA+GGG | + | chr8_1:56778517-56778536 | Msa1203030:intron | 25.0% |
| ! | ACATAACAGAATGCAATTAA+AGG | - | chr8_1:56778553-56778572 | None:intergenic | 25.0% |
| ! | TAAGTCATTTACATTGTTGT+GGG | + | chr8_1:56778675-56778694 | Msa1203030:intron | 25.0% |
| ! | CAAAACCAAAGAATAATGTT+TGG | + | chr8_1:56779315-56779334 | Msa1203030:intron | 25.0% |
| ! | TTAATAGTCGAGAATTTCAT+AGG | + | chr8_1:56779647-56779666 | Msa1203030:three_prime_UTR | 25.0% |
| ! | AGAATTTCATAGGTATTATC+TGG | + | chr8_1:56779657-56779676 | Msa1203030:three_prime_UTR | 25.0% |
| !!! | GAAAACTTTTGGTTTGATGT+AGG | - | chr8_1:56776233-56776252 | None:intergenic | 30.0% |
| ! | TAATAGCGATGGAAAACTTT+TGG | - | chr8_1:56776244-56776263 | None:intergenic | 30.0% |
| TCTGTAACTATTAATAGCGA+TGG | - | chr8_1:56776255-56776274 | None:intergenic | 30.0% | |
| CATTGTCAAAATGGAATTAG+CGG | - | chr8_1:56776731-56776750 | None:intergenic | 30.0% | |
| !! | CATTTTGACAATGGTTGATT+CGG | + | chr8_1:56776738-56776757 | Msa1203030:CDS | 30.0% |
| ! | AAGTCGTATCGATAAACTAA+AGG | + | chr8_1:56776789-56776808 | Msa1203030:CDS | 30.0% |
| ! | TTTCTCAATCATCTTTTCCA+AGG | - | chr8_1:56776938-56776957 | None:intergenic | 30.0% |
| GGATTAAACAAACTATGTTC+TGG | - | chr8_1:56777006-56777025 | None:intergenic | 30.0% | |
| ! | TCTTTAGTAAGAAGAAGCAT+CGG | - | chr8_1:56777060-56777079 | None:intergenic | 30.0% |
| ATTGATACAGAATGACGAAA+TGG | - | chr8_1:56777151-56777170 | None:intergenic | 30.0% | |
| !!! | AATTTGCATGTTTTTTCAGG+AGG | + | chr8_1:56777345-56777364 | Msa1203030:intron | 30.0% |
| AAGTAAGTCCTCAATTAGTT+TGG | + | chr8_1:56777401-56777420 | Msa1203030:intron | 30.0% | |
| !!! | TTGGTTTTTGGTACTGTTAT+GGG | + | chr8_1:56777473-56777492 | Msa1203030:intron | 30.0% |
| TAAATTGCAACTGTGTGAAT+CGG | - | chr8_1:56777517-56777536 | None:intergenic | 30.0% | |
| ! | TTTTGTTCTATAAGGATGTG+AGG | - | chr8_1:56777673-56777692 | None:intergenic | 30.0% |
| !! | GTGATGTGTTTTGTTCTATA+AGG | - | chr8_1:56777681-56777700 | None:intergenic | 30.0% |
| CATTGGTCAAAATAGAATCT+GGG | - | chr8_1:56777799-56777818 | None:intergenic | 30.0% | |
| TCATTGGTCAAAATAGAATC+TGG | - | chr8_1:56777800-56777819 | None:intergenic | 30.0% | |
| ! | GCTAATTGCTATTGTTGATT+TGG | + | chr8_1:56778158-56778177 | Msa1203030:intron | 30.0% |
| TGTATCTTGTGAGTTTAGTT+AGG | + | chr8_1:56778204-56778223 | Msa1203030:intron | 30.0% | |
| CAACAGGGAATAAGAATTAT+AGG | + | chr8_1:56778236-56778255 | Msa1203030:intron | 30.0% | |
| ! | TTTGGTTGATATATGACATG+AGG | + | chr8_1:56778431-56778450 | Msa1203030:intron | 30.0% |
| ! | TTGGTTGATATATGACATGA+GGG | + | chr8_1:56778432-56778451 | Msa1203030:intron | 30.0% |
| ATCAATCAAAAACATGTCTG+GGG | - | chr8_1:56778499-56778518 | None:intergenic | 30.0% | |
| GTATCAATCAAAAACATGTC+TGG | - | chr8_1:56778501-56778520 | None:intergenic | 30.0% | |
| ! | GATACTTGGACTAAATTTTG+AGG | + | chr8_1:56778516-56778535 | Msa1203030:intron | 30.0% |
| !! | CTAAATTTTGAGGGAGAAAA+TGG | + | chr8_1:56778526-56778545 | Msa1203030:intron | 30.0% |
| GCATTCTGTTATGTTTATTG+AGG | + | chr8_1:56778559-56778578 | Msa1203030:intron | 30.0% | |
| TTGGATAGCTTGATAAAAGA+GGG | + | chr8_1:56778592-56778611 | Msa1203030:intron | 30.0% | |
| CTAAGTCATTTACATTGTTG+TGG | + | chr8_1:56778674-56778693 | Msa1203030:intron | 30.0% | |
| ! | AGTTTAGAATATGCACTGTT+TGG | + | chr8_1:56778726-56778745 | Msa1203030:intron | 30.0% |
| ACAACAAGAAAAACTCTGTA+AGG | + | chr8_1:56779095-56779114 | Msa1203030:CDS | 30.0% | |
| !!! | TCTTCTTCTTTTGAAGTCAA+TGG | + | chr8_1:56779135-56779154 | Msa1203030:intron | 30.0% |
| ! | TAAAATGCAATAGGTTCTGA+TGG | + | chr8_1:56779346-56779365 | Msa1203030:intron | 30.0% |
| ! | AAAATGCAATAGGTTCTGAT+GGG | + | chr8_1:56779347-56779366 | Msa1203030:intron | 30.0% |
| !! | ATACTACCAGCTATTTTGAA+AGG | + | chr8_1:56779614-56779633 | Msa1203030:three_prime_UTR | 30.0% |
| ATTTCATAGGTATTATCTGG+AGG | + | chr8_1:56779660-56779679 | Msa1203030:three_prime_UTR | 30.0% | |
| !!! | GTTGTGTGGTTCTTTTTTCT+GGG | - | chr8_1:56776283-56776302 | None:intergenic | 35.0% |
| !!! | TGTTGTGTGGTTCTTTTTTC+TGG | - | chr8_1:56776284-56776303 | None:intergenic | 35.0% |
| CATTGTCAAACTGGAATTAG+CGG | - | chr8_1:56776341-56776360 | None:intergenic | 35.0% | |
| CAGTTTGACAATGGTTCATT+CGG | + | chr8_1:56776348-56776367 | Msa1203030:exon | 35.0% | |
| TATCGATACGACTTTCGATT+TGG | - | chr8_1:56776393-56776412 | None:intergenic | 35.0% | |
| ATACCTTGTTCATTGTTGGT+TGG | - | chr8_1:56776430-56776449 | None:intergenic | 35.0% | |
| ACGAATACCTTGTTCATTGT+TGG | - | chr8_1:56776434-56776453 | None:intergenic | 35.0% | |
| AAAATCAACCATTGTCGAAC+TGG | - | chr8_1:56776560-56776579 | None:intergenic | 35.0% | |
| ACTAATAATGTGTTCCCTGT+TGG | - | chr8_1:56776653-56776672 | None:intergenic | 35.0% | |
| GGAACACATTATTAGTGAGT+TGG | + | chr8_1:56776657-56776676 | Msa1203030:CDS | 35.0% | |
| !! | CGCTAATTCCATTTTGACAA+TGG | + | chr8_1:56776729-56776748 | Msa1203030:CDS | 35.0% |
| CGAATCAACCATTGTCAAAA+TGG | - | chr8_1:56776740-56776759 | None:intergenic | 35.0% | |
| TATCGATACGACTTTCGATT+TGG | - | chr8_1:56776393-56776412 | None:intergenic | 35.0% | |
| ! | TCGTATCGATAAACTAAAGG+AGG | + | chr8_1:56776792-56776811 | Msa1203030:CDS | 35.0% |
| !! | ATAACTTCTTTGTTGGTGGT+TGG | - | chr8_1:56776820-56776839 | None:intergenic | 35.0% |
| ACGAATAACTTCTTTGTTGG+TGG | - | chr8_1:56776824-56776843 | None:intergenic | 35.0% | |
| CTCACGAATAACTTCTTTGT+TGG | - | chr8_1:56776827-56776846 | None:intergenic | 35.0% | |
| ! | AAGTTATTCGTGAGTTGAAG+AGG | + | chr8_1:56776833-56776852 | Msa1203030:CDS | 35.0% |
| ATTGAGAAAACTTGTGTCGT+TGG | + | chr8_1:56776949-56776968 | Msa1203030:CDS | 35.0% | |
| ! | GGAAGGATAAAAAGCATATC+TGG | - | chr8_1:56777027-56777046 | None:intergenic | 35.0% |
| !! | ATGCTTTTTATCCTTCCTGA+TGG | + | chr8_1:56777030-56777049 | Msa1203030:CDS | 35.0% |
| CAGGTTTCGAAACAAATTGA+TGG | - | chr8_1:56777098-56777117 | None:intergenic | 35.0% | |
| ACACTCAAATCATTAACACC+AGG | - | chr8_1:56777198-56777217 | None:intergenic | 35.0% | |
| TAGTATATCCAATCCAGCAA+AGG | - | chr8_1:56777299-56777318 | None:intergenic | 35.0% | |
| TTGAGGACTTACTTCAAAGT+TGG | - | chr8_1:56777395-56777414 | None:intergenic | 35.0% | |
| !! | TCCTCAATTAGTTTGGTGTT+TGG | + | chr8_1:56777408-56777427 | Msa1203030:intron | 35.0% |
| ACCAAACACCAAACTAATTG+AGG | - | chr8_1:56777412-56777431 | None:intergenic | 35.0% | |
| CATAACAGTACCAAAAACCA+AGG | - | chr8_1:56777474-56777493 | None:intergenic | 35.0% | |
| !!! | CTTGGTTTTTGGTACTGTTA+TGG | + | chr8_1:56777472-56777491 | Msa1203030:intron | 35.0% |
| AAATTGCAACTGTGTGAATC+GGG | - | chr8_1:56777516-56777535 | None:intergenic | 35.0% | |
| TTCACACAGTTGCAATTTAC+AGG | + | chr8_1:56777518-56777537 | Msa1203030:intron | 35.0% | |
| TCACACAGTTGCAATTTACA+GGG | + | chr8_1:56777519-56777538 | Msa1203030:intron | 35.0% | |
| GGGAAAAAATAGATCGACAA+TGG | + | chr8_1:56777539-56777558 | Msa1203030:intron | 35.0% | |
| AAATAGAATCTGGGCCATAA+AGG | - | chr8_1:56777790-56777809 | None:intergenic | 35.0% | |
| TACACAGGTAATGACATGTA+GGG | - | chr8_1:56777860-56777879 | None:intergenic | 35.0% | |
| AACAGACACATTAGAGCTAA+TGG | + | chr8_1:56777913-56777932 | Msa1203030:intron | 35.0% | |
| ACAGACACATTAGAGCTAAT+GGG | + | chr8_1:56777914-56777933 | Msa1203030:intron | 35.0% | |
| ! | GATTTGACTTTCGTGAGAAA+AGG | - | chr8_1:56777984-56778003 | None:intergenic | 35.0% |
| GTCAAATCTGTAGTTGAGTA+AGG | + | chr8_1:56777996-56778015 | Msa1203030:intron | 35.0% | |
| AGTTAGGACTTCAAAACAAC+AGG | + | chr8_1:56778220-56778239 | Msa1203030:intron | 35.0% | |
| GTTAGGACTTCAAAACAACA+GGG | + | chr8_1:56778221-56778240 | Msa1203030:intron | 35.0% | |
| ! | TTCTGTTTTCCATGTTGAAG+AGG | + | chr8_1:56778329-56778348 | Msa1203030:intron | 35.0% |
| ! | TCTGTTTTCCATGTTGAAGA+GGG | + | chr8_1:56778330-56778349 | Msa1203030:intron | 35.0% |
| TTGATATATGACATGAGGGA+TGG | + | chr8_1:56778436-56778455 | Msa1203030:intron | 35.0% | |
| TGATATATGACATGAGGGAT+GGG | + | chr8_1:56778437-56778456 | Msa1203030:intron | 35.0% | |
| ATGTTTATTGAGGCGTAAAG+TGG | + | chr8_1:56778569-56778588 | Msa1203030:intron | 35.0% | |
| GTTGGATAGCTTGATAAAAG+AGG | + | chr8_1:56778591-56778610 | Msa1203030:intron | 35.0% | |
| ATAGCTTGATAAAAGAGGGT+TGG | + | chr8_1:56778596-56778615 | Msa1203030:intron | 35.0% | |
| CATGTAATGCACTAATGTGT+TGG | + | chr8_1:56778752-56778771 | Msa1203030:intron | 35.0% | |
| ! | TAATGCACTAATGTGTTGGT+AGG | + | chr8_1:56778756-56778775 | Msa1203030:intron | 35.0% |
| !!! | TTGCATGTTTTTTCAGACAC+CGG | + | chr8_1:56778996-56779015 | Msa1203030:intron | 35.0% |
| ! | AGTTTTTCCCTTTCCATTTC+CGG | - | chr8_1:56779018-56779037 | None:intergenic | 35.0% |
| TATACATATGTTAGCCCACA+TGG | + | chr8_1:56779203-56779222 | Msa1203030:intron | 35.0% | |
| AGTGAACAAACTCCTTCATT+TGG | - | chr8_1:56779457-56779476 | None:intergenic | 35.0% | |
| !!! | GCTGTTTTGAGTTCAAAGTT+GGG | - | chr8_1:56779496-56779515 | None:intergenic | 35.0% |
| !!! | AGCTGTTTTGAGTTCAAAGT+TGG | - | chr8_1:56779497-56779516 | None:intergenic | 35.0% |
| TCCTAATTGTAGTACTAGTG+TGG | + | chr8_1:56779525-56779544 | Msa1203030:three_prime_UTR | 35.0% | |
| TCCACACTAGTACTACAATT+AGG | - | chr8_1:56779529-56779548 | None:intergenic | 35.0% | |
| ! | ATAGCTGGTAGTATTGAGAA+AGG | - | chr8_1:56779608-56779627 | None:intergenic | 35.0% |
| CTACTACCTTTCAAAATAGC+TGG | - | chr8_1:56779623-56779642 | None:intergenic | 35.0% | |
| GTAAAATATCTGCAACAAGC+TGG | + | chr8_1:56779739-56779758 | Msa1203030:three_prime_UTR | 35.0% | |
| TTGTAAATCTGCGTGTTGTG+TGG | - | chr8_1:56776297-56776316 | None:intergenic | 40.0% | |
| CGCTAATTCCAGTTTGACAA+TGG | + | chr8_1:56776339-56776358 | Msa1203030:exon | 40.0% | |
| CGAATGAACCATTGTCAAAC+TGG | - | chr8_1:56776350-56776369 | None:intergenic | 40.0% | |
| !! | ACGACTTTCGATTTGGAGTA+TGG | - | chr8_1:56776386-56776405 | None:intergenic | 40.0% |
| GATCCAACCAACAATGAACA+AGG | + | chr8_1:56776424-56776443 | Msa1203030:CDS | 40.0% | |
| CATTGTCGAACTGGAATTAG+CGG | - | chr8_1:56776551-56776570 | None:intergenic | 40.0% | |
| ATAATGTGTTCCCTGTTGGA+TGG | - | chr8_1:56776649-56776668 | None:intergenic | 40.0% | |
| TGTCAAAATGGAATTAGCGG+CGG | - | chr8_1:56776728-56776747 | None:intergenic | 40.0% | |
| !! | ACGACTTTCGATTTGGAGTA+TGG | - | chr8_1:56776386-56776405 | None:intergenic | 40.0% |
| ! | GATTTTCGACGAAAAAGCCT+TGG | + | chr8_1:56776918-56776937 | Msa1203030:CDS | 40.0% |
| !! | ACTATGTTCTGGAGAAGCAA+AGG | - | chr8_1:56776995-56777014 | None:intergenic | 40.0% |
| TCTGTATCAATGCTAAGTCG+TGG | + | chr8_1:56777160-56777179 | Msa1203030:CDS | 40.0% | |
| !!! | TTTTGTTGCTTTGCCTTTGC+TGG | + | chr8_1:56777283-56777302 | Msa1203030:intron | 40.0% |
| ACTTACTTCAAAGTTGGCAG+CGG | - | chr8_1:56777389-56777408 | None:intergenic | 40.0% | |
| !! | TTTTTGGTACTGTTATGGGC+TGG | + | chr8_1:56777477-56777496 | Msa1203030:intron | 40.0% |
| TAAGGATGTGAGGAAAGAGT+GGG | - | chr8_1:56777663-56777682 | None:intergenic | 40.0% | |
| ATAAGGATGTGAGGAAAGAG+TGG | - | chr8_1:56777664-56777683 | None:intergenic | 40.0% | |
| TTCTGTCCAAACCCATTATG+TGG | - | chr8_1:56777731-56777750 | None:intergenic | 40.0% | |
| TTTGAGTGAGGGAGAATCAT+TGG | - | chr8_1:56777816-56777835 | None:intergenic | 40.0% | |
| CTACACAGGTAATGACATGT+AGG | - | chr8_1:56777861-56777880 | None:intergenic | 40.0% | |
| CTACATGTCATTACCTGTGT+AGG | + | chr8_1:56777859-56777878 | Msa1203030:intron | 40.0% | |
| ! | ATGTGTCTGTTTCTCAAACC+TGG | - | chr8_1:56777904-56777923 | None:intergenic | 40.0% |
| TTGACTTTCGTGAGAAAAGG+AGG | - | chr8_1:56777981-56778000 | None:intergenic | 40.0% | |
| TCTGTAGTTGAGTAAGGTGT+TGG | + | chr8_1:56778002-56778021 | Msa1203030:intron | 40.0% | |
| TTTCCCTTGTTGGAGAAAGA+GGG | - | chr8_1:56778059-56778078 | None:intergenic | 40.0% | |
| ATTTCCCTTGTTGGAGAAAG+AGG | - | chr8_1:56778060-56778079 | None:intergenic | 40.0% | |
| ! | CTGTTTTCCATGTTGAAGAG+GGG | + | chr8_1:56778331-56778350 | Msa1203030:intron | 40.0% |
| CATCGACAAAATAACAGCTC+AGG | - | chr8_1:56778378-56778397 | None:intergenic | 40.0% | |
| TTATTGAGGCGTAAAGTGGT+TGG | + | chr8_1:56778573-56778592 | Msa1203030:intron | 40.0% | |
| !! | GGTGTCATTAAACATGCTAG+CGG | + | chr8_1:56778777-56778796 | Msa1203030:intron | 40.0% |
| ! | GTGTCATTAAACATGCTAGC+GGG | + | chr8_1:56778778-56778797 | Msa1203030:intron | 40.0% |
| GGAATGTTGTCTCGTTGTAT+TGG | + | chr8_1:56778818-56778837 | Msa1203030:intron | 40.0% | |
| !!! | GTTTTTTCAGACACCGGAAA+TGG | + | chr8_1:56779002-56779021 | Msa1203030:intron | 40.0% |
| GAAAAACTCTCTGCCAACTA+TGG | + | chr8_1:56779030-56779049 | Msa1203030:CDS | 40.0% | |
| ATTAGATTGCTGGCCATAGT+TGG | - | chr8_1:56779046-56779065 | None:intergenic | 40.0% | |
| TGTCTCGACTATTAGATTGC+TGG | - | chr8_1:56779056-56779075 | None:intergenic | 40.0% | |
| TCTTCATCATCATGCTCCAA+CGG | - | chr8_1:56779377-56779396 | None:intergenic | 40.0% | |
| GATGAAGATGCTAGAGCAAA+AGG | + | chr8_1:56779389-56779408 | Msa1203030:CDS | 40.0% | |
| ATGCTGGAGTAAAATGTGAG+AGG | + | chr8_1:56779425-56779444 | Msa1203030:exon | 40.0% | |
| TGTCAAACTGGAATTAGCGG+CGG | - | chr8_1:56776338-56776357 | None:intergenic | 45.0% | |
| ! | AGGGTTTGTAAGGTTTTGCG+TGG | - | chr8_1:56776512-56776531 | None:intergenic | 45.0% |
| CGCTAATTCCAGTTCGACAA+TGG | + | chr8_1:56776549-56776568 | Msa1203030:CDS | 45.0% | |
| ! | CGATCGTATCGATGAACTAC+AGG | + | chr8_1:56776618-56776637 | Msa1203030:CDS | 45.0% |
| TACAGGCATATCCATCCAAC+AGG | + | chr8_1:56776635-56776654 | Msa1203030:CDS | 45.0% | |
| ACAGGCATATCCATCCAACA+GGG | + | chr8_1:56776636-56776655 | Msa1203030:CDS | 45.0% | |
| TTACAAACCCTCATCCACGA+CGG | + | chr8_1:56776698-56776717 | Msa1203030:CDS | 45.0% | |
| TGCAGATCTCTGCAATCATC+AGG | - | chr8_1:56777117-56777136 | None:intergenic | 45.0% | |
| TTGCTTTGCCTTTGCTGGAT+TGG | + | chr8_1:56777288-56777307 | Msa1203030:intron | 45.0% | |
| TCCAAACCCATTATGTGGCA+GGG | - | chr8_1:56777726-56777745 | None:intergenic | 45.0% | |
| TGGGCCATAAAGGAGAATCT+GGG | - | chr8_1:56777780-56777799 | None:intergenic | 45.0% | |
| ATTCTCCCTCACTCAAACCA+TGG | + | chr8_1:56777819-56777838 | Msa1203030:intron | 45.0% | |
| AACCATGGCACTCAATCCAA+TGG | + | chr8_1:56777834-56777853 | Msa1203030:intron | 45.0% | |
| GTAATGACATGTAGGGCCAT+TGG | - | chr8_1:56777853-56777872 | None:intergenic | 45.0% | |
| CATGTCATTACCTGTGTAGG+TGG | + | chr8_1:56777862-56777881 | Msa1203030:intron | 45.0% | |
| AAGACTAATGCCACCTACAC+AGG | - | chr8_1:56777875-56777894 | None:intergenic | 45.0% | |
| AATTCGCACGTTGATGTGTC+TGG | - | chr8_1:56777940-56777959 | None:intergenic | 45.0% | |
| TCGTGAGAAAAGGAGGACAA+GGG | - | chr8_1:56777974-56777993 | None:intergenic | 45.0% | |
| TTCGTGAGAAAAGGAGGACA+AGG | - | chr8_1:56777975-56777994 | None:intergenic | 45.0% | |
| TTCCCTTGTTGGAGAAAGAG+GGG | - | chr8_1:56778058-56778077 | None:intergenic | 45.0% | |
| CGTCGAAACATTTCCCTTGT+TGG | - | chr8_1:56778069-56778088 | None:intergenic | 45.0% | |
| GAAATGTTTCGACGTTCTCG+CGG | + | chr8_1:56778075-56778094 | Msa1203030:intron | 45.0% | |
| AAATGTTTCGACGTTCTCGC+GGG | + | chr8_1:56778076-56778095 | Msa1203030:intron | 45.0% | |
| CGGGTTCATGTTCTAGCATT+TGG | + | chr8_1:56778797-56778816 | Msa1203030:intron | 45.0% | |
| !! | GTACAAAAGTGTCCTAGCCA+CGG | - | chr8_1:56778858-56778877 | None:intergenic | 45.0% |
| TTCAGACACCGGAAATGGAA+AGG | + | chr8_1:56779007-56779026 | Msa1203030:intron | 45.0% | |
| TCAGACACCGGAAATGGAAA+GGG | + | chr8_1:56779008-56779027 | Msa1203030:intron | 45.0% | |
| ACAAGCACATGCATCCATGT+GGG | - | chr8_1:56779220-56779239 | None:intergenic | 45.0% | |
| AACAAGCACATGCATCCATG+TGG | - | chr8_1:56779221-56779240 | None:intergenic | 45.0% | |
| ACATGGATGCATGTGCTTGT+TGG | + | chr8_1:56779220-56779239 | Msa1203030:intron | 45.0% | |
| !! | GCTTGTTGGCTAGTCTTACA+AGG | + | chr8_1:56779234-56779253 | Msa1203030:intron | 45.0% |
| ! | AGGTGATGATGTTGTGATGC+TGG | + | chr8_1:56779409-56779428 | Msa1203030:CDS | 45.0% |
| GAGAGGTTAGAGCCAAATGA+AGG | + | chr8_1:56779442-56779461 | Msa1203030:three_prime_UTR | 45.0% | |
| ACAAGCTGGAATAGCTCAGT+TGG | + | chr8_1:56779753-56779772 | Msa1203030:three_prime_UTR | 45.0% | |
| TGTCGAACTGGAATTAGCGG+CGG | - | chr8_1:56776548-56776567 | None:intergenic | 50.0% | |
| AAAATGGAATTAGCGGCGGC+CGG | - | chr8_1:56776724-56776743 | None:intergenic | 50.0% | |
| ! | CGTGAGTTGAAGAGGCTTAG+TGG | + | chr8_1:56776841-56776860 | Msa1203030:CDS | 50.0% |
| !! | AGAAGCATCGGATCACCATC+AGG | - | chr8_1:56777048-56777067 | None:intergenic | 50.0% |
| !! | GTTATGGGCTGGTGTGTGTT+AGG | + | chr8_1:56777488-56777507 | Msa1203030:intron | 50.0% |
| CTGTAGGAGCTTTGCTCTGT+GGG | - | chr8_1:56777626-56777645 | None:intergenic | 50.0% | |
| ACTGTAGGAGCTTTGCTCTG+TGG | - | chr8_1:56777627-56777646 | None:intergenic | 50.0% | |
| ACAGAGCAAAGCTCCTACAG+TGG | + | chr8_1:56777626-56777645 | Msa1203030:intron | 50.0% | |
| GATGTGAGGAAAGAGTGGGA+GGG | - | chr8_1:56777659-56777678 | None:intergenic | 50.0% | |
| CATTATGTGGCAGGGAGTGA+GGG | - | chr8_1:56777718-56777737 | None:intergenic | 50.0% | |
| CTCACTCCCTGCCACATAAT+GGG | + | chr8_1:56777717-56777736 | Msa1203030:intron | 50.0% | |
| !! | TCCCTGCCACATAATGGGTT+TGG | + | chr8_1:56777722-56777741 | Msa1203030:intron | 50.0% |
| GTCCAAACCCATTATGTGGC+AGG | - | chr8_1:56777727-56777746 | None:intergenic | 50.0% | |
| TGGGCCCAGATTCTCCTTTA+TGG | + | chr8_1:56777773-56777792 | Msa1203030:intron | 50.0% | |
| CTGGGCCATAAAGGAGAATC+TGG | - | chr8_1:56777781-56777800 | None:intergenic | 50.0% | |
| GAGTGCCATGGTTTGAGTGA+GGG | - | chr8_1:56777827-56777846 | None:intergenic | 50.0% | |
| TGAGTGCCATGGTTTGAGTG+AGG | - | chr8_1:56777828-56777847 | None:intergenic | 50.0% | |
| !! | GGCATTAGTCTTCGTACTCC+AGG | + | chr8_1:56777883-56777902 | Msa1203030:intron | 50.0% |
| AGGAGGACAAGGGGCAAATT+TGG | - | chr8_1:56777964-56777983 | None:intergenic | 50.0% | |
| CGTGAGAAAAGGAGGACAAG+GGG | - | chr8_1:56777973-56777992 | None:intergenic | 50.0% | |
| TGGAGCATGGGTATTTGGCA+CGG | - | chr8_1:56778033-56778052 | None:intergenic | 50.0% | |
| TTGTTGGAGAAAGAGGGGAG+TGG | - | chr8_1:56778053-56778072 | None:intergenic | 50.0% | |
| ACTCCCCTCTTTCTCCAACA+AGG | + | chr8_1:56778052-56778071 | Msa1203030:intron | 50.0% | |
| CTCCCCTCTTTCTCCAACAA+GGG | + | chr8_1:56778053-56778072 | Msa1203030:intron | 50.0% | |
| CTGCAATCCCCTCTTCAACA+TGG | - | chr8_1:56778341-56778360 | None:intergenic | 50.0% | |
| TGGAAGAAATCTTGCGTCCG+TGG | + | chr8_1:56778838-56778857 | Msa1203030:intron | 50.0% | |
| GCTCAGTTGGTTAGAGTGTG+TGG | + | chr8_1:56779766-56779785 | Msa1203030:three_prime_UTR | 50.0% | |
| AAACTGGAATTAGCGGCGGC+TGG | - | chr8_1:56776334-56776353 | None:intergenic | 55.0% | |
| GCATCGGATCACCATCAGGA+AGG | - | chr8_1:56777044-56777063 | None:intergenic | 55.0% | |
| TCGTGGCTTGAACGCAATCC+TGG | + | chr8_1:56777177-56777196 | Msa1203030:CDS | 55.0% | |
| GGATGTGAGGAAAGAGTGGG+AGG | - | chr8_1:56777660-56777679 | None:intergenic | 55.0% | |
| CCATTATGTGGCAGGGAGTG+AGG | - | chr8_1:56777719-56777738 | None:intergenic | 55.0% | |
| CCTCACTCCCTGCCACATAA+TGG | + | chr8_1:56777716-56777735 | Msa1203030:intron | 55.0% | |
| GGCCATTGGATTGAGTGCCA+TGG | - | chr8_1:56777839-56777858 | None:intergenic | 55.0% | |
| GCATGGGTATTTGGCACGGT+GGG | - | chr8_1:56778029-56778048 | None:intergenic | 55.0% | |
| AGCATGGGTATTTGGCACGG+TGG | - | chr8_1:56778030-56778049 | None:intergenic | 55.0% | |
| GGGAGTGGAGCATGGGTATT+TGG | - | chr8_1:56778038-56778057 | None:intergenic | 55.0% | |
| GAAAGAGGGGAGTGGAGCAT+GGG | - | chr8_1:56778045-56778064 | None:intergenic | 55.0% | |
| AGAAAGAGGGGAGTGGAGCA+TGG | - | chr8_1:56778046-56778065 | None:intergenic | 55.0% | |
| GAAATCTTGCGTCCGTGGCT+AGG | + | chr8_1:56778843-56778862 | Msa1203030:intron | 55.0% | |
| !! | GGTTCTGATGGGTTTGCCGT+TGG | + | chr8_1:56779358-56779377 | Msa1203030:intron | 55.0% |
| GCGGTGGAGGAGGGTTTGTA+AGG | - | chr8_1:56776312-56776331 | None:intergenic | 60.0% | |
| TACAAACCCTCCTCCACCGC+CGG | + | chr8_1:56776312-56776331 | Msa1203030:five_prime_UTR | 60.0% | |
| GAACTGGAATTAGCGGCGGC+CGG | - | chr8_1:56776544-56776563 | None:intergenic | 60.0% | |
| AAACCCTCATCCACGACGGC+CGG | + | chr8_1:56776702-56776721 | Msa1203030:CDS | 60.0% | |
| GAGCTTTGCTCTGTGGGCAC+CGG | - | chr8_1:56777620-56777639 | None:intergenic | 60.0% | |
| !! | GGAGGGTGTCTTGCCACTGT+AGG | - | chr8_1:56777642-56777661 | None:intergenic | 60.0% |
| ! | GCAGGGAGTGAGGGAGCATA+TGG | - | chr8_1:56777709-56777728 | None:intergenic | 60.0% |
| CTGGAATTAGCGGCGGCTGG+CGG | - | chr8_1:56776331-56776350 | None:intergenic | 65.0% | |
| GAATTAGCGGCGGCTGGCGG+TGG | - | chr8_1:56776328-56776347 | None:intergenic | 70.0% | |
| CTGGAATTAGCGGCGGCCGG+CGG | - | chr8_1:56776541-56776560 | None:intergenic | 70.0% | |
| TTAGCGGCGGCTGGCGGTGG+AGG | - | chr8_1:56776325-56776344 | None:intergenic | 75.0% | |
| GAATTAGCGGCGGCCGGCGG+TGG | - | chr8_1:56776538-56776557 | None:intergenic | 75.0% | |
| CGGCCGGCCGTCGTGGATGA+GGG | - | chr8_1:56776708-56776727 | None:intergenic | 75.0% | |
| ! | CGGCGGCTGGCGGTGGAGGA+GGG | - | chr8_1:56776321-56776340 | None:intergenic | 80.0% |
| ! | TTAGCGGCGGCCGGCGGTGG+AGG | - | chr8_1:56776535-56776554 | None:intergenic | 80.0% |
| ! | GCGGCCGGCCGTCGTGGATG+AGG | - | chr8_1:56776709-56776728 | None:intergenic | 80.0% |
| ! | TTAGCGGCGGCCGGCCGTCG+TGG | - | chr8_1:56776715-56776734 | None:intergenic | 80.0% |
| ! | GCGGCGGCTGGCGGTGGAGG+AGG | - | chr8_1:56776322-56776341 | None:intergenic | 85.0% |
| ! | CGGCGGCCGGCGGTGGAGGA+GGG | - | chr8_1:56776531-56776550 | None:intergenic | 85.0% |
| ! | GCGGCGGCCGGCGGTGGAGG+AGG | - | chr8_1:56776532-56776551 | None:intergenic | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 56776225 | 56779790 | 56776225 | ID=Msa1203030;Name=Msa1203030 |
| chr8_1 | mRNA | 56776225 | 56779790 | 56776225 | ID=Msa1203030-mRNA-1;Parent=Msa1203030;Name=Msa1203030-mRNA-1;_AED=0.04;_eAED=0.04;_QI=113|0.75|0.8|1|0.75|0.6|5|354|374 |
| chr8_1 | exon | 56776225 | 56776288 | 56776225 | ID=Msa1203030-mRNA-1:exon:18496;Parent=Msa1203030-mRNA-1 |
| chr8_1 | exon | 56776309 | 56777254 | 56776309 | ID=Msa1203030-mRNA-1:exon:18497;Parent=Msa1203030-mRNA-1 |
| chr8_1 | exon | 56777364 | 56777402 | 56777364 | ID=Msa1203030-mRNA-1:exon:18498;Parent=Msa1203030-mRNA-1 |
| chr8_1 | exon | 56779012 | 56779122 | 56779012 | ID=Msa1203030-mRNA-1:exon:18499;Parent=Msa1203030-mRNA-1 |
| chr8_1 | exon | 56779359 | 56779790 | 56779359 | ID=Msa1203030-mRNA-1:exon:18500;Parent=Msa1203030-mRNA-1 |
| chr8_1 | five_prime_UTR | 56776225 | 56776288 | 56776225 | ID=Msa1203030-mRNA-1:five_prime_utr;Parent=Msa1203030-mRNA-1 |
| chr8_1 | five_prime_UTR | 56776309 | 56776357 | 56776309 | ID=Msa1203030-mRNA-1:five_prime_utr;Parent=Msa1203030-mRNA-1 |
| chr8_1 | CDS | 56776358 | 56777254 | 56776358 | ID=Msa1203030-mRNA-1:cds;Parent=Msa1203030-mRNA-1 |
| chr8_1 | CDS | 56777364 | 56777402 | 56777364 | ID=Msa1203030-mRNA-1:cds;Parent=Msa1203030-mRNA-1 |
| chr8_1 | CDS | 56779012 | 56779122 | 56779012 | ID=Msa1203030-mRNA-1:cds;Parent=Msa1203030-mRNA-1 |
| chr8_1 | CDS | 56779359 | 56779436 | 56779359 | ID=Msa1203030-mRNA-1:cds;Parent=Msa1203030-mRNA-1 |
| chr8_1 | three_prime_UTR | 56779437 | 56779790 | 56779437 | ID=Msa1203030-mRNA-1:three_prime_utr;Parent=Msa1203030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
