Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297350 | XP_003608592.1 | 83.438 | 320 | 45 | 3 | 1 | 319 | 16 | 328 | 0.0 | 539 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297350 | sp|Q1PF16|BH019_ARATH | 50.556 | 180 | 81 | 5 | 139 | 311 | 112 | 290 | 1.08e-52 | 177 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297350 | G7JGD6 | 83.438 | 320 | 45 | 3 | 1 | 319 | 16 | 328 | 0.0 | 539 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1297350 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1133370 | Msa1297350 | 0.931792 | 2.234692e-94 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297350 | MtrunA17_Chr4g0054561 | 83.438 | 320 | 45 | 3 | 1 | 319 | 16 | 328 | 0.0 | 539 |
| Msa1297350 | MtrunA17_Chr4g0054551 | 81.875 | 320 | 50 | 3 | 1 | 319 | 16 | 328 | 0.0 | 533 |
| Msa1297350 | MtrunA17_Chr5g0400671 | 44.023 | 343 | 129 | 11 | 1 | 315 | 15 | 322 | 1.48e-75 | 234 |
| Msa1297350 | MtrunA17_Chr4g0049331 | 49.091 | 220 | 103 | 5 | 105 | 319 | 95 | 310 | 7.58e-57 | 186 |
| Msa1297350 | MtrunA17_Chr2g0280161 | 49.495 | 198 | 88 | 4 | 118 | 311 | 156 | 345 | 4.08e-52 | 175 |
| Msa1297350 | MtrunA17_Chr5g0400661 | 44.635 | 233 | 103 | 8 | 105 | 315 | 105 | 333 | 7.25e-51 | 171 |
| Msa1297350 | MtrunA17_Chr8g0336681 | 44.149 | 188 | 92 | 4 | 139 | 315 | 149 | 334 | 1.22e-47 | 163 |
| Msa1297350 | MtrunA17_Chr6g0468491 | 47.674 | 172 | 86 | 3 | 143 | 311 | 134 | 304 | 2.01e-47 | 162 |
| Msa1297350 | MtrunA17_Chr5g0400621 | 44.167 | 240 | 127 | 4 | 77 | 311 | 87 | 324 | 1.39e-46 | 160 |
| Msa1297350 | MtrunA17_Chr2g0333621 | 46.354 | 192 | 96 | 3 | 129 | 315 | 121 | 310 | 1.66e-46 | 159 |
| Msa1297350 | MtrunA17_Chr2g0307131 | 49.123 | 171 | 83 | 2 | 144 | 311 | 177 | 346 | 4.73e-46 | 159 |
| Msa1297350 | MtrunA17_Chr2g0307141 | 47.953 | 171 | 85 | 2 | 144 | 311 | 181 | 350 | 9.19e-46 | 159 |
| Msa1297350 | MtrunA17_Chr4g0054581 | 43.128 | 211 | 96 | 6 | 110 | 311 | 174 | 369 | 5.53e-45 | 157 |
| Msa1297350 | MtrunA17_Chr4g0033391 | 41.627 | 209 | 103 | 5 | 114 | 319 | 127 | 319 | 2.17e-42 | 149 |
| Msa1297350 | MtrunA17_Chr4g0002801 | 43.011 | 186 | 96 | 4 | 139 | 315 | 145 | 329 | 2.29e-42 | 149 |
| Msa1297350 | MtrunA17_Chr7g0225901 | 47.134 | 157 | 79 | 3 | 143 | 296 | 85 | 240 | 4.97e-42 | 146 |
| Msa1297350 | MtrunA17_Chr4g0002781 | 46.237 | 186 | 89 | 5 | 138 | 315 | 166 | 348 | 1.25e-41 | 147 |
| Msa1297350 | MtrunA17_Chr4g0033291 | 41.546 | 207 | 112 | 4 | 114 | 315 | 121 | 323 | 1.53e-41 | 147 |
| Msa1297350 | MtrunA17_Chr4g0054621 | 41.436 | 181 | 101 | 2 | 131 | 311 | 157 | 332 | 3.25e-40 | 144 |
| Msa1297350 | MtrunA17_Chr2g0333641 | 42.021 | 188 | 107 | 2 | 129 | 315 | 120 | 306 | 2.35e-39 | 140 |
| Msa1297350 | MtrunA17_Chr4g0054571 | 39.560 | 273 | 129 | 8 | 75 | 318 | 66 | 331 | 8.25e-39 | 139 |
| Msa1297350 | MtrunA17_Chr5g0400641 | 44.586 | 157 | 83 | 2 | 149 | 302 | 1 | 156 | 2.61e-36 | 128 |
| Msa1297350 | MtrunA17_Chr4g0033281 | 39.336 | 211 | 118 | 5 | 114 | 319 | 119 | 324 | 6.88e-36 | 132 |
| Msa1297350 | MtrunA17_Chr7g0249811 | 43.889 | 180 | 92 | 3 | 137 | 315 | 156 | 327 | 1.10e-34 | 129 |
| Msa1297350 | MtrunA17_Chr2g0333611 | 36.612 | 183 | 110 | 3 | 139 | 318 | 38 | 217 | 4.10e-33 | 122 |
| Msa1297350 | MtrunA17_Chr2g0333541 | 42.077 | 183 | 96 | 5 | 139 | 314 | 87 | 266 | 4.75e-31 | 118 |
| Msa1297350 | MtrunA17_Chr6g0468461 | 41.290 | 155 | 79 | 2 | 142 | 296 | 169 | 311 | 4.40e-29 | 114 |
| Msa1297350 | MtrunA17_Chr4g0002831 | 33.333 | 168 | 102 | 5 | 149 | 315 | 45 | 203 | 9.54e-21 | 88.6 |
| Msa1297350 | MtrunA17_Chr7g0233441 | 36.879 | 141 | 81 | 3 | 171 | 311 | 59 | 191 | 1.48e-20 | 87.8 |
| Msa1297350 | MtrunA17_Chr4g0002851 | 36.170 | 141 | 74 | 3 | 171 | 311 | 67 | 191 | 1.08e-18 | 82.8 |
| Msa1297350 | MtrunA17_Chr8g0346161 | 28.713 | 202 | 122 | 7 | 127 | 313 | 270 | 464 | 1.25e-15 | 77.4 |
| Msa1297350 | MtrunA17_Chr8g0366751 | 31.928 | 166 | 95 | 5 | 129 | 280 | 448 | 609 | 1.71e-14 | 73.9 |
| Msa1297350 | MtrunA17_Chr7g0260841 | 48.750 | 80 | 36 | 2 | 129 | 206 | 341 | 417 | 1.90e-14 | 73.9 |
| Msa1297350 | MtrunA17_Chr1g0185621 | 57.407 | 54 | 23 | 0 | 146 | 199 | 475 | 528 | 5.63e-14 | 72.4 |
| Msa1297350 | MtrunA17_Chr8g0346151 | 30.935 | 139 | 79 | 4 | 127 | 252 | 258 | 392 | 7.34e-14 | 72.0 |
| Msa1297350 | MtrunA17_Chr7g0275821 | 53.571 | 56 | 26 | 0 | 146 | 201 | 252 | 307 | 3.65e-13 | 69.7 |
| Msa1297350 | MtrunA17_Chr8g0365711 | 29.448 | 163 | 106 | 3 | 139 | 293 | 237 | 398 | 4.02e-13 | 69.7 |
| Msa1297350 | MtrunA17_Chr5g0411341 | 31.214 | 173 | 87 | 7 | 129 | 280 | 479 | 640 | 7.62e-13 | 69.3 |
| Msa1297350 | MtrunA17_Chr4g0028071 | 27.632 | 152 | 92 | 5 | 148 | 288 | 151 | 295 | 3.91e-12 | 66.2 |
| Msa1297350 | MtrunA17_Chr8g0386921 | 40.299 | 67 | 40 | 0 | 143 | 209 | 403 | 469 | 7.84e-12 | 65.9 |
| Msa1297350 | MtrunA17_Chr7g0252041 | 30.625 | 160 | 93 | 5 | 147 | 290 | 287 | 444 | 8.57e-12 | 65.9 |
| Msa1297350 | MtrunA17_Chr3g0131691 | 29.299 | 157 | 97 | 4 | 147 | 290 | 299 | 454 | 3.66e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297350 | AT2G22760.1 | 50.556 | 180 | 81 | 5 | 139 | 311 | 112 | 290 | 1.10e-53 | 177 |
| Msa1297350 | AT4G37850.2 | 43.426 | 251 | 114 | 7 | 88 | 319 | 87 | 328 | 1.90e-52 | 176 |
| Msa1297350 | AT4G37850.1 | 43.426 | 251 | 114 | 7 | 88 | 319 | 87 | 328 | 1.90e-52 | 176 |
| Msa1297350 | AT2G22760.2 | 50.610 | 164 | 74 | 4 | 139 | 296 | 112 | 274 | 2.40e-48 | 164 |
| Msa1297350 | AT2G22770.1 | 47.059 | 221 | 95 | 6 | 116 | 315 | 99 | 318 | 6.75e-48 | 163 |
| Msa1297350 | AT2G22750.2 | 43.825 | 251 | 108 | 9 | 89 | 318 | 66 | 304 | 3.03e-47 | 161 |
| Msa1297350 | AT2G22750.3 | 43.825 | 251 | 108 | 9 | 89 | 318 | 94 | 332 | 3.75e-47 | 162 |
| Msa1297350 | AT2G22750.5 | 43.825 | 251 | 108 | 9 | 89 | 318 | 90 | 328 | 4.25e-47 | 162 |
| Msa1297350 | AT2G22750.4 | 43.825 | 251 | 107 | 10 | 89 | 318 | 94 | 331 | 9.72e-46 | 158 |
| Msa1297350 | AT2G22750.1 | 43.825 | 251 | 107 | 10 | 89 | 318 | 66 | 303 | 1.07e-45 | 157 |
| Msa1297350 | AT2G46510.1 | 50.000 | 82 | 38 | 1 | 120 | 201 | 372 | 450 | 4.81e-16 | 79.0 |
| Msa1297350 | AT1G32640.1 | 35.220 | 159 | 89 | 6 | 129 | 280 | 438 | 589 | 1.54e-15 | 77.8 |
| Msa1297350 | AT1G01260.1 | 35.135 | 111 | 53 | 2 | 143 | 253 | 430 | 521 | 3.18e-14 | 73.6 |
| Msa1297350 | AT1G01260.2 | 35.135 | 111 | 53 | 2 | 143 | 253 | 430 | 521 | 3.18e-14 | 73.6 |
| Msa1297350 | AT1G01260.3 | 35.135 | 111 | 53 | 2 | 143 | 253 | 430 | 521 | 3.18e-14 | 73.6 |
| Msa1297350 | AT5G46760.1 | 28.061 | 196 | 113 | 5 | 129 | 300 | 401 | 592 | 2.41e-13 | 70.9 |
| Msa1297350 | AT4G17880.1 | 31.646 | 158 | 95 | 5 | 129 | 280 | 402 | 552 | 4.40e-13 | 70.1 |
| Msa1297350 | AT1G63650.3 | 38.202 | 89 | 54 | 1 | 141 | 228 | 400 | 488 | 5.13e-13 | 70.1 |
| Msa1297350 | AT1G63650.1 | 38.202 | 89 | 54 | 1 | 141 | 228 | 400 | 488 | 5.13e-13 | 70.1 |
| Msa1297350 | AT1G63650.2 | 38.202 | 89 | 54 | 1 | 141 | 228 | 400 | 488 | 5.13e-13 | 70.1 |
| Msa1297350 | AT4G16430.1 | 43.038 | 79 | 41 | 1 | 127 | 201 | 297 | 375 | 1.95e-12 | 68.2 |
| Msa1297350 | AT4G29930.2 | 30.968 | 155 | 96 | 5 | 147 | 299 | 55 | 200 | 2.52e-12 | 65.9 |
| Msa1297350 | AT1G12860.1 | 29.878 | 164 | 103 | 5 | 147 | 300 | 268 | 429 | 2.94e-12 | 67.4 |
| Msa1297350 | AT1G12860.2 | 31.169 | 154 | 94 | 5 | 147 | 290 | 268 | 419 | 3.28e-12 | 67.4 |
| Msa1297350 | AT4G09820.1 | 26.816 | 179 | 107 | 6 | 139 | 315 | 356 | 512 | 4.92e-12 | 67.0 |
| Msa1297350 | AT4G29930.4 | 49.091 | 55 | 28 | 0 | 148 | 202 | 56 | 110 | 6.18e-12 | 63.9 |
| Msa1297350 | AT4G29930.6 | 30.380 | 158 | 96 | 5 | 147 | 299 | 55 | 203 | 6.55e-12 | 64.7 |
| Msa1297350 | AT3G26744.6 | 31.210 | 157 | 94 | 5 | 147 | 290 | 308 | 463 | 6.86e-12 | 66.2 |
| Msa1297350 | AT4G29930.5 | 31.655 | 139 | 85 | 4 | 147 | 283 | 55 | 185 | 7.23e-12 | 64.7 |
| Msa1297350 | AT3G26744.1 | 31.210 | 157 | 94 | 5 | 147 | 290 | 308 | 463 | 8.46e-12 | 66.2 |
| Msa1297350 | AT3G26744.4 | 31.210 | 157 | 94 | 5 | 147 | 290 | 308 | 463 | 8.46e-12 | 66.2 |
| Msa1297350 | AT3G26744.2 | 31.210 | 157 | 94 | 5 | 147 | 290 | 308 | 463 | 8.46e-12 | 66.2 |
| Msa1297350 | AT5G41315.1 | 34.021 | 97 | 60 | 2 | 146 | 238 | 441 | 537 | 1.03e-11 | 66.2 |
| Msa1297350 | AT4G29930.1 | 48.214 | 56 | 29 | 0 | 147 | 202 | 55 | 110 | 1.06e-11 | 64.3 |
| Msa1297350 | AT4G29930.3 | 48.214 | 56 | 29 | 0 | 147 | 202 | 55 | 110 | 1.07e-11 | 64.7 |
| Msa1297350 | AT4G29930.7 | 48.214 | 56 | 29 | 0 | 147 | 202 | 55 | 110 | 1.07e-11 | 64.7 |
| Msa1297350 | AT5G41315.3 | 33.000 | 100 | 63 | 2 | 143 | 238 | 443 | 542 | 1.09e-11 | 65.9 |
| Msa1297350 | AT5G41315.2 | 33.000 | 100 | 63 | 2 | 143 | 238 | 446 | 545 | 1.10e-11 | 65.9 |
| Msa1297350 | AT5G57150.3 | 45.763 | 59 | 32 | 0 | 144 | 202 | 53 | 111 | 1.64e-11 | 63.5 |
| Msa1297350 | AT5G57150.2 | 45.763 | 59 | 32 | 0 | 144 | 202 | 53 | 111 | 1.70e-11 | 63.5 |
| Msa1297350 | AT5G57150.5 | 45.763 | 59 | 32 | 0 | 144 | 202 | 52 | 110 | 1.76e-11 | 63.5 |
| Msa1297350 | AT5G67110.1 | 37.374 | 99 | 55 | 2 | 106 | 198 | 52 | 149 | 2.04e-11 | 62.8 |
| Msa1297350 | AT5G57150.1 | 45.763 | 59 | 32 | 0 | 144 | 202 | 52 | 110 | 2.44e-11 | 63.2 |
| Msa1297350 | AT5G57150.4 | 45.763 | 59 | 32 | 0 | 144 | 202 | 53 | 111 | 2.65e-11 | 63.5 |
| Msa1297350 | AT5G46830.1 | 26.275 | 255 | 133 | 9 | 60 | 280 | 244 | 477 | 4.36e-11 | 63.9 |
| Msa1297350 | AT2G16910.1 | 25.325 | 154 | 89 | 4 | 147 | 275 | 315 | 467 | 9.09e-11 | 63.2 |
Find 48 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATTGAAGCAAGGGTTTC+TGG | 0.125232 | 8_3:-57561973 | Msa1297350:CDS |
| TATGGAGAAAACTTGAATTT+TGG | 0.186505 | 8_3:-57562654 | Msa1297350:CDS |
| TGCATTCGAGTTTGATGATA+TGG | 0.245986 | 8_3:-57562937 | Msa1297350:CDS |
| GCTCTTTCATCTCTTCTTCC+TGG | 0.251328 | 8_3:-57562498 | Msa1297350:CDS |
| GATGGACAAGGCAACTGTTT+TGG | 0.280749 | 8_3:-57562160 | Msa1297350:CDS |
| TCTTCTTCCTGGACTCAAAA+AGG | 0.317343 | 8_3:-57562487 | Msa1297350:intron |
| AGAATTGTTCTGTGTGCTTT+CGG | 0.323320 | 8_3:+57562833 | None:intergenic |
| AGAATATTGCTTGACAATAA+AGG | 0.327738 | 8_3:-57561414 | Msa1297350:CDS |
| TTCACCCTTGTATCCATGTT+GGG | 0.338276 | 8_3:+57562699 | None:intergenic |
| ACATGATCTTGAGCCTGAAT+AGG | 0.366395 | 8_3:+57562567 | None:intergenic |
| CATGATCTTGAGCCTGAATA+GGG | 0.371001 | 8_3:+57562568 | None:intergenic |
| CTTCACCCTTGTATCCATGT+TGG | 0.403393 | 8_3:+57562698 | None:intergenic |
| AAGAAGCCTAAAACCGAGAT+TGG | 0.405458 | 8_3:-57562678 | Msa1297350:CDS |
| AATAAATAGAAACCCTATTC+AGG | 0.429952 | 8_3:-57562580 | Msa1297350:CDS |
| TTGATCAGGACTACTTTCAA+TGG | 0.442294 | 8_3:+57562806 | None:intergenic |
| TGATCAGGACTACTTTCAAT+GGG | 0.443342 | 8_3:+57562807 | None:intergenic |
| ATGAAAGAGCAATGAATCTC+TGG | 0.459868 | 8_3:+57562511 | None:intergenic |
| AAGAATAAGTACTCTCTTGT+GGG | 0.460152 | 8_3:+57562889 | None:intergenic |
| TCAAGATAGTTATTTCCAAA+TGG | 0.471769 | 8_3:+57561838 | None:intergenic |
| TTCTAATTCGTTGAGTATTG+CGG | 0.481274 | 8_3:+57561897 | None:intergenic |
| CCTAAAACCGAGATTGGGTA+TGG | 0.484824 | 8_3:-57562672 | Msa1297350:CDS |
| CGAATGCATATGAGTCCATT+GGG | 0.496199 | 8_3:+57562952 | None:intergenic |
| TCGAATGCATATGAGTCCAT+TGG | 0.498731 | 8_3:+57562951 | None:intergenic |
| GGGTTCAAAAGAAATGATCT+TGG | 0.501611 | 8_3:+57562719 | None:intergenic |
| TGATATAACCATTGTTACTC+AGG | 0.506395 | 8_3:-57561818 | Msa1297350:intron |
| GGTGAAGCAACAGATTGATC+AGG | 0.522332 | 8_3:+57562792 | None:intergenic |
| TCTCGTAAGGAGCATAAGTC+AGG | 0.525482 | 8_3:-57561390 | Msa1297350:CDS |
| GAAGAATAAGTACTCTCTTG+TGG | 0.530988 | 8_3:+57562888 | None:intergenic |
| TGTTCTGTGTGCTTTCGGAA+TGG | 0.533620 | 8_3:+57562838 | None:intergenic |
| TTGAACCCAACATGGATACA+AGG | 0.536627 | 8_3:-57562704 | Msa1297350:CDS |
| TGAGTATTGCGGTCGCAGAT+CGG | 0.551040 | 8_3:+57561908 | None:intergenic |
| TTTGGAAGTGTGATATCTCA+AGG | 0.551675 | 8_3:-57562636 | Msa1297350:CDS |
| AGAAGCCTAAAACCGAGATT+GGG | 0.552154 | 8_3:-57562677 | Msa1297350:CDS |
| ATCCATTGCGACAGATATTG+TGG | 0.561083 | 8_3:-57561931 | Msa1297350:CDS |
| AAAACATATGAAGCAACTAC+AGG | 0.565504 | 8_3:-57562127 | Msa1297350:CDS |
| GGCCACAATATCTGTCGCAA+TGG | 0.577566 | 8_3:+57561929 | None:intergenic |
| TGACAATAAAGGATCTCGTA+AGG | 0.599743 | 8_3:-57561403 | Msa1297350:CDS |
| TTATTATAAACGAGAGAACA+AGG | 0.617033 | 8_3:-57562610 | Msa1297350:CDS |
| GGAAAGAGTGAAGACATTGG+AGG | 0.623302 | 8_3:-57562106 | Msa1297350:CDS |
| ACTTTGCCTGCAGATGGACA+AGG | 0.625234 | 8_3:-57562172 | Msa1297350:intron |
| TATTGCCGAAAGAAAACGAA+GGG | 0.632199 | 8_3:-57562544 | Msa1297350:CDS |
| AGAATAAGTACTCTCTTGTG+GGG | 0.633544 | 8_3:+57562890 | None:intergenic |
| TAATGATCATGAATACCCAA+TGG | 0.643981 | 8_3:-57562967 | Msa1297350:CDS |
| TGAACCCAACATGGATACAA+GGG | 0.649172 | 8_3:-57562703 | Msa1297350:CDS |
| ACAGGAAAGAGTGAAGACAT+TGG | 0.652927 | 8_3:-57562109 | Msa1297350:CDS |
| GATCAGGACTACTTTCAATG+GGG | 0.707589 | 8_3:+57562808 | None:intergenic |
| TAGAAGTGCTCTGAACAGTG+AGG | 0.733048 | 8_3:+57561866 | None:intergenic |
| TTATTGCCGAAAGAAAACGA+AGG | 0.770641 | 8_3:-57562545 | Msa1297350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTTTTAAAAATTTTAAGT+TGG | + | chr8_3:57562686-57562705 | None:intergenic | 10.0% |
| !!! | AAGTTTTAAAAATTTTAAGT+TGG | + | chr8_3:57562686-57562705 | None:intergenic | 10.0% |
| !!! | ATTTTAATTAGGTTTTAAGT+TGG | + | chr8_3:57562714-57562733 | None:intergenic | 15.0% |
| !!! | CAGATTTTATTTAATTTTCA+TGG | - | chr8_3:57562890-57562909 | Msa1297350:CDS | 15.0% |
| !!! | ATTTTAATTAGGTTTTAAGT+TGG | + | chr8_3:57562714-57562733 | None:intergenic | 15.0% |
| !!! | CAGATTTTATTTAATTTTCA+TGG | - | chr8_3:57562890-57562909 | Msa1297350:CDS | 15.0% |
| !!! | GTTTATTTTAAGTTTCTAGT+TGG | - | chr8_3:57562627-57562646 | Msa1297350:CDS | 20.0% |
| !!! | CTCTTATGATCATTTTAATT+AGG | + | chr8_3:57562725-57562744 | None:intergenic | 20.0% |
| !! | TCATGTTGATATATTCTATT+TGG | - | chr8_3:57562796-57562815 | Msa1297350:CDS | 20.0% |
| !!! | GTTTATTTTAAGTTTCTAGT+TGG | - | chr8_3:57562627-57562646 | Msa1297350:CDS | 20.0% |
| !!! | CTCTTATGATCATTTTAATT+AGG | + | chr8_3:57562725-57562744 | None:intergenic | 20.0% |
| !! | TCATGTTGATATATTCTATT+TGG | - | chr8_3:57562796-57562815 | Msa1297350:CDS | 20.0% |
| !! | TATGGAGAAAACTTGAATTT+TGG | - | chr8_3:57561703-57561722 | Msa1297350:intron | 25.0% |
| ! | TTATTATAAACGAGAGAACA+AGG | - | chr8_3:57561747-57561766 | Msa1297350:intron | 25.0% |
| ! | AATAAATAGAAACCCTATTC+AGG | - | chr8_3:57561777-57561796 | Msa1297350:intron | 25.0% |
| !! | TCAAGATAGTTATTTCCAAA+TGG | + | chr8_3:57562522-57562541 | None:intergenic | 25.0% |
| !! | AAATTTTACCTGAGTAACAA+TGG | + | chr8_3:57562550-57562569 | None:intergenic | 25.0% |
| !! | TTTCAAAGTGAGTAATGTTT+TGG | - | chr8_3:57562659-57562678 | Msa1297350:CDS | 25.0% |
| !! | TAAGCCTCTATATTTTATCT+CGG | - | chr8_3:57562855-57562874 | Msa1297350:CDS | 25.0% |
| !! | TTTTCCGAGATAAAATATAG+AGG | + | chr8_3:57562862-57562881 | None:intergenic | 25.0% |
| ! | AGAATATTGCTTGACAATAA+AGG | - | chr8_3:57562943-57562962 | Msa1297350:CDS | 25.0% |
| !! | TATGGAGAAAACTTGAATTT+TGG | - | chr8_3:57561703-57561722 | Msa1297350:intron | 25.0% |
| ! | TTATTATAAACGAGAGAACA+AGG | - | chr8_3:57561747-57561766 | Msa1297350:intron | 25.0% |
| ! | AATAAATAGAAACCCTATTC+AGG | - | chr8_3:57561777-57561796 | Msa1297350:intron | 25.0% |
| !! | TCAAGATAGTTATTTCCAAA+TGG | + | chr8_3:57562522-57562541 | None:intergenic | 25.0% |
| !! | AAATTTTACCTGAGTAACAA+TGG | + | chr8_3:57562550-57562569 | None:intergenic | 25.0% |
| !! | TTTCAAAGTGAGTAATGTTT+TGG | - | chr8_3:57562659-57562678 | Msa1297350:CDS | 25.0% |
| !! | TAAGCCTCTATATTTTATCT+CGG | - | chr8_3:57562855-57562874 | Msa1297350:CDS | 25.0% |
| !! | TTTTCCGAGATAAAATATAG+AGG | + | chr8_3:57562862-57562881 | None:intergenic | 25.0% |
| ! | AGAATATTGCTTGACAATAA+AGG | - | chr8_3:57562943-57562962 | Msa1297350:CDS | 25.0% |
| TAATGATCATGAATACCCAA+TGG | - | chr8_3:57561390-57561409 | Msa1297350:CDS | 30.0% | |
| AAGAATAAGTACTCTCTTGT+GGG | + | chr8_3:57561471-57561490 | None:intergenic | 30.0% | |
| AATCTCACACAATTTGATTG+TGG | - | chr8_3:57561969-57561988 | Msa1297350:CDS | 30.0% | |
| ATATTGCATGTTATATGCAG+GGG | + | chr8_3:57562025-57562044 | None:intergenic | 30.0% | |
| CATATTGCATGTTATATGCA+GGG | + | chr8_3:57562026-57562045 | None:intergenic | 30.0% | |
| AGTTAGTATAGTTGCAATTG+AGG | - | chr8_3:57562120-57562139 | Msa1297350:CDS | 30.0% | |
| AAAACATATGAAGCAACTAC+AGG | - | chr8_3:57562230-57562249 | Msa1297350:intron | 30.0% | |
| !!! | TGCTGATTCGACTTTTTTAT+CGG | + | chr8_3:57562286-57562305 | None:intergenic | 30.0% |
| ! | AAACCCTTGCTTCAATTTTT+GGG | + | chr8_3:57562383-57562402 | None:intergenic | 30.0% |
| ! | TTCTAATTCGTTGAGTATTG+CGG | + | chr8_3:57562463-57562482 | None:intergenic | 30.0% |
| TGATATAACCATTGTTACTC+AGG | - | chr8_3:57562539-57562558 | Msa1297350:CDS | 30.0% | |
| ACTTGTCTTAATTGCATGTT+TGG | - | chr8_3:57562592-57562611 | Msa1297350:CDS | 30.0% | |
| !! | TTACTCACTTTGAAACAAGT+TGG | + | chr8_3:57562654-57562673 | None:intergenic | 30.0% |
| AACTAGGCTAGAACATAAAA+TGG | + | chr8_3:57562749-57562768 | None:intergenic | 30.0% | |
| CATGAACAAAGAATTCTACT+CGG | + | chr8_3:57562781-57562800 | None:intergenic | 30.0% | |
| TAATGATCATGAATACCCAA+TGG | - | chr8_3:57561390-57561409 | Msa1297350:CDS | 30.0% | |
| AAGAATAAGTACTCTCTTGT+GGG | + | chr8_3:57561471-57561490 | None:intergenic | 30.0% | |
| AATCTCACACAATTTGATTG+TGG | - | chr8_3:57561969-57561988 | Msa1297350:CDS | 30.0% | |
| ATATTGCATGTTATATGCAG+GGG | + | chr8_3:57562025-57562044 | None:intergenic | 30.0% | |
| CATATTGCATGTTATATGCA+GGG | + | chr8_3:57562026-57562045 | None:intergenic | 30.0% | |
| AGTTAGTATAGTTGCAATTG+AGG | - | chr8_3:57562120-57562139 | Msa1297350:CDS | 30.0% | |
| AAAACATATGAAGCAACTAC+AGG | - | chr8_3:57562230-57562249 | Msa1297350:intron | 30.0% | |
| !!! | TGCTGATTCGACTTTTTTAT+CGG | + | chr8_3:57562286-57562305 | None:intergenic | 30.0% |
| ! | AAACCCTTGCTTCAATTTTT+GGG | + | chr8_3:57562383-57562402 | None:intergenic | 30.0% |
| ! | TTCTAATTCGTTGAGTATTG+CGG | + | chr8_3:57562463-57562482 | None:intergenic | 30.0% |
| TGATATAACCATTGTTACTC+AGG | - | chr8_3:57562539-57562558 | Msa1297350:CDS | 30.0% | |
| ACTTGTCTTAATTGCATGTT+TGG | - | chr8_3:57562592-57562611 | Msa1297350:CDS | 30.0% | |
| !! | TTACTCACTTTGAAACAAGT+TGG | + | chr8_3:57562654-57562673 | None:intergenic | 30.0% |
| AACTAGGCTAGAACATAAAA+TGG | + | chr8_3:57562749-57562768 | None:intergenic | 30.0% | |
| CATGAACAAAGAATTCTACT+CGG | + | chr8_3:57562781-57562800 | None:intergenic | 30.0% | |
| ! | TGCATTCGAGTTTGATGATA+TGG | - | chr8_3:57561420-57561439 | Msa1297350:CDS | 35.0% |
| AGAATAAGTACTCTCTTGTG+GGG | + | chr8_3:57561470-57561489 | None:intergenic | 35.0% | |
| GAAGAATAAGTACTCTCTTG+TGG | + | chr8_3:57561472-57561491 | None:intergenic | 35.0% | |
| AGAATTGTTCTGTGTGCTTT+CGG | + | chr8_3:57561527-57561546 | None:intergenic | 35.0% | |
| TGATCAGGACTACTTTCAAT+GGG | + | chr8_3:57561553-57561572 | None:intergenic | 35.0% | |
| TTGATCAGGACTACTTTCAA+TGG | + | chr8_3:57561554-57561573 | None:intergenic | 35.0% | |
| !!! | AGTCTTAGTTTTGTTGGTGT+AGG | + | chr8_3:57561589-57561608 | None:intergenic | 35.0% |
| !!! | GACTTGAGTCTTAGTTTTGT+TGG | + | chr8_3:57561595-57561614 | None:intergenic | 35.0% |
| GGGTTCAAAAGAAATGATCT+TGG | + | chr8_3:57561641-57561660 | None:intergenic | 35.0% | |
| ! | CATTTCTTTTGAACCCAACA+TGG | - | chr8_3:57561645-57561664 | Msa1297350:intron | 35.0% |
| ! | TTTGGAAGTGTGATATCTCA+AGG | - | chr8_3:57561721-57561740 | Msa1297350:intron | 35.0% |
| TTATTGCCGAAAGAAAACGA+AGG | - | chr8_3:57561812-57561831 | Msa1297350:intron | 35.0% | |
| TATTGCCGAAAGAAAACGAA+GGG | - | chr8_3:57561813-57561832 | Msa1297350:intron | 35.0% | |
| ! | CTTTTCCCTTCGTTTTCTTT+CGG | + | chr8_3:57561821-57561840 | None:intergenic | 35.0% |
| ATGAAAGAGCAATGAATCTC+TGG | + | chr8_3:57561849-57561868 | None:intergenic | 35.0% | |
| !!! | TATAGTACCTTTTTGAGTCC+AGG | + | chr8_3:57561880-57561899 | None:intergenic | 35.0% |
| !!! | TTTTTTGTCAAGTAGCCTAG+TGG | - | chr8_3:57561943-57561962 | Msa1297350:CDS | 35.0% |
| ACAATTTGATTGTGGAGAAG+TGG | - | chr8_3:57561977-57561996 | Msa1297350:CDS | 35.0% | |
| GCATATTGCATGTTATATGC+AGG | + | chr8_3:57562027-57562046 | None:intergenic | 35.0% | |
| !! | CTTCAATTTTTGGGAGTGAT+TGG | + | chr8_3:57562374-57562393 | None:intergenic | 35.0% |
| ACTCCCAAAAATTGAAGCAA+GGG | - | chr8_3:57562377-57562396 | Msa1297350:intron | 35.0% | |
| ! | GAAACCCTTGCTTCAATTTT+TGG | + | chr8_3:57562384-57562403 | None:intergenic | 35.0% |
| AAAATTGAAGCAAGGGTTTC+TGG | - | chr8_3:57562384-57562403 | Msa1297350:intron | 35.0% | |
| ! | AGCACTTCTATTTTGCCATT+TGG | - | chr8_3:57562504-57562523 | Msa1297350:CDS | 35.0% |
| TGACAATAAAGGATCTCGTA+AGG | - | chr8_3:57562954-57562973 | Msa1297350:CDS | 35.0% | |
| ! | TGCATTCGAGTTTGATGATA+TGG | - | chr8_3:57561420-57561439 | Msa1297350:CDS | 35.0% |
| AGAATAAGTACTCTCTTGTG+GGG | + | chr8_3:57561470-57561489 | None:intergenic | 35.0% | |
| GAAGAATAAGTACTCTCTTG+TGG | + | chr8_3:57561472-57561491 | None:intergenic | 35.0% | |
| AGAATTGTTCTGTGTGCTTT+CGG | + | chr8_3:57561527-57561546 | None:intergenic | 35.0% | |
| TGATCAGGACTACTTTCAAT+GGG | + | chr8_3:57561553-57561572 | None:intergenic | 35.0% | |
| TTGATCAGGACTACTTTCAA+TGG | + | chr8_3:57561554-57561573 | None:intergenic | 35.0% | |
| !!! | AGTCTTAGTTTTGTTGGTGT+AGG | + | chr8_3:57561589-57561608 | None:intergenic | 35.0% |
| !!! | GACTTGAGTCTTAGTTTTGT+TGG | + | chr8_3:57561595-57561614 | None:intergenic | 35.0% |
| GGGTTCAAAAGAAATGATCT+TGG | + | chr8_3:57561641-57561660 | None:intergenic | 35.0% | |
| ! | CATTTCTTTTGAACCCAACA+TGG | - | chr8_3:57561645-57561664 | Msa1297350:intron | 35.0% |
| ! | TTTGGAAGTGTGATATCTCA+AGG | - | chr8_3:57561721-57561740 | Msa1297350:intron | 35.0% |
| TTATTGCCGAAAGAAAACGA+AGG | - | chr8_3:57561812-57561831 | Msa1297350:intron | 35.0% | |
| TATTGCCGAAAGAAAACGAA+GGG | - | chr8_3:57561813-57561832 | Msa1297350:intron | 35.0% | |
| ! | CTTTTCCCTTCGTTTTCTTT+CGG | + | chr8_3:57561821-57561840 | None:intergenic | 35.0% |
| ATGAAAGAGCAATGAATCTC+TGG | + | chr8_3:57561849-57561868 | None:intergenic | 35.0% | |
| !!! | TATAGTACCTTTTTGAGTCC+AGG | + | chr8_3:57561880-57561899 | None:intergenic | 35.0% |
| !!! | TTTTTTGTCAAGTAGCCTAG+TGG | - | chr8_3:57561943-57561962 | Msa1297350:CDS | 35.0% |
| ACAATTTGATTGTGGAGAAG+TGG | - | chr8_3:57561977-57561996 | Msa1297350:CDS | 35.0% | |
| GCATATTGCATGTTATATGC+AGG | + | chr8_3:57562027-57562046 | None:intergenic | 35.0% | |
| !! | CTTCAATTTTTGGGAGTGAT+TGG | + | chr8_3:57562374-57562393 | None:intergenic | 35.0% |
| ACTCCCAAAAATTGAAGCAA+GGG | - | chr8_3:57562377-57562396 | Msa1297350:intron | 35.0% | |
| ! | GAAACCCTTGCTTCAATTTT+TGG | + | chr8_3:57562384-57562403 | None:intergenic | 35.0% |
| AAAATTGAAGCAAGGGTTTC+TGG | - | chr8_3:57562384-57562403 | Msa1297350:intron | 35.0% | |
| ! | AGCACTTCTATTTTGCCATT+TGG | - | chr8_3:57562504-57562523 | Msa1297350:CDS | 35.0% |
| TGACAATAAAGGATCTCGTA+AGG | - | chr8_3:57562954-57562973 | Msa1297350:CDS | 35.0% | |
| CGAATGCATATGAGTCCATT+GGG | + | chr8_3:57561408-57561427 | None:intergenic | 40.0% | |
| TCGAATGCATATGAGTCCAT+TGG | + | chr8_3:57561409-57561428 | None:intergenic | 40.0% | |
| GATCAGGACTACTTTCAATG+GGG | + | chr8_3:57561552-57561571 | None:intergenic | 40.0% | |
| TTGAACCCAACATGGATACA+AGG | - | chr8_3:57561653-57561672 | Msa1297350:intron | 40.0% | |
| TGAACCCAACATGGATACAA+GGG | - | chr8_3:57561654-57561673 | Msa1297350:intron | 40.0% | |
| TTCACCCTTGTATCCATGTT+GGG | + | chr8_3:57561661-57561680 | None:intergenic | 40.0% | |
| AAGAAGCCTAAAACCGAGAT+TGG | - | chr8_3:57561679-57561698 | Msa1297350:intron | 40.0% | |
| AGAAGCCTAAAACCGAGATT+GGG | - | chr8_3:57561680-57561699 | Msa1297350:intron | 40.0% | |
| ! | GTTTTCTCCATACCCAATCT+CGG | + | chr8_3:57561695-57561714 | None:intergenic | 40.0% |
| CATGATCTTGAGCCTGAATA+GGG | + | chr8_3:57561792-57561811 | None:intergenic | 40.0% | |
| ACATGATCTTGAGCCTGAAT+AGG | + | chr8_3:57561793-57561812 | None:intergenic | 40.0% | |
| TCTTCTTCCTGGACTCAAAA+AGG | - | chr8_3:57561870-57561889 | Msa1297350:CDS | 40.0% | |
| TTGTGTGAGATTTAGCCACT+AGG | + | chr8_3:57561961-57561980 | None:intergenic | 40.0% | |
| ATGTTTACTTTGCCTGCAGA+TGG | - | chr8_3:57562179-57562198 | Msa1297350:intron | 40.0% | |
| ACAGGAAAGAGTGAAGACAT+TGG | - | chr8_3:57562248-57562267 | Msa1297350:intron | 40.0% | |
| ! | GTCTGAATTTTTGTCGCAAG+AGG | + | chr8_3:57562352-57562371 | None:intergenic | 40.0% |
| CACTCCCAAAAATTGAAGCA+AGG | - | chr8_3:57562376-57562395 | Msa1297350:intron | 40.0% | |
| ATCCATTGCGACAGATATTG+TGG | - | chr8_3:57562426-57562445 | Msa1297350:intron | 40.0% | |
| TACTCGGCACAAGAAAAACT+AGG | + | chr8_3:57562765-57562784 | None:intergenic | 40.0% | |
| CGAATGCATATGAGTCCATT+GGG | + | chr8_3:57561408-57561427 | None:intergenic | 40.0% | |
| TCGAATGCATATGAGTCCAT+TGG | + | chr8_3:57561409-57561428 | None:intergenic | 40.0% | |
| GATCAGGACTACTTTCAATG+GGG | + | chr8_3:57561552-57561571 | None:intergenic | 40.0% | |
| TTGAACCCAACATGGATACA+AGG | - | chr8_3:57561653-57561672 | Msa1297350:intron | 40.0% | |
| TGAACCCAACATGGATACAA+GGG | - | chr8_3:57561654-57561673 | Msa1297350:intron | 40.0% | |
| TTCACCCTTGTATCCATGTT+GGG | + | chr8_3:57561661-57561680 | None:intergenic | 40.0% | |
| AAGAAGCCTAAAACCGAGAT+TGG | - | chr8_3:57561679-57561698 | Msa1297350:intron | 40.0% | |
| AGAAGCCTAAAACCGAGATT+GGG | - | chr8_3:57561680-57561699 | Msa1297350:intron | 40.0% | |
| ! | GTTTTCTCCATACCCAATCT+CGG | + | chr8_3:57561695-57561714 | None:intergenic | 40.0% |
| CATGATCTTGAGCCTGAATA+GGG | + | chr8_3:57561792-57561811 | None:intergenic | 40.0% | |
| ACATGATCTTGAGCCTGAAT+AGG | + | chr8_3:57561793-57561812 | None:intergenic | 40.0% | |
| TCTTCTTCCTGGACTCAAAA+AGG | - | chr8_3:57561870-57561889 | Msa1297350:CDS | 40.0% | |
| TTGTGTGAGATTTAGCCACT+AGG | + | chr8_3:57561961-57561980 | None:intergenic | 40.0% | |
| ATGTTTACTTTGCCTGCAGA+TGG | - | chr8_3:57562179-57562198 | Msa1297350:intron | 40.0% | |
| ACAGGAAAGAGTGAAGACAT+TGG | - | chr8_3:57562248-57562267 | Msa1297350:intron | 40.0% | |
| ! | GTCTGAATTTTTGTCGCAAG+AGG | + | chr8_3:57562352-57562371 | None:intergenic | 40.0% |
| CACTCCCAAAAATTGAAGCA+AGG | - | chr8_3:57562376-57562395 | Msa1297350:intron | 40.0% | |
| ATCCATTGCGACAGATATTG+TGG | - | chr8_3:57562426-57562445 | Msa1297350:intron | 40.0% | |
| TACTCGGCACAAGAAAAACT+AGG | + | chr8_3:57562765-57562784 | None:intergenic | 40.0% | |
| TGTTCTGTGTGCTTTCGGAA+TGG | + | chr8_3:57561522-57561541 | None:intergenic | 45.0% | |
| GGTGAAGCAACAGATTGATC+AGG | + | chr8_3:57561568-57561587 | None:intergenic | 45.0% | |
| CTTCACCCTTGTATCCATGT+TGG | + | chr8_3:57561662-57561681 | None:intergenic | 45.0% | |
| ! | CCATACCCAATCTCGGTTTT+AGG | + | chr8_3:57561688-57561707 | None:intergenic | 45.0% |
| CCTAAAACCGAGATTGGGTA+TGG | - | chr8_3:57561685-57561704 | Msa1297350:intron | 45.0% | |
| GCTCTTTCATCTCTTCTTCC+TGG | - | chr8_3:57561859-57561878 | Msa1297350:CDS | 45.0% | |
| ! | TTGTGGAGAAGTGGAGTGTT+AGG | - | chr8_3:57561986-57562005 | Msa1297350:CDS | 45.0% |
| ! | TGTGGAGAAGTGGAGTGTTA+GGG | - | chr8_3:57561987-57562006 | Msa1297350:CDS | 45.0% |
| TTGCATGTTATATGCAGGGG+CGG | + | chr8_3:57562022-57562041 | None:intergenic | 45.0% | |
| GTTTATATCCCCGTGAGCTT+AGG | + | chr8_3:57562061-57562080 | None:intergenic | 45.0% | |
| ! | GATGGACAAGGCAACTGTTT+TGG | - | chr8_3:57562197-57562216 | Msa1297350:intron | 45.0% |
| GGAAAGAGTGAAGACATTGG+AGG | - | chr8_3:57562251-57562270 | Msa1297350:intron | 45.0% | |
| !! | TAGAAGTGCTCTGAACAGTG+AGG | + | chr8_3:57562494-57562513 | None:intergenic | 45.0% |
| ! | TCTCGTAAGGAGCATAAGTC+AGG | - | chr8_3:57562967-57562986 | Msa1297350:CDS | 45.0% |
| ! | GGAGCATAAGTCAGGTTTTG+AGG | - | chr8_3:57562975-57562994 | Msa1297350:CDS | 45.0% |
| TGTTCTGTGTGCTTTCGGAA+TGG | + | chr8_3:57561522-57561541 | None:intergenic | 45.0% | |
| GGTGAAGCAACAGATTGATC+AGG | + | chr8_3:57561568-57561587 | None:intergenic | 45.0% | |
| CTTCACCCTTGTATCCATGT+TGG | + | chr8_3:57561662-57561681 | None:intergenic | 45.0% | |
| ! | CCATACCCAATCTCGGTTTT+AGG | + | chr8_3:57561688-57561707 | None:intergenic | 45.0% |
| CCTAAAACCGAGATTGGGTA+TGG | - | chr8_3:57561685-57561704 | Msa1297350:intron | 45.0% | |
| GCTCTTTCATCTCTTCTTCC+TGG | - | chr8_3:57561859-57561878 | Msa1297350:CDS | 45.0% | |
| ! | TTGTGGAGAAGTGGAGTGTT+AGG | - | chr8_3:57561986-57562005 | Msa1297350:CDS | 45.0% |
| ! | TGTGGAGAAGTGGAGTGTTA+GGG | - | chr8_3:57561987-57562006 | Msa1297350:CDS | 45.0% |
| TTGCATGTTATATGCAGGGG+CGG | + | chr8_3:57562022-57562041 | None:intergenic | 45.0% | |
| GTTTATATCCCCGTGAGCTT+AGG | + | chr8_3:57562061-57562080 | None:intergenic | 45.0% | |
| ! | GATGGACAAGGCAACTGTTT+TGG | - | chr8_3:57562197-57562216 | Msa1297350:intron | 45.0% |
| GGAAAGAGTGAAGACATTGG+AGG | - | chr8_3:57562251-57562270 | Msa1297350:intron | 45.0% | |
| !! | TAGAAGTGCTCTGAACAGTG+AGG | + | chr8_3:57562494-57562513 | None:intergenic | 45.0% |
| ! | TCTCGTAAGGAGCATAAGTC+AGG | - | chr8_3:57562967-57562986 | Msa1297350:CDS | 45.0% |
| ! | GGAGCATAAGTCAGGTTTTG+AGG | - | chr8_3:57562975-57562994 | Msa1297350:CDS | 45.0% |
| ! | GTGGAGAAGTGGAGTGTTAG+GGG | - | chr8_3:57561988-57562007 | Msa1297350:CDS | 50.0% |
| TGCATGTTATATGCAGGGGC+GGG | + | chr8_3:57562021-57562040 | None:intergenic | 50.0% | |
| TCCCAACTGACCTAAGCTCA+CGG | - | chr8_3:57562048-57562067 | Msa1297350:CDS | 50.0% | |
| ACTTTGCCTGCAGATGGACA+AGG | - | chr8_3:57562185-57562204 | Msa1297350:intron | 50.0% | |
| GGCCACAATATCTGTCGCAA+TGG | + | chr8_3:57562431-57562450 | None:intergenic | 50.0% | |
| ! | TGAGTATTGCGGTCGCAGAT+CGG | + | chr8_3:57562452-57562471 | None:intergenic | 50.0% |
| ! | GTGGAGAAGTGGAGTGTTAG+GGG | - | chr8_3:57561988-57562007 | Msa1297350:CDS | 50.0% |
| TGCATGTTATATGCAGGGGC+GGG | + | chr8_3:57562021-57562040 | None:intergenic | 50.0% | |
| TCCCAACTGACCTAAGCTCA+CGG | - | chr8_3:57562048-57562067 | Msa1297350:CDS | 50.0% | |
| ACTTTGCCTGCAGATGGACA+AGG | - | chr8_3:57562185-57562204 | Msa1297350:intron | 50.0% | |
| GGCCACAATATCTGTCGCAA+TGG | + | chr8_3:57562431-57562450 | None:intergenic | 50.0% | |
| ! | TGAGTATTGCGGTCGCAGAT+CGG | + | chr8_3:57562452-57562471 | None:intergenic | 50.0% |
| GCATGTTATATGCAGGGGCG+GGG | + | chr8_3:57562020-57562039 | None:intergenic | 55.0% | |
| GTGAGCTTAGGTCAGTTGGG+AGG | + | chr8_3:57562049-57562068 | None:intergenic | 55.0% | |
| CCCGTGAGCTTAGGTCAGTT+GGG | + | chr8_3:57562052-57562071 | None:intergenic | 55.0% | |
| CCCAACTGACCTAAGCTCAC+GGG | - | chr8_3:57562049-57562068 | Msa1297350:CDS | 55.0% | |
| CCAACTGACCTAAGCTCACG+GGG | - | chr8_3:57562050-57562069 | Msa1297350:CDS | 55.0% | |
| CAGTTGCCTTGTCCATCTGC+AGG | + | chr8_3:57562194-57562213 | None:intergenic | 55.0% | |
| GCATGTTATATGCAGGGGCG+GGG | + | chr8_3:57562020-57562039 | None:intergenic | 55.0% | |
| GTGAGCTTAGGTCAGTTGGG+AGG | + | chr8_3:57562049-57562068 | None:intergenic | 55.0% | |
| CCCGTGAGCTTAGGTCAGTT+GGG | + | chr8_3:57562052-57562071 | None:intergenic | 55.0% | |
| CCCAACTGACCTAAGCTCAC+GGG | - | chr8_3:57562049-57562068 | Msa1297350:CDS | 55.0% | |
| CCAACTGACCTAAGCTCACG+GGG | - | chr8_3:57562050-57562069 | Msa1297350:CDS | 55.0% | |
| CAGTTGCCTTGTCCATCTGC+AGG | + | chr8_3:57562194-57562213 | None:intergenic | 55.0% | |
| CCCCGTGAGCTTAGGTCAGT+TGG | + | chr8_3:57562053-57562072 | None:intergenic | 60.0% | |
| CCCCGTGAGCTTAGGTCAGT+TGG | + | chr8_3:57562053-57562072 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 57561370 | 57563009 | 57561370 | ID=Msa1297350;Name=Msa1297350 |
| chr8_3 | mRNA | 57561370 | 57563009 | 57561370 | ID=Msa1297350-mRNA-1;Parent=Msa1297350;Name=Msa1297350-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.5|0|1|1|1|3|0|319 |
| chr8_3 | exon | 57562488 | 57563009 | 57562488 | ID=Msa1297350-mRNA-1:exon:16509;Parent=Msa1297350-mRNA-1 |
| chr8_3 | exon | 57561819 | 57562181 | 57561819 | ID=Msa1297350-mRNA-1:exon:16508;Parent=Msa1297350-mRNA-1 |
| chr8_3 | exon | 57561370 | 57561444 | 57561370 | ID=Msa1297350-mRNA-1:exon:16507;Parent=Msa1297350-mRNA-1 |
| chr8_3 | CDS | 57562488 | 57563009 | 57562488 | ID=Msa1297350-mRNA-1:cds;Parent=Msa1297350-mRNA-1 |
| chr8_3 | CDS | 57561819 | 57562181 | 57561819 | ID=Msa1297350-mRNA-1:cds;Parent=Msa1297350-mRNA-1 |
| chr8_3 | CDS | 57561370 | 57561444 | 57561370 | ID=Msa1297350-mRNA-1:cds;Parent=Msa1297350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
