Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297360 | XP_003608592.1 | 88.955 | 335 | 30 | 3 | 1 | 335 | 1 | 328 | 0.0 | 605 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297360 | sp|Q1PF16|BH019_ARATH | 50.000 | 180 | 82 | 5 | 155 | 327 | 112 | 290 | 3.73e-50 | 172 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297360 | G7JGD6 | 88.955 | 335 | 30 | 3 | 1 | 335 | 1 | 328 | 0.0 | 605 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1297360 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0710810 | Msa1297360 | 0.812192 | 4.798277e-51 | -8.615850e-47 |
| Msa1297360 | Msa1340610 | 0.852280 | 5.120003e-61 | -8.615850e-47 |
| Msa1133360 | Msa1297360 | 0.964828 | 8.046508e-124 | -8.615850e-47 |
| Msa0881750 | Msa1297360 | 0.807261 | 5.509484e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297360 | MtrunA17_Chr4g0054561 | 88.955 | 335 | 30 | 3 | 1 | 335 | 1 | 328 | 0.0 | 605 |
| Msa1297360 | MtrunA17_Chr4g0054551 | 86.866 | 335 | 37 | 3 | 1 | 335 | 1 | 328 | 0.0 | 593 |
| Msa1297360 | MtrunA17_Chr5g0400671 | 45.042 | 353 | 141 | 11 | 1 | 331 | 1 | 322 | 2.13e-81 | 250 |
| Msa1297360 | MtrunA17_Chr2g0280161 | 38.310 | 355 | 176 | 12 | 2 | 327 | 5 | 345 | 1.06e-57 | 190 |
| Msa1297360 | MtrunA17_Chr4g0049331 | 46.473 | 241 | 117 | 8 | 100 | 335 | 77 | 310 | 1.57e-52 | 175 |
| Msa1297360 | MtrunA17_Chr8g0336681 | 46.809 | 188 | 87 | 4 | 155 | 331 | 149 | 334 | 4.71e-50 | 170 |
| Msa1297360 | MtrunA17_Chr5g0400661 | 37.143 | 315 | 151 | 12 | 43 | 331 | 40 | 333 | 4.84e-48 | 164 |
| Msa1297360 | MtrunA17_Chr2g0333621 | 47.396 | 192 | 94 | 3 | 145 | 331 | 121 | 310 | 6.61e-47 | 161 |
| Msa1297360 | MtrunA17_Chr6g0468491 | 36.897 | 290 | 153 | 7 | 42 | 327 | 41 | 304 | 1.47e-46 | 160 |
| Msa1297360 | MtrunA17_Chr4g0054581 | 42.920 | 226 | 102 | 7 | 111 | 327 | 162 | 369 | 1.86e-45 | 159 |
| Msa1297360 | MtrunA17_Chr4g0033391 | 43.062 | 209 | 100 | 5 | 130 | 335 | 127 | 319 | 2.13e-43 | 152 |
| Msa1297360 | MtrunA17_Chr4g0002781 | 40.784 | 255 | 111 | 10 | 98 | 331 | 113 | 348 | 3.39e-43 | 152 |
| Msa1297360 | MtrunA17_Chr2g0307131 | 47.368 | 171 | 86 | 2 | 160 | 327 | 177 | 346 | 8.51e-43 | 151 |
| Msa1297360 | MtrunA17_Chr4g0002801 | 40.816 | 245 | 121 | 7 | 98 | 331 | 98 | 329 | 1.34e-42 | 150 |
| Msa1297360 | MtrunA17_Chr2g0307141 | 46.199 | 171 | 88 | 2 | 160 | 327 | 181 | 350 | 1.62e-42 | 150 |
| Msa1297360 | MtrunA17_Chr5g0400621 | 50.000 | 170 | 81 | 2 | 161 | 327 | 156 | 324 | 2.48e-42 | 149 |
| Msa1297360 | MtrunA17_Chr4g0033291 | 42.995 | 207 | 109 | 4 | 130 | 331 | 121 | 323 | 3.41e-42 | 149 |
| Msa1297360 | MtrunA17_Chr7g0225901 | 41.475 | 217 | 112 | 6 | 99 | 312 | 36 | 240 | 1.25e-41 | 145 |
| Msa1297360 | MtrunA17_Chr2g0333641 | 43.085 | 188 | 105 | 2 | 145 | 331 | 120 | 306 | 6.20e-39 | 140 |
| Msa1297360 | MtrunA17_Chr4g0054621 | 41.989 | 181 | 100 | 2 | 147 | 327 | 157 | 332 | 1.33e-38 | 140 |
| Msa1297360 | MtrunA17_Chr5g0400641 | 44.099 | 161 | 78 | 4 | 165 | 318 | 1 | 156 | 1.15e-37 | 132 |
| Msa1297360 | MtrunA17_Chr4g0054571 | 47.059 | 187 | 78 | 6 | 162 | 333 | 150 | 330 | 1.92e-37 | 136 |
| Msa1297360 | MtrunA17_Chr4g0033281 | 41.379 | 203 | 109 | 5 | 130 | 327 | 119 | 316 | 5.24e-36 | 132 |
| Msa1297360 | MtrunA17_Chr7g0249811 | 44.134 | 179 | 93 | 2 | 153 | 331 | 156 | 327 | 1.29e-35 | 132 |
| Msa1297360 | MtrunA17_Chr2g0333611 | 39.674 | 184 | 97 | 6 | 155 | 331 | 38 | 214 | 6.08e-35 | 127 |
| Msa1297360 | MtrunA17_Chr2g0333541 | 41.622 | 185 | 94 | 6 | 155 | 330 | 87 | 266 | 7.74e-31 | 117 |
| Msa1297360 | MtrunA17_Chr6g0468461 | 40.645 | 155 | 80 | 2 | 158 | 312 | 169 | 311 | 6.27e-28 | 111 |
| Msa1297360 | MtrunA17_Chr4g0002831 | 36.250 | 160 | 92 | 5 | 173 | 331 | 53 | 203 | 2.35e-20 | 87.8 |
| Msa1297360 | MtrunA17_Chr7g0233441 | 36.646 | 161 | 89 | 5 | 167 | 327 | 44 | 191 | 2.42e-20 | 87.4 |
| Msa1297360 | MtrunA17_Chr4g0002851 | 34.375 | 160 | 78 | 4 | 173 | 327 | 54 | 191 | 3.12e-19 | 84.3 |
| Msa1297360 | MtrunA17_Chr8g0346161 | 30.000 | 180 | 108 | 6 | 162 | 329 | 291 | 464 | 3.39e-16 | 79.3 |
| Msa1297360 | MtrunA17_Chr1g0185621 | 50.000 | 64 | 30 | 1 | 162 | 225 | 475 | 536 | 6.76e-14 | 72.8 |
| Msa1297360 | MtrunA17_Chr8g0346151 | 27.950 | 161 | 101 | 4 | 145 | 296 | 265 | 419 | 9.66e-14 | 71.6 |
| Msa1297360 | MtrunA17_Chr7g0260841 | 46.250 | 80 | 38 | 2 | 145 | 222 | 341 | 417 | 1.61e-13 | 71.2 |
| Msa1297360 | MtrunA17_Chr8g0366751 | 31.928 | 166 | 95 | 5 | 145 | 296 | 448 | 609 | 1.14e-12 | 68.9 |
| Msa1297360 | MtrunA17_Chr5g0411341 | 30.909 | 165 | 93 | 5 | 145 | 291 | 479 | 640 | 1.57e-12 | 68.6 |
| Msa1297360 | MtrunA17_Chr7g0275821 | 50.000 | 56 | 28 | 0 | 162 | 217 | 252 | 307 | 2.92e-12 | 67.0 |
| Msa1297360 | MtrunA17_Chr8g0386921 | 41.791 | 67 | 39 | 0 | 159 | 225 | 403 | 469 | 9.92e-12 | 65.9 |
| Msa1297360 | MtrunA17_Chr8g0365711 | 28.571 | 175 | 110 | 5 | 147 | 309 | 227 | 398 | 2.36e-11 | 64.3 |
| Msa1297360 | MtrunA17_Chr3g0131691 | 32.824 | 131 | 74 | 4 | 103 | 233 | 253 | 369 | 5.21e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297360 | AT2G22760.1 | 50.000 | 180 | 82 | 5 | 155 | 327 | 112 | 290 | 3.80e-51 | 172 |
| Msa1297360 | AT4G37850.2 | 49.733 | 187 | 87 | 4 | 154 | 335 | 144 | 328 | 5.60e-50 | 169 |
| Msa1297360 | AT4G37850.1 | 49.733 | 187 | 87 | 4 | 154 | 335 | 144 | 328 | 5.60e-50 | 169 |
| Msa1297360 | AT2G22760.2 | 50.000 | 164 | 75 | 4 | 155 | 312 | 112 | 274 | 5.09e-46 | 158 |
| Msa1297360 | AT2G22770.1 | 43.694 | 222 | 103 | 5 | 131 | 331 | 98 | 318 | 8.34e-43 | 150 |
| Msa1297360 | AT2G22750.2 | 41.736 | 242 | 120 | 7 | 99 | 328 | 66 | 298 | 9.63e-42 | 147 |
| Msa1297360 | AT2G22750.3 | 41.736 | 242 | 120 | 7 | 99 | 328 | 94 | 326 | 1.27e-41 | 148 |
| Msa1297360 | AT2G22750.5 | 41.736 | 242 | 120 | 7 | 99 | 328 | 90 | 322 | 1.39e-41 | 147 |
| Msa1297360 | AT2G22750.1 | 41.736 | 242 | 119 | 8 | 99 | 328 | 66 | 297 | 2.42e-40 | 144 |
| Msa1297360 | AT2G22750.4 | 41.736 | 242 | 119 | 8 | 99 | 328 | 94 | 325 | 3.31e-40 | 144 |
| Msa1297360 | AT1G32640.1 | 35.897 | 156 | 87 | 6 | 145 | 291 | 438 | 589 | 3.21e-16 | 80.1 |
| Msa1297360 | AT2G46510.1 | 47.561 | 82 | 40 | 1 | 136 | 217 | 372 | 450 | 4.35e-15 | 76.6 |
| Msa1297360 | AT5G46760.1 | 31.481 | 162 | 94 | 5 | 145 | 296 | 401 | 555 | 2.38e-12 | 68.2 |
| Msa1297360 | AT1G01260.1 | 49.153 | 59 | 30 | 0 | 159 | 217 | 430 | 488 | 2.80e-12 | 68.2 |
| Msa1297360 | AT1G01260.2 | 49.153 | 59 | 30 | 0 | 159 | 217 | 430 | 488 | 2.80e-12 | 68.2 |
| Msa1297360 | AT1G01260.3 | 49.153 | 59 | 30 | 0 | 159 | 217 | 430 | 488 | 2.80e-12 | 68.2 |
| Msa1297360 | AT4G17880.1 | 31.447 | 159 | 94 | 5 | 145 | 296 | 402 | 552 | 4.56e-12 | 67.4 |
| Msa1297360 | AT4G09820.1 | 27.933 | 179 | 105 | 5 | 155 | 331 | 356 | 512 | 5.78e-12 | 67.0 |
| Msa1297360 | AT1G63650.3 | 44.068 | 59 | 33 | 0 | 157 | 215 | 400 | 458 | 1.46e-11 | 65.9 |
| Msa1297360 | AT1G63650.1 | 44.068 | 59 | 33 | 0 | 157 | 215 | 400 | 458 | 1.46e-11 | 65.9 |
| Msa1297360 | AT1G63650.2 | 44.068 | 59 | 33 | 0 | 157 | 215 | 400 | 458 | 1.46e-11 | 65.9 |
| Msa1297360 | AT4G16430.1 | 34.043 | 141 | 74 | 5 | 85 | 217 | 246 | 375 | 1.62e-11 | 65.5 |
| Msa1297360 | AT1G12860.1 | 29.518 | 166 | 101 | 6 | 163 | 316 | 268 | 429 | 2.40e-11 | 65.1 |
| Msa1297360 | AT4G29930.4 | 39.394 | 66 | 40 | 0 | 163 | 228 | 55 | 120 | 5.45e-11 | 61.2 |
| Msa1297360 | AT4G29930.5 | 39.394 | 66 | 40 | 0 | 163 | 228 | 55 | 120 | 6.51e-11 | 62.0 |
| Msa1297360 | AT4G29930.2 | 39.394 | 66 | 40 | 0 | 163 | 228 | 55 | 120 | 6.97e-11 | 62.0 |
| Msa1297360 | AT4G29930.3 | 39.394 | 66 | 40 | 0 | 163 | 228 | 55 | 120 | 7.52e-11 | 62.4 |
| Msa1297360 | AT4G29930.7 | 39.394 | 66 | 40 | 0 | 163 | 228 | 55 | 120 | 7.52e-11 | 62.4 |
| Msa1297360 | AT4G29930.6 | 39.394 | 66 | 40 | 0 | 163 | 228 | 55 | 120 | 7.52e-11 | 61.6 |
| Msa1297360 | AT4G29930.1 | 39.394 | 66 | 40 | 0 | 163 | 228 | 55 | 120 | 8.30e-11 | 62.0 |
Find 70 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATCAAATGAAATGATTT+TGG | 0.105789 | 8_3:+57578660 | None:intergenic |
| TGCATTTCAGTTTGATGATA+TGG | 0.178721 | 8_3:-57578863 | Msa1297360:CDS |
| GATGGACAAGGCAACTATTT+TGG | 0.186609 | 8_3:-57578212 | Msa1297360:CDS |
| TACGGAGAAAACTTGAATTT+TGG | 0.226888 | 8_3:-57578577 | Msa1297360:CDS |
| TTTGAATTAACAGGGATTAA+TGG | 0.241351 | 8_3:-57578932 | Msa1297360:intron |
| GCTCTTTCCTCCATTCTTCC+TGG | 0.259749 | 8_3:-57578421 | Msa1297360:CDS |
| AAAATCGAAGCAAGAGTTTC+TGG | 0.260282 | 8_3:-57578025 | Msa1297360:CDS |
| CATTCTTCCTGGACTGAAAA+AGG | 0.273836 | 8_3:-57578410 | Msa1297360:intron |
| TGCCTTGAAACTGGTTGTTT+TGG | 0.285314 | 8_3:+57577668 | None:intergenic |
| GGCCGCAATACTCAACTTAT+TGG | 0.296853 | 8_3:-57577951 | Msa1297360:CDS |
| GGAATATTGCTTAACAATAA+AGG | 0.354244 | 8_3:-57577736 | Msa1297360:CDS |
| TGTAAATAGAAACCCTATTC+AGG | 0.354615 | 8_3:-57578503 | Msa1297360:CDS |
| TGTTGTGTACTTACGAATTC+AGG | 0.356450 | 8_3:+57579053 | None:intergenic |
| ACATGATCTTGAGCCTGAAT+AGG | 0.366395 | 8_3:+57578490 | None:intergenic |
| CATGATCTTGAGCCTGAATA+GGG | 0.371001 | 8_3:+57578491 | None:intergenic |
| TCAGGTTTGAATTCCTTGTA+TGG | 0.379369 | 8_3:+57579109 | None:intergenic |
| TCGCTTGTTGTTGATGTTGT+TGG | 0.394714 | 8_3:+57578786 | None:intergenic |
| ATCCAAAACAACCAGTTTCA+AGG | 0.398170 | 8_3:-57577670 | Msa1297360:three_prime_UTR |
| TGATCTGGACTACTTTCAAT+GGG | 0.422677 | 8_3:+57578730 | None:intergenic |
| GGAACAAGTAGCCGATAAAA+AGG | 0.423518 | 8_3:-57578137 | Msa1297360:CDS |
| TGATATAACCATTGTTGCTC+AGG | 0.429067 | 8_3:-57577870 | Msa1297360:intron |
| GTCCATCATTTGGATTATTG+AGG | 0.431350 | 8_3:-57577562 | Msa1297360:three_prime_UTR |
| TTGATCTGGACTACTTTCAA+TGG | 0.434031 | 8_3:+57578729 | None:intergenic |
| ATATGTTGATGCCTTGAAAC+TGG | 0.446911 | 8_3:+57577659 | None:intergenic |
| TGTTCTGTGGGCTTTCAGAA+TGG | 0.448273 | 8_3:+57578761 | None:intergenic |
| TACGAATTCAGGCATGTACT+TGG | 0.466492 | 8_3:+57579064 | None:intergenic |
| TCAAGATAGTTATTTCCAAA+TGG | 0.476177 | 8_3:+57577890 | None:intergenic |
| TACCTCAATAATCCAAATGA+TGG | 0.476825 | 8_3:+57577560 | None:intergenic |
| AGGAAAGAGCAATGAATCTC+TGG | 0.478665 | 8_3:+57578434 | None:intergenic |
| TCACTATGATATTAAAACTA+AGG | 0.485420 | 8_3:+57577610 | None:intergenic |
| GCCTTGAGTACTTTAGTTGG+CGG | 0.485847 | 8_3:+57578688 | None:intergenic |
| GAAGCCTTGAGTACTTTAGT+TGG | 0.494828 | 8_3:+57578685 | None:intergenic |
| TAATGATTATGAGTACCCTA+TGG | 0.498020 | 8_3:-57578893 | Msa1297360:CDS |
| AAGAAGCCTAAAACCGAGAT+CGG | 0.501691 | 8_3:-57578601 | Msa1297360:CDS |
| CAGGTTTGAATTCCTTGTAT+GGG | 0.504261 | 8_3:+57579110 | None:intergenic |
| AGGAATAAGTACTCTCTTGT+GGG | 0.507070 | 8_3:+57578815 | None:intergenic |
| GCTGAGACAACAGATTGATC+TGG | 0.515599 | 8_3:+57578715 | None:intergenic |
| CCTAAAACCGAGATCGGGTA+CGG | 0.516391 | 8_3:-57578595 | Msa1297360:CDS |
| GGAACGAGTGAAGACATTAG+AGG | 0.517587 | 8_3:-57578158 | Msa1297360:CDS |
| TCAGGCTCAAGATCATGTTA+TGG | 0.518678 | 8_3:-57578485 | Msa1297360:CDS |
| TCTATTCTCTTCGACGATGA+TGG | 0.521622 | 8_3:-57578088 | Msa1297360:CDS |
| TTCGTCCCTCTTTCACGTTG+TGG | 0.523361 | 8_3:-57577385 | Msa1297360:three_prime_UTR |
| TGAAATGCAGATGAATCCAT+AGG | 0.526233 | 8_3:+57578877 | None:intergenic |
| CAATCTCCACAACGTGAAAG+AGG | 0.528573 | 8_3:+57577379 | None:intergenic |
| TCTCGTAAGAAGCATAAGTC+AGG | 0.535454 | 8_3:-57577712 | Msa1297360:CDS |
| TAAACATATGAAGCAACTAA+AGG | 0.541156 | 8_3:-57578179 | Msa1297360:CDS |
| GTTGATGTTGTTGGTATGAG+AGG | 0.543066 | 8_3:+57578795 | None:intergenic |
| GAGGAATAAGTACTCTCTTG+TGG | 0.546666 | 8_3:+57578814 | None:intergenic |
| TTTGGAAGTGTGATATCTCA+AGG | 0.551675 | 8_3:-57578559 | Msa1297360:CDS |
| TTCCAATAAGTTGAGTATTG+CGG | 0.565334 | 8_3:+57577949 | None:intergenic |
| TGGGGAAAGAACTGTTCTGT+GGG | 0.565404 | 8_3:+57578749 | None:intergenic |
| AGAAGCCTAAAACCGAGATC+GGG | 0.567677 | 8_3:-57578600 | Msa1297360:CDS |
| TGAGTATTGCGGCCGCAGAT+CGG | 0.574788 | 8_3:+57577960 | None:intergenic |
| AACATATGATAATAATGCCA+AGG | 0.589046 | 8_3:-57577517 | Msa1297360:three_prime_UTR |
| ACCGCCAACTAAAGTACTCA+AGG | 0.590049 | 8_3:-57578689 | Msa1297360:CDS |
| ATGGGGAAAGAACTGTTCTG+TGG | 0.590789 | 8_3:+57578748 | None:intergenic |
| GAAATGCAGATGAATCCATA+GGG | 0.600361 | 8_3:+57578878 | None:intergenic |
| GAATTAACAGGGATTAATGG+AGG | 0.608513 | 8_3:-57578929 | Msa1297360:intron |
| GACATGCTCATCAGAATCCA+CGG | 0.608624 | 8_3:-57577998 | Msa1297360:CDS |
| TTATTATAAACGAGAGAACA+AGG | 0.617033 | 8_3:-57578533 | Msa1297360:CDS |
| GGCCGCAATGTTTATCACCG+TGG | 0.620508 | 8_3:+57577981 | None:intergenic |
| AATCTCCACAACGTGAAAGA+GGG | 0.623967 | 8_3:+57577380 | None:intergenic |
| TAAACATTGCGGCCGATCTG+CGG | 0.633204 | 8_3:-57577972 | Msa1297360:CDS |
| GGAATAAGTACTCTCTTGTG+GGG | 0.633544 | 8_3:+57578816 | None:intergenic |
| TTTCAGTCCAGGAAGAATGG+AGG | 0.639981 | 8_3:+57578414 | None:intergenic |
| ACTTTGCATGCAGATGGACA+AGG | 0.646531 | 8_3:-57578224 | Msa1297360:intron |
| TATGGCCGAAAGAAGACGAA+GGG | 0.657033 | 8_3:-57578467 | Msa1297360:CDS |
| TTATGGCCGAAAGAAGACGA+AGG | 0.705183 | 8_3:-57578468 | Msa1297360:CDS |
| GATCTGGACTACTTTCAATG+GGG | 0.710553 | 8_3:+57578731 | None:intergenic |
| ATCCACGGTGATAAACATTG+CGG | 0.719186 | 8_3:-57577983 | Msa1297360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATCTTTTTTCCAATTTT+TGG | - | chr8_3:57577424-57577443 | Msa1297360:three_prime_UTR | 15.0% |
| !!! | TAATTTTGATTTCCAAAAAT+TGG | + | chr8_3:57577439-57577458 | None:intergenic | 15.0% |
| !! | ATTAAGAAGTAAAAACAATT+AGG | + | chr8_3:57577481-57577500 | None:intergenic | 15.0% |
| !!! | TTATCAAATGAAATGATTTT+GGG | + | chr8_3:57577965-57577984 | None:intergenic | 15.0% |
| !!! | ATTATCAAATGAAATGATTT+TGG | + | chr8_3:57577966-57577985 | None:intergenic | 15.0% |
| !! | AGAAAATTTACATACTAATT+AGG | - | chr8_3:57578315-57578334 | Msa1297360:intron | 15.0% |
| !!! | CTTTTTCCATTTTTTTTTTT+TGG | - | chr8_3:57579039-57579058 | Msa1297360:intron | 15.0% |
| !!! | TTAATCTTTTTTCCAATTTT+TGG | - | chr8_3:57577424-57577443 | Msa1297360:three_prime_UTR | 15.0% |
| !!! | TAATTTTGATTTCCAAAAAT+TGG | + | chr8_3:57577439-57577458 | None:intergenic | 15.0% |
| !! | ATTAAGAAGTAAAAACAATT+AGG | + | chr8_3:57577481-57577500 | None:intergenic | 15.0% |
| !!! | TTATCAAATGAAATGATTTT+GGG | + | chr8_3:57577965-57577984 | None:intergenic | 15.0% |
| !!! | ATTATCAAATGAAATGATTT+TGG | + | chr8_3:57577966-57577985 | None:intergenic | 15.0% |
| !! | AGAAAATTTACATACTAATT+AGG | - | chr8_3:57578315-57578334 | Msa1297360:intron | 15.0% |
| !!! | CTTTTTCCATTTTTTTTTTT+TGG | - | chr8_3:57579039-57579058 | Msa1297360:intron | 15.0% |
| !! | GAAATCAAAATTAAAGAGTT+TGG | - | chr8_3:57577446-57577465 | Msa1297360:three_prime_UTR | 20.0% |
| !!! | ATTAAAGAGTTTGGTTTAAT+TGG | - | chr8_3:57577455-57577474 | Msa1297360:three_prime_UTR | 20.0% |
| !! | TAATTCAAAGAAAAAGAGTA+AGG | + | chr8_3:57577680-57577699 | None:intergenic | 20.0% |
| !!! | TCTTTTTCTTTGAATTAACA+GGG | - | chr8_3:57577683-57577702 | Msa1297360:exon | 20.0% |
| !! | AAATATTATGCATTTGAATG+TGG | - | chr8_3:57578258-57578277 | Msa1297360:intron | 20.0% |
| !! | AATATTATGCATTTGAATGT+GGG | - | chr8_3:57578259-57578278 | Msa1297360:intron | 20.0% |
| !! | TCACTATGATATTAAAACTA+AGG | + | chr8_3:57579016-57579035 | None:intergenic | 20.0% |
| !! | GAAATCAAAATTAAAGAGTT+TGG | - | chr8_3:57577446-57577465 | Msa1297360:three_prime_UTR | 20.0% |
| !!! | ATTAAAGAGTTTGGTTTAAT+TGG | - | chr8_3:57577455-57577474 | Msa1297360:three_prime_UTR | 20.0% |
| !! | TAATTCAAAGAAAAAGAGTA+AGG | + | chr8_3:57577680-57577699 | None:intergenic | 20.0% |
| !!! | TCTTTTTCTTTGAATTAACA+GGG | - | chr8_3:57577683-57577702 | Msa1297360:exon | 20.0% |
| !! | AAATATTATGCATTTGAATG+TGG | - | chr8_3:57578258-57578277 | Msa1297360:intron | 20.0% |
| !! | AATATTATGCATTTGAATGT+GGG | - | chr8_3:57578259-57578278 | Msa1297360:intron | 20.0% |
| !! | TCACTATGATATTAAAACTA+AGG | + | chr8_3:57579016-57579035 | None:intergenic | 20.0% |
| !!! | AATCTACTTTTCTTCAACTA+AGG | - | chr8_3:57577351-57577370 | Msa1297360:three_prime_UTR | 25.0% |
| ! | TCTAAACTATTGGATATATG+AGG | + | chr8_3:57577384-57577403 | None:intergenic | 25.0% |
| ! | AAATGCAAAGTCTAAACTAT+TGG | + | chr8_3:57577394-57577413 | None:intergenic | 25.0% |
| !! | GTTTAGACTTTGCATTTTAT+AGG | - | chr8_3:57577397-57577416 | Msa1297360:three_prime_UTR | 25.0% |
| !!! | CGAAATTTGAATCATTTTTC+AGG | + | chr8_3:57577535-57577554 | None:intergenic | 25.0% |
| !! | CTCTTTTTCTTTGAATTAAC+AGG | - | chr8_3:57577682-57577701 | Msa1297360:exon | 25.0% |
| ! | TTTGAATTAACAGGGATTAA+TGG | - | chr8_3:57577691-57577710 | Msa1297360:exon | 25.0% |
| !! | TTCTCAACAATTTTACAACA+TGG | - | chr8_3:57577988-57578007 | Msa1297360:CDS | 25.0% |
| ! | TTATTATAAACGAGAGAACA+AGG | - | chr8_3:57578090-57578109 | Msa1297360:CDS | 25.0% |
| ! | TGGTTAATATTACTTGATAG+AGG | + | chr8_3:57578373-57578392 | None:intergenic | 25.0% |
| ! | TAAACATATGAAGCAACTAA+AGG | - | chr8_3:57578444-57578463 | Msa1297360:CDS | 25.0% |
| !!! | AGTAGTTCTATTTTACCATT+TGG | - | chr8_3:57578718-57578737 | Msa1297360:CDS | 25.0% |
| !! | TCAAGATAGTTATTTCCAAA+TGG | + | chr8_3:57578736-57578755 | None:intergenic | 25.0% |
| !!! | TTTTTTCTTGCAGATGAATA+AGG | - | chr8_3:57578866-57578885 | Msa1297360:CDS | 25.0% |
| ! | GGAATATTGCTTAACAATAA+AGG | - | chr8_3:57578887-57578906 | Msa1297360:CDS | 25.0% |
| ! | GATGGACCAAAAAAAAAAAA+TGG | + | chr8_3:57579048-57579067 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTGGTCCATCATT+TGG | - | chr8_3:57579051-57579070 | Msa1297360:intron | 25.0% |
| ! | AACATATGATAATAATGCCA+AGG | - | chr8_3:57579106-57579125 | Msa1297360:five_prime_UTR | 25.0% |
| !!! | TTTTCTTGTTTTTTGCACAA+TGG | - | chr8_3:57579131-57579150 | Msa1297360:intron | 25.0% |
| !!! | AATCTACTTTTCTTCAACTA+AGG | - | chr8_3:57577351-57577370 | Msa1297360:three_prime_UTR | 25.0% |
| ! | TCTAAACTATTGGATATATG+AGG | + | chr8_3:57577384-57577403 | None:intergenic | 25.0% |
| ! | AAATGCAAAGTCTAAACTAT+TGG | + | chr8_3:57577394-57577413 | None:intergenic | 25.0% |
| !! | GTTTAGACTTTGCATTTTAT+AGG | - | chr8_3:57577397-57577416 | Msa1297360:three_prime_UTR | 25.0% |
| !!! | CGAAATTTGAATCATTTTTC+AGG | + | chr8_3:57577535-57577554 | None:intergenic | 25.0% |
| !! | CTCTTTTTCTTTGAATTAAC+AGG | - | chr8_3:57577682-57577701 | Msa1297360:exon | 25.0% |
| ! | TTTGAATTAACAGGGATTAA+TGG | - | chr8_3:57577691-57577710 | Msa1297360:exon | 25.0% |
| !! | TTCTCAACAATTTTACAACA+TGG | - | chr8_3:57577988-57578007 | Msa1297360:CDS | 25.0% |
| ! | TTATTATAAACGAGAGAACA+AGG | - | chr8_3:57578090-57578109 | Msa1297360:CDS | 25.0% |
| ! | TGGTTAATATTACTTGATAG+AGG | + | chr8_3:57578373-57578392 | None:intergenic | 25.0% |
| ! | TAAACATATGAAGCAACTAA+AGG | - | chr8_3:57578444-57578463 | Msa1297360:CDS | 25.0% |
| !!! | AGTAGTTCTATTTTACCATT+TGG | - | chr8_3:57578718-57578737 | Msa1297360:CDS | 25.0% |
| !! | TCAAGATAGTTATTTCCAAA+TGG | + | chr8_3:57578736-57578755 | None:intergenic | 25.0% |
| !!! | TTTTTTCTTGCAGATGAATA+AGG | - | chr8_3:57578866-57578885 | Msa1297360:CDS | 25.0% |
| ! | GGAATATTGCTTAACAATAA+AGG | - | chr8_3:57578887-57578906 | Msa1297360:CDS | 25.0% |
| ! | GATGGACCAAAAAAAAAAAA+TGG | + | chr8_3:57579048-57579067 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTGGTCCATCATT+TGG | - | chr8_3:57579051-57579070 | Msa1297360:intron | 25.0% |
| ! | AACATATGATAATAATGCCA+AGG | - | chr8_3:57579106-57579125 | Msa1297360:five_prime_UTR | 25.0% |
| !!! | TTTTCTTGTTTTTTGCACAA+TGG | - | chr8_3:57579131-57579150 | Msa1297360:intron | 25.0% |
| AACTATTGGATATATGAGGA+GGG | + | chr8_3:57577380-57577399 | None:intergenic | 30.0% | |
| AAACTATTGGATATATGAGG+AGG | + | chr8_3:57577381-57577400 | None:intergenic | 30.0% | |
| ! | TTTTCAGTTTTTCCCATACA+AGG | - | chr8_3:57577501-57577520 | Msa1297360:three_prime_UTR | 30.0% |
| TAATGATTATGAGTACCCTA+TGG | - | chr8_3:57577730-57577749 | Msa1297360:CDS | 30.0% | |
| ! | TGCATTTCAGTTTGATGATA+TGG | - | chr8_3:57577760-57577779 | Msa1297360:intron | 30.0% |
| ! | ATTTTACAACATGGATGCAA+AGG | - | chr8_3:57577997-57578016 | Msa1297360:CDS | 30.0% |
| ! | TACGGAGAAAACTTGAATTT+TGG | - | chr8_3:57578046-57578065 | Msa1297360:CDS | 30.0% |
| TGTAAATAGAAACCCTATTC+AGG | - | chr8_3:57578120-57578139 | Msa1297360:CDS | 30.0% | |
| !! | GATATCATCGTTTTGAATTG+CGG | + | chr8_3:57578351-57578370 | None:intergenic | 30.0% |
| ! | AAACTCTTGCTTCGATTTTT+GGG | + | chr8_3:57578597-57578616 | None:intergenic | 30.0% |
| ! | TTCCAATAAGTTGAGTATTG+CGG | + | chr8_3:57578677-57578696 | None:intergenic | 30.0% |
| ! | AAATTTTACCTGAGCAACAA+TGG | + | chr8_3:57578764-57578783 | None:intergenic | 30.0% |
| TAATTGAGCTGAATTAGTGA+CGG | - | chr8_3:57578800-57578819 | Msa1297360:CDS | 30.0% | |
| TACCTCAATAATCCAAATGA+TGG | + | chr8_3:57579066-57579085 | None:intergenic | 30.0% | |
| CAAAAAACAAGAAAACACCT+TGG | + | chr8_3:57579126-57579145 | None:intergenic | 30.0% | |
| !!! | TCTTTTTTTTTTCACACACG+AGG | - | chr8_3:57579176-57579195 | Msa1297360:intron | 30.0% |
| !!! | CTTTTTTTTTTCACACACGA+GGG | - | chr8_3:57579177-57579196 | Msa1297360:intron | 30.0% |
| AACTATTGGATATATGAGGA+GGG | + | chr8_3:57577380-57577399 | None:intergenic | 30.0% | |
| AAACTATTGGATATATGAGG+AGG | + | chr8_3:57577381-57577400 | None:intergenic | 30.0% | |
| ! | TTTTCAGTTTTTCCCATACA+AGG | - | chr8_3:57577501-57577520 | Msa1297360:three_prime_UTR | 30.0% |
| TAATGATTATGAGTACCCTA+TGG | - | chr8_3:57577730-57577749 | Msa1297360:CDS | 30.0% | |
| ! | TGCATTTCAGTTTGATGATA+TGG | - | chr8_3:57577760-57577779 | Msa1297360:intron | 30.0% |
| ! | ATTTTACAACATGGATGCAA+AGG | - | chr8_3:57577997-57578016 | Msa1297360:CDS | 30.0% |
| ! | TACGGAGAAAACTTGAATTT+TGG | - | chr8_3:57578046-57578065 | Msa1297360:CDS | 30.0% |
| TGTAAATAGAAACCCTATTC+AGG | - | chr8_3:57578120-57578139 | Msa1297360:CDS | 30.0% | |
| !! | GATATCATCGTTTTGAATTG+CGG | + | chr8_3:57578351-57578370 | None:intergenic | 30.0% |
| ! | AAACTCTTGCTTCGATTTTT+GGG | + | chr8_3:57578597-57578616 | None:intergenic | 30.0% |
| ! | TTCCAATAAGTTGAGTATTG+CGG | + | chr8_3:57578677-57578696 | None:intergenic | 30.0% |
| ! | AAATTTTACCTGAGCAACAA+TGG | + | chr8_3:57578764-57578783 | None:intergenic | 30.0% |
| TAATTGAGCTGAATTAGTGA+CGG | - | chr8_3:57578800-57578819 | Msa1297360:CDS | 30.0% | |
| TACCTCAATAATCCAAATGA+TGG | + | chr8_3:57579066-57579085 | None:intergenic | 30.0% | |
| CAAAAAACAAGAAAACACCT+TGG | + | chr8_3:57579126-57579145 | None:intergenic | 30.0% | |
| !!! | TCTTTTTTTTTTCACACACG+AGG | - | chr8_3:57579176-57579195 | Msa1297360:intron | 30.0% |
| !!! | CTTTTTTTTTTCACACACGA+GGG | - | chr8_3:57579177-57579196 | Msa1297360:intron | 30.0% |
| CAGGTTTGAATTCCTTGTAT+GGG | + | chr8_3:57577516-57577535 | None:intergenic | 35.0% | |
| TCAGGTTTGAATTCCTTGTA+TGG | + | chr8_3:57577517-57577536 | None:intergenic | 35.0% | |
| TGTTGTGTACTTACGAATTC+AGG | + | chr8_3:57577573-57577592 | None:intergenic | 35.0% | |
| GAATTAACAGGGATTAATGG+AGG | - | chr8_3:57577694-57577713 | Msa1297360:CDS | 35.0% | |
| GAAATGCAGATGAATCCATA+GGG | + | chr8_3:57577748-57577767 | None:intergenic | 35.0% | |
| TGAAATGCAGATGAATCCAT+AGG | + | chr8_3:57577749-57577768 | None:intergenic | 35.0% | |
| AGGAATAAGTACTCTCTTGT+GGG | + | chr8_3:57577811-57577830 | None:intergenic | 35.0% | |
| TGATCTGGACTACTTTCAAT+GGG | + | chr8_3:57577896-57577915 | None:intergenic | 35.0% | |
| TTGATCTGGACTACTTTCAA+TGG | + | chr8_3:57577897-57577916 | None:intergenic | 35.0% | |
| ! | TTTGGAAGTGTGATATCTCA+AGG | - | chr8_3:57578064-57578083 | Msa1297360:CDS | 35.0% |
| !!! | TATAGTACCTTTTTCAGTCC+AGG | + | chr8_3:57578223-57578242 | None:intergenic | 35.0% |
| !!! | TGCTGATTCGACCTTTTTAT+CGG | + | chr8_3:57578500-57578519 | None:intergenic | 35.0% |
| ! | GAAACTCTTGCTTCGATTTT+TGG | + | chr8_3:57578598-57578617 | None:intergenic | 35.0% |
| AAAATCGAAGCAAGAGTTTC+TGG | - | chr8_3:57578598-57578617 | Msa1297360:CDS | 35.0% | |
| TGATATAACCATTGTTGCTC+AGG | - | chr8_3:57578753-57578772 | Msa1297360:CDS | 35.0% | |
| ATCCAAAACAACCAGTTTCA+AGG | - | chr8_3:57578953-57578972 | Msa1297360:intron | 35.0% | |
| ATATGTTGATGCCTTGAAAC+TGG | + | chr8_3:57578967-57578986 | None:intergenic | 35.0% | |
| GTCCATCATTTGGATTATTG+AGG | - | chr8_3:57579061-57579080 | Msa1297360:intron | 35.0% | |
| CAGGTTTGAATTCCTTGTAT+GGG | + | chr8_3:57577516-57577535 | None:intergenic | 35.0% | |
| TCAGGTTTGAATTCCTTGTA+TGG | + | chr8_3:57577517-57577536 | None:intergenic | 35.0% | |
| TGTTGTGTACTTACGAATTC+AGG | + | chr8_3:57577573-57577592 | None:intergenic | 35.0% | |
| GAATTAACAGGGATTAATGG+AGG | - | chr8_3:57577694-57577713 | Msa1297360:CDS | 35.0% | |
| GAAATGCAGATGAATCCATA+GGG | + | chr8_3:57577748-57577767 | None:intergenic | 35.0% | |
| TGAAATGCAGATGAATCCAT+AGG | + | chr8_3:57577749-57577768 | None:intergenic | 35.0% | |
| AGGAATAAGTACTCTCTTGT+GGG | + | chr8_3:57577811-57577830 | None:intergenic | 35.0% | |
| TGATCTGGACTACTTTCAAT+GGG | + | chr8_3:57577896-57577915 | None:intergenic | 35.0% | |
| TTGATCTGGACTACTTTCAA+TGG | + | chr8_3:57577897-57577916 | None:intergenic | 35.0% | |
| ! | TTTGGAAGTGTGATATCTCA+AGG | - | chr8_3:57578064-57578083 | Msa1297360:CDS | 35.0% |
| !!! | TATAGTACCTTTTTCAGTCC+AGG | + | chr8_3:57578223-57578242 | None:intergenic | 35.0% |
| !!! | TGCTGATTCGACCTTTTTAT+CGG | + | chr8_3:57578500-57578519 | None:intergenic | 35.0% |
| ! | GAAACTCTTGCTTCGATTTT+TGG | + | chr8_3:57578598-57578617 | None:intergenic | 35.0% |
| AAAATCGAAGCAAGAGTTTC+TGG | - | chr8_3:57578598-57578617 | Msa1297360:CDS | 35.0% | |
| TGATATAACCATTGTTGCTC+AGG | - | chr8_3:57578753-57578772 | Msa1297360:CDS | 35.0% | |
| ATCCAAAACAACCAGTTTCA+AGG | - | chr8_3:57578953-57578972 | Msa1297360:intron | 35.0% | |
| ATATGTTGATGCCTTGAAAC+TGG | + | chr8_3:57578967-57578986 | None:intergenic | 35.0% | |
| GTCCATCATTTGGATTATTG+AGG | - | chr8_3:57579061-57579080 | Msa1297360:intron | 35.0% | |
| TACGAATTCAGGCATGTACT+TGG | + | chr8_3:57577562-57577581 | None:intergenic | 40.0% | |
| GGAATAAGTACTCTCTTGTG+GGG | + | chr8_3:57577810-57577829 | None:intergenic | 40.0% | |
| GAGGAATAAGTACTCTCTTG+TGG | + | chr8_3:57577812-57577831 | None:intergenic | 40.0% | |
| GTTGATGTTGTTGGTATGAG+AGG | + | chr8_3:57577831-57577850 | None:intergenic | 40.0% | |
| !! | TCGCTTGTTGTTGATGTTGT+TGG | + | chr8_3:57577840-57577859 | None:intergenic | 40.0% |
| GATCTGGACTACTTTCAATG+GGG | + | chr8_3:57577895-57577914 | None:intergenic | 40.0% | |
| GAAGCCTTGAGTACTTTAGT+TGG | + | chr8_3:57577941-57577960 | None:intergenic | 40.0% | |
| AAGAAGCCTAAAACCGAGAT+CGG | - | chr8_3:57578022-57578041 | Msa1297360:CDS | 40.0% | |
| CATGATCTTGAGCCTGAATA+GGG | + | chr8_3:57578135-57578154 | None:intergenic | 40.0% | |
| ACATGATCTTGAGCCTGAAT+AGG | + | chr8_3:57578136-57578155 | None:intergenic | 40.0% | |
| TCAGGCTCAAGATCATGTTA+TGG | - | chr8_3:57578138-57578157 | Msa1297360:CDS | 40.0% | |
| ! | CTTTTCCCTTCGTCTTCTTT+CGG | + | chr8_3:57578164-57578183 | None:intergenic | 40.0% |
| AGGAAAGAGCAATGAATCTC+TGG | + | chr8_3:57578192-57578211 | None:intergenic | 40.0% | |
| !!! | CTTTTTCAGTCCAGGAAGAA+TGG | + | chr8_3:57578215-57578234 | None:intergenic | 40.0% |
| CATTCTTCCTGGACTGAAAA+AGG | - | chr8_3:57578213-57578232 | Msa1297360:CDS | 40.0% | |
| TCTGCATGCAAAGTGAACAT+TGG | + | chr8_3:57578393-57578412 | None:intergenic | 40.0% | |
| ATGTTCACTTTGCATGCAGA+TGG | - | chr8_3:57578393-57578412 | Msa1297360:intron | 40.0% | |
| ! | GATGGACAAGGCAACTATTT+TGG | - | chr8_3:57578411-57578430 | Msa1297360:CDS | 40.0% |
| GGAACAAGTAGCCGATAAAA+AGG | - | chr8_3:57578486-57578505 | Msa1297360:CDS | 40.0% | |
| TCTATTCTCTTCGACGATGA+TGG | - | chr8_3:57578535-57578554 | Msa1297360:CDS | 40.0% | |
| ATCCACGGTGATAAACATTG+CGG | - | chr8_3:57578640-57578659 | Msa1297360:CDS | 40.0% | |
| ! | TCTCGTAAGAAGCATAAGTC+AGG | - | chr8_3:57578911-57578930 | Msa1297360:CDS | 40.0% |
| ! | GAAGCATAAGTCAGGTTTTG+AGG | - | chr8_3:57578919-57578938 | Msa1297360:CDS | 40.0% |
| ! | TGCCTTGAAACTGGTTGTTT+TGG | + | chr8_3:57578958-57578977 | None:intergenic | 40.0% |
| AATCTCCACAACGTGAAAGA+GGG | + | chr8_3:57579246-57579265 | None:intergenic | 40.0% | |
| TACGAATTCAGGCATGTACT+TGG | + | chr8_3:57577562-57577581 | None:intergenic | 40.0% | |
| GGAATAAGTACTCTCTTGTG+GGG | + | chr8_3:57577810-57577829 | None:intergenic | 40.0% | |
| GAGGAATAAGTACTCTCTTG+TGG | + | chr8_3:57577812-57577831 | None:intergenic | 40.0% | |
| GTTGATGTTGTTGGTATGAG+AGG | + | chr8_3:57577831-57577850 | None:intergenic | 40.0% | |
| !! | TCGCTTGTTGTTGATGTTGT+TGG | + | chr8_3:57577840-57577859 | None:intergenic | 40.0% |
| GATCTGGACTACTTTCAATG+GGG | + | chr8_3:57577895-57577914 | None:intergenic | 40.0% | |
| GAAGCCTTGAGTACTTTAGT+TGG | + | chr8_3:57577941-57577960 | None:intergenic | 40.0% | |
| AAGAAGCCTAAAACCGAGAT+CGG | - | chr8_3:57578022-57578041 | Msa1297360:CDS | 40.0% | |
| CATGATCTTGAGCCTGAATA+GGG | + | chr8_3:57578135-57578154 | None:intergenic | 40.0% | |
| ACATGATCTTGAGCCTGAAT+AGG | + | chr8_3:57578136-57578155 | None:intergenic | 40.0% | |
| TCAGGCTCAAGATCATGTTA+TGG | - | chr8_3:57578138-57578157 | Msa1297360:CDS | 40.0% | |
| ! | CTTTTCCCTTCGTCTTCTTT+CGG | + | chr8_3:57578164-57578183 | None:intergenic | 40.0% |
| AGGAAAGAGCAATGAATCTC+TGG | + | chr8_3:57578192-57578211 | None:intergenic | 40.0% | |
| !!! | CTTTTTCAGTCCAGGAAGAA+TGG | + | chr8_3:57578215-57578234 | None:intergenic | 40.0% |
| CATTCTTCCTGGACTGAAAA+AGG | - | chr8_3:57578213-57578232 | Msa1297360:CDS | 40.0% | |
| TCTGCATGCAAAGTGAACAT+TGG | + | chr8_3:57578393-57578412 | None:intergenic | 40.0% | |
| ATGTTCACTTTGCATGCAGA+TGG | - | chr8_3:57578393-57578412 | Msa1297360:intron | 40.0% | |
| ! | GATGGACAAGGCAACTATTT+TGG | - | chr8_3:57578411-57578430 | Msa1297360:CDS | 40.0% |
| GGAACAAGTAGCCGATAAAA+AGG | - | chr8_3:57578486-57578505 | Msa1297360:CDS | 40.0% | |
| TCTATTCTCTTCGACGATGA+TGG | - | chr8_3:57578535-57578554 | Msa1297360:CDS | 40.0% | |
| ATCCACGGTGATAAACATTG+CGG | - | chr8_3:57578640-57578659 | Msa1297360:CDS | 40.0% | |
| ! | TCTCGTAAGAAGCATAAGTC+AGG | - | chr8_3:57578911-57578930 | Msa1297360:CDS | 40.0% |
| ! | GAAGCATAAGTCAGGTTTTG+AGG | - | chr8_3:57578919-57578938 | Msa1297360:CDS | 40.0% |
| ! | TGCCTTGAAACTGGTTGTTT+TGG | + | chr8_3:57578958-57578977 | None:intergenic | 40.0% |
| AATCTCCACAACGTGAAAGA+GGG | + | chr8_3:57579246-57579265 | None:intergenic | 40.0% | |
| TGTTCTGTGGGCTTTCAGAA+TGG | + | chr8_3:57577865-57577884 | None:intergenic | 45.0% | |
| TGGGGAAAGAACTGTTCTGT+GGG | + | chr8_3:57577877-57577896 | None:intergenic | 45.0% | |
| ATGGGGAAAGAACTGTTCTG+TGG | + | chr8_3:57577878-57577897 | None:intergenic | 45.0% | |
| GCTGAGACAACAGATTGATC+TGG | + | chr8_3:57577911-57577930 | None:intergenic | 45.0% | |
| ! | ACCGCCAACTAAAGTACTCA+AGG | - | chr8_3:57577934-57577953 | Msa1297360:CDS | 45.0% |
| GCCTTGAGTACTTTAGTTGG+CGG | + | chr8_3:57577938-57577957 | None:intergenic | 45.0% | |
| AGAAGCCTAAAACCGAGATC+GGG | - | chr8_3:57578023-57578042 | Msa1297360:CDS | 45.0% | |
| TTATGGCCGAAAGAAGACGA+AGG | - | chr8_3:57578155-57578174 | Msa1297360:CDS | 45.0% | |
| TATGGCCGAAAGAAGACGAA+GGG | - | chr8_3:57578156-57578175 | Msa1297360:CDS | 45.0% | |
| TTTCAGTCCAGGAAGAATGG+AGG | + | chr8_3:57578212-57578231 | None:intergenic | 45.0% | |
| ACTTTGCATGCAGATGGACA+AGG | - | chr8_3:57578399-57578418 | Msa1297360:intron | 45.0% | |
| GGAACGAGTGAAGACATTAG+AGG | - | chr8_3:57578465-57578484 | Msa1297360:CDS | 45.0% | |
| GACATGCTCATCAGAATCCA+CGG | - | chr8_3:57578625-57578644 | Msa1297360:CDS | 45.0% | |
| GGCCGCAATACTCAACTTAT+TGG | - | chr8_3:57578672-57578691 | Msa1297360:CDS | 45.0% | |
| CAATCTCCACAACGTGAAAG+AGG | + | chr8_3:57579247-57579266 | None:intergenic | 45.0% | |
| TGTTCTGTGGGCTTTCAGAA+TGG | + | chr8_3:57577865-57577884 | None:intergenic | 45.0% | |
| TGGGGAAAGAACTGTTCTGT+GGG | + | chr8_3:57577877-57577896 | None:intergenic | 45.0% | |
| ATGGGGAAAGAACTGTTCTG+TGG | + | chr8_3:57577878-57577897 | None:intergenic | 45.0% | |
| GCTGAGACAACAGATTGATC+TGG | + | chr8_3:57577911-57577930 | None:intergenic | 45.0% | |
| ! | ACCGCCAACTAAAGTACTCA+AGG | - | chr8_3:57577934-57577953 | Msa1297360:CDS | 45.0% |
| GCCTTGAGTACTTTAGTTGG+CGG | + | chr8_3:57577938-57577957 | None:intergenic | 45.0% | |
| AGAAGCCTAAAACCGAGATC+GGG | - | chr8_3:57578023-57578042 | Msa1297360:CDS | 45.0% | |
| TTATGGCCGAAAGAAGACGA+AGG | - | chr8_3:57578155-57578174 | Msa1297360:CDS | 45.0% | |
| TATGGCCGAAAGAAGACGAA+GGG | - | chr8_3:57578156-57578175 | Msa1297360:CDS | 45.0% | |
| TTTCAGTCCAGGAAGAATGG+AGG | + | chr8_3:57578212-57578231 | None:intergenic | 45.0% | |
| ACTTTGCATGCAGATGGACA+AGG | - | chr8_3:57578399-57578418 | Msa1297360:intron | 45.0% | |
| GGAACGAGTGAAGACATTAG+AGG | - | chr8_3:57578465-57578484 | Msa1297360:CDS | 45.0% | |
| GACATGCTCATCAGAATCCA+CGG | - | chr8_3:57578625-57578644 | Msa1297360:CDS | 45.0% | |
| GGCCGCAATACTCAACTTAT+TGG | - | chr8_3:57578672-57578691 | Msa1297360:CDS | 45.0% | |
| CAATCTCCACAACGTGAAAG+AGG | + | chr8_3:57579247-57579266 | None:intergenic | 45.0% | |
| CCTAAAACCGAGATCGGGTA+CGG | - | chr8_3:57578028-57578047 | Msa1297360:CDS | 50.0% | |
| ! | GTTTTCTCCGTACCCGATCT+CGG | + | chr8_3:57578038-57578057 | None:intergenic | 50.0% |
| GCTCTTTCCTCCATTCTTCC+TGG | - | chr8_3:57578202-57578221 | Msa1297360:CDS | 50.0% | |
| TAAACATTGCGGCCGATCTG+CGG | - | chr8_3:57578651-57578670 | Msa1297360:CDS | 50.0% | |
| TTCGTCCCTCTTTCACGTTG+TGG | - | chr8_3:57579238-57579257 | Msa1297360:intron | 50.0% | |
| CCTAAAACCGAGATCGGGTA+CGG | - | chr8_3:57578028-57578047 | Msa1297360:CDS | 50.0% | |
| ! | GTTTTCTCCGTACCCGATCT+CGG | + | chr8_3:57578038-57578057 | None:intergenic | 50.0% |
| GCTCTTTCCTCCATTCTTCC+TGG | - | chr8_3:57578202-57578221 | Msa1297360:CDS | 50.0% | |
| TAAACATTGCGGCCGATCTG+CGG | - | chr8_3:57578651-57578670 | Msa1297360:CDS | 50.0% | |
| TTCGTCCCTCTTTCACGTTG+TGG | - | chr8_3:57579238-57579257 | Msa1297360:intron | 50.0% | |
| ! | CCGTACCCGATCTCGGTTTT+AGG | + | chr8_3:57578031-57578050 | None:intergenic | 55.0% |
| GGCCGCAATGTTTATCACCG+TGG | + | chr8_3:57578645-57578664 | None:intergenic | 55.0% | |
| ! | TGAGTATTGCGGCCGCAGAT+CGG | + | chr8_3:57578666-57578685 | None:intergenic | 55.0% |
| ! | CCGTACCCGATCTCGGTTTT+AGG | + | chr8_3:57578031-57578050 | None:intergenic | 55.0% |
| GGCCGCAATGTTTATCACCG+TGG | + | chr8_3:57578645-57578664 | None:intergenic | 55.0% | |
| ! | TGAGTATTGCGGCCGCAGAT+CGG | + | chr8_3:57578666-57578685 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 57577341 | 57579304 | 57577341 | ID=Msa1297360;Name=Msa1297360 |
| chr8_3 | mRNA | 57577341 | 57579304 | 57577341 | ID=Msa1297360-mRNA-1;Parent=Msa1297360;Name=Msa1297360-mRNA-1;_AED=0.02;_eAED=0.02;_QI=64|1|1|1|0.75|0.6|5|351|335 |
| chr8_3 | exon | 57577341 | 57577766 | 57577341 | ID=Msa1297360-mRNA-1:exon:16506;Parent=Msa1297360-mRNA-1 |
| chr8_3 | exon | 57577871 | 57578233 | 57577871 | ID=Msa1297360-mRNA-1:exon:16505;Parent=Msa1297360-mRNA-1 |
| chr8_3 | exon | 57578411 | 57578941 | 57578411 | ID=Msa1297360-mRNA-1:exon:16504;Parent=Msa1297360-mRNA-1 |
| chr8_3 | exon | 57579067 | 57579137 | 57579067 | ID=Msa1297360-mRNA-1:exon:16503;Parent=Msa1297360-mRNA-1 |
| chr8_3 | exon | 57579273 | 57579304 | 57579273 | ID=Msa1297360-mRNA-1:exon:16502;Parent=Msa1297360-mRNA-1 |
| chr8_3 | five_prime_UTR | 57579273 | 57579304 | 57579273 | ID=Msa1297360-mRNA-1:five_prime_utr;Parent=Msa1297360-mRNA-1 |
| chr8_3 | five_prime_UTR | 57579106 | 57579137 | 57579106 | ID=Msa1297360-mRNA-1:five_prime_utr;Parent=Msa1297360-mRNA-1 |
| chr8_3 | CDS | 57579067 | 57579105 | 57579067 | ID=Msa1297360-mRNA-1:cds;Parent=Msa1297360-mRNA-1 |
| chr8_3 | CDS | 57578411 | 57578941 | 57578411 | ID=Msa1297360-mRNA-1:cds;Parent=Msa1297360-mRNA-1 |
| chr8_3 | CDS | 57577871 | 57578233 | 57577871 | ID=Msa1297360-mRNA-1:cds;Parent=Msa1297360-mRNA-1 |
| chr8_3 | CDS | 57577692 | 57577766 | 57577692 | ID=Msa1297360-mRNA-1:cds;Parent=Msa1297360-mRNA-1 |
| chr8_3 | three_prime_UTR | 57577341 | 57577691 | 57577341 | ID=Msa1297360-mRNA-1:three_prime_utr;Parent=Msa1297360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
