Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297730 | sp|O49696|ALMTC_ARATH | 61.770 | 565 | 154 | 9 | 1 | 519 | 1 | 549 | 0.0 | 665 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297730 | G7JGH5 | 96.816 | 534 | 17 | 0 | 1 | 534 | 1 | 534 | 0.0 | 1073 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1205620 | Msa1297730 | 0.993087 | 2.273284e-197 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297730 | MtrunA17_Chr4g0054741 | 90.824 | 534 | 49 | 0 | 1 | 534 | 1 | 534 | 0.0 | 969 |
| Msa1297730 | MtrunA17_Chr4g0054771 | 97.656 | 384 | 9 | 0 | 151 | 534 | 3 | 386 | 0.0 | 780 |
| Msa1297730 | MtrunA17_Chr1g0212201 | 57.249 | 538 | 216 | 4 | 9 | 534 | 1 | 536 | 0.0 | 630 |
| Msa1297730 | MtrunA17_Chr1g0212251 | 59.738 | 534 | 194 | 7 | 16 | 534 | 5 | 532 | 0.0 | 622 |
| Msa1297730 | MtrunA17_Chr5g0400471 | 70.323 | 465 | 97 | 6 | 105 | 532 | 3 | 463 | 0.0 | 613 |
| Msa1297730 | MtrunA17_Chr1g0212291 | 58.161 | 533 | 205 | 5 | 16 | 533 | 6 | 535 | 0.0 | 599 |
| Msa1297730 | MtrunA17_Chr1g0188881 | 35.052 | 485 | 252 | 7 | 25 | 504 | 23 | 449 | 7.08e-96 | 300 |
| Msa1297730 | MtrunA17_Chr1g0188871 | 38.583 | 381 | 222 | 3 | 25 | 399 | 17 | 391 | 2.26e-90 | 285 |
| Msa1297730 | MtrunA17_Chr4g0025591 | 41.292 | 356 | 198 | 3 | 34 | 381 | 19 | 371 | 1.31e-87 | 278 |
| Msa1297730 | MtrunA17_Chr2g0321971 | 35.941 | 409 | 243 | 7 | 49 | 446 | 37 | 437 | 1.22e-81 | 261 |
| Msa1297730 | MtrunA17_Chr7g0267471 | 41.520 | 342 | 194 | 2 | 49 | 389 | 42 | 378 | 1.40e-81 | 262 |
| Msa1297730 | MtrunA17_Chr6g0484691 | 32.955 | 528 | 304 | 11 | 15 | 505 | 62 | 576 | 6.97e-81 | 264 |
| Msa1297730 | MtrunA17_Chr4g0054761 | 94.702 | 151 | 8 | 0 | 1 | 151 | 1 | 151 | 1.97e-78 | 243 |
| Msa1297730 | MtrunA17_Chr7g0259731 | 38.551 | 345 | 193 | 6 | 54 | 389 | 61 | 395 | 3.72e-77 | 249 |
| Msa1297730 | MtrunA17_Chr1g0210101 | 33.613 | 476 | 293 | 9 | 48 | 505 | 112 | 582 | 6.43e-76 | 251 |
| Msa1297730 | MtrunA17_Chr8g0390931 | 33.603 | 494 | 282 | 9 | 49 | 505 | 59 | 543 | 1.76e-75 | 249 |
| Msa1297730 | MtrunA17_Chr2g0321961 | 38.081 | 344 | 209 | 3 | 49 | 391 | 37 | 377 | 1.25e-72 | 238 |
| Msa1297730 | MtrunA17_Chr8g0390921 | 30.939 | 543 | 319 | 12 | 4 | 505 | 26 | 553 | 5.17e-72 | 240 |
| Msa1297730 | MtrunA17_Chr8g0390901 | 31.207 | 439 | 264 | 8 | 103 | 505 | 9 | 445 | 1.45e-61 | 209 |
| Msa1297730 | MtrunA17_Chr5g0400481 | 65.217 | 115 | 32 | 2 | 1 | 107 | 1 | 115 | 1.47e-44 | 153 |
| Msa1297730 | MtrunA17_Chr8g0390911 | 38.947 | 95 | 46 | 2 | 11 | 104 | 37 | 120 | 4.37e-16 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297730 | AT4G17970.1 | 61.770 | 565 | 154 | 9 | 1 | 519 | 1 | 549 | 0.0 | 665 |
| Msa1297730 | AT5G46610.1 | 58.899 | 545 | 188 | 8 | 1 | 519 | 1 | 535 | 0.0 | 615 |
| Msa1297730 | AT5G46600.1 | 57.390 | 521 | 179 | 7 | 19 | 506 | 16 | 526 | 0.0 | 588 |
| Msa1297730 | AT5G46610.2 | 55.413 | 545 | 183 | 9 | 1 | 519 | 1 | 511 | 0.0 | 561 |
| Msa1297730 | AT5G46610.3 | 52.661 | 545 | 175 | 9 | 1 | 519 | 1 | 488 | 0.0 | 518 |
| Msa1297730 | AT4G00910.1 | 35.928 | 501 | 262 | 10 | 10 | 505 | 21 | 467 | 4.44e-99 | 308 |
| Msa1297730 | AT1G08440.1 | 40.698 | 344 | 199 | 3 | 49 | 389 | 13 | 354 | 2.75e-84 | 270 |
| Msa1297730 | AT1G08430.1 | 38.905 | 347 | 204 | 4 | 49 | 389 | 13 | 357 | 4.84e-78 | 254 |
| Msa1297730 | AT3G11680.2 | 39.050 | 379 | 220 | 4 | 17 | 389 | 2 | 375 | 6.72e-77 | 251 |
| Msa1297730 | AT3G11680.1 | 39.510 | 367 | 208 | 4 | 32 | 389 | 12 | 373 | 9.45e-77 | 250 |
| Msa1297730 | AT3G18440.1 | 32.400 | 500 | 298 | 11 | 43 | 505 | 73 | 569 | 1.93e-75 | 250 |
| Msa1297730 | AT1G18420.1 | 32.213 | 506 | 289 | 11 | 46 | 505 | 80 | 577 | 1.02e-74 | 248 |
| Msa1297730 | AT1G18420.2 | 32.072 | 502 | 287 | 11 | 50 | 505 | 1 | 494 | 3.77e-73 | 241 |
| Msa1297730 | AT2G27240.2 | 38.329 | 347 | 203 | 3 | 49 | 389 | 13 | 354 | 3.28e-72 | 238 |
| Msa1297730 | AT2G27240.1 | 36.141 | 368 | 208 | 4 | 49 | 389 | 13 | 380 | 9.09e-69 | 230 |
| Msa1297730 | AT2G17470.1 | 31.959 | 485 | 296 | 13 | 49 | 505 | 31 | 509 | 3.34e-67 | 226 |
| Msa1297730 | AT2G17470.2 | 31.959 | 485 | 296 | 13 | 49 | 505 | 53 | 531 | 4.18e-67 | 227 |
| Msa1297730 | AT1G68600.1 | 30.263 | 532 | 324 | 17 | 12 | 505 | 7 | 529 | 1.30e-65 | 222 |
| Msa1297730 | AT1G25480.1 | 30.943 | 488 | 303 | 11 | 48 | 505 | 58 | 541 | 3.17e-62 | 213 |
| Msa1297730 | AT4G17585.1 | 46.825 | 126 | 62 | 2 | 17 | 141 | 11 | 132 | 8.79e-23 | 95.1 |
Find 116 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGGAGAAATTGAAGTTTC+TGG | 0.169451 | 8_3:-58218010 | Msa1297730:CDS |
| CTGTTGGAGCCACTCTTTAA+AGG | 0.199252 | 8_3:-58219129 | Msa1297730:CDS |
| AGATTATCGGAGAGAATTTC+TGG | 0.215757 | 8_3:+58216570 | None:intergenic |
| CTGTTCAGCTGATACACTTT+TGG | 0.231447 | 8_3:+58216377 | None:intergenic |
| CAAAGGTTATAAAGCAGTTT+TGG | 0.231701 | 8_3:-58217957 | Msa1297730:CDS |
| TCGTAATTCTTCTTTATATA+GGG | 0.249245 | 8_3:+58218355 | None:intergenic |
| AGATCTTCCCCTGACCAATT+TGG | 0.256707 | 8_3:+58218184 | None:intergenic |
| TCTAGGCCATCATGAACTTT+AGG | 0.261202 | 8_3:+58219348 | None:intergenic |
| GGATTGGCGAGAATGCTATT+TGG | 0.281542 | 8_3:-58219107 | Msa1297730:CDS |
| TTACATACCTTCTATAGATT+TGG | 0.283097 | 8_3:+58218126 | None:intergenic |
| ATTCTTCAGCTTTGTTAGAT+TGG | 0.285201 | 8_3:-58216404 | Msa1297730:CDS |
| TGTGGAAACTGTGGCGAAAC+TGG | 0.305124 | 8_3:-58216235 | Msa1297730:CDS |
| CAATGCTTCACGAAGATTAT+CGG | 0.311198 | 8_3:+58216557 | None:intergenic |
| AATGCATGGATCACCCTTCT+TGG | 0.318870 | 8_3:+58219192 | None:intergenic |
| TCCTAGGTATAGCCATTTCT+AGG | 0.327354 | 8_3:+58219331 | None:intergenic |
| ATCGTAATTCTTCTTTATAT+AGG | 0.334565 | 8_3:+58218354 | None:intergenic |
| GTCTCTTAGTATTTCCAAAT+TGG | 0.335490 | 8_3:-58218198 | Msa1297730:CDS |
| ATAAAGAAGAATTACGATTA+TGG | 0.345300 | 8_3:-58218349 | Msa1297730:CDS |
| GAACTGTTCTTCGCCAATTC+GGG | 0.355284 | 8_3:-58217413 | Msa1297730:CDS |
| AAAGGTTTCCGTGTTTAGTT+TGG | 0.365423 | 8_3:-58219245 | Msa1297730:CDS |
| TCCACAGCTTTCAAACTTGA+AGG | 0.368733 | 8_3:-58218154 | Msa1297730:CDS |
| TGTTGGAGCCACTCTTTAAA+GGG | 0.374070 | 8_3:-58219128 | Msa1297730:CDS |
| TTAGTATTTCCAAATTGGTC+AGG | 0.376995 | 8_3:-58218193 | Msa1297730:CDS |
| GATTGGCGAGAATGCTATTT+GGG | 0.389656 | 8_3:-58219106 | Msa1297730:CDS |
| GATTATGTTGCAAATGAATC+TGG | 0.397818 | 8_3:-58218703 | Msa1297730:CDS |
| GGAACTGTTCTTCGCCAATT+CGG | 0.400591 | 8_3:-58217414 | Msa1297730:CDS |
| GTTGTTAGCTTGGATGTCAT+TGG | 0.409141 | 8_3:+58216485 | None:intergenic |
| CTTACGTTCTTGTAGTTGTT+CGG | 0.413521 | 8_3:+58216344 | None:intergenic |
| AAAGGGCTGAATAGAGGATT+GGG | 0.415501 | 8_3:-58218760 | Msa1297730:CDS |
| CTACCACTGTATACCCGAAT+TGG | 0.422330 | 8_3:+58217400 | None:intergenic |
| TCACAGCCACGACTCTTCTT+AGG | 0.430174 | 8_3:-58216510 | Msa1297730:CDS |
| TTATGCAAGGGTCCTTGAAC+AGG | 0.434838 | 8_3:+58216664 | None:intergenic |
| GACAACCATTTCCCTTCTCA+TGG | 0.438588 | 8_3:-58216102 | Msa1297730:CDS |
| GGCCTAGCCAAATCTATAGA+AGG | 0.440228 | 8_3:-58218133 | Msa1297730:intron |
| CTCCTCCATGAGAAGGGAAA+TGG | 0.440503 | 8_3:+58216097 | None:intergenic |
| TGCAGGCATTACATGGAAGT+TGG | 0.441399 | 8_3:-58217494 | Msa1297730:intron |
| GAGCCACTCTTTAAAGGGAT+TGG | 0.444594 | 8_3:-58219123 | Msa1297730:CDS |
| ATCTGTTCGAGTCCTGTTCA+AGG | 0.456363 | 8_3:-58216676 | Msa1297730:CDS |
| AGTTCATGATGGCCTAGAAA+TGG | 0.462800 | 8_3:-58219343 | Msa1297730:CDS |
| ATGCATGGATCACCCTTCTT+GGG | 0.463027 | 8_3:+58219193 | None:intergenic |
| CTGCAATGAAAACAGCTTGA+AGG | 0.467393 | 8_3:+58218674 | None:intergenic |
| ATCTAACAAAGCTGAAGAAT+CGG | 0.473243 | 8_3:+58216407 | None:intergenic |
| CAAAGGGCTGAATAGAGGAT+TGG | 0.475828 | 8_3:-58218761 | Msa1297730:CDS |
| TTATGCAAAGGGCTGAATAG+AGG | 0.477408 | 8_3:-58218766 | Msa1297730:CDS |
| GTGATCCATGCATTCAAAGT+TGG | 0.477949 | 8_3:-58219183 | Msa1297730:CDS |
| TGTCAACAGTATGTAAAAGT+TGG | 0.487010 | 8_3:-58217435 | Msa1297730:CDS |
| GCCACCATAGCTTCCTCTCA+TGG | 0.496583 | 8_3:-58216456 | Msa1297730:CDS |
| AACAGGACTCGAACAGATCT+CGG | 0.497650 | 8_3:+58216681 | None:intergenic |
| ATACTAAGAGACTCATGAAA+AGG | 0.499715 | 8_3:+58218209 | None:intergenic |
| GCAGGCATTACATGGAAGTT+GGG | 0.503722 | 8_3:-58217493 | Msa1297730:intron |
| AATGAAGCAAAAGCAGCAAA+AGG | 0.504471 | 8_3:+58216261 | None:intergenic |
| TACGTTTCTTCCATTTCTCA+AGG | 0.504702 | 8_3:+58219292 | None:intergenic |
| GGATTGGGGACATTATTAGC+AGG | 0.506171 | 8_3:-58218745 | Msa1297730:CDS |
| GCCTTCAAGTTTGAAAGCTG+TGG | 0.506523 | 8_3:+58218153 | None:intergenic |
| GTTTAGTTTGGAAGACTACA+TGG | 0.510665 | 8_3:-58219233 | Msa1297730:CDS |
| TACATGGAAGTTGGGAGCCA+AGG | 0.512610 | 8_3:-58217485 | Msa1297730:CDS |
| ATTGATGAAGTTGAAGAACT+TGG | 0.519020 | 8_3:-58216204 | Msa1297730:CDS |
| TGACAGTACCTAAAATGCCT+TGG | 0.520588 | 8_3:+58217468 | None:intergenic |
| ATAAACCAACTTTGAATGCA+TGG | 0.520687 | 8_3:+58219178 | None:intergenic |
| TGAACTGTGCAGGCATTACA+TGG | 0.522777 | 8_3:-58217501 | Msa1297730:intron |
| TTGTCCAACACATCAACTCT+TGG | 0.524411 | 8_3:+58216120 | None:intergenic |
| TAGTATTTCCAAATTGGTCA+GGG | 0.525758 | 8_3:-58218192 | Msa1297730:CDS |
| AATGGCACAGCCAATGGCTA+TGG | 0.528827 | 8_3:+58218234 | None:intergenic |
| TGGCGAGCATGTTGTTAGCT+TGG | 0.536847 | 8_3:+58216475 | None:intergenic |
| CGCTTCTATACCATAGCCAT+TGG | 0.538092 | 8_3:-58218244 | Msa1297730:CDS |
| CTCAATCTCCTCCATGAGAA+GGG | 0.539709 | 8_3:+58216091 | None:intergenic |
| AAGGCAAATGGCACAGCCAA+TGG | 0.540672 | 8_3:+58218228 | None:intergenic |
| TCTGCTGCTAGTCTTATGCA+AGG | 0.540766 | 8_3:+58216651 | None:intergenic |
| AGTTGATAATGTCGTGAAGA+TGG | 0.541232 | 8_3:-58218275 | Msa1297730:CDS |
| GCTTACCAATGTTTCATCAG+TGG | 0.542200 | 8_3:+58217925 | None:intergenic |
| AAAATCCACTGATGAAACAT+TGG | 0.545294 | 8_3:-58217930 | Msa1297730:intron |
| GAGACTCATGAAAAGGCAAA+TGG | 0.547631 | 8_3:+58218216 | None:intergenic |
| TGGGACATGATGACCCAAGA+AGG | 0.548075 | 8_3:-58219206 | Msa1297730:CDS |
| AGTTGAAGAACTTGGTCGGT+TGG | 0.550930 | 8_3:-58216196 | Msa1297730:CDS |
| CAGGGGCAACTTTATGCAAA+GGG | 0.551257 | 8_3:-58218777 | Msa1297730:CDS |
| GATCTGCAGCCACATATATG+AGG | 0.555277 | 8_3:-58218384 | Msa1297730:CDS |
| ACTCAATCTCCTCCATGAGA+AGG | 0.555510 | 8_3:+58216090 | None:intergenic |
| TTGTTTGAGAACAGAAATCC+AGG | 0.562615 | 8_3:-58217367 | Msa1297730:intron |
| TATACAGTGGTAGCTCTACA+TGG | 0.568140 | 8_3:-58217390 | Msa1297730:CDS |
| GCAGGGGCAACTTTATGCAA+AGG | 0.574504 | 8_3:-58218778 | Msa1297730:intron |
| CTTTCCATGAGAGGAAGCTA+TGG | 0.576616 | 8_3:+58216452 | None:intergenic |
| TGTATCAGCTGAACAGACAA+TGG | 0.578408 | 8_3:-58216370 | Msa1297730:CDS |
| GCAAAAGCAGCAAAAGGCAA+TGG | 0.580036 | 8_3:+58216267 | None:intergenic |
| GAGTGAGCTCTTTCCATGAG+AGG | 0.581421 | 8_3:+58216443 | None:intergenic |
| GGGAATGAACCTCATATATG+TGG | 0.581767 | 8_3:+58218375 | None:intergenic |
| ATGATTCCTAAAGTTCATGA+TGG | 0.582610 | 8_3:-58219354 | Msa1297730:CDS |
| GCCTAGAAATGGCTATACCT+AGG | 0.588780 | 8_3:-58219332 | Msa1297730:CDS |
| ATTGAGTCTGATAAAGAGCA+AGG | 0.593826 | 8_3:-58216074 | Msa1297730:exon |
| AGAGAATTTCTGGTGAGCAA+TGG | 0.596330 | 8_3:+58216580 | None:intergenic |
| TCGCCAATCCCTTTAAAGAG+TGG | 0.596561 | 8_3:+58219120 | None:intergenic |
| GATTGGGGACATTATTAGCA+GGG | 0.597708 | 8_3:-58218744 | Msa1297730:CDS |
| TACCTTCTATAGATTTGGCT+AGG | 0.600939 | 8_3:+58218131 | None:intergenic |
| TTCATTGCTTGTGGAAACTG+TGG | 0.606323 | 8_3:-58216244 | Msa1297730:CDS |
| AGTTTGGAAGACTACATGGA+AGG | 0.606777 | 8_3:-58219229 | Msa1297730:CDS |
| TGGAAGACTACATGGAAGGT+GGG | 0.611396 | 8_3:-58219225 | Msa1297730:CDS |
| TTGGAAGACTACATGGAAGG+TGG | 0.614695 | 8_3:-58219226 | Msa1297730:CDS |
| CTGCTGCTAGTCTTATGCAA+GGG | 0.615929 | 8_3:+58216652 | None:intergenic |
| ATGAAGTTGAAGAACTTGGT+CGG | 0.621502 | 8_3:-58216200 | Msa1297730:CDS |
| GGGACATGATGACCCAAGAA+GGG | 0.622433 | 8_3:-58219205 | Msa1297730:CDS |
| TCCATGAGAGGAAGCTATGG+TGG | 0.626566 | 8_3:+58216455 | None:intergenic |
| TGTGATGATTCAATATACAA+AGG | 0.645562 | 8_3:-58217974 | Msa1297730:CDS |
| AACCATTTCCCTTCTCATGG+AGG | 0.646179 | 8_3:-58216099 | Msa1297730:CDS |
| AGTATTTCCAAATTGGTCAG+GGG | 0.650407 | 8_3:-58218191 | Msa1297730:CDS |
| GAAACCAAGAGTTGATGTGT+TGG | 0.651294 | 8_3:-58216124 | Msa1297730:CDS |
| TTGGAGCCTAAGAAGAGTCG+TGG | 0.653969 | 8_3:+58216504 | None:intergenic |
| TTGCATAAGACTAGCAGCAG+AGG | 0.655213 | 8_3:-58216649 | Msa1297730:CDS |
| TCTTCACGACATTATCAACT+CGG | 0.657801 | 8_3:+58218278 | None:intergenic |
| GAAGAATTACGATTATGGTG+TGG | 0.658310 | 8_3:-58218344 | Msa1297730:CDS |
| GTGGTGTTCGAATTCACCGC+AGG | 0.662552 | 8_3:-58219066 | Msa1297730:intron |
| TCGCCAATTCGGGTATACAG+TGG | 0.664124 | 8_3:-58217403 | Msa1297730:CDS |
| GAATTCGAACACCACGACGA+CGG | 0.674271 | 8_3:+58219074 | None:intergenic |
| AAGGGCTGAATAGAGGATTG+GGG | 0.679447 | 8_3:-58218759 | Msa1297730:CDS |
| GGCTGTCATGACCGTCGTCG+TGG | 0.681791 | 8_3:-58219085 | Msa1297730:CDS |
| CAATGGCTATGGTATAGAAG+CGG | 0.684555 | 8_3:+58218245 | None:intergenic |
| GTAGTCTTCCAAACTAAACA+CGG | 0.700142 | 8_3:+58219237 | None:intergenic |
| TGTTTCAAAGAGTATAGACA+TGG | 0.707293 | 8_3:-58216171 | Msa1297730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATTTTTTAATTATTAT+TGG | - | chr8_3:58217712-58217731 | Msa1297730:intron | 0.0% |
| !!! | TGAGATAAAAAAAATTATTT+TGG | + | chr8_3:58216908-58216927 | None:intergenic | 10.0% |
| !!! | AATTATTCATAAATCTTTTT+TGG | - | chr8_3:58217501-58217520 | Msa1297730:intron | 10.0% |
| !!! | TTAATTTTTGAAATCATTAT+TGG | + | chr8_3:58218361-58218380 | None:intergenic | 10.0% |
| !!! | TCTATCATAATTTTAAATTG+CGG | + | chr8_3:58216455-58216474 | None:intergenic | 15.0% |
| !! | CACAAAATTGTATATTTATA+TGG | - | chr8_3:58216816-58216835 | Msa1297730:intron | 15.0% |
| !!! | TATAACAACATTTTATTGTA+CGG | - | chr8_3:58217261-58217280 | Msa1297730:intron | 15.0% |
| !! | AATTTCAAAAGCTAATTTAT+GGG | + | chr8_3:58218137-58218156 | None:intergenic | 15.0% |
| !!! | ATCTTAAAATTTGAATTTTG+AGG | + | chr8_3:58218166-58218185 | None:intergenic | 15.0% |
| !!! | TCAAAATTCAAATTTTAAGA+TGG | - | chr8_3:58218165-58218184 | Msa1297730:CDS | 15.0% |
| !!! | TGTATTTTTCTACAATATCA+AGG | + | chr8_3:58216341-58216360 | None:intergenic | 20.0% |
| !! | ATAGATAGATAGATAGTATA+AGG | - | chr8_3:58216493-58216512 | Msa1297730:CDS | 20.0% |
| !!! | TAATTTGTAATCTCTTTTGA+TGG | - | chr8_3:58216529-58216548 | Msa1297730:CDS | 20.0% |
| !! | TCGTAATTCTTCTTTATATA+GGG | + | chr8_3:58216977-58216996 | None:intergenic | 20.0% |
| !! | ATCGTAATTCTTCTTTATAT+AGG | + | chr8_3:58216978-58216997 | None:intergenic | 20.0% |
| !! | ATAAAGAAGAATTACGATTA+TGG | - | chr8_3:58216980-58216999 | Msa1297730:intron | 20.0% |
| !!! | ATATTTAAAGTGGTTGAATA+TGG | + | chr8_3:58217698-58217717 | None:intergenic | 20.0% |
| !! | ATTTCAAAAGCTAATTTATG+GGG | + | chr8_3:58218136-58218155 | None:intergenic | 20.0% |
| !! | GAATTTCAAAAGCTAATTTA+TGG | + | chr8_3:58218138-58218157 | None:intergenic | 20.0% |
| !!! | TAATTACAATTTTACTCATC+TGG | + | chr8_3:58219022-58219041 | None:intergenic | 20.0% |
| ! | AGTTTCTAACTAAACTCAAA+TGG | - | chr8_3:58216294-58216313 | Msa1297730:CDS | 25.0% |
| ! | TTATAGTTGCTTATAGTTGA+AGG | - | chr8_3:58216387-58216406 | Msa1297730:CDS | 25.0% |
| ! | AGATAGATAGTATAAGGTTA+AGG | - | chr8_3:58216499-58216518 | Msa1297730:CDS | 25.0% |
| ! | TGTGATGTTGAAATAACATT+AGG | + | chr8_3:58216710-58216729 | None:intergenic | 25.0% |
| ! | GAATTACTTCTTAAAATACC+AGG | + | chr8_3:58216874-58216893 | None:intergenic | 25.0% |
| !!! | AATTATTTTGGTTACAGTTG+AGG | + | chr8_3:58216896-58216915 | None:intergenic | 25.0% |
| ! | TTTATCTCAATTGTTGTGTT+TGG | - | chr8_3:58216919-58216938 | Msa1297730:intron | 25.0% |
| ! | TTACATACCTTCTATAGATT+TGG | + | chr8_3:58217206-58217225 | None:intergenic | 25.0% |
| ! | TTTACAACACATAGTTTCAA+AGG | - | chr8_3:58217228-58217247 | Msa1297730:intron | 25.0% |
| !!! | TGTGTCAGTGAATATTTTAA+TGG | - | chr8_3:58217301-58217320 | Msa1297730:intron | 25.0% |
| ! | TGTGATGATTCAATATACAA+AGG | - | chr8_3:58217355-58217374 | Msa1297730:intron | 25.0% |
| ! | ATGAATCAAAACAAGATGAA+TGG | + | chr8_3:58217429-58217448 | None:intergenic | 25.0% |
| !! | ATTTAGAATTGCTTGACTTA+GGG | + | chr8_3:58217484-58217503 | None:intergenic | 25.0% |
| !! | AATTTAGAATTGCTTGACTT+AGG | + | chr8_3:58217485-58217504 | None:intergenic | 25.0% |
| ! | ATCAGTTGTTAATTAGCATA+GGG | - | chr8_3:58217557-58217576 | Msa1297730:intron | 25.0% |
| ! | GTTCAAAACAAAACGATTTA+AGG | + | chr8_3:58217813-58217832 | None:intergenic | 25.0% |
| ! | TAACATTATCCTTCATCAAA+TGG | + | chr8_3:58218039-58218058 | None:intergenic | 25.0% |
| ! | CAAAATAGTGGTTATATCAT+AGG | - | chr8_3:58218096-58218115 | Msa1297730:intron | 25.0% |
| ! | TTTCAAAAGCTAATTTATGG+GGG | + | chr8_3:58218135-58218154 | None:intergenic | 25.0% |
| ATGATTCCTAAAGTTCATGA+TGG | - | chr8_3:58215975-58215994 | Msa1297730:three_prime_UTR | 30.0% | |
| ! | AAGAAACGTATGCATGTTTT+TGG | - | chr8_3:58216050-58216069 | Msa1297730:three_prime_UTR | 30.0% |
| ATAAACCAACTTTGAATGCA+TGG | + | chr8_3:58216154-58216173 | None:intergenic | 30.0% | |
| !!! | TGTATCATTGCTTTTTCTGT+TGG | - | chr8_3:58216184-58216203 | Msa1297730:CDS | 30.0% |
| TAGAAACTGATATATACCTG+CGG | + | chr8_3:58216282-58216301 | None:intergenic | 30.0% | |
| TTTCAAAACCTTTGATGTTG+CGG | - | chr8_3:58216410-58216429 | Msa1297730:CDS | 30.0% | |
| GATTATGTTGCAAATGAATC+TGG | - | chr8_3:58216626-58216645 | Msa1297730:CDS | 30.0% | |
| ! | GCAGTTGCAGTTTTTATAAT+AGG | - | chr8_3:58216674-58216693 | Msa1297730:CDS | 30.0% |
| !! | ATTTTGACAACATATGTCGT+CGG | + | chr8_3:58216845-58216864 | None:intergenic | 30.0% |
| TGTTGTCAAAATATCATTCC+TGG | - | chr8_3:58216853-58216872 | Msa1297730:intron | 30.0% | |
| ATACTAAGAGACTCATGAAA+AGG | + | chr8_3:58217123-58217142 | None:intergenic | 30.0% | |
| GTCTCTTAGTATTTCCAAAT+TGG | - | chr8_3:58217131-58217150 | Msa1297730:intron | 30.0% | |
| TTAGTATTTCCAAATTGGTC+AGG | - | chr8_3:58217136-58217155 | Msa1297730:intron | 30.0% | |
| TAGTATTTCCAAATTGGTCA+GGG | - | chr8_3:58217137-58217156 | Msa1297730:intron | 30.0% | |
| AATGGAGAAATTGAAGTTTC+TGG | - | chr8_3:58217319-58217338 | Msa1297730:intron | 30.0% | |
| ! | CAAAGGTTATAAAGCAGTTT+TGG | - | chr8_3:58217372-58217391 | Msa1297730:CDS | 30.0% |
| AAAATCCACTGATGAAACAT+TGG | - | chr8_3:58217399-58217418 | Msa1297730:CDS | 30.0% | |
| CATCAGTTGTTAATTAGCAT+AGG | - | chr8_3:58217556-58217575 | Msa1297730:intron | 30.0% | |
| AATCACAAAACAGACATATG+TGG | - | chr8_3:58217672-58217691 | Msa1297730:intron | 30.0% | |
| ! | ACTTTTACATACTGTTGACA+TGG | + | chr8_3:58217894-58217913 | None:intergenic | 30.0% |
| TGTCAACAGTATGTAAAAGT+TGG | - | chr8_3:58217894-58217913 | Msa1297730:intron | 30.0% | |
| GTTACCTTTATATTCTCTGT+TGG | - | chr8_3:58218055-58218074 | Msa1297730:intron | 30.0% | |
| ATCTCCAACAGAGAATATAA+AGG | + | chr8_3:58218062-58218081 | None:intergenic | 30.0% | |
| !!! | CACTATTTTGACTAGACATA+GGG | + | chr8_3:58218086-58218105 | None:intergenic | 30.0% |
| ATAGTGGTTATATCATAGGT+TGG | - | chr8_3:58218100-58218119 | Msa1297730:intron | 30.0% | |
| TTCAAAAGCTAATTTATGGG+GGG | + | chr8_3:58218134-58218153 | None:intergenic | 30.0% | |
| !! | GTGAAATTTAGACTAGTCTT+AGG | + | chr8_3:58218237-58218256 | None:intergenic | 30.0% |
| ATAACTACATGTGTCAGTAT+TGG | - | chr8_3:58218391-58218410 | Msa1297730:intron | 30.0% | |
| ACCAAACATGCATTTATTCT+GGG | - | chr8_3:58218433-58218452 | Msa1297730:intron | 30.0% | |
| !!! | TTCTGGGTTTTTTGAAGTAT+CGG | - | chr8_3:58218449-58218468 | Msa1297730:intron | 30.0% |
| GAACGAGAATTAGTCAATTA+GGG | + | chr8_3:58218582-58218601 | None:intergenic | 30.0% | |
| AGAACGAGAATTAGTCAATT+AGG | + | chr8_3:58218583-58218602 | None:intergenic | 30.0% | |
| ATCTAACAAAGCTGAAGAAT+CGG | + | chr8_3:58218925-58218944 | None:intergenic | 30.0% | |
| !! | ATTCTTCAGCTTTGTTAGAT+TGG | - | chr8_3:58218925-58218944 | Msa1297730:intron | 30.0% |
| ATTGATGAAGTTGAAGAACT+TGG | - | chr8_3:58219125-58219144 | Msa1297730:CDS | 30.0% | |
| ! | TGTTTCAAAGAGTATAGACA+TGG | - | chr8_3:58219158-58219177 | Msa1297730:CDS | 30.0% |
| ! | TTTTTGTCACTCTCATTCCT+AGG | + | chr8_3:58216017-58216036 | None:intergenic | 35.0% |
| GTGACAAAAACCTTGAGAAA+TGG | - | chr8_3:58216027-58216046 | Msa1297730:three_prime_UTR | 35.0% | |
| TACGTTTCTTCCATTTCTCA+AGG | + | chr8_3:58216040-58216059 | None:intergenic | 35.0% | |
| !! | TTTTTGGTGAGAGGCTTAAA+AGG | - | chr8_3:58216066-58216085 | Msa1297730:three_prime_UTR | 35.0% |
| AAAGGTTTCCGTGTTTAGTT+TGG | - | chr8_3:58216084-58216103 | Msa1297730:exon | 35.0% | |
| GTAGTCTTCCAAACTAAACA+CGG | + | chr8_3:58216095-58216114 | None:intergenic | 35.0% | |
| !! | GTTTAGTTTGGAAGACTACA+TGG | - | chr8_3:58216096-58216115 | Msa1297730:CDS | 35.0% |
| !! | TTGTAATCTCTTTTGATGGC+AGG | - | chr8_3:58216533-58216552 | Msa1297730:CDS | 35.0% |
| !! | TGTAATCTCTTTTGATGGCA+GGG | - | chr8_3:58216534-58216553 | Msa1297730:CDS | 35.0% |
| TCTCAATTGTTGTGTTTGGA+AGG | - | chr8_3:58216923-58216942 | Msa1297730:intron | 35.0% | |
| GAAGAATTACGATTATGGTG+TGG | - | chr8_3:58216985-58217004 | Msa1297730:intron | 35.0% | |
| TCTTCACGACATTATCAACT+CGG | + | chr8_3:58217054-58217073 | None:intergenic | 35.0% | |
| !! | AGTTGATAATGTCGTGAAGA+TGG | - | chr8_3:58217054-58217073 | Msa1297730:intron | 35.0% |
| AGTATTTCCAAATTGGTCAG+GGG | - | chr8_3:58217138-58217157 | Msa1297730:intron | 35.0% | |
| TACCTTCTATAGATTTGGCT+AGG | + | chr8_3:58217201-58217220 | None:intergenic | 35.0% | |
| TATGTGTAGCATCAACACTT+TGG | - | chr8_3:58217605-58217624 | Msa1297730:intron | 35.0% | |
| ATCAACACTTTGGATGAAAG+AGG | - | chr8_3:58217615-58217634 | Msa1297730:intron | 35.0% | |
| ! | TGTCTGTTTTGTGATTGTGT+CGG | + | chr8_3:58217668-58217687 | None:intergenic | 35.0% |
| !! | TAAGACATTCTTTGAAGCAC+TGG | + | chr8_3:58217788-58217807 | None:intergenic | 35.0% |
| TTGTTTGAGAACAGAAATCC+AGG | - | chr8_3:58217962-58217981 | Msa1297730:CDS | 35.0% | |
| GAACTCAAATGTTATGTACC+TGG | + | chr8_3:58217983-58218002 | None:intergenic | 35.0% | |
| !!! | CCACTATTTTGACTAGACAT+AGG | + | chr8_3:58218087-58218106 | None:intergenic | 35.0% |
| CCTATGTCTAGTCAAAATAG+TGG | - | chr8_3:58218084-58218103 | Msa1297730:intron | 35.0% | |
| !! | ACTTTATGCAAGGAGGTATT+TGG | + | chr8_3:58218263-58218282 | None:intergenic | 35.0% |
| AAATACCTCCTTGCATAAAG+TGG | - | chr8_3:58218262-58218281 | Msa1297730:CDS | 35.0% | |
| ! | ACTAACACTAACAAGAGTAC+TGG | - | chr8_3:58218307-58218326 | Msa1297730:CDS | 35.0% |
| CACCAAACATGCATTTATTC+TGG | - | chr8_3:58218432-58218451 | Msa1297730:intron | 35.0% | |
| ACCCAGAATAAATGCATGTT+TGG | + | chr8_3:58218437-58218456 | None:intergenic | 35.0% | |
| ! | TTCACCCTATGAATTAGCTT+AGG | - | chr8_3:58218485-58218504 | Msa1297730:intron | 35.0% |
| ! | TCACCCTATGAATTAGCTTA+GGG | - | chr8_3:58218486-58218505 | Msa1297730:intron | 35.0% |
| AACCCCTAAGCTAATTCATA+GGG | + | chr8_3:58218492-58218511 | None:intergenic | 35.0% | |
| !!! | GCGTCTACTTTTTATACTGT+TGG | + | chr8_3:58218730-58218749 | None:intergenic | 35.0% |
| AGATTATCGGAGAGAATTTC+TGG | + | chr8_3:58218762-58218781 | None:intergenic | 35.0% | |
| CAATGCTTCACGAAGATTAT+CGG | + | chr8_3:58218775-58218794 | None:intergenic | 35.0% | |
| CTTACGTTCTTGTAGTTGTT+CGG | + | chr8_3:58218988-58219007 | None:intergenic | 35.0% | |
| AATGAAGCAAAAGCAGCAAA+AGG | + | chr8_3:58219071-58219090 | None:intergenic | 35.0% | |
| ATGAAGTTGAAGAACTTGGT+CGG | - | chr8_3:58219129-58219148 | Msa1297730:CDS | 35.0% | |
| ATTGAGTCTGATAAAGAGCA+AGG | - | chr8_3:58219255-58219274 | Msa1297730:CDS | 35.0% | |
| TCTAGGCCATCATGAACTTT+AGG | + | chr8_3:58215984-58216003 | None:intergenic | 40.0% | |
| AGTTCATGATGGCCTAGAAA+TGG | - | chr8_3:58215986-58216005 | Msa1297730:three_prime_UTR | 40.0% | |
| TCCTAGGTATAGCCATTTCT+AGG | + | chr8_3:58216001-58216020 | None:intergenic | 40.0% | |
| !!! | GTATGCATGTTTTTGGTGAG+AGG | - | chr8_3:58216057-58216076 | Msa1297730:three_prime_UTR | 40.0% |
| AGTTTGGAAGACTACATGGA+AGG | - | chr8_3:58216100-58216119 | Msa1297730:CDS | 40.0% | |
| GTGATCCATGCATTCAAAGT+TGG | - | chr8_3:58216146-58216165 | Msa1297730:CDS | 40.0% | |
| TGTTGGAGCCACTCTTTAAA+GGG | - | chr8_3:58216201-58216220 | Msa1297730:CDS | 40.0% | |
| ! | GATTGGCGAGAATGCTATTT+GGG | - | chr8_3:58216223-58216242 | Msa1297730:CDS | 40.0% |
| !! | GTAATCTCTTTTGATGGCAG+GGG | - | chr8_3:58216535-58216554 | Msa1297730:CDS | 40.0% |
| TTATGCAAAGGGCTGAATAG+AGG | - | chr8_3:58216563-58216582 | Msa1297730:CDS | 40.0% | |
| AAAGGGCTGAATAGAGGATT+GGG | - | chr8_3:58216569-58216588 | Msa1297730:CDS | 40.0% | |
| GATTGGGGACATTATTAGCA+GGG | - | chr8_3:58216585-58216604 | Msa1297730:CDS | 40.0% | |
| CTGCAATGAAAACAGCTTGA+AGG | + | chr8_3:58216658-58216677 | None:intergenic | 40.0% | |
| GGGAATGAACCTCATATATG+TGG | + | chr8_3:58216957-58216976 | None:intergenic | 40.0% | |
| CAATGGCTATGGTATAGAAG+CGG | + | chr8_3:58217087-58217106 | None:intergenic | 40.0% | |
| GAGACTCATGAAAAGGCAAA+TGG | + | chr8_3:58217116-58217135 | None:intergenic | 40.0% | |
| TCCACAGCTTTCAAACTTGA+AGG | - | chr8_3:58217175-58217194 | Msa1297730:intron | 40.0% | |
| GCTTACCAATGTTTCATCAG+TGG | + | chr8_3:58217407-58217426 | None:intergenic | 40.0% | |
| !! | AGTGTTGATGCTACACATAC+CGG | + | chr8_3:58217604-58217623 | None:intergenic | 40.0% |
| !!! | CGTTTTGTTTTGAACTGTGC+AGG | - | chr8_3:58217818-58217837 | Msa1297730:intron | 40.0% |
| TGACAGTACCTAAAATGCCT+TGG | + | chr8_3:58217864-58217883 | None:intergenic | 40.0% | |
| ! | TATACAGTGGTAGCTCTACA+TGG | - | chr8_3:58217939-58217958 | Msa1297730:CDS | 40.0% |
| AGCATCTCACCATTTGATGA+AGG | - | chr8_3:58218027-58218046 | Msa1297730:CDS | 40.0% | |
| AAAAGCTAATTTATGGGGGG+AGG | + | chr8_3:58218131-58218150 | None:intergenic | 40.0% | |
| TGTTAGTGTTAGTGCTTCCT+AGG | + | chr8_3:58218300-58218319 | None:intergenic | 40.0% | |
| !!! | GTGTCGATTTTTCAGTGTCA+GGG | + | chr8_3:58218339-58218358 | None:intergenic | 40.0% |
| ! | CACCCTATGAATTAGCTTAG+GGG | - | chr8_3:58218487-58218506 | Msa1297730:intron | 40.0% |
| CAACCCCTAAGCTAATTCAT+AGG | + | chr8_3:58218493-58218512 | None:intergenic | 40.0% | |
| !! | AGAGAATTTCTGGTGAGCAA+TGG | + | chr8_3:58218752-58218771 | None:intergenic | 40.0% |
| ! | GTGATTTTATGGCAGTGTTG+AGG | + | chr8_3:58218803-58218822 | None:intergenic | 40.0% |
| ! | GTTGTTAGCTTGGATGTCAT+TGG | + | chr8_3:58218847-58218866 | None:intergenic | 40.0% |
| ! | CTGTTCAGCTGATACACTTT+TGG | + | chr8_3:58218955-58218974 | None:intergenic | 40.0% |
| TGTATCAGCTGAACAGACAA+TGG | - | chr8_3:58218959-58218978 | Msa1297730:intron | 40.0% | |
| ! | TGCTTTTGCTTCATTGCTTG+TGG | - | chr8_3:58219076-58219095 | Msa1297730:CDS | 40.0% |
| TTCATTGCTTGTGGAAACTG+TGG | - | chr8_3:58219085-58219104 | Msa1297730:CDS | 40.0% | |
| !! | GAAACCAAGAGTTGATGTGT+TGG | - | chr8_3:58219205-58219224 | Msa1297730:CDS | 40.0% |
| TTGTCCAACACATCAACTCT+TGG | + | chr8_3:58219212-58219231 | None:intergenic | 40.0% | |
| GCCTAGAAATGGCTATACCT+AGG | - | chr8_3:58215997-58216016 | Msa1297730:three_prime_UTR | 45.0% | |
| TTGGAAGACTACATGGAAGG+TGG | - | chr8_3:58216103-58216122 | Msa1297730:CDS | 45.0% | |
| TGGAAGACTACATGGAAGGT+GGG | - | chr8_3:58216104-58216123 | Msa1297730:CDS | 45.0% | |
| ATGCATGGATCACCCTTCTT+GGG | + | chr8_3:58216139-58216158 | None:intergenic | 45.0% | |
| AATGCATGGATCACCCTTCT+TGG | + | chr8_3:58216140-58216159 | None:intergenic | 45.0% | |
| CTGTTGGAGCCACTCTTTAA+AGG | - | chr8_3:58216200-58216219 | Msa1297730:CDS | 45.0% | |
| ! | GAGCCACTCTTTAAAGGGAT+TGG | - | chr8_3:58216206-58216225 | Msa1297730:CDS | 45.0% |
| ! | TCGCCAATCCCTTTAAAGAG+TGG | + | chr8_3:58216212-58216231 | None:intergenic | 45.0% |
| ! | GGATTGGCGAGAATGCTATT+TGG | - | chr8_3:58216222-58216241 | Msa1297730:CDS | 45.0% |
| AATTGCAGCCGCAACATCAA+AGG | + | chr8_3:58216421-58216440 | None:intergenic | 45.0% | |
| ! | TGATGTTGCGGCTGCAATTT+TGG | - | chr8_3:58216422-58216441 | Msa1297730:CDS | 45.0% |
| CAGGGGCAACTTTATGCAAA+GGG | - | chr8_3:58216552-58216571 | Msa1297730:CDS | 45.0% | |
| CAAAGGGCTGAATAGAGGAT+TGG | - | chr8_3:58216568-58216587 | Msa1297730:CDS | 45.0% | |
| AAGGGCTGAATAGAGGATTG+GGG | - | chr8_3:58216570-58216589 | Msa1297730:CDS | 45.0% | |
| GGATTGGGGACATTATTAGC+AGG | - | chr8_3:58216584-58216603 | Msa1297730:CDS | 45.0% | |
| GATCTGCAGCCACATATATG+AGG | - | chr8_3:58216945-58216964 | Msa1297730:intron | 45.0% | |
| CGCTTCTATACCATAGCCAT+TGG | - | chr8_3:58217085-58217104 | Msa1297730:intron | 45.0% | |
| AGATCTTCCCCTGACCAATT+TGG | + | chr8_3:58217148-58217167 | None:intergenic | 45.0% | |
| ! | GCCTTCAAGTTTGAAAGCTG+TGG | + | chr8_3:58217179-58217198 | None:intergenic | 45.0% |
| GGCCTAGCCAAATCTATAGA+AGG | - | chr8_3:58217196-58217215 | Msa1297730:intron | 45.0% | |
| !! | CTTTGGATGAAAGAGGTGTC+TGG | - | chr8_3:58217622-58217641 | Msa1297730:intron | 45.0% |
| TGTCGGACACAGACACATAT+CGG | + | chr8_3:58217651-58217670 | None:intergenic | 45.0% | |
| !! | TTTGAAGCACTGGTGCTTTG+AGG | + | chr8_3:58217778-58217797 | None:intergenic | 45.0% |
| TGAACTGTGCAGGCATTACA+TGG | - | chr8_3:58217828-58217847 | Msa1297730:intron | 45.0% | |
| TGCAGGCATTACATGGAAGT+TGG | - | chr8_3:58217835-58217854 | Msa1297730:intron | 45.0% | |
| GCAGGCATTACATGGAAGTT+GGG | - | chr8_3:58217836-58217855 | Msa1297730:intron | 45.0% | |
| GGAACTGTTCTTCGCCAATT+CGG | - | chr8_3:58217915-58217934 | Msa1297730:intron | 45.0% | |
| GAACTGTTCTTCGCCAATTC+GGG | - | chr8_3:58217916-58217935 | Msa1297730:intron | 45.0% | |
| CTACCACTGTATACCCGAAT+TGG | + | chr8_3:58217932-58217951 | None:intergenic | 45.0% | |
| TACCTCCTTGCATAAAGTGG+AGG | - | chr8_3:58218265-58218284 | Msa1297730:CDS | 45.0% | |
| TGTTAGTGCTTCCTAGGTGA+AGG | + | chr8_3:58218294-58218313 | None:intergenic | 45.0% | |
| !!! | GGTGTCGATTTTTCAGTGTC+AGG | + | chr8_3:58218340-58218359 | None:intergenic | 45.0% |
| AACAGGACTCGAACAGATCT+CGG | + | chr8_3:58218651-58218670 | None:intergenic | 45.0% | |
| ATCTGTTCGAGTCCTGTTCA+AGG | - | chr8_3:58218653-58218672 | Msa1297730:intron | 45.0% | |
| TTATGCAAGGGTCCTTGAAC+AGG | + | chr8_3:58218668-58218687 | None:intergenic | 45.0% | |
| !! | CTGCTGCTAGTCTTATGCAA+GGG | + | chr8_3:58218680-58218699 | None:intergenic | 45.0% |
| !! | TCTGCTGCTAGTCTTATGCA+AGG | + | chr8_3:58218681-58218700 | None:intergenic | 45.0% |
| TTGCATAAGACTAGCAGCAG+AGG | - | chr8_3:58218680-58218699 | Msa1297730:CDS | 45.0% | |
| ! | GAGTCGTGGCTGTGATTTTA+TGG | + | chr8_3:58218814-58218833 | None:intergenic | 45.0% |
| CTTTCCATGAGAGGAAGCTA+TGG | + | chr8_3:58218880-58218899 | None:intergenic | 45.0% | |
| GCAAAAGCAGCAAAAGGCAA+TGG | + | chr8_3:58219065-58219084 | None:intergenic | 45.0% | |
| AGTTGAAGAACTTGGTCGGT+TGG | - | chr8_3:58219133-58219152 | Msa1297730:CDS | 45.0% | |
| GACAACCATTTCCCTTCTCA+TGG | - | chr8_3:58219227-58219246 | Msa1297730:CDS | 45.0% | |
| AACCATTTCCCTTCTCATGG+AGG | - | chr8_3:58219230-58219249 | Msa1297730:CDS | 45.0% | |
| CTCAATCTCCTCCATGAGAA+GGG | + | chr8_3:58219241-58219260 | None:intergenic | 45.0% | |
| ACTCAATCTCCTCCATGAGA+AGG | + | chr8_3:58219242-58219261 | None:intergenic | 45.0% | |
| !! | TAATTAAAAAATATTTAAAG+TGG | + | chr8_3:58217708-58217727 | None:intergenic | 5.0% |
| !! | ATAAAATTTATCAAATTAAA+AGG | + | chr8_3:58218619-58218638 | None:intergenic | 5.0% |
| TGGGACATGATGACCCAAGA+AGG | - | chr8_3:58216123-58216142 | Msa1297730:CDS | 50.0% | |
| GGGACATGATGACCCAAGAA+GGG | - | chr8_3:58216124-58216143 | Msa1297730:CDS | 50.0% | |
| GAATTCGAACACCACGACGA+CGG | + | chr8_3:58216258-58216277 | None:intergenic | 50.0% | |
| ! | GTTGCGGCTGCAATTTTGGA+CGG | - | chr8_3:58216426-58216445 | Msa1297730:CDS | 50.0% |
| GCAGGGGCAACTTTATGCAA+AGG | - | chr8_3:58216551-58216570 | Msa1297730:CDS | 50.0% | |
| ACACTCAACGCAACTGTACG+TGG | - | chr8_3:58216764-58216783 | Msa1297730:intron | 50.0% | |
| AATGGCACAGCCAATGGCTA+TGG | + | chr8_3:58217098-58217117 | None:intergenic | 50.0% | |
| AAGGCAAATGGCACAGCCAA+TGG | + | chr8_3:58217104-58217123 | None:intergenic | 50.0% | |
| GCTTGACTTAGGGCACATGT+TGG | + | chr8_3:58217474-58217493 | None:intergenic | 50.0% | |
| GGCACCTAACTTTCTACACC+AGG | - | chr8_3:58217578-58217597 | Msa1297730:intron | 50.0% | |
| CCTAACTTTCTACACCAGGC+CGG | - | chr8_3:58217582-58217601 | Msa1297730:intron | 50.0% | |
| TACATGGAAGTTGGGAGCCA+AGG | - | chr8_3:58217844-58217863 | Msa1297730:intron | 50.0% | |
| !! | GTTGGGAGCCAAGGCATTTT+AGG | - | chr8_3:58217853-58217872 | Msa1297730:intron | 50.0% |
| TCGCCAATTCGGGTATACAG+TGG | - | chr8_3:58217926-58217945 | Msa1297730:intron | 50.0% | |
| TAGTGCTTCCTAGGTGAAGG+TGG | + | chr8_3:58218291-58218310 | None:intergenic | 50.0% | |
| !! | GTTTGGTGTCTGAGACGTGT+TGG | + | chr8_3:58218420-58218439 | None:intergenic | 50.0% |
| TCACAGCCACGACTCTTCTT+AGG | - | chr8_3:58218819-58218838 | Msa1297730:intron | 50.0% | |
| TTGGAGCCTAAGAAGAGTCG+TGG | + | chr8_3:58218828-58218847 | None:intergenic | 50.0% | |
| TGGCGAGCATGTTGTTAGCT+TGG | + | chr8_3:58218857-58218876 | None:intergenic | 50.0% | |
| TCCATGAGAGGAAGCTATGG+TGG | + | chr8_3:58218877-58218896 | None:intergenic | 50.0% | |
| GAGTGAGCTCTTTCCATGAG+AGG | + | chr8_3:58218889-58218908 | None:intergenic | 50.0% | |
| TGTGGAAACTGTGGCGAAAC+TGG | - | chr8_3:58219094-58219113 | Msa1297730:CDS | 50.0% | |
| CTCCTCCATGAGAAGGGAAA+TGG | + | chr8_3:58219235-58219254 | None:intergenic | 50.0% | |
| GTGGTGTTCGAATTCACCGC+AGG | - | chr8_3:58216263-58216282 | Msa1297730:CDS | 55.0% | |
| CCGGCCTGGTGTAGAAAGTT+AGG | + | chr8_3:58217585-58217604 | None:intergenic | 55.0% | |
| TGATGCTACACATACCGGCC+TGG | + | chr8_3:58217599-58217618 | None:intergenic | 55.0% | |
| GGCCTCCACTTTATGCAAGG+AGG | + | chr8_3:58218270-58218289 | None:intergenic | 55.0% | |
| GGTGGCCTCCACTTTATGCA+AGG | + | chr8_3:58218273-58218292 | None:intergenic | 55.0% | |
| GCCACCATAGCTTCCTCTCA+TGG | - | chr8_3:58218873-58218892 | Msa1297730:intron | 55.0% | |
| !! | GCACTGGTGCTTTGAGGCAC+TGG | + | chr8_3:58217772-58217791 | None:intergenic | 60.0% |
| AGTGGAGGCCACCTTCACCT+AGG | - | chr8_3:58218280-58218299 | Msa1297730:CDS | 60.0% | |
| GGCTGTCATGACCGTCGTCG+TGG | - | chr8_3:58216244-58216263 | Msa1297730:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 58215975 | 58219376 | 58215975 | ID=Msa1297730;Name=Msa1297730 |
| chr8_3 | mRNA | 58215975 | 58219376 | 58215975 | ID=Msa1297730-mRNA-1;Parent=Msa1297730;Name=Msa1297730-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|1|0.66|1|1|1|6|117|534 |
| chr8_3 | exon | 58215975 | 58216706 | 58215975 | ID=Msa1297730-mRNA-1:exon:16687;Parent=Msa1297730-mRNA-1 |
| chr8_3 | exon | 58217368 | 58217511 | 58217368 | ID=Msa1297730-mRNA-1:exon:16686;Parent=Msa1297730-mRNA-1 |
| chr8_3 | exon | 58217931 | 58218052 | 58217931 | ID=Msa1297730-mRNA-1:exon:16685;Parent=Msa1297730-mRNA-1 |
| chr8_3 | exon | 58218134 | 58218406 | 58218134 | ID=Msa1297730-mRNA-1:exon:16684;Parent=Msa1297730-mRNA-1 |
| chr8_3 | exon | 58218656 | 58218796 | 58218656 | ID=Msa1297730-mRNA-1:exon:16683;Parent=Msa1297730-mRNA-1 |
| chr8_3 | exon | 58219067 | 58219376 | 58219067 | ID=Msa1297730-mRNA-1:exon:16682;Parent=Msa1297730-mRNA-1 |
| chr8_3 | CDS | 58219067 | 58219376 | 58219067 | ID=Msa1297730-mRNA-1:cds;Parent=Msa1297730-mRNA-1 |
| chr8_3 | CDS | 58218656 | 58218796 | 58218656 | ID=Msa1297730-mRNA-1:cds;Parent=Msa1297730-mRNA-1 |
| chr8_3 | CDS | 58218134 | 58218406 | 58218134 | ID=Msa1297730-mRNA-1:cds;Parent=Msa1297730-mRNA-1 |
| chr8_3 | CDS | 58217931 | 58218052 | 58217931 | ID=Msa1297730-mRNA-1:cds;Parent=Msa1297730-mRNA-1 |
| chr8_3 | CDS | 58217368 | 58217511 | 58217368 | ID=Msa1297730-mRNA-1:cds;Parent=Msa1297730-mRNA-1 |
| chr8_3 | CDS | 58216092 | 58216706 | 58216092 | ID=Msa1297730-mRNA-1:cds;Parent=Msa1297730-mRNA-1 |
| chr8_3 | three_prime_UTR | 58215975 | 58216091 | 58215975 | ID=Msa1297730-mRNA-1:three_prime_utr;Parent=Msa1297730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
