Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205620 | XP_003608631.1 | 96.629 | 534 | 18 | 0 | 1 | 534 | 1 | 534 | 0.0 | 1072 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205620 | sp|O49696|ALMTC_ARATH | 61.593 | 565 | 155 | 9 | 1 | 519 | 1 | 549 | 0.0 | 663 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1205620 | Msa1226600 | 0.803650 | 3.150411e-49 | -8.615850e-47 |
| Msa1205620 | Msa1297730 | 0.993087 | 2.273284e-197 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205620 | MtrunA17_Chr4g0054741 | 90.637 | 534 | 50 | 0 | 1 | 534 | 1 | 534 | 0.0 | 968 |
| Msa1205620 | MtrunA17_Chr4g0054771 | 97.656 | 384 | 9 | 0 | 151 | 534 | 3 | 386 | 0.0 | 780 |
| Msa1205620 | MtrunA17_Chr1g0212201 | 57.063 | 538 | 217 | 4 | 9 | 534 | 1 | 536 | 0.0 | 629 |
| Msa1205620 | MtrunA17_Chr1g0212251 | 59.551 | 534 | 195 | 7 | 16 | 534 | 5 | 532 | 0.0 | 620 |
| Msa1205620 | MtrunA17_Chr5g0400471 | 70.323 | 465 | 97 | 6 | 105 | 532 | 3 | 463 | 0.0 | 613 |
| Msa1205620 | MtrunA17_Chr1g0212291 | 57.974 | 533 | 206 | 5 | 16 | 533 | 6 | 535 | 0.0 | 597 |
| Msa1205620 | MtrunA17_Chr1g0188881 | 34.845 | 485 | 253 | 7 | 25 | 504 | 23 | 449 | 2.59e-95 | 298 |
| Msa1205620 | MtrunA17_Chr1g0188871 | 38.320 | 381 | 223 | 3 | 25 | 399 | 17 | 391 | 8.77e-90 | 283 |
| Msa1205620 | MtrunA17_Chr4g0025591 | 41.011 | 356 | 199 | 3 | 34 | 381 | 19 | 371 | 4.32e-87 | 276 |
| Msa1205620 | MtrunA17_Chr2g0321971 | 35.941 | 409 | 243 | 7 | 49 | 446 | 37 | 437 | 1.67e-81 | 261 |
| Msa1205620 | MtrunA17_Chr7g0267471 | 41.228 | 342 | 195 | 2 | 49 | 389 | 42 | 378 | 5.10e-81 | 261 |
| Msa1205620 | MtrunA17_Chr6g0484691 | 32.331 | 532 | 302 | 10 | 15 | 505 | 62 | 576 | 8.52e-81 | 264 |
| Msa1205620 | MtrunA17_Chr4g0054761 | 94.040 | 151 | 9 | 0 | 1 | 151 | 1 | 151 | 2.78e-78 | 243 |
| Msa1205620 | MtrunA17_Chr7g0259731 | 38.261 | 345 | 194 | 6 | 54 | 389 | 61 | 395 | 1.45e-76 | 248 |
| Msa1205620 | MtrunA17_Chr1g0210101 | 33.753 | 477 | 291 | 10 | 48 | 505 | 112 | 582 | 1.47e-75 | 249 |
| Msa1205620 | MtrunA17_Chr8g0390931 | 33.401 | 494 | 283 | 9 | 49 | 505 | 59 | 543 | 6.22e-75 | 247 |
| Msa1205620 | MtrunA17_Chr2g0321961 | 38.081 | 344 | 209 | 3 | 49 | 391 | 37 | 377 | 2.01e-72 | 238 |
| Msa1205620 | MtrunA17_Chr8g0390921 | 30.755 | 543 | 320 | 12 | 4 | 505 | 26 | 553 | 6.57e-72 | 239 |
| Msa1205620 | MtrunA17_Chr8g0390901 | 31.207 | 439 | 264 | 8 | 103 | 505 | 9 | 445 | 2.07e-61 | 209 |
| Msa1205620 | MtrunA17_Chr5g0400481 | 64.348 | 115 | 33 | 2 | 1 | 107 | 1 | 115 | 5.04e-44 | 151 |
| Msa1205620 | MtrunA17_Chr8g0390911 | 37.895 | 95 | 47 | 2 | 11 | 104 | 37 | 120 | 1.39e-15 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205620 | AT4G17970.1 | 61.593 | 565 | 155 | 9 | 1 | 519 | 1 | 549 | 0.0 | 663 |
| Msa1205620 | AT5G46610.1 | 58.716 | 545 | 189 | 8 | 1 | 519 | 1 | 535 | 0.0 | 614 |
| Msa1205620 | AT5G46600.1 | 57.198 | 521 | 180 | 7 | 19 | 506 | 16 | 526 | 0.0 | 587 |
| Msa1205620 | AT5G46610.2 | 55.229 | 545 | 184 | 9 | 1 | 519 | 1 | 511 | 0.0 | 560 |
| Msa1205620 | AT5G46610.3 | 52.477 | 545 | 176 | 9 | 1 | 519 | 1 | 488 | 1.29e-180 | 517 |
| Msa1205620 | AT4G00910.1 | 35.928 | 501 | 262 | 10 | 10 | 505 | 21 | 467 | 7.04e-99 | 308 |
| Msa1205620 | AT1G08440.1 | 40.698 | 344 | 199 | 3 | 49 | 389 | 13 | 354 | 2.87e-84 | 270 |
| Msa1205620 | AT1G08430.1 | 38.905 | 347 | 204 | 4 | 49 | 389 | 13 | 357 | 4.94e-78 | 254 |
| Msa1205620 | AT3G11680.2 | 38.786 | 379 | 221 | 4 | 17 | 389 | 2 | 375 | 2.52e-76 | 249 |
| Msa1205620 | AT3G11680.1 | 39.237 | 367 | 209 | 4 | 32 | 389 | 12 | 373 | 3.33e-76 | 249 |
| Msa1205620 | AT3G18440.1 | 32.200 | 500 | 299 | 11 | 43 | 505 | 73 | 569 | 7.70e-75 | 248 |
| Msa1205620 | AT1G18420.1 | 32.213 | 506 | 289 | 11 | 46 | 505 | 80 | 577 | 1.81e-74 | 247 |
| Msa1205620 | AT1G18420.2 | 32.072 | 502 | 287 | 11 | 50 | 505 | 1 | 494 | 6.66e-73 | 240 |
| Msa1205620 | AT2G27240.2 | 38.329 | 347 | 203 | 3 | 49 | 389 | 13 | 354 | 4.05e-72 | 238 |
| Msa1205620 | AT2G27240.1 | 36.141 | 368 | 208 | 4 | 49 | 389 | 13 | 380 | 8.10e-69 | 230 |
| Msa1205620 | AT2G17470.1 | 31.959 | 485 | 296 | 13 | 49 | 505 | 31 | 509 | 7.09e-67 | 226 |
| Msa1205620 | AT2G17470.2 | 31.959 | 485 | 296 | 13 | 49 | 505 | 53 | 531 | 1.02e-66 | 226 |
| Msa1205620 | AT1G68600.1 | 30.451 | 532 | 323 | 17 | 12 | 505 | 7 | 529 | 2.01e-66 | 224 |
| Msa1205620 | AT1G25480.1 | 31.148 | 488 | 302 | 11 | 48 | 505 | 58 | 541 | 3.41e-63 | 216 |
| Msa1205620 | AT4G17585.1 | 46.032 | 126 | 63 | 2 | 17 | 141 | 11 | 132 | 2.65e-22 | 94.0 |
Find 115 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGGAGAAATTGAAGTTTC+TGG | 0.169451 | 8_1:+61947791 | Msa1205620:CDS |
| CTGTTGGAGCCACTCTTTAA+AGG | 0.199252 | 8_1:+61946672 | Msa1205620:CDS |
| AGATTATCGGAGAGAATTTC+TGG | 0.215757 | 8_1:-61949227 | None:intergenic |
| CTGTTCAGCTGATACACTTT+TGG | 0.231447 | 8_1:-61949420 | None:intergenic |
| CAAAGGTTATAAAGCAGTTT+TGG | 0.231701 | 8_1:+61947844 | Msa1205620:CDS |
| TCGTAATTCTTCTTTATATA+GGG | 0.249245 | 8_1:-61947446 | None:intergenic |
| AGATCTTCCCCTGACCAATT+TGG | 0.256707 | 8_1:-61947617 | None:intergenic |
| TCTAGGCCATCATGAACTTT+AGG | 0.261202 | 8_1:-61946453 | None:intergenic |
| GGATTGGCGAGAATGCTATT+TGG | 0.281542 | 8_1:+61946694 | Msa1205620:CDS |
| TTACATACCTTCTATAGATT+TGG | 0.283097 | 8_1:-61947675 | None:intergenic |
| ATTCTTCAGCTTTGTTAGAT+TGG | 0.285201 | 8_1:+61949393 | Msa1205620:CDS |
| TGTGGAAACTGTGGCGAAAC+TGG | 0.305124 | 8_1:+61949562 | Msa1205620:CDS |
| CAATGCTTCACGAAGATTAT+CGG | 0.311198 | 8_1:-61949240 | None:intergenic |
| AATGCATGGATCACCCTTCT+TGG | 0.318870 | 8_1:-61946609 | None:intergenic |
| TCCTAGGTATAGCCATTTCT+AGG | 0.327354 | 8_1:-61946470 | None:intergenic |
| ATCGTAATTCTTCTTTATAT+AGG | 0.334565 | 8_1:-61947447 | None:intergenic |
| GTCTCTTAGTATTTCCAAAT+TGG | 0.335490 | 8_1:+61947603 | Msa1205620:CDS |
| ATAAAGAAGAATTACGATTA+TGG | 0.345300 | 8_1:+61947452 | Msa1205620:CDS |
| GAACTGTTCTTCGCCAATTC+GGG | 0.355284 | 8_1:+61948384 | Msa1205620:CDS |
| AAAGGTTTCCGTGTTTAGTT+TGG | 0.365423 | 8_1:+61946556 | Msa1205620:CDS |
| TCCACAGCTTTCAAACTTGA+AGG | 0.368733 | 8_1:+61947647 | Msa1205620:CDS |
| TGTTGGAGCCACTCTTTAAA+GGG | 0.374070 | 8_1:+61946673 | Msa1205620:CDS |
| TTAGTATTTCCAAATTGGTC+AGG | 0.376995 | 8_1:+61947608 | Msa1205620:CDS |
| GATTGGCGAGAATGCTATTT+GGG | 0.389656 | 8_1:+61946695 | Msa1205620:CDS |
| GATTATGTTGCAAATGAATC+TGG | 0.397818 | 8_1:+61947098 | Msa1205620:CDS |
| GGAACTGTTCTTCGCCAATT+CGG | 0.400591 | 8_1:+61948383 | Msa1205620:CDS |
| GTTGTTAGCTTGGATGTCAT+TGG | 0.409141 | 8_1:-61949312 | None:intergenic |
| CTTACGTTCTTGTAGTTGTT+CGG | 0.413521 | 8_1:-61949453 | None:intergenic |
| AAAGGGCTGAATAGAGGATT+GGG | 0.415501 | 8_1:+61947041 | Msa1205620:CDS |
| CTACCACTGTATACCCGAAT+TGG | 0.422330 | 8_1:-61948397 | None:intergenic |
| TCACAGCCACGACTCTTCTT+AGG | 0.430174 | 8_1:+61949287 | Msa1205620:CDS |
| TTATGCAAGGGTCCTTGAAC+AGG | 0.434838 | 8_1:-61949133 | None:intergenic |
| GACAACCATTTCCCTTCTCA+TGG | 0.438588 | 8_1:+61949695 | Msa1205620:CDS |
| GGCCTAGCCAAATCTATAGA+AGG | 0.440228 | 8_1:+61947668 | Msa1205620:CDS |
| CTCCTCCATGAGAAGGGAAA+TGG | 0.440503 | 8_1:-61949700 | None:intergenic |
| TGCAGGCATTACATGGAAGT+TGG | 0.441399 | 8_1:+61948303 | Msa1205620:intron |
| GAGCCACTCTTTAAAGGGAT+TGG | 0.444594 | 8_1:+61946678 | Msa1205620:CDS |
| ATCTGTTCGAGTCCTGTTCA+AGG | 0.456363 | 8_1:+61949121 | Msa1205620:CDS |
| AGTTCATGATGGCCTAGAAA+TGG | 0.462800 | 8_1:+61946458 | Msa1205620:CDS |
| ATGCATGGATCACCCTTCTT+GGG | 0.463027 | 8_1:-61946608 | None:intergenic |
| CTGCAATGAAAACAGCTTGA+AGG | 0.467393 | 8_1:-61947127 | None:intergenic |
| ATCTAACAAAGCTGAAGAAT+CGG | 0.473243 | 8_1:-61949390 | None:intergenic |
| CAAAGGGCTGAATAGAGGAT+TGG | 0.475828 | 8_1:+61947040 | Msa1205620:CDS |
| TTATGCAAAGGGCTGAATAG+AGG | 0.477408 | 8_1:+61947035 | Msa1205620:CDS |
| GTGATCCATGCATTCAAAGT+TGG | 0.477949 | 8_1:+61946618 | Msa1205620:CDS |
| TGTCAACAGTATGTAAAAGT+TGG | 0.487010 | 8_1:+61948362 | Msa1205620:CDS |
| GCCACCATAGCTTCCTCTCA+TGG | 0.496583 | 8_1:+61949341 | Msa1205620:CDS |
| AACAGGACTCGAACAGATCT+CGG | 0.497650 | 8_1:-61949116 | None:intergenic |
| ATACTAAGAGACTCATGAAA+AGG | 0.499715 | 8_1:-61947592 | None:intergenic |
| GCAGGCATTACATGGAAGTT+GGG | 0.503722 | 8_1:+61948304 | Msa1205620:intron |
| AATGAAGCAAAAGCAGCAAA+AGG | 0.504471 | 8_1:-61949536 | None:intergenic |
| TACGTTTCTTCCATTTCTCA+AGG | 0.504702 | 8_1:-61946509 | None:intergenic |
| GGATTGGGGACATTATTAGC+AGG | 0.506171 | 8_1:+61947056 | Msa1205620:CDS |
| GCCTTCAAGTTTGAAAGCTG+TGG | 0.506523 | 8_1:-61947648 | None:intergenic |
| GTTTAGTTTGGAAGACTACA+TGG | 0.510665 | 8_1:+61946568 | Msa1205620:CDS |
| TACATGGAAGTTGGGAGCCA+AGG | 0.512610 | 8_1:+61948312 | Msa1205620:CDS |
| ATTGATGAAGTTGAAGAACT+TGG | 0.519020 | 8_1:+61949593 | Msa1205620:CDS |
| TGACAGTACCTAAAATGCCT+TGG | 0.520588 | 8_1:-61948329 | None:intergenic |
| ATAAACCAACTTTGAATGCA+TGG | 0.520687 | 8_1:-61946623 | None:intergenic |
| TGAACTGTGCAGGCATTACA+TGG | 0.522777 | 8_1:+61948296 | Msa1205620:intron |
| TTGTCCAACACATCAACTCT+TGG | 0.524411 | 8_1:-61949677 | None:intergenic |
| TAGTATTTCCAAATTGGTCA+GGG | 0.525758 | 8_1:+61947609 | Msa1205620:CDS |
| AATGGCACAGCCAATGGCTA+TGG | 0.528827 | 8_1:-61947567 | None:intergenic |
| TGGCGAGCATGTTGTTAGCT+TGG | 0.536847 | 8_1:-61949322 | None:intergenic |
| CGCTTCTATACCATAGCCAT+TGG | 0.538092 | 8_1:+61947557 | Msa1205620:CDS |
| CTCAATCTCCTCCATGAGAA+GGG | 0.539709 | 8_1:-61949706 | None:intergenic |
| AAGGCAAATGGCACAGCCAA+TGG | 0.540672 | 8_1:-61947573 | None:intergenic |
| TCTGCTGCTAGTCTTATGCA+AGG | 0.540766 | 8_1:-61949146 | None:intergenic |
| AGTTGATAATGTCGTGAAGA+TGG | 0.541232 | 8_1:+61947526 | Msa1205620:CDS |
| GCTTACCAATGTTTCATCAG+TGG | 0.542200 | 8_1:-61947876 | None:intergenic |
| AAAATCCACTGATGAAACAT+TGG | 0.545294 | 8_1:+61947871 | Msa1205620:CDS |
| GAGACTCATGAAAAGGCAAA+TGG | 0.547631 | 8_1:-61947585 | None:intergenic |
| TGGGACATGATGACCCAAGA+AGG | 0.548075 | 8_1:+61946595 | Msa1205620:CDS |
| AGTTGAAGAACTTGGTCGGT+TGG | 0.550930 | 8_1:+61949601 | Msa1205620:CDS |
| CAGGGGCAACTTTATGCAAA+GGG | 0.551257 | 8_1:+61947024 | Msa1205620:intron |
| GATCTGCAGCCACATATATG+AGG | 0.555277 | 8_1:+61947417 | Msa1205620:CDS |
| ACTCAATCTCCTCCATGAGA+AGG | 0.555510 | 8_1:-61949707 | None:intergenic |
| TTGTTTGAGAACAGAAATCC+AGG | 0.562615 | 8_1:+61948430 | Msa1205620:CDS |
| TATACAGTGGTAGCTCTACA+TGG | 0.568140 | 8_1:+61948407 | Msa1205620:CDS |
| GCAGGGGCAACTTTATGCAA+AGG | 0.574504 | 8_1:+61947023 | Msa1205620:intron |
| CTTTCCATGAGAGGAAGCTA+TGG | 0.576616 | 8_1:-61949345 | None:intergenic |
| TGTATCAGCTGAACAGACAA+TGG | 0.578408 | 8_1:+61949427 | Msa1205620:CDS |
| GCAAAAGCAGCAAAAGGCAA+TGG | 0.580036 | 8_1:-61949530 | None:intergenic |
| GAGTGAGCTCTTTCCATGAG+AGG | 0.581421 | 8_1:-61949354 | None:intergenic |
| GGGAATGAACCTCATATATG+TGG | 0.581767 | 8_1:-61947426 | None:intergenic |
| ATGATTCCTAAAGTTCATGA+TGG | 0.582610 | 8_1:+61946447 | Msa1205620:CDS |
| GCCTAGAAATGGCTATACCT+AGG | 0.588780 | 8_1:+61946469 | Msa1205620:CDS |
| AGAGAATTTCTGGTGAGCAA+TGG | 0.596330 | 8_1:-61949217 | None:intergenic |
| TCGCCAATCCCTTTAAAGAG+TGG | 0.596561 | 8_1:-61946681 | None:intergenic |
| GATTGGGGACATTATTAGCA+GGG | 0.597708 | 8_1:+61947057 | Msa1205620:CDS |
| TACCTTCTATAGATTTGGCT+AGG | 0.600939 | 8_1:-61947670 | None:intergenic |
| TTCATTGCTTGTGGAAACTG+TGG | 0.606323 | 8_1:+61949553 | Msa1205620:CDS |
| AGTTTGGAAGACTACATGGA+AGG | 0.606777 | 8_1:+61946572 | Msa1205620:CDS |
| TGGAAGACTACATGGAAGGT+GGG | 0.611396 | 8_1:+61946576 | Msa1205620:CDS |
| TTGGAAGACTACATGGAAGG+TGG | 0.614695 | 8_1:+61946575 | Msa1205620:CDS |
| CTGCTGCTAGTCTTATGCAA+GGG | 0.615929 | 8_1:-61949145 | None:intergenic |
| ATGAAGTTGAAGAACTTGGT+CGG | 0.621502 | 8_1:+61949597 | Msa1205620:CDS |
| GGGACATGATGACCCAAGAA+GGG | 0.622433 | 8_1:+61946596 | Msa1205620:CDS |
| TCCATGAGAGGAAGCTATGG+TGG | 0.626566 | 8_1:-61949342 | None:intergenic |
| TGTGATGATTCAATATACAA+AGG | 0.645562 | 8_1:+61947827 | Msa1205620:CDS |
| AACCATTTCCCTTCTCATGG+AGG | 0.646179 | 8_1:+61949698 | Msa1205620:CDS |
| AGTATTTCCAAATTGGTCAG+GGG | 0.650407 | 8_1:+61947610 | Msa1205620:CDS |
| GAAACCAAGAGTTGATGTGT+TGG | 0.651294 | 8_1:+61949673 | Msa1205620:CDS |
| TTGGAGCCTAAGAAGAGTCG+TGG | 0.653969 | 8_1:-61949293 | None:intergenic |
| TTGCATAAGACTAGCAGCAG+AGG | 0.655213 | 8_1:+61949148 | Msa1205620:CDS |
| TCTTCACGACATTATCAACT+CGG | 0.657801 | 8_1:-61947523 | None:intergenic |
| GAAGAATTACGATTATGGTG+TGG | 0.658310 | 8_1:+61947457 | Msa1205620:CDS |
| GTGGTGTTCGAATTCACCGC+AGG | 0.662552 | 8_1:+61946735 | Msa1205620:CDS |
| TCGCCAATTCGGGTATACAG+TGG | 0.664124 | 8_1:+61948394 | Msa1205620:CDS |
| GAATTCGAACACCACGACGA+CGG | 0.674271 | 8_1:-61946727 | None:intergenic |
| AAGGGCTGAATAGAGGATTG+GGG | 0.679447 | 8_1:+61947042 | Msa1205620:CDS |
| GGCTGTCATGACCGTCGTCG+TGG | 0.681791 | 8_1:+61946716 | Msa1205620:CDS |
| CAATGGCTATGGTATAGAAG+CGG | 0.684555 | 8_1:-61947556 | None:intergenic |
| GTAGTCTTCCAAACTAAACA+CGG | 0.700142 | 8_1:-61946564 | None:intergenic |
| TGTTTCAAAGAGTATAGACA+TGG | 0.707293 | 8_1:+61949626 | Msa1205620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATTTTTTAATTATTAT+TGG | + | chr8_1:61948180-61948199 | Msa1205620:intron | 0.0% |
| !!! | TGAGATAAAAAAAATTATTT+TGG | - | chr8_1:61947380-61947399 | None:intergenic | 10.0% |
| !!! | AATTATTCATAAATCTTTTT+TGG | + | chr8_1:61947973-61947992 | Msa1205620:intron | 10.0% |
| !!! | TTAATTTTTGAAATCATTAT+TGG | - | chr8_1:61948829-61948848 | None:intergenic | 10.0% |
| !!! | TCTATCATAATTTTAAATTG+CGG | - | chr8_1:61946927-61946946 | None:intergenic | 15.0% |
| !! | CACAAAATTGTATATTTATA+TGG | + | chr8_1:61947288-61947307 | Msa1205620:intron | 15.0% |
| !!! | TATAACAACATTTTATTGTA+CGG | + | chr8_1:61947733-61947752 | Msa1205620:intron | 15.0% |
| !! | AATTTCAAAAGCTAATTTAT+GGG | - | chr8_1:61948605-61948624 | None:intergenic | 15.0% |
| !!! | ATCTTAAAATTTGAATTTTG+AGG | - | chr8_1:61948634-61948653 | None:intergenic | 15.0% |
| !!! | TCAAAATTCAAATTTTAAGA+TGG | + | chr8_1:61948633-61948652 | Msa1205620:intron | 15.0% |
| !!! | TGTATTTTTCTACAATATCA+AGG | - | chr8_1:61946813-61946832 | None:intergenic | 20.0% |
| !! | ATAGATAGATAGATAGTATA+AGG | + | chr8_1:61946965-61946984 | Msa1205620:intron | 20.0% |
| !!! | TAATTTGTAATCTCTTTTGA+TGG | + | chr8_1:61947001-61947020 | Msa1205620:intron | 20.0% |
| !! | TCGTAATTCTTCTTTATATA+GGG | - | chr8_1:61947449-61947468 | None:intergenic | 20.0% |
| !! | ATCGTAATTCTTCTTTATAT+AGG | - | chr8_1:61947450-61947469 | None:intergenic | 20.0% |
| !! | ATAAAGAAGAATTACGATTA+TGG | + | chr8_1:61947452-61947471 | Msa1205620:CDS | 20.0% |
| !!! | ATATTTAAAGTGGTTGAATA+TGG | - | chr8_1:61948166-61948185 | None:intergenic | 20.0% |
| !! | ATTTCAAAAGCTAATTTATG+GGG | - | chr8_1:61948604-61948623 | None:intergenic | 20.0% |
| !! | GAATTTCAAAAGCTAATTTA+TGG | - | chr8_1:61948606-61948625 | None:intergenic | 20.0% |
| !!! | TAATTACAATTTTACTCATC+TGG | - | chr8_1:61949490-61949509 | None:intergenic | 20.0% |
| !! | TGTATCATTTCTTTTTCTGT+TGG | + | chr8_1:61946656-61946675 | Msa1205620:CDS | 25.0% |
| ! | AGTTTCTAACTAAACTCAAA+TGG | + | chr8_1:61946766-61946785 | Msa1205620:intron | 25.0% |
| ! | TTATAGTTGCTTATAGTTGA+AGG | + | chr8_1:61946859-61946878 | Msa1205620:intron | 25.0% |
| ! | AGATAGATAGTATAAGGTTA+AGG | + | chr8_1:61946971-61946990 | Msa1205620:intron | 25.0% |
| ! | TGTGATGTTGAAATAACATT+AGG | - | chr8_1:61947182-61947201 | None:intergenic | 25.0% |
| ! | GAATTACTTCTTAAAATACC+AGG | - | chr8_1:61947346-61947365 | None:intergenic | 25.0% |
| !!! | AATTATTTTGGTTACAGTTG+AGG | - | chr8_1:61947368-61947387 | None:intergenic | 25.0% |
| ! | TTTATCTCAATTGTTGTGTT+TGG | + | chr8_1:61947391-61947410 | Msa1205620:intron | 25.0% |
| ! | TTACATACCTTCTATAGATT+TGG | - | chr8_1:61947678-61947697 | None:intergenic | 25.0% |
| ! | TTTACAACACATAGTTTCAA+AGG | + | chr8_1:61947700-61947719 | Msa1205620:intron | 25.0% |
| !!! | TGTGTCAGTGAATATTTTAA+TGG | + | chr8_1:61947773-61947792 | Msa1205620:CDS | 25.0% |
| ! | TGTGATGATTCAATATACAA+AGG | + | chr8_1:61947827-61947846 | Msa1205620:CDS | 25.0% |
| ! | ATGAATCAAAACAAGATGAA+TGG | - | chr8_1:61947901-61947920 | None:intergenic | 25.0% |
| !! | ATTTAGAATTGCTTGACTTA+GGG | - | chr8_1:61947956-61947975 | None:intergenic | 25.0% |
| !! | AATTTAGAATTGCTTGACTT+AGG | - | chr8_1:61947957-61947976 | None:intergenic | 25.0% |
| ! | ATCAGTTGTTAATTAGCATA+GGG | + | chr8_1:61948029-61948048 | Msa1205620:intron | 25.0% |
| ! | GTTCAAAACAAAACGATTTA+AGG | - | chr8_1:61948281-61948300 | None:intergenic | 25.0% |
| ! | TAACATTATCCTTCATCAAA+TGG | - | chr8_1:61948507-61948526 | None:intergenic | 25.0% |
| ! | CAAAATAGTGGTTATATCAT+AGG | + | chr8_1:61948564-61948583 | Msa1205620:intron | 25.0% |
| ! | TTTCAAAAGCTAATTTATGG+GGG | - | chr8_1:61948603-61948622 | None:intergenic | 25.0% |
| ATGATTCCTAAAGTTCATGA+TGG | + | chr8_1:61946447-61946466 | Msa1205620:CDS | 30.0% | |
| ! | AAGAAACGTATGCATGTTTT+TGG | + | chr8_1:61946522-61946541 | Msa1205620:CDS | 30.0% |
| ATAAACCAACTTTGAATGCA+TGG | - | chr8_1:61946626-61946645 | None:intergenic | 30.0% | |
| TAGAAACTGATATATACCTG+CGG | - | chr8_1:61946754-61946773 | None:intergenic | 30.0% | |
| TTTCAAAACCTTTGATGTTG+CGG | + | chr8_1:61946882-61946901 | Msa1205620:intron | 30.0% | |
| GATTATGTTGCAAATGAATC+TGG | + | chr8_1:61947098-61947117 | Msa1205620:CDS | 30.0% | |
| ! | GCAGTTGCAGTTTTTATAAT+AGG | + | chr8_1:61947146-61947165 | Msa1205620:CDS | 30.0% |
| !! | ATTTTGACAACATATGTCGT+CGG | - | chr8_1:61947317-61947336 | None:intergenic | 30.0% |
| TGTTGTCAAAATATCATTCC+TGG | + | chr8_1:61947325-61947344 | Msa1205620:intron | 30.0% | |
| ATACTAAGAGACTCATGAAA+AGG | - | chr8_1:61947595-61947614 | None:intergenic | 30.0% | |
| GTCTCTTAGTATTTCCAAAT+TGG | + | chr8_1:61947603-61947622 | Msa1205620:CDS | 30.0% | |
| TTAGTATTTCCAAATTGGTC+AGG | + | chr8_1:61947608-61947627 | Msa1205620:CDS | 30.0% | |
| TAGTATTTCCAAATTGGTCA+GGG | + | chr8_1:61947609-61947628 | Msa1205620:CDS | 30.0% | |
| AATGGAGAAATTGAAGTTTC+TGG | + | chr8_1:61947791-61947810 | Msa1205620:CDS | 30.0% | |
| ! | CAAAGGTTATAAAGCAGTTT+TGG | + | chr8_1:61947844-61947863 | Msa1205620:CDS | 30.0% |
| AAAATCCACTGATGAAACAT+TGG | + | chr8_1:61947871-61947890 | Msa1205620:CDS | 30.0% | |
| CATCAGTTGTTAATTAGCAT+AGG | + | chr8_1:61948028-61948047 | Msa1205620:intron | 30.0% | |
| ! | ACTTTTACATACTGTTGACA+TGG | - | chr8_1:61948362-61948381 | None:intergenic | 30.0% |
| TGTCAACAGTATGTAAAAGT+TGG | + | chr8_1:61948362-61948381 | Msa1205620:CDS | 30.0% | |
| GTTACCTTTATATTCTCTGT+TGG | + | chr8_1:61948523-61948542 | Msa1205620:intron | 30.0% | |
| ATCTCCAACAGAGAATATAA+AGG | - | chr8_1:61948530-61948549 | None:intergenic | 30.0% | |
| !!! | CACTATTTTGACTAGACATA+GGG | - | chr8_1:61948554-61948573 | None:intergenic | 30.0% |
| ATAGTGGTTATATCATAGGT+TGG | + | chr8_1:61948568-61948587 | Msa1205620:intron | 30.0% | |
| TTCAAAAGCTAATTTATGGG+GGG | - | chr8_1:61948602-61948621 | None:intergenic | 30.0% | |
| !! | GTGAAATTTAGACTAGTCTT+AGG | - | chr8_1:61948705-61948724 | None:intergenic | 30.0% |
| ATAACTACATGTGTCAGTAT+TGG | + | chr8_1:61948859-61948878 | Msa1205620:intron | 30.0% | |
| ACCAAACATGCATTTATTCT+GGG | + | chr8_1:61948901-61948920 | Msa1205620:intron | 30.0% | |
| !!! | TTCTGGGTTTTTTGAAGTAT+CGG | + | chr8_1:61948917-61948936 | Msa1205620:intron | 30.0% |
| GAACGAGAATTAGTCAATTA+GGG | - | chr8_1:61949050-61949069 | None:intergenic | 30.0% | |
| AGAACGAGAATTAGTCAATT+AGG | - | chr8_1:61949051-61949070 | None:intergenic | 30.0% | |
| ATCTAACAAAGCTGAAGAAT+CGG | - | chr8_1:61949393-61949412 | None:intergenic | 30.0% | |
| !! | ATTCTTCAGCTTTGTTAGAT+TGG | + | chr8_1:61949393-61949412 | Msa1205620:CDS | 30.0% |
| ATTGATGAAGTTGAAGAACT+TGG | + | chr8_1:61949593-61949612 | Msa1205620:CDS | 30.0% | |
| ! | TGTTTCAAAGAGTATAGACA+TGG | + | chr8_1:61949626-61949645 | Msa1205620:CDS | 30.0% |
| ! | TTTTTGTCACTCTCATTCCT+AGG | - | chr8_1:61946489-61946508 | None:intergenic | 35.0% |
| GTGACAAAAACCTTGAGAAA+TGG | + | chr8_1:61946499-61946518 | Msa1205620:CDS | 35.0% | |
| TACGTTTCTTCCATTTCTCA+AGG | - | chr8_1:61946512-61946531 | None:intergenic | 35.0% | |
| !! | TTTTTGGTGAGAGGCTTAAA+AGG | + | chr8_1:61946538-61946557 | Msa1205620:CDS | 35.0% |
| AAAGGTTTCCGTGTTTAGTT+TGG | + | chr8_1:61946556-61946575 | Msa1205620:CDS | 35.0% | |
| GTAGTCTTCCAAACTAAACA+CGG | - | chr8_1:61946567-61946586 | None:intergenic | 35.0% | |
| !! | GTTTAGTTTGGAAGACTACA+TGG | + | chr8_1:61946568-61946587 | Msa1205620:CDS | 35.0% |
| !! | TTGTAATCTCTTTTGATGGC+AGG | + | chr8_1:61947005-61947024 | Msa1205620:intron | 35.0% |
| !! | TGTAATCTCTTTTGATGGCA+GGG | + | chr8_1:61947006-61947025 | Msa1205620:intron | 35.0% |
| TCTCAATTGTTGTGTTTGGA+AGG | + | chr8_1:61947395-61947414 | Msa1205620:intron | 35.0% | |
| GAAGAATTACGATTATGGTG+TGG | + | chr8_1:61947457-61947476 | Msa1205620:CDS | 35.0% | |
| TCTTCACGACATTATCAACT+CGG | - | chr8_1:61947526-61947545 | None:intergenic | 35.0% | |
| !! | AGTTGATAATGTCGTGAAGA+TGG | + | chr8_1:61947526-61947545 | Msa1205620:CDS | 35.0% |
| AGTATTTCCAAATTGGTCAG+GGG | + | chr8_1:61947610-61947629 | Msa1205620:CDS | 35.0% | |
| TACCTTCTATAGATTTGGCT+AGG | - | chr8_1:61947673-61947692 | None:intergenic | 35.0% | |
| TATGTGTAGCATCAACACTT+TGG | + | chr8_1:61948073-61948092 | Msa1205620:intron | 35.0% | |
| ATCAACACTTTGGATGAAAG+AGG | + | chr8_1:61948083-61948102 | Msa1205620:intron | 35.0% | |
| ! | TGTCTGTTTTGTGATTGTGT+CGG | - | chr8_1:61948136-61948155 | None:intergenic | 35.0% |
| !! | TAAGACATTCTTTGAAGCAC+TGG | - | chr8_1:61948256-61948275 | None:intergenic | 35.0% |
| TTGTTTGAGAACAGAAATCC+AGG | + | chr8_1:61948430-61948449 | Msa1205620:CDS | 35.0% | |
| GAACTCAAATGTTATGTACC+TGG | - | chr8_1:61948451-61948470 | None:intergenic | 35.0% | |
| !!! | CCACTATTTTGACTAGACAT+AGG | - | chr8_1:61948555-61948574 | None:intergenic | 35.0% |
| CCTATGTCTAGTCAAAATAG+TGG | + | chr8_1:61948552-61948571 | Msa1205620:intron | 35.0% | |
| !! | ACTTTAAGCTAGGAGGTATT+TGG | - | chr8_1:61948731-61948750 | None:intergenic | 35.0% |
| AAATACCTCCTAGCTTAAAG+TGG | + | chr8_1:61948730-61948749 | Msa1205620:intron | 35.0% | |
| ! | ACTAACACTAACAAGAGTAC+TGG | + | chr8_1:61948775-61948794 | Msa1205620:intron | 35.0% |
| CACCAAACATGCATTTATTC+TGG | + | chr8_1:61948900-61948919 | Msa1205620:intron | 35.0% | |
| ACCCAGAATAAATGCATGTT+TGG | - | chr8_1:61948905-61948924 | None:intergenic | 35.0% | |
| ! | TTCACCCTATGAATTAGCTT+AGG | + | chr8_1:61948953-61948972 | Msa1205620:intron | 35.0% |
| ! | TCACCCTATGAATTAGCTTA+GGG | + | chr8_1:61948954-61948973 | Msa1205620:intron | 35.0% |
| AACCCCTAAGCTAATTCATA+GGG | - | chr8_1:61948960-61948979 | None:intergenic | 35.0% | |
| !!! | GCGTCTACTTTTTATACTGT+TGG | - | chr8_1:61949198-61949217 | None:intergenic | 35.0% |
| AGATTATCGGAGAGAATTTC+TGG | - | chr8_1:61949230-61949249 | None:intergenic | 35.0% | |
| CAATGCTTCACGAAGATTAT+CGG | - | chr8_1:61949243-61949262 | None:intergenic | 35.0% | |
| CTTACGTTCTTGTAGTTGTT+CGG | - | chr8_1:61949456-61949475 | None:intergenic | 35.0% | |
| AATGAAGCAAAAGCAGCAAA+AGG | - | chr8_1:61949539-61949558 | None:intergenic | 35.0% | |
| ATGAAGTTGAAGAACTTGGT+CGG | + | chr8_1:61949597-61949616 | Msa1205620:CDS | 35.0% | |
| TCTAGGCCATCATGAACTTT+AGG | - | chr8_1:61946456-61946475 | None:intergenic | 40.0% | |
| AGTTCATGATGGCCTAGAAA+TGG | + | chr8_1:61946458-61946477 | Msa1205620:CDS | 40.0% | |
| TCCTAGGTATAGCCATTTCT+AGG | - | chr8_1:61946473-61946492 | None:intergenic | 40.0% | |
| !!! | GTATGCATGTTTTTGGTGAG+AGG | + | chr8_1:61946529-61946548 | Msa1205620:CDS | 40.0% |
| AGTTTGGAAGACTACATGGA+AGG | + | chr8_1:61946572-61946591 | Msa1205620:CDS | 40.0% | |
| GTGATCCATGCATTCAAAGT+TGG | + | chr8_1:61946618-61946637 | Msa1205620:CDS | 40.0% | |
| TGTTGGAGCCACTCTTTAAA+GGG | + | chr8_1:61946673-61946692 | Msa1205620:CDS | 40.0% | |
| ! | GATTGGCGAGAATGCTATTT+GGG | + | chr8_1:61946695-61946714 | Msa1205620:CDS | 40.0% |
| !! | GTAATCTCTTTTGATGGCAG+GGG | + | chr8_1:61947007-61947026 | Msa1205620:intron | 40.0% |
| TTATGCAAAGGGCTGAATAG+AGG | + | chr8_1:61947035-61947054 | Msa1205620:CDS | 40.0% | |
| AAAGGGCTGAATAGAGGATT+GGG | + | chr8_1:61947041-61947060 | Msa1205620:CDS | 40.0% | |
| GATTGGGGACATTATTAGCA+GGG | + | chr8_1:61947057-61947076 | Msa1205620:CDS | 40.0% | |
| CTGCAATGAAAACAGCTTGA+AGG | - | chr8_1:61947130-61947149 | None:intergenic | 40.0% | |
| GGGAATGAACCTCATATATG+TGG | - | chr8_1:61947429-61947448 | None:intergenic | 40.0% | |
| CAATGGCTATGGTATAGAAG+CGG | - | chr8_1:61947559-61947578 | None:intergenic | 40.0% | |
| GAGACTCATGAAAAGGCAAA+TGG | - | chr8_1:61947588-61947607 | None:intergenic | 40.0% | |
| TCCACAGCTTTCAAACTTGA+AGG | + | chr8_1:61947647-61947666 | Msa1205620:CDS | 40.0% | |
| GCTTACCAATGTTTCATCAG+TGG | - | chr8_1:61947879-61947898 | None:intergenic | 40.0% | |
| CATACCTGGTGTAGAAAGTT+AGG | - | chr8_1:61948057-61948076 | None:intergenic | 40.0% | |
| !!! | CGTTTTGTTTTGAACTGTGC+AGG | + | chr8_1:61948286-61948305 | Msa1205620:intron | 40.0% |
| TGACAGTACCTAAAATGCCT+TGG | - | chr8_1:61948332-61948351 | None:intergenic | 40.0% | |
| ! | TATACAGTGGTAGCTCTACA+TGG | + | chr8_1:61948407-61948426 | Msa1205620:CDS | 40.0% |
| AGCATCTCACCATTTGATGA+AGG | + | chr8_1:61948495-61948514 | Msa1205620:intron | 40.0% | |
| AAAAGCTAATTTATGGGGGG+AGG | - | chr8_1:61948599-61948618 | None:intergenic | 40.0% | |
| TGTTAGTGTTAGTGCTTCCT+AGG | - | chr8_1:61948768-61948787 | None:intergenic | 40.0% | |
| !!! | GTGTCGATTTTTCAGTGTCA+GGG | - | chr8_1:61948807-61948826 | None:intergenic | 40.0% |
| ! | CACCCTATGAATTAGCTTAG+GGG | + | chr8_1:61948955-61948974 | Msa1205620:intron | 40.0% |
| CAACCCCTAAGCTAATTCAT+AGG | - | chr8_1:61948961-61948980 | None:intergenic | 40.0% | |
| !! | AGAGAATTTCTGGTGAGCAA+TGG | - | chr8_1:61949220-61949239 | None:intergenic | 40.0% |
| ! | GTGATTTTATGGCAGTGTTG+AGG | - | chr8_1:61949271-61949290 | None:intergenic | 40.0% |
| ! | GTTGTTAGCTTGGATGTCAT+TGG | - | chr8_1:61949315-61949334 | None:intergenic | 40.0% |
| ! | CTGTTCAGCTGATACACTTT+TGG | - | chr8_1:61949423-61949442 | None:intergenic | 40.0% |
| TGTATCAGCTGAACAGACAA+TGG | + | chr8_1:61949427-61949446 | Msa1205620:CDS | 40.0% | |
| ! | TGCTTTTGCTTCATTGCTTG+TGG | + | chr8_1:61949544-61949563 | Msa1205620:CDS | 40.0% |
| TTCATTGCTTGTGGAAACTG+TGG | + | chr8_1:61949553-61949572 | Msa1205620:CDS | 40.0% | |
| !! | GAAACCAAGAGTTGATGTGT+TGG | + | chr8_1:61949673-61949692 | Msa1205620:CDS | 40.0% |
| TTGTCCAACACATCAACTCT+TGG | - | chr8_1:61949680-61949699 | None:intergenic | 40.0% | |
| GCCTAGAAATGGCTATACCT+AGG | + | chr8_1:61946469-61946488 | Msa1205620:CDS | 45.0% | |
| TTGGAAGACTACATGGAAGG+TGG | + | chr8_1:61946575-61946594 | Msa1205620:CDS | 45.0% | |
| TGGAAGACTACATGGAAGGT+GGG | + | chr8_1:61946576-61946595 | Msa1205620:CDS | 45.0% | |
| ATGCATGGATCACCCTTCTT+GGG | - | chr8_1:61946611-61946630 | None:intergenic | 45.0% | |
| AATGCATGGATCACCCTTCT+TGG | - | chr8_1:61946612-61946631 | None:intergenic | 45.0% | |
| CTGTTGGAGCCACTCTTTAA+AGG | + | chr8_1:61946672-61946691 | Msa1205620:CDS | 45.0% | |
| ! | GAGCCACTCTTTAAAGGGAT+TGG | + | chr8_1:61946678-61946697 | Msa1205620:CDS | 45.0% |
| ! | TCGCCAATCCCTTTAAAGAG+TGG | - | chr8_1:61946684-61946703 | None:intergenic | 45.0% |
| ! | GGATTGGCGAGAATGCTATT+TGG | + | chr8_1:61946694-61946713 | Msa1205620:CDS | 45.0% |
| AATTGCAGCCGCAACATCAA+AGG | - | chr8_1:61946893-61946912 | None:intergenic | 45.0% | |
| ! | TGATGTTGCGGCTGCAATTT+TGG | + | chr8_1:61946894-61946913 | Msa1205620:intron | 45.0% |
| CAGGGGCAACTTTATGCAAA+GGG | + | chr8_1:61947024-61947043 | Msa1205620:intron | 45.0% | |
| CAAAGGGCTGAATAGAGGAT+TGG | + | chr8_1:61947040-61947059 | Msa1205620:CDS | 45.0% | |
| AAGGGCTGAATAGAGGATTG+GGG | + | chr8_1:61947042-61947061 | Msa1205620:CDS | 45.0% | |
| GGATTGGGGACATTATTAGC+AGG | + | chr8_1:61947056-61947075 | Msa1205620:CDS | 45.0% | |
| GATCTGCAGCCACATATATG+AGG | + | chr8_1:61947417-61947436 | Msa1205620:CDS | 45.0% | |
| CGCTTCTATACCATAGCCAT+TGG | + | chr8_1:61947557-61947576 | Msa1205620:CDS | 45.0% | |
| AGATCTTCCCCTGACCAATT+TGG | - | chr8_1:61947620-61947639 | None:intergenic | 45.0% | |
| ! | GCCTTCAAGTTTGAAAGCTG+TGG | - | chr8_1:61947651-61947670 | None:intergenic | 45.0% |
| GGCCTAGCCAAATCTATAGA+AGG | + | chr8_1:61947668-61947687 | Msa1205620:CDS | 45.0% | |
| ! | GTGTTGATGCTACACATACC+TGG | - | chr8_1:61948071-61948090 | None:intergenic | 45.0% |
| !! | CTTTGGATGAAAGAGGTGTC+TGG | + | chr8_1:61948090-61948109 | Msa1205620:intron | 45.0% |
| TGTCGGACACAGACACATAT+CGG | - | chr8_1:61948119-61948138 | None:intergenic | 45.0% | |
| !! | TTTGAAGCACTGGTGCTTTG+AGG | - | chr8_1:61948246-61948265 | None:intergenic | 45.0% |
| TGAACTGTGCAGGCATTACA+TGG | + | chr8_1:61948296-61948315 | Msa1205620:intron | 45.0% | |
| TGCAGGCATTACATGGAAGT+TGG | + | chr8_1:61948303-61948322 | Msa1205620:intron | 45.0% | |
| GCAGGCATTACATGGAAGTT+GGG | + | chr8_1:61948304-61948323 | Msa1205620:intron | 45.0% | |
| GGAACTGTTCTTCGCCAATT+CGG | + | chr8_1:61948383-61948402 | Msa1205620:CDS | 45.0% | |
| GAACTGTTCTTCGCCAATTC+GGG | + | chr8_1:61948384-61948403 | Msa1205620:CDS | 45.0% | |
| CTACCACTGTATACCCGAAT+TGG | - | chr8_1:61948400-61948419 | None:intergenic | 45.0% | |
| TACCTCCTAGCTTAAAGTGG+AGG | + | chr8_1:61948733-61948752 | Msa1205620:intron | 45.0% | |
| TGTTAGTGCTTCCTAGGTGA+AGG | - | chr8_1:61948762-61948781 | None:intergenic | 45.0% | |
| !!! | GGTGTCGATTTTTCAGTGTC+AGG | - | chr8_1:61948808-61948827 | None:intergenic | 45.0% |
| AACAGGACTCGAACAGATCT+CGG | - | chr8_1:61949119-61949138 | None:intergenic | 45.0% | |
| ATCTGTTCGAGTCCTGTTCA+AGG | + | chr8_1:61949121-61949140 | Msa1205620:CDS | 45.0% | |
| TTATGCAAGGGTCCTTGAAC+AGG | - | chr8_1:61949136-61949155 | None:intergenic | 45.0% | |
| !! | CTGCTGCTAGTCTTATGCAA+GGG | - | chr8_1:61949148-61949167 | None:intergenic | 45.0% |
| !! | TCTGCTGCTAGTCTTATGCA+AGG | - | chr8_1:61949149-61949168 | None:intergenic | 45.0% |
| TTGCATAAGACTAGCAGCAG+AGG | + | chr8_1:61949148-61949167 | Msa1205620:CDS | 45.0% | |
| ! | GAGTCGTGGCTGTGATTTTA+TGG | - | chr8_1:61949282-61949301 | None:intergenic | 45.0% |
| CTTTCCATGAGAGGAAGCTA+TGG | - | chr8_1:61949348-61949367 | None:intergenic | 45.0% | |
| GCAAAAGCAGCAAAAGGCAA+TGG | - | chr8_1:61949533-61949552 | None:intergenic | 45.0% | |
| AGTTGAAGAACTTGGTCGGT+TGG | + | chr8_1:61949601-61949620 | Msa1205620:CDS | 45.0% | |
| GACAACCATTTCCCTTCTCA+TGG | + | chr8_1:61949695-61949714 | Msa1205620:CDS | 45.0% | |
| AACCATTTCCCTTCTCATGG+AGG | + | chr8_1:61949698-61949717 | Msa1205620:CDS | 45.0% | |
| !! | TAATTAAAAAATATTTAAAG+TGG | - | chr8_1:61948176-61948195 | None:intergenic | 5.0% |
| !! | ATAAAATTTATCAAATTAAA+AGG | - | chr8_1:61949087-61949106 | None:intergenic | 5.0% |
| TGGGACATGATGACCCAAGA+AGG | + | chr8_1:61946595-61946614 | Msa1205620:CDS | 50.0% | |
| GGGACATGATGACCCAAGAA+GGG | + | chr8_1:61946596-61946615 | Msa1205620:CDS | 50.0% | |
| GAATTCGAACACCACGACGA+CGG | - | chr8_1:61946730-61946749 | None:intergenic | 50.0% | |
| ! | GTTGCGGCTGCAATTTTGGA+CGG | + | chr8_1:61946898-61946917 | Msa1205620:intron | 50.0% |
| GCAGGGGCAACTTTATGCAA+AGG | + | chr8_1:61947023-61947042 | Msa1205620:intron | 50.0% | |
| ACACTCAACGCAACTGTACG+TGG | + | chr8_1:61947236-61947255 | Msa1205620:intron | 50.0% | |
| AATGGCACAGCCAATGGCTA+TGG | - | chr8_1:61947570-61947589 | None:intergenic | 50.0% | |
| AAGGCAAATGGCACAGCCAA+TGG | - | chr8_1:61947576-61947595 | None:intergenic | 50.0% | |
| GCTTGACTTAGGGCACATGT+TGG | - | chr8_1:61947946-61947965 | None:intergenic | 50.0% | |
| GGCACCTAACTTTCTACACC+AGG | + | chr8_1:61948050-61948069 | Msa1205620:intron | 50.0% | |
| TACATGGAAGTTGGGAGCCA+AGG | + | chr8_1:61948312-61948331 | Msa1205620:CDS | 50.0% | |
| !! | GTTGGGAGCCAAGGCATTTT+AGG | + | chr8_1:61948321-61948340 | Msa1205620:CDS | 50.0% |
| TCGCCAATTCGGGTATACAG+TGG | + | chr8_1:61948394-61948413 | Msa1205620:CDS | 50.0% | |
| TAGTGCTTCCTAGGTGAAGG+TGG | - | chr8_1:61948759-61948778 | None:intergenic | 50.0% | |
| !! | GTTTGGTGTCTGAGACGTGT+TGG | - | chr8_1:61948888-61948907 | None:intergenic | 50.0% |
| TCACAGCCACGACTCTTCTT+AGG | + | chr8_1:61949287-61949306 | Msa1205620:CDS | 50.0% | |
| TTGGAGCCTAAGAAGAGTCG+TGG | - | chr8_1:61949296-61949315 | None:intergenic | 50.0% | |
| TGGCGAGCATGTTGTTAGCT+TGG | - | chr8_1:61949325-61949344 | None:intergenic | 50.0% | |
| TCCATGAGAGGAAGCTATGG+TGG | - | chr8_1:61949345-61949364 | None:intergenic | 50.0% | |
| GAGTGAGCTCTTTCCATGAG+AGG | - | chr8_1:61949357-61949376 | None:intergenic | 50.0% | |
| TGTGGAAACTGTGGCGAAAC+TGG | + | chr8_1:61949562-61949581 | Msa1205620:CDS | 50.0% | |
| CTCCTCCATGAGAAGGGAAA+TGG | - | chr8_1:61949703-61949722 | None:intergenic | 50.0% | |
| GTGGTGTTCGAATTCACCGC+AGG | + | chr8_1:61946735-61946754 | Msa1205620:CDS | 55.0% | |
| GGCCTCCACTTTAAGCTAGG+AGG | - | chr8_1:61948738-61948757 | None:intergenic | 55.0% | |
| GGTGGCCTCCACTTTAAGCT+AGG | - | chr8_1:61948741-61948760 | None:intergenic | 55.0% | |
| GCCACCATAGCTTCCTCTCA+TGG | + | chr8_1:61949341-61949360 | Msa1205620:CDS | 55.0% | |
| !! | GCACTGGTGCTTTGAGGCAC+TGG | - | chr8_1:61948240-61948259 | None:intergenic | 60.0% |
| AGTGGAGGCCACCTTCACCT+AGG | + | chr8_1:61948748-61948767 | Msa1205620:intron | 60.0% | |
| GGCTGTCATGACCGTCGTCG+TGG | + | chr8_1:61946716-61946735 | Msa1205620:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 61946447 | 61949727 | 61946447 | ID=Msa1205620;Name=Msa1205620 |
| chr8_1 | mRNA | 61946447 | 61949727 | 61946447 | ID=Msa1205620-mRNA-1;Parent=Msa1205620;Name=Msa1205620-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0|0|1|1|1|6|0|534 |
| chr8_1 | exon | 61946447 | 61946756 | 61946447 | ID=Msa1205620-mRNA-1:exon:20071;Parent=Msa1205620-mRNA-1 |
| chr8_1 | exon | 61947027 | 61947167 | 61947027 | ID=Msa1205620-mRNA-1:exon:20072;Parent=Msa1205620-mRNA-1 |
| chr8_1 | exon | 61947417 | 61947689 | 61947417 | ID=Msa1205620-mRNA-1:exon:20073;Parent=Msa1205620-mRNA-1 |
| chr8_1 | exon | 61947771 | 61947892 | 61947771 | ID=Msa1205620-mRNA-1:exon:20074;Parent=Msa1205620-mRNA-1 |
| chr8_1 | exon | 61948308 | 61948451 | 61948308 | ID=Msa1205620-mRNA-1:exon:20075;Parent=Msa1205620-mRNA-1 |
| chr8_1 | exon | 61949113 | 61949727 | 61949113 | ID=Msa1205620-mRNA-1:exon:20076;Parent=Msa1205620-mRNA-1 |
| chr8_1 | CDS | 61946447 | 61946756 | 61946447 | ID=Msa1205620-mRNA-1:cds;Parent=Msa1205620-mRNA-1 |
| chr8_1 | CDS | 61947027 | 61947167 | 61947027 | ID=Msa1205620-mRNA-1:cds;Parent=Msa1205620-mRNA-1 |
| chr8_1 | CDS | 61947417 | 61947689 | 61947417 | ID=Msa1205620-mRNA-1:cds;Parent=Msa1205620-mRNA-1 |
| chr8_1 | CDS | 61947771 | 61947892 | 61947771 | ID=Msa1205620-mRNA-1:cds;Parent=Msa1205620-mRNA-1 |
| chr8_1 | CDS | 61948308 | 61948451 | 61948308 | ID=Msa1205620-mRNA-1:cds;Parent=Msa1205620-mRNA-1 |
| chr8_1 | CDS | 61949113 | 61949727 | 61949113 | ID=Msa1205620-mRNA-1:cds;Parent=Msa1205620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
