Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299260 | XP_013457855.1 | 98.214 | 616 | 10 | 1 | 1 | 616 | 1 | 615 | 0.0 | 1266 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299260 | sp|Q8RX55|B3GTI_ARATH | 61.573 | 661 | 192 | 10 | 13 | 616 | 17 | 672 | 0.0 | 825 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299260 | A0A072URC6 | 98.214 | 616 | 10 | 1 | 1 | 616 | 1 | 615 | 0.0 | 1266 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1259540 | Msa1299260 | 0.830773 | 2.431285e-55 | -8.615850e-47 |
| Msa1194190 | Msa1299260 | 0.854761 | 9.926238e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299260 | MtrunA17_Chr4g0059801 | 98.214 | 616 | 10 | 1 | 1 | 616 | 1 | 615 | 0.0 | 1266 |
| Msa1299260 | MtrunA17_Chr5g0415331 | 67.598 | 537 | 155 | 3 | 99 | 616 | 107 | 643 | 0.0 | 775 |
| Msa1299260 | MtrunA17_Chr8g0363761 | 61.672 | 574 | 199 | 2 | 60 | 616 | 83 | 652 | 0.0 | 758 |
| Msa1299260 | MtrunA17_Chr2g0285521 | 57.356 | 537 | 209 | 4 | 99 | 616 | 154 | 689 | 0.0 | 666 |
| Msa1299260 | MtrunA17_Chr4g0068981 | 37.660 | 547 | 292 | 16 | 91 | 613 | 120 | 641 | 3.37e-109 | 342 |
| Msa1299260 | MtrunA17_Chr5g0417441 | 35.915 | 568 | 338 | 15 | 59 | 616 | 86 | 637 | 6.75e-108 | 338 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299260 | AT1G74800.1 | 61.573 | 661 | 192 | 10 | 13 | 616 | 17 | 672 | 0.0 | 825 |
| Msa1299260 | AT5G62620.1 | 60.902 | 665 | 199 | 8 | 13 | 616 | 17 | 681 | 0.0 | 825 |
| Msa1299260 | AT1G27120.1 | 61.214 | 593 | 193 | 9 | 55 | 616 | 87 | 673 | 0.0 | 738 |
| Msa1299260 | AT1G27120.2 | 61.214 | 593 | 193 | 9 | 55 | 616 | 56 | 642 | 0.0 | 738 |
| Msa1299260 | AT5G62620.2 | 58.893 | 596 | 185 | 7 | 13 | 548 | 17 | 612 | 0.0 | 710 |
| Msa1299260 | AT4G21060.1 | 56.111 | 540 | 214 | 5 | 99 | 616 | 203 | 741 | 0.0 | 649 |
| Msa1299260 | AT4G21060.2 | 56.111 | 540 | 214 | 5 | 99 | 616 | 146 | 684 | 0.0 | 648 |
| Msa1299260 | AT1G26810.2 | 37.547 | 530 | 313 | 11 | 95 | 613 | 118 | 640 | 3.57e-108 | 340 |
| Msa1299260 | AT1G26810.1 | 37.547 | 530 | 313 | 11 | 95 | 613 | 118 | 640 | 3.57e-108 | 340 |
| Msa1299260 | AT3G06440.1 | 35.529 | 501 | 277 | 12 | 128 | 613 | 149 | 618 | 7.00e-95 | 304 |
| Msa1299260 | AT3G06440.2 | 35.593 | 472 | 244 | 11 | 156 | 613 | 164 | 589 | 2.15e-89 | 289 |
| Msa1299260 | AT1G53290.1 | 24.887 | 221 | 150 | 6 | 371 | 582 | 89 | 302 | 9.65e-13 | 70.5 |
| Msa1299260 | AT2G26100.1 | 23.913 | 230 | 141 | 6 | 371 | 582 | 113 | 326 | 2.65e-11 | 66.2 |
| Msa1299260 | AT2G26100.2 | 23.913 | 230 | 141 | 6 | 371 | 582 | 113 | 326 | 3.64e-11 | 65.5 |
Find 190 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAGCTTGTTCTCATTAAA+TGG | 0.078939 | 8_3:-60352639 | None:intergenic |
| CATTAACACCTTGTTATATT+TGG | 0.147019 | 8_3:+60354533 | Msa1299260:three_prime_UTR |
| CCGGGTCGTTTCTCGGGTTT+CGG | 0.164975 | 8_3:-60350842 | None:intergenic |
| AACCTTTGCGCTATGGTAAA+TGG | 0.171593 | 8_3:+60353561 | Msa1299260:CDS |
| CCTCGATCGGTTTCGGTTAC+CGG | 0.222788 | 8_3:+60350872 | Msa1299260:CDS |
| ACAGTGGCTATATGTGAATA+TGG | 0.238270 | 8_3:+60353307 | Msa1299260:CDS |
| GATTCAATGGGTGCTTATAT+TGG | 0.242485 | 8_3:+60353518 | Msa1299260:CDS |
| CGGGTCGTTTCTCGGGTTTC+GGG | 0.249438 | 8_3:-60350841 | None:intergenic |
| TTATTTGCAGTTGTTTAAAA+TGG | 0.255152 | 8_3:+60354160 | Msa1299260:intron |
| GTTTCGGGGCGGTTTGAATT+GGG | 0.255458 | 8_3:-60350826 | None:intergenic |
| GGTTTCGGGGCGGTTTGAAT+TGG | 0.257132 | 8_3:-60350827 | None:intergenic |
| GACCGATAATTGATACTCTT+TGG | 0.260484 | 8_3:-60350753 | None:intergenic |
| TAAAATTACGGTCGCAAATA+AGG | 0.289928 | 8_3:-60350366 | None:intergenic |
| TTCTAGTTGGTCATTTGTTT+CGG | 0.296914 | 8_3:+60354573 | Msa1299260:three_prime_UTR |
| ATCATGTGCCTCACATTAAA+AGG | 0.302297 | 8_3:-60354667 | None:intergenic |
| CAAACATACTGCTAAGATTA+AGG | 0.308313 | 8_3:+60354633 | Msa1299260:three_prime_UTR |
| AATTTGAGAAGCATAAATTA+AGG | 0.315817 | 8_3:+60354029 | Msa1299260:CDS |
| TAAAATGGAAGATGTGAGTA+TGG | 0.343186 | 8_3:+60354175 | Msa1299260:CDS |
| ATTCCATGTGGGTTGACGTT+AGG | 0.343305 | 8_3:+60350929 | Msa1299260:CDS |
| AGCTTAAGATTCTGCCAGTT+TGG | 0.344065 | 8_3:+60354248 | Msa1299260:CDS |
| CTCCAATCCCCTTTCAACCT+TGG | 0.344309 | 8_3:-60351073 | None:intergenic |
| ATTCAATGGGTGCTTATATT+GGG | 0.352784 | 8_3:+60353519 | Msa1299260:CDS |
| CTCATCTTTCCCTTTCTAGT+TGG | 0.358518 | 8_3:+60354560 | Msa1299260:three_prime_UTR |
| TGCCAGTTTGGCTGTATAGA+AGG | 0.360397 | 8_3:+60354260 | Msa1299260:CDS |
| CAGAAGAGTTTGTATCAAAA+TGG | 0.360818 | 8_3:+60352562 | Msa1299260:CDS |
| CAAGGCAGATGATGTGCCTT+TGG | 0.360820 | 8_3:+60354309 | Msa1299260:CDS |
| TTGAGCTTAATTCTTGCTAT+AGG | 0.365590 | 8_3:+60351110 | Msa1299260:CDS |
| CATGACCCGGGTCGTTTCTC+GGG | 0.367277 | 8_3:-60350848 | None:intergenic |
| TAGTGGTGGGGCACGCCATC+TGG | 0.368521 | 8_3:-60352953 | None:intergenic |
| GTCATGTCCTCGATCGGTTT+CGG | 0.371149 | 8_3:+60350865 | Msa1299260:CDS |
| TCAAAGATGGAAAACGCGTT+TGG | 0.379937 | 8_3:+60350774 | Msa1299260:CDS |
| ACATGACCCGGGTCGTTTCT+CGG | 0.384566 | 8_3:-60350849 | None:intergenic |
| ATATAAGCACCCATTGAATC+TGG | 0.387504 | 8_3:-60353515 | None:intergenic |
| TTTCGGGGCGGTTTGAATTG+GGG | 0.387734 | 8_3:-60350825 | None:intergenic |
| TCGTATATTTGTAAATATAT+CGG | 0.389094 | 8_3:+60354456 | Msa1299260:three_prime_UTR |
| TTCCAAAGAGTATCAATTAT+CGG | 0.394580 | 8_3:+60350751 | Msa1299260:CDS |
| ACCTTTGCGCTATGGTAAAT+GGG | 0.399165 | 8_3:+60353562 | Msa1299260:CDS |
| GGCTCGTTTCTTTGTAGCAC+TGG | 0.401231 | 8_3:+60353095 | Msa1299260:CDS |
| TTCCATGTGGGTTGACGTTA+GGG | 0.406982 | 8_3:+60350930 | Msa1299260:CDS |
| TTTGTTCTTACTGTTAGTGC+TGG | 0.408116 | 8_3:+60352660 | Msa1299260:CDS |
| TACTGTTAGTGCTGGATTGG+AGG | 0.410336 | 8_3:+60352668 | Msa1299260:CDS |
| CAGTGGCTATATGTGAATAT+GGG | 0.410795 | 8_3:+60353308 | Msa1299260:CDS |
| AACCTTCTATACAGCCAAAC+TGG | 0.415858 | 8_3:-60354262 | None:intergenic |
| ATAGCTTGTTCTCATTAAAT+GGG | 0.417104 | 8_3:-60352638 | None:intergenic |
| TGAAGTGTGAGAAGTGGATT+GGG | 0.417442 | 8_3:+60352523 | Msa1299260:CDS |
| TATGGTGGATAATCCTCTTC+AGG | 0.422986 | 8_3:-60353950 | None:intergenic |
| GGGTCGGAGTTTGCGGCGAA+TGG | 0.424804 | 8_3:+60350893 | Msa1299260:CDS |
| CAGCCATCCGCTCAGCGAAA+TGG | 0.425039 | 8_3:-60353023 | None:intergenic |
| TCTTACTGTTAGTGCTGGAT+TGG | 0.429595 | 8_3:+60352665 | Msa1299260:CDS |
| CAAGAATTAAGCTCAATAAC+AGG | 0.430167 | 8_3:-60351103 | None:intergenic |
| TCAGCTTTGTGATGAGTACT+AGG | 0.439433 | 8_3:-60350686 | None:intergenic |
| AAGGCAGATGATGTGCCTTT+GGG | 0.441955 | 8_3:+60354310 | Msa1299260:CDS |
| TCTCGGGCTGATCAAGATAC+TGG | 0.442369 | 8_3:+60351172 | Msa1299260:CDS |
| ATTTGAGAAGCATAAATTAA+GGG | 0.444140 | 8_3:+60354030 | Msa1299260:CDS |
| TACCATAGCGCAAAGGTTTG+TGG | 0.445602 | 8_3:-60353556 | None:intergenic |
| GATTATCCACCATATGCTAA+TGG | 0.446168 | 8_3:+60353959 | Msa1299260:CDS |
| TGCTGCTGTGGAGAAATATT+AGG | 0.446378 | 8_3:-60352916 | None:intergenic |
| ACATCATCTGCCTTGGAGAT+TGG | 0.446915 | 8_3:-60354301 | None:intergenic |
| GGTTACCGGGTCGGAGTTTG+CGG | 0.448831 | 8_3:+60350886 | Msa1299260:CDS |
| CATTTCAATCCAAGGTTGAA+AGG | 0.451774 | 8_3:+60351064 | Msa1299260:CDS |
| AAAGCTGATTCGATTCTCTC+TGG | 0.453769 | 8_3:+60350701 | Msa1299260:CDS |
| AAGGAAGGTTCCAGATTCAA+TGG | 0.456683 | 8_3:+60353505 | Msa1299260:CDS |
| GGTTGGGAAACCGTTGAGTT+CGG | 0.457799 | 8_3:+60350967 | Msa1299260:CDS |
| CTCGATCGGTTTCGGTTACC+GGG | 0.458045 | 8_3:+60350873 | Msa1299260:CDS |
| GACGTTAGGGTCGCATATAA+CGG | 0.460702 | 8_3:+60350943 | Msa1299260:CDS |
| ATCCAAGGTTGAAAGGGGAT+TGG | 0.464715 | 8_3:+60351071 | Msa1299260:CDS |
| CGAAATGGTTTCCAGCTGAT+AGG | 0.465640 | 8_3:-60353008 | None:intergenic |
| GTGAAGTGTGAGAAGTGGAT+TGG | 0.470984 | 8_3:+60352522 | Msa1299260:CDS |
| TATTGTTATAGTGCCTTACA+TGG | 0.471405 | 8_3:+60353258 | Msa1299260:CDS |
| AACAATTCGACACCAAAGTT+AGG | 0.473926 | 8_3:-60352976 | None:intergenic |
| AAACAAATGACCAACTAGAA+AGG | 0.481706 | 8_3:-60354570 | None:intergenic |
| CCACCATATGCTAATGGACC+GGG | 0.482311 | 8_3:+60353965 | Msa1299260:CDS |
| ATTTCAATCCAAGGTTGAAA+GGG | 0.482323 | 8_3:+60351065 | Msa1299260:CDS |
| GCATTCTAGTAGTAAAATTA+CGG | 0.483534 | 8_3:-60350378 | None:intergenic |
| TATCAATTATCGGTCAAAGA+TGG | 0.490425 | 8_3:+60350761 | Msa1299260:CDS |
| TTTACTCTTGAGGATGCTAC+TGG | 0.491271 | 8_3:+60352829 | Msa1299260:CDS |
| AACAAATGACCAACTAGAAA+GGG | 0.492567 | 8_3:-60354569 | None:intergenic |
| CACCACAAACCTTTGCGCTA+TGG | 0.494561 | 8_3:+60353554 | Msa1299260:CDS |
| ACTGTTAGTGCTGGATTGGA+GGG | 0.495887 | 8_3:+60352669 | Msa1299260:CDS |
| CAAAGGCACATCATCTGCCT+TGG | 0.496875 | 8_3:-60354308 | None:intergenic |
| TCATTTGTTTCGGCTAGGAT+TGG | 0.499792 | 8_3:+60354583 | Msa1299260:three_prime_UTR |
| AATTAATGCAGAGTTGAAGA+AGG | 0.502321 | 8_3:+60353216 | Msa1299260:CDS |
| TGTGTTTGAGTCGGCGGTGT+TGG | 0.504980 | 8_3:-60350403 | None:intergenic |
| GGTCGGAGTTTGCGGCGAAT+GGG | 0.506308 | 8_3:+60350894 | Msa1299260:CDS |
| TTCATCGGCATCCTATCAGC+TGG | 0.509286 | 8_3:+60352997 | Msa1299260:CDS |
| ATCGGTTTCGGTTACCGGGT+CGG | 0.509889 | 8_3:+60350877 | Msa1299260:CDS |
| CTTCTTTGAGATGTGATGGT+TGG | 0.510984 | 8_3:+60351146 | Msa1299260:CDS |
| GGAGTTGCAGGGTTTGAAAA+CGG | 0.511284 | 8_3:+60351012 | Msa1299260:CDS |
| AGGTCGTACTTATCCATGTA+AGG | 0.513016 | 8_3:-60353271 | None:intergenic |
| GATGATTATGAGAATTTGAA+AGG | 0.514415 | 8_3:-60350552 | None:intergenic |
| TGCGGCGAATGGGAGTTTGA+TGG | 0.514844 | 8_3:+60350904 | Msa1299260:CDS |
| ATGCTGTTATAGACGAAGTA+AGG | 0.515605 | 8_3:+60353486 | Msa1299260:CDS |
| GCTACTGGACTCACTGTACA+TGG | 0.516052 | 8_3:+60352844 | Msa1299260:CDS |
| TTGTTCTCATTAAATGGGAA+TGG | 0.517600 | 8_3:-60352633 | None:intergenic |
| TACCCCGGTCCATTAGCATA+TGG | 0.518101 | 8_3:-60353968 | None:intergenic |
| GATGTGATGGTTGGAAATCT+CGG | 0.522915 | 8_3:+60351155 | Msa1299260:CDS |
| GGTACTTCTTTGAGATGTGA+TGG | 0.523543 | 8_3:+60351142 | Msa1299260:CDS |
| TCATTACTCACAGTGCGATA+AGG | 0.524860 | 8_3:-60352732 | None:intergenic |
| GGTCGCATATAACGGTGGTT+GGG | 0.525176 | 8_3:+60350951 | Msa1299260:CDS |
| GAAATATTAGGATGTGTTGA+AGG | 0.525213 | 8_3:-60352904 | None:intergenic |
| GGGTCGCATATAACGGTGGT+TGG | 0.529564 | 8_3:+60350950 | Msa1299260:CDS |
| GGAGCAGGGCTTTACTCTTG+AGG | 0.531178 | 8_3:+60352819 | Msa1299260:intron |
| GGATCGTTGTTTACAAAGAG+AGG | 0.532450 | 8_3:-60350531 | None:intergenic |
| AGGAGGCAGCAAATATAGAA+TGG | 0.533959 | 8_3:-60352879 | None:intergenic |
| CTAGGATTGGTAAGATGAAA+GGG | 0.535269 | 8_3:+60354596 | Msa1299260:three_prime_UTR |
| GTTGGTCATTTGTTTCGGCT+AGG | 0.539836 | 8_3:+60354578 | Msa1299260:three_prime_UTR |
| CAGGGTTTGAAAACGGTGGA+AGG | 0.540423 | 8_3:+60351019 | Msa1299260:CDS |
| GCCCCACCACTACCTAACTT+TGG | 0.541625 | 8_3:+60352964 | Msa1299260:CDS |
| GCTAGGATTGGTAAGATGAA+AGG | 0.542570 | 8_3:+60354595 | Msa1299260:three_prime_UTR |
| GGATTGAAATGCAAAATCCT+TGG | 0.542726 | 8_3:-60351052 | None:intergenic |
| GGGAAACCGTTGAGTTCGGA+AGG | 0.544210 | 8_3:+60350971 | Msa1299260:CDS |
| TATCTCATGTTGCAGCATTG+AGG | 0.545162 | 8_3:-60354356 | None:intergenic |
| ATTAGGATGTGTTGAAGGCA+AGG | 0.547117 | 8_3:-60352899 | None:intergenic |
| TCCACCATATGCTAATGGAC+CGG | 0.548296 | 8_3:+60353964 | Msa1299260:CDS |
| AGGAAGGTTTGTGTTTGAGT+CGG | 0.548555 | 8_3:-60350412 | None:intergenic |
| AAACCATTTCGCTGAGCGGA+TGG | 0.548725 | 8_3:+60353020 | Msa1299260:CDS |
| GGTTGAAAGGGGATTGGAGT+GGG | 0.549692 | 8_3:+60351077 | Msa1299260:CDS |
| TTTGGTGTCGAATTGTTCAT+CGG | 0.555807 | 8_3:+60352982 | Msa1299260:CDS |
| AGGAAGGTTCCAGATTCAAT+GGG | 0.558346 | 8_3:+60353506 | Msa1299260:CDS |
| TCCGCTGCAATTTATCCCAA+AGG | 0.559578 | 8_3:-60354325 | None:intergenic |
| ATGTGATGGTTGGAAATCTC+GGG | 0.560828 | 8_3:+60351156 | Msa1299260:CDS |
| TTCTTGCTATAGGATGCAGT+GGG | 0.562531 | 8_3:+60351120 | Msa1299260:CDS |
| CACCAAAGTTAGGTAGTGGT+GGG | 0.562634 | 8_3:-60352966 | None:intergenic |
| GGCAGGTGAAGTGTGAGAAG+TGG | 0.571744 | 8_3:+60352517 | Msa1299260:CDS |
| AACCGATCGAGGACATGACC+CGG | 0.573142 | 8_3:-60350861 | None:intergenic |
| GTTTGAAACAGTTGATGGGC+AGG | 0.575587 | 8_3:+60352500 | Msa1299260:intron |
| ACCCGGGTCATGTCCTCGAT+CGG | 0.577534 | 8_3:+60350859 | Msa1299260:CDS |
| AAAATGGAAGATGTGAGTAT+GGG | 0.579322 | 8_3:+60354176 | Msa1299260:CDS |
| AAGATGTGAGTATGGGAATG+TGG | 0.582220 | 8_3:+60354183 | Msa1299260:CDS |
| GAAGTGTGAGAAGTGGATTG+GGG | 0.583197 | 8_3:+60352524 | Msa1299260:CDS |
| AGATGTGAGTATGGGAATGT+GGG | 0.583910 | 8_3:+60354184 | Msa1299260:CDS |
| TCGACACCAAAGTTAGGTAG+TGG | 0.587215 | 8_3:-60352970 | None:intergenic |
| TGATGACACATTTGTTAGAG+TGG | 0.588128 | 8_3:+60353463 | Msa1299260:CDS |
| CCACCGTACCTCGTTCTGAA+AGG | 0.588871 | 8_3:+60350630 | Msa1299260:CDS |
| ACACCAAAGTTAGGTAGTGG+TGG | 0.589737 | 8_3:-60352967 | None:intergenic |
| AAGGTTTGTGTTTGAGTCGG+CGG | 0.589765 | 8_3:-60350409 | None:intergenic |
| TGGTGGTTGAATAGATTCGT+AGG | 0.590566 | 8_3:+60352582 | Msa1299260:CDS |
| ATTCTTGCTATAGGATGCAG+TGG | 0.592709 | 8_3:+60351119 | Msa1299260:CDS |
| GTTTGATGGTGATTCCATGT+GGG | 0.594871 | 8_3:+60350918 | Msa1299260:CDS |
| AAGAGTTTGTATCAAAATGG+TGG | 0.599423 | 8_3:+60352565 | Msa1299260:CDS |
| TTTCAATCCAAGGTTGAAAG+GGG | 0.600721 | 8_3:+60351066 | Msa1299260:CDS |
| CCCGGTCCATTAGCATATGG+TGG | 0.600858 | 8_3:-60353965 | None:intergenic |
| TATCAAATCTTCAGAAGTGG+TGG | 0.605393 | 8_3:+60353074 | Msa1299260:CDS |
| GCCCATTTACCATAGCGCAA+AGG | 0.605559 | 8_3:-60353563 | None:intergenic |
| TGAAATGCAAAATCCTTGGT+GGG | 0.609975 | 8_3:-60351048 | None:intergenic |
| AGTGGCTATATGTGAATATG+GGG | 0.610270 | 8_3:+60353309 | Msa1299260:CDS |
| TTGAAATGCAAAATCCTTGG+TGG | 0.614352 | 8_3:-60351049 | None:intergenic |
| ATTGGTAAGATGAAAGGGAG+TGG | 0.616395 | 8_3:+60354601 | Msa1299260:three_prime_UTR |
| TCGTTTCTCGGGTTTCGGGG+CGG | 0.618879 | 8_3:-60350837 | None:intergenic |
| GACCCTAACGTCAACCCACA+TGG | 0.619717 | 8_3:-60350932 | None:intergenic |
| TCTGCGGCGTACATCATGAA+AGG | 0.623296 | 8_3:+60353437 | Msa1299260:CDS |
| TTGTGTTTGAAACAGTTGAT+GGG | 0.623496 | 8_3:+60352496 | Msa1299260:intron |
| TGTTATAGACGAAGTAAGGA+AGG | 0.624304 | 8_3:+60353490 | Msa1299260:CDS |
| TGCAACATGAGATAACAAAG+TGG | 0.624611 | 8_3:+60354365 | Msa1299260:exon |
| TCTTATCAAATCTTCAGAAG+TGG | 0.625517 | 8_3:+60353071 | Msa1299260:CDS |
| GGTTGAATAGATTCGTAGGT+CGG | 0.628907 | 8_3:+60352586 | Msa1299260:CDS |
| CCTTTCAGAACGAGGTACGG+TGG | 0.636507 | 8_3:-60350630 | None:intergenic |
| AGTTTGATGGTGATTCCATG+TGG | 0.637507 | 8_3:+60350917 | Msa1299260:CDS |
| ATACTCTTTGGAATCGAATG+CGG | 0.638680 | 8_3:-60350741 | None:intergenic |
| GCAACATGAGATAACAAAGT+GGG | 0.642839 | 8_3:+60354366 | Msa1299260:exon |
| GTGCCTTTCAGAACGAGGTA+CGG | 0.643332 | 8_3:-60350633 | None:intergenic |
| CAGCTCATTACCAATCTCCA+AGG | 0.644488 | 8_3:+60354291 | Msa1299260:CDS |
| CTGGAAACCATTTCGCTGAG+CGG | 0.649419 | 8_3:+60353016 | Msa1299260:CDS |
| GTAGGTTAATAGAGTATCTG+CGG | 0.650192 | 8_3:+60353421 | Msa1299260:intron |
| AGAACGTGCCTTTCAGAACG+AGG | 0.650228 | 8_3:-60350638 | None:intergenic |
| GGTAAGATGAAAGGGAGTGG+TGG | 0.650892 | 8_3:+60354604 | Msa1299260:three_prime_UTR |
| GAAAATTCAAGATGCTGCTG+TGG | 0.653389 | 8_3:-60352928 | None:intergenic |
| GCCTTTGGGATAAATTGCAG+CGG | 0.654028 | 8_3:+60354324 | Msa1299260:CDS |
| ATTCGCCGCAAACTCCGACC+CGG | 0.655320 | 8_3:-60350891 | None:intergenic |
| ACCAAAGTTAGGTAGTGGTG+GGG | 0.656151 | 8_3:-60352965 | None:intergenic |
| ACCGATCGAGGACATGACCC+GGG | 0.657365 | 8_3:-60350860 | None:intergenic |
| AGGTTGAAAGGGGATTGGAG+TGG | 0.659965 | 8_3:+60351076 | Msa1299260:CDS |
| GTTGCAGGGTTTGAAAACGG+TGG | 0.662672 | 8_3:+60351015 | Msa1299260:CDS |
| TAATGTTGATGGGAGGCATG+TGG | 0.664346 | 8_3:+60352701 | Msa1299260:CDS |
| GGGTCGTTTCTCGGGTTTCG+GGG | 0.665751 | 8_3:-60350840 | None:intergenic |
| AAGTGTGAGAAGTGGATTGG+GGG | 0.670079 | 8_3:+60352525 | Msa1299260:CDS |
| GGATGGCTGTGAGAAAGTCA+TGG | 0.678801 | 8_3:+60353037 | Msa1299260:CDS |
| TGGAAGGTGAAGACCCACCA+AGG | 0.679710 | 8_3:+60351035 | Msa1299260:CDS |
| CCGGTAACCGAAACCGATCG+AGG | 0.681265 | 8_3:-60350872 | None:intergenic |
| GGAAACCGTTGAGTTCGGAA+GGG | 0.685038 | 8_3:+60350972 | Msa1299260:CDS |
| TGAGATAACCAAATATAACA+AGG | 0.691015 | 8_3:-60354541 | None:intergenic |
| CACCATATGCTAATGGACCG+GGG | 0.698743 | 8_3:+60353966 | Msa1299260:CDS |
| CAACATGAGATAACAAAGTG+GGG | 0.701175 | 8_3:+60354367 | Msa1299260:exon |
| AGGATGTGTTGAAGGCAAGG+AGG | 0.709548 | 8_3:-60352896 | None:intergenic |
| GAGAGCGAGAACAACAACAA+AGG | 0.713379 | 8_3:+60350493 | Msa1299260:CDS |
| TCATAAGACAGAATATACCC+CGG | 0.731870 | 8_3:-60353983 | None:intergenic |
| CCTTGTTGTGTTGAAAACAG+TGG | 0.740634 | 8_3:+60353291 | Msa1299260:CDS |
| GTTAGGGTCGCATATAACGG+TGG | 0.757697 | 8_3:+60350946 | Msa1299260:CDS |
| TAAATGGGCTGTGACATACG+AGG | 0.770509 | 8_3:+60353577 | Msa1299260:CDS |
| TCTTGCTATAGGATGCAGTG+GGG | 0.787501 | 8_3:+60351121 | Msa1299260:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGATTATATATTATATTTTG+TGG | + | chr8_3:60352280-60352299 | Msa1299260:intron | 10.0% |
| !! | AAAAATAAATAAATTTCAAG+AGG | + | chr8_3:60353364-60353383 | Msa1299260:intron | 10.0% |
| !! | TTCATCTATAAATTAAAAAA+TGG | - | chr8_3:60354402-60354421 | None:intergenic | 10.0% |
| !!! | TAAAGTATAGATTTTGATTT+TGG | + | chr8_3:60351240-60351259 | Msa1299260:intron | 15.0% |
| !!! | AAAGTATAGATTTTGATTTT+GGG | + | chr8_3:60351241-60351260 | Msa1299260:intron | 15.0% |
| !!! | TTGAGAATATTGATTTTTAT+TGG | + | chr8_3:60353904-60353923 | Msa1299260:intron | 15.0% |
| !! | TCGTATATTTGTAAATATAT+CGG | + | chr8_3:60354456-60354475 | Msa1299260:three_prime_UTR | 15.0% |
| !!! | ATGAAATTTTTTTATCAGAA+GGG | - | chr8_3:60354516-60354535 | None:intergenic | 15.0% |
| !!! | AATGAAATTTTTTTATCAGA+AGG | - | chr8_3:60354517-60354536 | None:intergenic | 15.0% |
| !!! | TATGATATTTTAAGAGTCAA+AGG | - | chr8_3:60350435-60350454 | None:intergenic | 20.0% |
| !!! | ATTGGAAATTTTACATAAGT+CGG | + | chr8_3:60351347-60351366 | Msa1299260:intron | 20.0% |
| !!! | GTAATTTGTAACATTGTTTA+TGG | + | chr8_3:60351442-60351461 | Msa1299260:intron | 20.0% |
| !!! | TATATTTTGTGGATAAAAAG+TGG | + | chr8_3:60352291-60352310 | Msa1299260:intron | 20.0% |
| !! | ACAAAAGCAAAATTAAGAAA+TGG | - | chr8_3:60352795-60352814 | None:intergenic | 20.0% |
| !!! | CTTAATTTTGCTTTTGTAAT+TGG | + | chr8_3:60352798-60352817 | Msa1299260:intron | 20.0% |
| !! | AATAAAGCATGAAATCAAAA+GGG | - | chr8_3:60353142-60353161 | None:intergenic | 20.0% |
| !! | TAATAAAGCATGAAATCAAA+AGG | - | chr8_3:60353143-60353162 | None:intergenic | 20.0% |
| !!! | CATGCTTTATTATTTTCTTA+CGG | + | chr8_3:60353151-60353170 | Msa1299260:intron | 20.0% |
| !!! | ATGCTTTATTATTTTCTTAC+GGG | + | chr8_3:60353152-60353171 | Msa1299260:intron | 20.0% |
| !!! | TCTGCATTAATTTCTATTTT+CGG | - | chr8_3:60353208-60353227 | None:intergenic | 20.0% |
| !!! | AATTTGAGAAGCATAAATTA+AGG | + | chr8_3:60354029-60354048 | Msa1299260:CDS | 20.0% |
| !!! | ATTTGAGAAGCATAAATTAA+GGG | + | chr8_3:60354030-60354049 | Msa1299260:CDS | 20.0% |
| !! | TTATTTGCAGTTGTTTAAAA+TGG | + | chr8_3:60354160-60354179 | Msa1299260:intron | 20.0% |
| !!! | AAATTTTTGCACTGTATAAA+TGG | + | chr8_3:60354490-60354509 | Msa1299260:three_prime_UTR | 20.0% |
| !!! | ATAAGGAACTTGTTTTAAAG+TGG | - | chr8_3:60350352-60350371 | None:intergenic | 25.0% |
| ! | GCATTCTAGTAGTAAAATTA+CGG | - | chr8_3:60350381-60350400 | None:intergenic | 25.0% |
| !!! | ATATTTTAAGAGTCAAAGGA+AGG | - | chr8_3:60350431-60350450 | None:intergenic | 25.0% |
| ! | GATGATTATGAGAATTTGAA+AGG | - | chr8_3:60350555-60350574 | None:intergenic | 25.0% |
| !!! | TGGTTTTGTTGAAAACAAAA+GGG | - | chr8_3:60350613-60350632 | None:intergenic | 25.0% |
| !!! | TTCCAAAGAGTATCAATTAT+CGG | + | chr8_3:60350751-60350770 | Msa1299260:CDS | 25.0% |
| !!! | AGGGAAAAATCACTTTTTTT+TGG | + | chr8_3:60350991-60351010 | Msa1299260:CDS | 25.0% |
| !!! | TTTAAGTTGAATATGCATGT+TGG | + | chr8_3:60351273-60351292 | Msa1299260:intron | 25.0% |
| ! | AAGACATAGAACAACTATTA+AGG | + | chr8_3:60351387-60351406 | Msa1299260:intron | 25.0% |
| ! | TTGTTTATGGTAGAACATTA+TGG | + | chr8_3:60351455-60351474 | Msa1299260:intron | 25.0% |
| !! | TTGTTCATTTAGAGTTACTT+TGG | + | chr8_3:60351691-60351710 | Msa1299260:intron | 25.0% |
| ! | TGTTAATGTCAGTTATTATG+TGG | + | chr8_3:60351794-60351813 | Msa1299260:intron | 25.0% |
| ! | GTTAATGTCAGTTATTATGT+GGG | + | chr8_3:60351795-60351814 | Msa1299260:intron | 25.0% |
| ! | TTCAATACTTCAAATTCATG+CGG | + | chr8_3:60351893-60351912 | Msa1299260:intron | 25.0% |
| ! | CAAGTTCAATATAAAACTAC+CGG | - | chr8_3:60352011-60352030 | None:intergenic | 25.0% |
| !!! | AAGTTTCTAGTTGTAGATTT+GGG | + | chr8_3:60352151-60352170 | Msa1299260:intron | 25.0% |
| ! | TCAAAGATTCAAAGATAAAC+TGG | - | chr8_3:60352427-60352446 | None:intergenic | 25.0% |
| !!! | CAATCAACTGTTACTTTTTT+CGG | - | chr8_3:60352612-60352631 | None:intergenic | 25.0% |
| !!! | ATAGCTTGTTCTCATTAAAT+GGG | - | chr8_3:60352641-60352660 | None:intergenic | 25.0% |
| !!! | AATAGCTTGTTCTCATTAAA+TGG | - | chr8_3:60352642-60352661 | None:intergenic | 25.0% |
| !!! | GCTATCATTTTAATGTTGAT+GGG | + | chr8_3:60352691-60352710 | Msa1299260:CDS | 25.0% |
| ! | AATGGTACAAATCAAAATTC+TGG | - | chr8_3:60352777-60352796 | None:intergenic | 25.0% |
| !!! | TGCTTTATTATTTTCTTACG+GGG | + | chr8_3:60353153-60353172 | Msa1299260:intron | 25.0% |
| !! | CTGCATTAATTTCTATTTTC+GGG | - | chr8_3:60353207-60353226 | None:intergenic | 25.0% |
| !!! | TTTTTTTCGTTGTTAAAGAG+CGG | + | chr8_3:60353621-60353640 | Msa1299260:intron | 25.0% |
| ! | TTATAACCAGCAATAAGTAA+TGG | - | chr8_3:60353875-60353894 | None:intergenic | 25.0% |
| ! | TTAAACAACTGCAAATAAGA+GGG | - | chr8_3:60354158-60354177 | None:intergenic | 25.0% |
| ! | TTTAAACAACTGCAAATAAG+AGG | - | chr8_3:60354159-60354178 | None:intergenic | 25.0% |
| !! | CATTAACACCTTGTTATATT+TGG | + | chr8_3:60354533-60354552 | Msa1299260:three_prime_UTR | 25.0% |
| ! | TGAGATAACCAAATATAACA+AGG | - | chr8_3:60354544-60354563 | None:intergenic | 25.0% |
| TAAAATTACGGTCGCAAATA+AGG | - | chr8_3:60350369-60350388 | None:intergenic | 30.0% | |
| !!! | GTGGTTTTGTTGAAAACAAA+AGG | - | chr8_3:60350614-60350633 | None:intergenic | 30.0% |
| TATCAATTATCGGTCAAAGA+TGG | + | chr8_3:60350761-60350780 | Msa1299260:CDS | 30.0% | |
| ATTTCAATCCAAGGTTGAAA+GGG | + | chr8_3:60351065-60351084 | Msa1299260:CDS | 30.0% | |
| CAAGAATTAAGCTCAATAAC+AGG | - | chr8_3:60351106-60351125 | None:intergenic | 30.0% | |
| ! | TTGAGCTTAATTCTTGCTAT+AGG | + | chr8_3:60351110-60351129 | Msa1299260:CDS | 30.0% |
| AGATTTAGAGATCAATGAGT+TGG | + | chr8_3:60351411-60351430 | Msa1299260:intron | 30.0% | |
| CTTGCTTTGTAAAATTGACT+TGG | - | chr8_3:60351604-60351623 | None:intergenic | 30.0% | |
| ! | TGATGGTAATGTATACATGT+TGG | + | chr8_3:60351927-60351946 | Msa1299260:intron | 30.0% |
| ! | AACTAAGTTGACTGTGTAAA+GGG | + | chr8_3:60352081-60352100 | Msa1299260:intron | 30.0% |
| !! | GAAGTTTCTAGTTGTAGATT+TGG | + | chr8_3:60352150-60352169 | Msa1299260:intron | 30.0% |
| !! | AGTTTCTAGTTGTAGATTTG+GGG | + | chr8_3:60352152-60352171 | Msa1299260:intron | 30.0% |
| !!! | TTTTGATCTGTTTCTAACCA+TGG | - | chr8_3:60352207-60352226 | None:intergenic | 30.0% |
| ATGATTCTACTGTTACTATG+TGG | + | chr8_3:60352356-60352375 | Msa1299260:intron | 30.0% | |
| TGATTCTACTGTTACTATGT+GGG | + | chr8_3:60352357-60352376 | Msa1299260:intron | 30.0% | |
| ! | TTGTGTTTGAAACAGTTGAT+GGG | + | chr8_3:60352496-60352515 | Msa1299260:intron | 30.0% |
| CAGAAGAGTTTGTATCAAAA+TGG | + | chr8_3:60352562-60352581 | Msa1299260:CDS | 30.0% | |
| AAGAGTTTGTATCAAAATGG+TGG | + | chr8_3:60352565-60352584 | Msa1299260:CDS | 30.0% | |
| CGAAAAAAGTAACAGTTGAT+TGG | + | chr8_3:60352610-60352629 | Msa1299260:CDS | 30.0% | |
| TTGTTCTCATTAAATGGGAA+TGG | - | chr8_3:60352636-60352655 | None:intergenic | 30.0% | |
| !! | GGCTATCATTTTAATGTTGA+TGG | + | chr8_3:60352690-60352709 | Msa1299260:CDS | 30.0% |
| !! | ATCATTTTAATGTTGATGGG+AGG | + | chr8_3:60352694-60352713 | Msa1299260:CDS | 30.0% |
| GAAATATTAGGATGTGTTGA+AGG | - | chr8_3:60352907-60352926 | None:intergenic | 30.0% | |
| ! | ATCTTGAATTTTCAACCAGA+TGG | + | chr8_3:60352938-60352957 | Msa1299260:CDS | 30.0% |
| TCTTATCAAATCTTCAGAAG+TGG | + | chr8_3:60353071-60353090 | Msa1299260:CDS | 30.0% | |
| AATTAATGCAGAGTTGAAGA+AGG | + | chr8_3:60353216-60353235 | Msa1299260:CDS | 30.0% | |
| !!! | AAGAAGGAAGCAGAATTTTT+TGG | + | chr8_3:60353232-60353251 | Msa1299260:CDS | 30.0% |
| TATTGTTATAGTGCCTTACA+TGG | + | chr8_3:60353258-60353277 | Msa1299260:CDS | 30.0% | |
| TAAATTTCAAGAGGAATCAG+AGG | + | chr8_3:60353373-60353392 | Msa1299260:intron | 30.0% | |
| ATTCAATGGGTGCTTATATT+GGG | + | chr8_3:60353519-60353538 | Msa1299260:CDS | 30.0% | |
| AACGAAAAAAACATTGCATC+AGG | - | chr8_3:60353612-60353631 | None:intergenic | 30.0% | |
| !!! | TTTTTTCGTTGTTAAAGAGC+GGG | + | chr8_3:60353622-60353641 | Msa1299260:intron | 30.0% |
| GAGAAAAACTTAAATACAGC+TGG | - | chr8_3:60353853-60353872 | None:intergenic | 30.0% | |
| ! | TTTTCTCCATTACTTATTGC+TGG | + | chr8_3:60353866-60353885 | Msa1299260:intron | 30.0% |
| TAAACAACTGCAAATAAGAG+GGG | - | chr8_3:60354157-60354176 | None:intergenic | 30.0% | |
| TAAAATGGAAGATGTGAGTA+TGG | + | chr8_3:60354175-60354194 | Msa1299260:CDS | 30.0% | |
| AAAATGGAAGATGTGAGTAT+GGG | + | chr8_3:60354176-60354195 | Msa1299260:CDS | 30.0% | |
| AACAAATGACCAACTAGAAA+GGG | - | chr8_3:60354572-60354591 | None:intergenic | 30.0% | |
| AAACAAATGACCAACTAGAA+AGG | - | chr8_3:60354573-60354592 | None:intergenic | 30.0% | |
| ! | TTCTAGTTGGTCATTTGTTT+CGG | + | chr8_3:60354573-60354592 | Msa1299260:three_prime_UTR | 30.0% |
| CAAACATACTGCTAAGATTA+AGG | + | chr8_3:60354633-60354652 | Msa1299260:three_prime_UTR | 30.0% | |
| !! | ATACTCTTTGGAATCGAATG+CGG | - | chr8_3:60350744-60350763 | None:intergenic | 35.0% |
| GACCGATAATTGATACTCTT+TGG | - | chr8_3:60350756-60350775 | None:intergenic | 35.0% | |
| !!! | TCACTTTTTTTTGGAGTTGC+AGG | + | chr8_3:60351000-60351019 | Msa1299260:CDS | 35.0% |
| !!! | CACTTTTTTTTGGAGTTGCA+GGG | + | chr8_3:60351001-60351020 | Msa1299260:CDS | 35.0% |
| TGAAATGCAAAATCCTTGGT+GGG | - | chr8_3:60351051-60351070 | None:intergenic | 35.0% | |
| TTGAAATGCAAAATCCTTGG+TGG | - | chr8_3:60351052-60351071 | None:intergenic | 35.0% | |
| GGATTGAAATGCAAAATCCT+TGG | - | chr8_3:60351055-60351074 | None:intergenic | 35.0% | |
| ! | GGATTTTGCATTTCAATCCA+AGG | + | chr8_3:60351056-60351075 | Msa1299260:CDS | 35.0% |
| CATTTCAATCCAAGGTTGAA+AGG | + | chr8_3:60351064-60351083 | Msa1299260:CDS | 35.0% | |
| TTTCAATCCAAGGTTGAAAG+GGG | + | chr8_3:60351066-60351085 | Msa1299260:CDS | 35.0% | |
| ! | TGAATATGCATGTTGGTTAG+TGG | + | chr8_3:60351280-60351299 | Msa1299260:intron | 35.0% |
| TGACTTGAAGTGATTTGAGT+TGG | + | chr8_3:60351324-60351343 | Msa1299260:intron | 35.0% | |
| !! | TGAAGTGATTTGAGTTGGAT+TGG | + | chr8_3:60351329-60351348 | Msa1299260:intron | 35.0% |
| TATGAAATTGTGCCATAGTC+CGG | + | chr8_3:60351843-60351862 | Msa1299260:intron | 35.0% | |
| TGCATACATCAAAGATGAAC+CGG | - | chr8_3:60351865-60351884 | None:intergenic | 35.0% | |
| CAGTCAACTTAGTTGTAACT+GGG | - | chr8_3:60352075-60352094 | None:intergenic | 35.0% | |
| ACAGTCAACTTAGTTGTAAC+TGG | - | chr8_3:60352076-60352095 | None:intergenic | 35.0% | |
| ! | CAACTAAGTTGACTGTGTAA+AGG | + | chr8_3:60352080-60352099 | Msa1299260:intron | 35.0% |
| !! | GGTTCACCATGTGTTTTTAA+AGG | + | chr8_3:60352173-60352192 | Msa1299260:intron | 35.0% |
| ! | GACTGACCTTTAAAAACACA+TGG | - | chr8_3:60352182-60352201 | None:intergenic | 35.0% |
| TTTGTCAAATGTTGACGAAG+TGG | + | chr8_3:60352257-60352276 | Msa1299260:intron | 35.0% | |
| ACTGTTACTATGTGGGAATA+TGG | + | chr8_3:60352364-60352383 | Msa1299260:intron | 35.0% | |
| TTCAAAGATAAACTGGACCA+TGG | - | chr8_3:60352420-60352439 | None:intergenic | 35.0% | |
| CAAGCAACAACTCAATTTAG+AGG | - | chr8_3:60352479-60352498 | None:intergenic | 35.0% | |
| ! | CTTGTGTTTGAAACAGTTGA+TGG | + | chr8_3:60352495-60352514 | Msa1299260:intron | 35.0% |
| TTTGTTCTTACTGTTAGTGC+TGG | + | chr8_3:60352660-60352679 | Msa1299260:CDS | 35.0% | |
| !! | TTTGCTTTTGTAATTGGAGC+AGG | + | chr8_3:60352804-60352823 | Msa1299260:intron | 35.0% |
| !! | TTGCTTTTGTAATTGGAGCA+GGG | + | chr8_3:60352805-60352824 | Msa1299260:intron | 35.0% |
| AACAATTCGACACCAAAGTT+AGG | - | chr8_3:60352979-60352998 | None:intergenic | 35.0% | |
| !! | TTTGGTGTCGAATTGTTCAT+CGG | + | chr8_3:60352982-60353001 | Msa1299260:CDS | 35.0% |
| TATCAAATCTTCAGAAGTGG+TGG | + | chr8_3:60353074-60353093 | Msa1299260:CDS | 35.0% | |
| ACAGTGGCTATATGTGAATA+TGG | + | chr8_3:60353307-60353326 | Msa1299260:CDS | 35.0% | |
| CAGTGGCTATATGTGAATAT+GGG | + | chr8_3:60353308-60353327 | Msa1299260:CDS | 35.0% | |
| AGTGGCTATATGTGAATATG+GGG | + | chr8_3:60353309-60353328 | Msa1299260:CDS | 35.0% | |
| AGATGTGCTACATTGTTTGT+AGG | + | chr8_3:60353403-60353422 | Msa1299260:intron | 35.0% | |
| ! | GTAGGTTAATAGAGTATCTG+CGG | + | chr8_3:60353421-60353440 | Msa1299260:intron | 35.0% |
| ! | TGATGACACATTTGTTAGAG+TGG | + | chr8_3:60353463-60353482 | Msa1299260:CDS | 35.0% |
| ATGCTGTTATAGACGAAGTA+AGG | + | chr8_3:60353486-60353505 | Msa1299260:CDS | 35.0% | |
| TGTTATAGACGAAGTAAGGA+AGG | + | chr8_3:60353490-60353509 | Msa1299260:CDS | 35.0% | |
| ATATAAGCACCCATTGAATC+TGG | - | chr8_3:60353518-60353537 | None:intergenic | 35.0% | |
| GATTCAATGGGTGCTTATAT+TGG | + | chr8_3:60353518-60353537 | Msa1299260:CDS | 35.0% | |
| AAACTTAGATGCAGTGTTGT+AGG | + | chr8_3:60353705-60353724 | Msa1299260:intron | 35.0% | |
| ! | TTTGATGATCCTCTCACAAA+GGG | - | chr8_3:60353818-60353837 | None:intergenic | 35.0% |
| !! | TTTTGATGATCCTCTCACAA+AGG | - | chr8_3:60353819-60353838 | None:intergenic | 35.0% |
| !!! | ATTGGTTGCCTTTTGTTTTC+AGG | + | chr8_3:60353922-60353941 | Msa1299260:intron | 35.0% |
| GATTATCCACCATATGCTAA+TGG | + | chr8_3:60353959-60353978 | Msa1299260:CDS | 35.0% | |
| TCATAAGACAGAATATACCC+CGG | - | chr8_3:60353986-60354005 | None:intergenic | 35.0% | |
| ! | TGTTATTTGATCAAGTCTCC+AGG | + | chr8_3:60354091-60354110 | Msa1299260:intron | 35.0% |
| TGCAACATGAGATAACAAAG+TGG | + | chr8_3:60354365-60354384 | Msa1299260:exon | 35.0% | |
| GCAACATGAGATAACAAAGT+GGG | + | chr8_3:60354366-60354385 | Msa1299260:exon | 35.0% | |
| CAACATGAGATAACAAAGTG+GGG | + | chr8_3:60354367-60354386 | Msa1299260:exon | 35.0% | |
| ! | CTAGGATTGGTAAGATGAAA+GGG | + | chr8_3:60354596-60354615 | Msa1299260:three_prime_UTR | 35.0% |
| ! | TCAACACACCTTTTAATGTG+AGG | + | chr8_3:60354659-60354678 | Msa1299260:three_prime_UTR | 35.0% |
| AGGAAGGTTTGTGTTTGAGT+CGG | - | chr8_3:60350415-60350434 | None:intergenic | 40.0% | |
| GGATCGTTGTTTACAAAGAG+AGG | - | chr8_3:60350534-60350553 | None:intergenic | 40.0% | |
| ! | TCAGCTTTGTGATGAGTACT+AGG | - | chr8_3:60350689-60350708 | None:intergenic | 40.0% |
| !! | AAAGCTGATTCGATTCTCTC+TGG | + | chr8_3:60350701-60350720 | Msa1299260:CDS | 40.0% |
| TCAAAGATGGAAAACGCGTT+TGG | + | chr8_3:60350774-60350793 | Msa1299260:CDS | 40.0% | |
| !! | AGTTTGATGGTGATTCCATG+TGG | + | chr8_3:60350917-60350936 | Msa1299260:CDS | 40.0% |
| !! | GTTTGATGGTGATTCCATGT+GGG | + | chr8_3:60350918-60350937 | Msa1299260:CDS | 40.0% |
| ! | TTTTTCCCTTCCGAACTCAA+CGG | - | chr8_3:60350980-60350999 | None:intergenic | 40.0% |
| ! | ATTCTTGCTATAGGATGCAG+TGG | + | chr8_3:60351119-60351138 | Msa1299260:CDS | 40.0% |
| ! | TTCTTGCTATAGGATGCAGT+GGG | + | chr8_3:60351120-60351139 | Msa1299260:CDS | 40.0% |
| !! | GGTACTTCTTTGAGATGTGA+TGG | + | chr8_3:60351142-60351161 | Msa1299260:CDS | 40.0% |
| !! | CTTCTTTGAGATGTGATGGT+TGG | + | chr8_3:60351146-60351165 | Msa1299260:CDS | 40.0% |
| GATGTGATGGTTGGAAATCT+CGG | + | chr8_3:60351155-60351174 | Msa1299260:CDS | 40.0% | |
| ATGTGATGGTTGGAAATCTC+GGG | + | chr8_3:60351156-60351175 | Msa1299260:CDS | 40.0% | |
| AGTCGGATTACTAGAGACAT+AGG | + | chr8_3:60351364-60351383 | Msa1299260:intron | 40.0% | |
| ATCAAAGATGAACCGGACTA+TGG | - | chr8_3:60351858-60351877 | None:intergenic | 40.0% | |
| ATGCGGAATGAATAGAGTGA+TGG | + | chr8_3:60351910-60351929 | Msa1299260:intron | 40.0% | |
| ! | ATCACCGCTTGAAAGTTTTC+CGG | + | chr8_3:60351989-60352008 | Msa1299260:intron | 40.0% |
| ACTACCGGAAAACTTTCAAG+CGG | - | chr8_3:60351996-60352015 | None:intergenic | 40.0% | |
| !! | TTTTAAAGGTCAGTCGACCA+TGG | + | chr8_3:60352187-60352206 | Msa1299260:intron | 40.0% |
| CATGGCATAATTACACTACG+AGG | - | chr8_3:60352402-60352421 | None:intergenic | 40.0% | |
| CTCGTAGTGTAATTATGCCA+TGG | + | chr8_3:60352400-60352419 | Msa1299260:intron | 40.0% | |
| ! | TGAAGTGTGAGAAGTGGATT+GGG | + | chr8_3:60352523-60352542 | Msa1299260:CDS | 40.0% |
| TGGTGGTTGAATAGATTCGT+AGG | + | chr8_3:60352582-60352601 | Msa1299260:CDS | 40.0% | |
| GGTTGAATAGATTCGTAGGT+CGG | + | chr8_3:60352586-60352605 | Msa1299260:CDS | 40.0% | |
| ! | TCTTACTGTTAGTGCTGGAT+TGG | + | chr8_3:60352665-60352684 | Msa1299260:CDS | 40.0% |
| TCATTACTCACAGTGCGATA+AGG | - | chr8_3:60352735-60352754 | None:intergenic | 40.0% | |
| TTTACTCTTGAGGATGCTAC+TGG | + | chr8_3:60352829-60352848 | Msa1299260:CDS | 40.0% | |
| AGGAGGCAGCAAATATAGAA+TGG | - | chr8_3:60352882-60352901 | None:intergenic | 40.0% | |
| ATTAGGATGTGTTGAAGGCA+AGG | - | chr8_3:60352902-60352921 | None:intergenic | 40.0% | |
| TGCTGCTGTGGAGAAATATT+AGG | - | chr8_3:60352919-60352938 | None:intergenic | 40.0% | |
| GAAAATTCAAGATGCTGCTG+TGG | - | chr8_3:60352931-60352950 | None:intergenic | 40.0% | |
| AGGTCGTACTTATCCATGTA+AGG | - | chr8_3:60353274-60353293 | None:intergenic | 40.0% | |
| ! | CCACTGTTTTCAACACAACA+AGG | - | chr8_3:60353294-60353313 | None:intergenic | 40.0% |
| ! | CCTTGTTGTGTTGAAAACAG+TGG | + | chr8_3:60353291-60353310 | Msa1299260:CDS | 40.0% |
| AAGGAAGGTTCCAGATTCAA+TGG | + | chr8_3:60353505-60353524 | Msa1299260:CDS | 40.0% | |
| AGGAAGGTTCCAGATTCAAT+GGG | + | chr8_3:60353506-60353525 | Msa1299260:CDS | 40.0% | |
| AACCTTTGCGCTATGGTAAA+TGG | + | chr8_3:60353561-60353580 | Msa1299260:CDS | 40.0% | |
| ACCTTTGCGCTATGGTAAAT+GGG | + | chr8_3:60353562-60353581 | Msa1299260:CDS | 40.0% | |
| ! | TTGATGATCCTCTCACAAAG+GGG | - | chr8_3:60353817-60353836 | None:intergenic | 40.0% |
| !!! | TTGCCTTTTGTTTTCAGGAG+TGG | + | chr8_3:60353927-60353946 | Msa1299260:intron | 40.0% |
| !! | TATGGTGGATAATCCTCTTC+AGG | - | chr8_3:60353953-60353972 | None:intergenic | 40.0% |
| AAGATGTGAGTATGGGAATG+TGG | + | chr8_3:60354183-60354202 | Msa1299260:CDS | 40.0% | |
| AGATGTGAGTATGGGAATGT+GGG | + | chr8_3:60354184-60354203 | Msa1299260:CDS | 40.0% | |
| AGCTTAAGATTCTGCCAGTT+TGG | + | chr8_3:60354248-60354267 | Msa1299260:CDS | 40.0% | |
| AACCTTCTATACAGCCAAAC+TGG | - | chr8_3:60354265-60354284 | None:intergenic | 40.0% | |
| TATCTCATGTTGCAGCATTG+AGG | - | chr8_3:60354359-60354378 | None:intergenic | 40.0% | |
| ! | CTCATCTTTCCCTTTCTAGT+TGG | + | chr8_3:60354560-60354579 | Msa1299260:three_prime_UTR | 40.0% |
| TCATTTGTTTCGGCTAGGAT+TGG | + | chr8_3:60354583-60354602 | Msa1299260:three_prime_UTR | 40.0% | |
| ! | GCTAGGATTGGTAAGATGAA+AGG | + | chr8_3:60354595-60354614 | Msa1299260:three_prime_UTR | 40.0% |
| ATTGGTAAGATGAAAGGGAG+TGG | + | chr8_3:60354601-60354620 | Msa1299260:three_prime_UTR | 40.0% | |
| AAGGTTTGTGTTTGAGTCGG+CGG | - | chr8_3:60350412-60350431 | None:intergenic | 45.0% | |
| GAGAGCGAGAACAACAACAA+AGG | + | chr8_3:60350493-60350512 | Msa1299260:CDS | 45.0% | |
| ! | ATTCCATGTGGGTTGACGTT+AGG | + | chr8_3:60350929-60350948 | Msa1299260:CDS | 45.0% |
| ! | TTCCATGTGGGTTGACGTTA+GGG | + | chr8_3:60350930-60350949 | Msa1299260:CDS | 45.0% |
| GACGTTAGGGTCGCATATAA+CGG | + | chr8_3:60350943-60350962 | Msa1299260:CDS | 45.0% | |
| GGAGTTGCAGGGTTTGAAAA+CGG | + | chr8_3:60351012-60351031 | Msa1299260:CDS | 45.0% | |
| ATCCAAGGTTGAAAGGGGAT+TGG | + | chr8_3:60351071-60351090 | Msa1299260:CDS | 45.0% | |
| ! | TCTTGCTATAGGATGCAGTG+GGG | + | chr8_3:60351121-60351140 | Msa1299260:CDS | 45.0% |
| TGATTCATGTAGCCGCTTAG+TGG | + | chr8_3:60351485-60351504 | Msa1299260:intron | 45.0% | |
| GATTCATGTAGCCGCTTAGT+GGG | + | chr8_3:60351486-60351505 | Msa1299260:intron | 45.0% | |
| ! | CCAAGTCTTATCCCACTAAG+CGG | - | chr8_3:60351500-60351519 | None:intergenic | 45.0% |
| AAACGTGAGAAGCTACAGCT+TGG | - | chr8_3:60351673-60351692 | None:intergenic | 45.0% | |
| GAAACTTCCCTACCAATGCA+CGG | - | chr8_3:60352138-60352157 | None:intergenic | 45.0% | |
| !! | GTTTGAAACAGTTGATGGGC+AGG | + | chr8_3:60352500-60352519 | Msa1299260:intron | 45.0% |
| GTGAAGTGTGAGAAGTGGAT+TGG | + | chr8_3:60352522-60352541 | Msa1299260:CDS | 45.0% | |
| !! | GAAGTGTGAGAAGTGGATTG+GGG | + | chr8_3:60352524-60352543 | Msa1299260:CDS | 45.0% |
| !! | AAGTGTGAGAAGTGGATTGG+GGG | + | chr8_3:60352525-60352544 | Msa1299260:CDS | 45.0% |
| ! | TACTGTTAGTGCTGGATTGG+AGG | + | chr8_3:60352668-60352687 | Msa1299260:CDS | 45.0% |
| ! | ACTGTTAGTGCTGGATTGGA+GGG | + | chr8_3:60352669-60352688 | Msa1299260:CDS | 45.0% |
| ! | TAATGTTGATGGGAGGCATG+TGG | + | chr8_3:60352701-60352720 | Msa1299260:CDS | 45.0% |
| ! | ACCAAAGTTAGGTAGTGGTG+GGG | - | chr8_3:60352968-60352987 | None:intergenic | 45.0% |
| ! | CACCAAAGTTAGGTAGTGGT+GGG | - | chr8_3:60352969-60352988 | None:intergenic | 45.0% |
| ! | ACACCAAAGTTAGGTAGTGG+TGG | - | chr8_3:60352970-60352989 | None:intergenic | 45.0% |
| TCGACACCAAAGTTAGGTAG+TGG | - | chr8_3:60352973-60352992 | None:intergenic | 45.0% | |
| CGAAATGGTTTCCAGCTGAT+AGG | - | chr8_3:60353011-60353030 | None:intergenic | 45.0% | |
| TACCATAGCGCAAAGGTTTG+TGG | - | chr8_3:60353559-60353578 | None:intergenic | 45.0% | |
| !! | TAAATGGGCTGTGACATACG+AGG | + | chr8_3:60353577-60353596 | Msa1299260:CDS | 45.0% |
| TTAAAGAGCGGGAGTTGTCT+TGG | + | chr8_3:60353633-60353652 | Msa1299260:intron | 45.0% | |
| CTTAGATGCAGTGTTGTAGG+TGG | + | chr8_3:60353708-60353727 | Msa1299260:intron | 45.0% | |
| AAAAACTGCCCCTTTGTGAG+AGG | + | chr8_3:60353806-60353825 | Msa1299260:intron | 45.0% | |
| AGGCCACTCCTGAAAACAAA+AGG | - | chr8_3:60353933-60353952 | None:intergenic | 45.0% | |
| ! | TCCACCATATGCTAATGGAC+CGG | + | chr8_3:60353964-60353983 | Msa1299260:CDS | 45.0% |
| TGCCAGTTTGGCTGTATAGA+AGG | + | chr8_3:60354260-60354279 | Msa1299260:CDS | 45.0% | |
| CAGCTCATTACCAATCTCCA+AGG | + | chr8_3:60354291-60354310 | Msa1299260:CDS | 45.0% | |
| ACATCATCTGCCTTGGAGAT+TGG | - | chr8_3:60354304-60354323 | None:intergenic | 45.0% | |
| AAGGCAGATGATGTGCCTTT+GGG | + | chr8_3:60354310-60354329 | Msa1299260:CDS | 45.0% | |
| !! | GCCTTTGGGATAAATTGCAG+CGG | + | chr8_3:60354324-60354343 | Msa1299260:CDS | 45.0% |
| TCCGCTGCAATTTATCCCAA+AGG | - | chr8_3:60354328-60354347 | None:intergenic | 45.0% | |
| GTTGGTCATTTGTTTCGGCT+AGG | + | chr8_3:60354578-60354597 | Msa1299260:three_prime_UTR | 45.0% | |
| GTGCCTTTCAGAACGAGGTA+CGG | - | chr8_3:60350636-60350655 | None:intergenic | 50.0% | |
| AGAACGTGCCTTTCAGAACG+AGG | - | chr8_3:60350641-60350660 | None:intergenic | 50.0% | |
| TTTCGGGGCGGTTTGAATTG+GGG | - | chr8_3:60350828-60350847 | None:intergenic | 50.0% | |
| GTTTCGGGGCGGTTTGAATT+GGG | - | chr8_3:60350829-60350848 | None:intergenic | 50.0% | |
| ! | GTCATGTCCTCGATCGGTTT+CGG | + | chr8_3:60350865-60350884 | Msa1299260:CDS | 50.0% |
| GTTAGGGTCGCATATAACGG+TGG | + | chr8_3:60350946-60350965 | Msa1299260:CDS | 50.0% | |
| GGTCGCATATAACGGTGGTT+GGG | + | chr8_3:60350951-60350970 | Msa1299260:CDS | 50.0% | |
| GGTTGGGAAACCGTTGAGTT+CGG | + | chr8_3:60350967-60350986 | Msa1299260:CDS | 50.0% | |
| GGAAACCGTTGAGTTCGGAA+GGG | + | chr8_3:60350972-60350991 | Msa1299260:CDS | 50.0% | |
| GTTGCAGGGTTTGAAAACGG+TGG | + | chr8_3:60351015-60351034 | Msa1299260:CDS | 50.0% | |
| CAGGGTTTGAAAACGGTGGA+AGG | + | chr8_3:60351019-60351038 | Msa1299260:CDS | 50.0% | |
| CTCCAATCCCCTTTCAACCT+TGG | - | chr8_3:60351076-60351095 | None:intergenic | 50.0% | |
| AGGTTGAAAGGGGATTGGAG+TGG | + | chr8_3:60351076-60351095 | Msa1299260:CDS | 50.0% | |
| GGTTGAAAGGGGATTGGAGT+GGG | + | chr8_3:60351077-60351096 | Msa1299260:CDS | 50.0% | |
| TCTCGGGCTGATCAAGATAC+TGG | + | chr8_3:60351172-60351191 | Msa1299260:CDS | 50.0% | |
| CCGCTTAGTGGGATAAGACT+TGG | + | chr8_3:60351497-60351516 | Msa1299260:intron | 50.0% | |
| TGAGTGTATGCACCGTGCAT+TGG | + | chr8_3:60352123-60352142 | Msa1299260:intron | 50.0% | |
| ! | TGTATGCACCGTGCATTGGT+AGG | + | chr8_3:60352127-60352146 | Msa1299260:intron | 50.0% |
| ! | GTATGCACCGTGCATTGGTA+GGG | + | chr8_3:60352128-60352147 | Msa1299260:intron | 50.0% |
| !! | AGTGGATTGGGGGAGATGAT+AGG | + | chr8_3:60352535-60352554 | Msa1299260:CDS | 50.0% |
| GCTACTGGACTCACTGTACA+TGG | + | chr8_3:60352844-60352863 | Msa1299260:CDS | 50.0% | |
| AGGATGTGTTGAAGGCAAGG+AGG | - | chr8_3:60352899-60352918 | None:intergenic | 50.0% | |
| TTCATCGGCATCCTATCAGC+TGG | + | chr8_3:60352997-60353016 | Msa1299260:CDS | 50.0% | |
| CTGGAAACCATTTCGCTGAG+CGG | + | chr8_3:60353016-60353035 | Msa1299260:CDS | 50.0% | |
| AAACCATTTCGCTGAGCGGA+TGG | + | chr8_3:60353020-60353039 | Msa1299260:CDS | 50.0% | |
| GGATGGCTGTGAGAAAGTCA+TGG | + | chr8_3:60353037-60353056 | Msa1299260:CDS | 50.0% | |
| GGCTCGTTTCTTTGTAGCAC+TGG | + | chr8_3:60353095-60353114 | Msa1299260:CDS | 50.0% | |
| TCTGCGGCGTACATCATGAA+AGG | + | chr8_3:60353437-60353456 | Msa1299260:CDS | 50.0% | |
| CACCACAAACCTTTGCGCTA+TGG | + | chr8_3:60353554-60353573 | Msa1299260:CDS | 50.0% | |
| GCCCATTTACCATAGCGCAA+AGG | - | chr8_3:60353566-60353585 | None:intergenic | 50.0% | |
| !! | TTTTCAGGAGTGGCCTGAAG+AGG | + | chr8_3:60353937-60353956 | Msa1299260:intron | 50.0% |
| ! | CCACCATATGCTAATGGACC+GGG | + | chr8_3:60353965-60353984 | Msa1299260:CDS | 50.0% |
| ! | CACCATATGCTAATGGACCG+GGG | + | chr8_3:60353966-60353985 | Msa1299260:CDS | 50.0% |
| TACCCCGGTCCATTAGCATA+TGG | - | chr8_3:60353971-60353990 | None:intergenic | 50.0% | |
| ! | CAAAGGCACATCATCTGCCT+TGG | - | chr8_3:60354311-60354330 | None:intergenic | 50.0% |
| CAAGGCAGATGATGTGCCTT+TGG | + | chr8_3:60354309-60354328 | Msa1299260:CDS | 50.0% | |
| GGTAAGATGAAAGGGAGTGG+TGG | + | chr8_3:60354604-60354623 | Msa1299260:three_prime_UTR | 50.0% | |
| TGTGTTTGAGTCGGCGGTGT+TGG | - | chr8_3:60350406-60350425 | None:intergenic | 55.0% | |
| CCTTTCAGAACGAGGTACGG+TGG | - | chr8_3:60350633-60350652 | None:intergenic | 55.0% | |
| ! | CCACCGTACCTCGTTCTGAA+AGG | + | chr8_3:60350630-60350649 | Msa1299260:CDS | 55.0% |
| GGTTTCGGGGCGGTTTGAAT+TGG | - | chr8_3:60350830-60350849 | None:intergenic | 55.0% | |
| ACATGACCCGGGTCGTTTCT+CGG | - | chr8_3:60350852-60350871 | None:intergenic | 55.0% | |
| AACCGATCGAGGACATGACC+CGG | - | chr8_3:60350864-60350883 | None:intergenic | 55.0% | |
| ! | CCTCGATCGGTTTCGGTTAC+CGG | + | chr8_3:60350872-60350891 | Msa1299260:CDS | 55.0% |
| ! | CTCGATCGGTTTCGGTTACC+GGG | + | chr8_3:60350873-60350892 | Msa1299260:CDS | 55.0% |
| ! | ATCGGTTTCGGTTACCGGGT+CGG | + | chr8_3:60350877-60350896 | Msa1299260:CDS | 55.0% |
| TGCGGCGAATGGGAGTTTGA+TGG | + | chr8_3:60350904-60350923 | Msa1299260:CDS | 55.0% | |
| GACCCTAACGTCAACCCACA+TGG | - | chr8_3:60350935-60350954 | None:intergenic | 55.0% | |
| GGGTCGCATATAACGGTGGT+TGG | + | chr8_3:60350950-60350969 | Msa1299260:CDS | 55.0% | |
| GGGAAACCGTTGAGTTCGGA+AGG | + | chr8_3:60350971-60350990 | Msa1299260:CDS | 55.0% | |
| TGGAAGGTGAAGACCCACCA+AGG | + | chr8_3:60351035-60351054 | Msa1299260:CDS | 55.0% | |
| CGTGAGAAGCTACAGCTTGG+AGG | - | chr8_3:60351670-60351689 | None:intergenic | 55.0% | |
| GGCAGGTGAAGTGTGAGAAG+TGG | + | chr8_3:60352517-60352536 | Msa1299260:CDS | 55.0% | |
| GGAGCAGGGCTTTACTCTTG+AGG | + | chr8_3:60352819-60352838 | Msa1299260:intron | 55.0% | |
| GCCCCACCACTACCTAACTT+TGG | + | chr8_3:60352964-60352983 | Msa1299260:CDS | 55.0% | |
| CCCGGTCCATTAGCATATGG+TGG | - | chr8_3:60353968-60353987 | None:intergenic | 55.0% | |
| ! | GAACGCACTATGCATCGACC+TGG | - | chr8_3:60354112-60354131 | None:intergenic | 55.0% |
| TCGTTTCTCGGGTTTCGGGG+CGG | - | chr8_3:60350840-60350859 | None:intergenic | 60.0% | |
| GGGTCGTTTCTCGGGTTTCG+GGG | - | chr8_3:60350843-60350862 | None:intergenic | 60.0% | |
| CGGGTCGTTTCTCGGGTTTC+GGG | - | chr8_3:60350844-60350863 | None:intergenic | 60.0% | |
| CCGGGTCGTTTCTCGGGTTT+CGG | - | chr8_3:60350845-60350864 | None:intergenic | 60.0% | |
| CCGAAACCCGAGAAACGACC+CGG | + | chr8_3:60350842-60350861 | Msa1299260:CDS | 60.0% | |
| CGAAACCCGAGAAACGACCC+GGG | + | chr8_3:60350843-60350862 | Msa1299260:CDS | 60.0% | |
| CATGACCCGGGTCGTTTCTC+GGG | - | chr8_3:60350851-60350870 | None:intergenic | 60.0% | |
| ACCCGGGTCATGTCCTCGAT+CGG | + | chr8_3:60350859-60350878 | Msa1299260:CDS | 60.0% | |
| ACCGATCGAGGACATGACCC+GGG | - | chr8_3:60350863-60350882 | None:intergenic | 60.0% | |
| CCGGTAACCGAAACCGATCG+AGG | - | chr8_3:60350875-60350894 | None:intergenic | 60.0% | |
| GGTTACCGGGTCGGAGTTTG+CGG | + | chr8_3:60350886-60350905 | Msa1299260:CDS | 60.0% | |
| ATTCGCCGCAAACTCCGACC+CGG | - | chr8_3:60350894-60350913 | None:intergenic | 60.0% | |
| GGTCGGAGTTTGCGGCGAAT+GGG | + | chr8_3:60350894-60350913 | Msa1299260:CDS | 60.0% | |
| CAGCCATCCGCTCAGCGAAA+TGG | - | chr8_3:60353026-60353045 | None:intergenic | 60.0% | |
| GGGTCGGAGTTTGCGGCGAA+TGG | + | chr8_3:60350893-60350912 | Msa1299260:CDS | 65.0% | |
| ! | TAGTGGTGGGGCACGCCATC+TGG | - | chr8_3:60352956-60352975 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 60350342 | 60354685 | 60350342 | ID=Msa1299260;Name=Msa1299260 |
| chr8_3 | mRNA | 60350342 | 60354685 | 60350342 | ID=Msa1299260-mRNA-1;Parent=Msa1299260;Name=Msa1299260-mRNA-1;_AED=0.03;_eAED=0.03;_QI=146|1|1|1|1|1|7|306|616 |
| chr8_3 | exon | 60350342 | 60351193 | 60350342 | ID=Msa1299260-mRNA-1:exon:17552;Parent=Msa1299260-mRNA-1 |
| chr8_3 | exon | 60352511 | 60352743 | 60352511 | ID=Msa1299260-mRNA-1:exon:17553;Parent=Msa1299260-mRNA-1 |
| chr8_3 | exon | 60352826 | 60353116 | 60352826 | ID=Msa1299260-mRNA-1:exon:17554;Parent=Msa1299260-mRNA-1 |
| chr8_3 | exon | 60353202 | 60353330 | 60353202 | ID=Msa1299260-mRNA-1:exon:17555;Parent=Msa1299260-mRNA-1 |
| chr8_3 | exon | 60353425 | 60353598 | 60353425 | ID=Msa1299260-mRNA-1:exon:17556;Parent=Msa1299260-mRNA-1 |
| chr8_3 | exon | 60353944 | 60354051 | 60353944 | ID=Msa1299260-mRNA-1:exon:17557;Parent=Msa1299260-mRNA-1 |
| chr8_3 | exon | 60354170 | 60354685 | 60354170 | ID=Msa1299260-mRNA-1:exon:17558;Parent=Msa1299260-mRNA-1 |
| chr8_3 | five_prime_UTR | 60350342 | 60350487 | 60350342 | ID=Msa1299260-mRNA-1:five_prime_utr;Parent=Msa1299260-mRNA-1 |
| chr8_3 | CDS | 60350488 | 60351193 | 60350488 | ID=Msa1299260-mRNA-1:cds;Parent=Msa1299260-mRNA-1 |
| chr8_3 | CDS | 60352511 | 60352743 | 60352511 | ID=Msa1299260-mRNA-1:cds;Parent=Msa1299260-mRNA-1 |
| chr8_3 | CDS | 60352826 | 60353116 | 60352826 | ID=Msa1299260-mRNA-1:cds;Parent=Msa1299260-mRNA-1 |
| chr8_3 | CDS | 60353202 | 60353330 | 60353202 | ID=Msa1299260-mRNA-1:cds;Parent=Msa1299260-mRNA-1 |
| chr8_3 | CDS | 60353425 | 60353598 | 60353425 | ID=Msa1299260-mRNA-1:cds;Parent=Msa1299260-mRNA-1 |
| chr8_3 | CDS | 60353944 | 60354051 | 60353944 | ID=Msa1299260-mRNA-1:cds;Parent=Msa1299260-mRNA-1 |
| chr8_3 | CDS | 60354170 | 60354379 | 60354170 | ID=Msa1299260-mRNA-1:cds;Parent=Msa1299260-mRNA-1 |
| chr8_3 | three_prime_UTR | 60354380 | 60354685 | 60354380 | ID=Msa1299260-mRNA-1:three_prime_utr;Parent=Msa1299260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
