Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1194190 | XP_013457855.1 | 98.214 | 616 | 10 | 1 | 1 | 616 | 1 | 615 | 0.0 | 1266 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1194190 | sp|Q8RX55|B3GTI_ARATH | 61.573 | 661 | 192 | 10 | 13 | 616 | 17 | 672 | 0.0 | 825 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0061500 | Msa1194190 | 0.834798 | 2.433020e-56 | -8.615850e-47 |
| Msa0111080 | Msa1194190 | 0.802128 | 6.497432e-49 | -8.615850e-47 |
| Msa0746210 | Msa1194190 | 0.807327 | 5.336054e-50 | -8.615850e-47 |
| Msa0152560 | Msa1194190 | 0.808087 | 3.678650e-50 | -8.615850e-47 |
| Msa0154920 | Msa1194190 | 0.825686 | 4.093982e-54 | -8.615850e-47 |
| Msa0161820 | Msa1194190 | 0.822767 | 1.986496e-53 | -8.615850e-47 |
| Msa0197610 | Msa1194190 | 0.804638 | 1.962269e-49 | -8.615850e-47 |
| Msa0388730 | Msa1194190 | 0.842923 | 1.922028e-58 | -8.615850e-47 |
| Msa0403770 | Msa1194190 | 0.810021 | 1.417811e-50 | -8.615850e-47 |
| Msa1071320 | Msa1194190 | 0.814808 | 1.275675e-51 | -8.615850e-47 |
| Msa1093100 | Msa1194190 | 0.802872 | 4.564216e-49 | -8.615850e-47 |
| Msa1194190 | Msa1221330 | 0.808980 | 2.372129e-50 | -8.615850e-47 |
| Msa1194190 | Msa1259540 | 0.968469 | 1.010069e-128 | -8.615850e-47 |
| Msa1194190 | Msa1299260 | 0.854761 | 9.926238e-62 | -8.615850e-47 |
| Msa1194190 | Msa1329800 | 0.800804 | 1.213475e-48 | -8.615850e-47 |
| Msa0542560 | Msa1194190 | 0.801685 | 8.014285e-49 | -8.615850e-47 |
| Msa0861570 | Msa1194190 | 0.807620 | 4.623407e-50 | -8.615850e-47 |
| Msa0974950 | Msa1194190 | 0.813714 | 2.225927e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1194190 | MtrunA17_Chr4g0059801 | 98.214 | 616 | 10 | 1 | 1 | 616 | 1 | 615 | 0.0 | 1266 |
| Msa1194190 | MtrunA17_Chr5g0415331 | 67.598 | 537 | 155 | 3 | 99 | 616 | 107 | 643 | 0.0 | 775 |
| Msa1194190 | MtrunA17_Chr8g0363761 | 61.672 | 574 | 199 | 2 | 60 | 616 | 83 | 652 | 0.0 | 758 |
| Msa1194190 | MtrunA17_Chr2g0285521 | 57.356 | 537 | 209 | 4 | 99 | 616 | 154 | 689 | 0.0 | 666 |
| Msa1194190 | MtrunA17_Chr4g0068981 | 37.660 | 547 | 292 | 16 | 91 | 613 | 120 | 641 | 3.37e-109 | 342 |
| Msa1194190 | MtrunA17_Chr5g0417441 | 35.915 | 568 | 338 | 15 | 59 | 616 | 86 | 637 | 6.75e-108 | 338 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1194190 | AT1G74800.1 | 61.573 | 661 | 192 | 10 | 13 | 616 | 17 | 672 | 0.0 | 825 |
| Msa1194190 | AT5G62620.1 | 60.902 | 665 | 199 | 8 | 13 | 616 | 17 | 681 | 0.0 | 825 |
| Msa1194190 | AT1G27120.1 | 61.214 | 593 | 193 | 9 | 55 | 616 | 87 | 673 | 0.0 | 738 |
| Msa1194190 | AT1G27120.2 | 61.214 | 593 | 193 | 9 | 55 | 616 | 56 | 642 | 0.0 | 738 |
| Msa1194190 | AT5G62620.2 | 58.893 | 596 | 185 | 7 | 13 | 548 | 17 | 612 | 0.0 | 710 |
| Msa1194190 | AT4G21060.1 | 56.111 | 540 | 214 | 5 | 99 | 616 | 203 | 741 | 0.0 | 649 |
| Msa1194190 | AT4G21060.2 | 56.111 | 540 | 214 | 5 | 99 | 616 | 146 | 684 | 0.0 | 648 |
| Msa1194190 | AT1G26810.2 | 37.547 | 530 | 313 | 11 | 95 | 613 | 118 | 640 | 3.57e-108 | 340 |
| Msa1194190 | AT1G26810.1 | 37.547 | 530 | 313 | 11 | 95 | 613 | 118 | 640 | 3.57e-108 | 340 |
| Msa1194190 | AT3G06440.1 | 35.529 | 501 | 277 | 12 | 128 | 613 | 149 | 618 | 7.00e-95 | 304 |
| Msa1194190 | AT3G06440.2 | 35.593 | 472 | 244 | 11 | 156 | 613 | 164 | 589 | 2.15e-89 | 289 |
| Msa1194190 | AT1G53290.1 | 24.887 | 221 | 150 | 6 | 371 | 582 | 89 | 302 | 9.65e-13 | 70.5 |
| Msa1194190 | AT2G26100.1 | 23.913 | 230 | 141 | 6 | 371 | 582 | 113 | 326 | 2.65e-11 | 66.2 |
| Msa1194190 | AT2G26100.2 | 23.913 | 230 | 141 | 6 | 371 | 582 | 113 | 326 | 3.64e-11 | 65.5 |
Find 189 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAGCTTGTTCTCATTAAA+TGG | 0.078939 | 8_1:+41243202 | None:intergenic |
| CATTAACACCTTGTTATATT+TGG | 0.147019 | 8_1:-41241308 | Msa1194190:three_prime_UTR |
| AACCTTTGCGCTATGGTAAA+TGG | 0.171593 | 8_1:-41242280 | Msa1194190:CDS |
| CCTCGATCGGTTTCGGTTAC+CGG | 0.222788 | 8_1:-41244975 | Msa1194190:CDS |
| ACAGTGGCTATATGTGAATA+TGG | 0.238270 | 8_1:-41242534 | Msa1194190:CDS |
| GATTCAATGGGTGCTTATAT+TGG | 0.242485 | 8_1:-41242323 | Msa1194190:CDS |
| TTATTTGCAGTTGTTTAAAA+TGG | 0.255152 | 8_1:-41241681 | Msa1194190:intron |
| GACCGATAATTGATACTCTT+TGG | 0.260484 | 8_1:+41245094 | None:intergenic |
| GTTTCGGAGCGGTTTGAATT+GGG | 0.283096 | 8_1:+41245021 | None:intergenic |
| CCGGGTCGTTTCTCGGGTTT+CGG | 0.287682 | 8_1:+41245005 | None:intergenic |
| TAAAATTACGGTCGCAAATA+AGG | 0.289928 | 8_1:+41245481 | None:intergenic |
| TTCTAGTTGGTCATTTGTTT+CGG | 0.296914 | 8_1:-41241268 | Msa1194190:three_prime_UTR |
| ATCATGTGCCTCACATTAAA+AGG | 0.302297 | 8_1:+41241174 | None:intergenic |
| CAAACATACTGCTAAGATTA+AGG | 0.308313 | 8_1:-41241208 | Msa1194190:three_prime_UTR |
| GGTTTCGGAGCGGTTTGAAT+TGG | 0.314577 | 8_1:+41245020 | None:intergenic |
| AATTTGAGAAGCATAAATTA+AGG | 0.315817 | 8_1:-41241812 | Msa1194190:CDS |
| TAAAATGGAAGATGTGAGTA+TGG | 0.343186 | 8_1:-41241666 | Msa1194190:CDS |
| ATTCCATGTGGGTTGACGTT+AGG | 0.343305 | 8_1:-41244918 | Msa1194190:CDS |
| AGCTTAAGATTCTGCCAGTT+TGG | 0.344065 | 8_1:-41241593 | Msa1194190:CDS |
| CTCCAATCCCCTTTCAACCT+TGG | 0.344309 | 8_1:+41244774 | None:intergenic |
| ATTCAATGGGTGCTTATATT+GGG | 0.352784 | 8_1:-41242322 | Msa1194190:CDS |
| CTCATCTTTCCCTTTCTAGT+TGG | 0.358518 | 8_1:-41241281 | Msa1194190:three_prime_UTR |
| TGCCAGTTTGGCTGTATAGA+AGG | 0.360397 | 8_1:-41241581 | Msa1194190:CDS |
| CAAGGCAGATGATGTGCCTT+TGG | 0.360820 | 8_1:-41241532 | Msa1194190:CDS |
| TTGAGCTTAATTCTTGCTAT+AGG | 0.365590 | 8_1:-41244737 | Msa1194190:CDS |
| CATGACCCGGGTCGTTTCTC+GGG | 0.367277 | 8_1:+41244999 | None:intergenic |
| CAGAGGAGTTTGTATCAAAA+TGG | 0.367638 | 8_1:-41243279 | Msa1194190:CDS |
| TAGTGGTGGGGCACGCCATC+TGG | 0.368521 | 8_1:+41242888 | None:intergenic |
| GTCATGTCCTCGATCGGTTT+CGG | 0.371149 | 8_1:-41244982 | Msa1194190:CDS |
| TCAAAGATGGAAAACGCGTT+TGG | 0.379937 | 8_1:-41245073 | Msa1194190:CDS |
| ACATGACCCGGGTCGTTTCT+CGG | 0.384566 | 8_1:+41244998 | None:intergenic |
| ATATAAGCACCCATTGAATC+TGG | 0.387504 | 8_1:+41242326 | None:intergenic |
| TCGTATATTTGTAAATATAT+CGG | 0.389094 | 8_1:-41241385 | Msa1194190:three_prime_UTR |
| TTCCAAAGAGTATCAATTAT+CGG | 0.394580 | 8_1:-41245096 | Msa1194190:CDS |
| ACCTTTGCGCTATGGTAAAT+GGG | 0.399165 | 8_1:-41242279 | Msa1194190:CDS |
| GGCTCGTTTCTTTGTAGCAC+TGG | 0.401231 | 8_1:-41242746 | Msa1194190:intron |
| TTCCATGTGGGTTGACGTTA+GGG | 0.406982 | 8_1:-41244917 | Msa1194190:CDS |
| TTTGTTCTTACTGTTAGTGC+TGG | 0.408116 | 8_1:-41243181 | Msa1194190:CDS |
| TACTGTTAGTGCTGGATTGG+AGG | 0.410336 | 8_1:-41243173 | Msa1194190:CDS |
| CAGTGGCTATATGTGAATAT+GGG | 0.410795 | 8_1:-41242533 | Msa1194190:CDS |
| AACCTTCTATACAGCCAAAC+TGG | 0.415858 | 8_1:+41241579 | None:intergenic |
| ATAGCTTGTTCTCATTAAAT+GGG | 0.417104 | 8_1:+41243203 | None:intergenic |
| TGAAGTGTGAGAAGTGGATT+GGG | 0.417442 | 8_1:-41243318 | Msa1194190:CDS |
| TATGGTGGATAATCCTCTTC+AGG | 0.422986 | 8_1:+41241891 | None:intergenic |
| GGGTCGGAGTTTGCGGCGAA+TGG | 0.424804 | 8_1:-41244954 | Msa1194190:CDS |
| CAGCCATCCGCTCAGCGAAA+TGG | 0.425039 | 8_1:+41242818 | None:intergenic |
| TCTTACTGTTAGTGCTGGAT+TGG | 0.429595 | 8_1:-41243176 | Msa1194190:CDS |
| CAAGAATTAAGCTCAATAAC+AGG | 0.430167 | 8_1:+41244744 | None:intergenic |
| TCAGCTTTGTGATGAGTACT+AGG | 0.439433 | 8_1:+41245161 | None:intergenic |
| AAGGCAGATGATGTGCCTTT+GGG | 0.441955 | 8_1:-41241531 | Msa1194190:CDS |
| TCTCGGGCTGATCAAGATAC+TGG | 0.442369 | 8_1:-41244675 | Msa1194190:intron |
| ATTTGAGAAGCATAAATTAA+GGG | 0.444140 | 8_1:-41241811 | Msa1194190:intron |
| TACCATAGCGCAAAGGTTTG+TGG | 0.445602 | 8_1:+41242285 | None:intergenic |
| GATTATCCACCATATGCTAA+TGG | 0.446168 | 8_1:-41241882 | Msa1194190:CDS |
| TGCTGCTGTGGAGAAATATT+AGG | 0.446378 | 8_1:+41242925 | None:intergenic |
| ACATCATCTGCCTTGGAGAT+TGG | 0.446915 | 8_1:+41241540 | None:intergenic |
| GGTTACCGGGTCGGAGTTTG+CGG | 0.448831 | 8_1:-41244961 | Msa1194190:CDS |
| CATTTCAATCCAAGGTTGAA+AGG | 0.451774 | 8_1:-41244783 | Msa1194190:CDS |
| AAAGCTGATTCGATTCTCTC+TGG | 0.453769 | 8_1:-41245146 | Msa1194190:CDS |
| AAGGAAGGTTCCAGATTCAA+TGG | 0.456683 | 8_1:-41242336 | Msa1194190:CDS |
| GGTTGGGAAACCGTTGAGTT+CGG | 0.457799 | 8_1:-41244880 | Msa1194190:CDS |
| CTCGATCGGTTTCGGTTACC+GGG | 0.458045 | 8_1:-41244974 | Msa1194190:CDS |
| GACGTTAGGGTCGCATATAA+CGG | 0.460702 | 8_1:-41244904 | Msa1194190:CDS |
| ATCCAAGGTTGAAAGGGGAT+TGG | 0.464715 | 8_1:-41244776 | Msa1194190:CDS |
| CGAAATGGTTTCCAGCTGAT+AGG | 0.465640 | 8_1:+41242833 | None:intergenic |
| GTGAAGTGTGAGAAGTGGAT+TGG | 0.470984 | 8_1:-41243319 | Msa1194190:CDS |
| TATTGTTATAGTGCCTTACA+TGG | 0.471405 | 8_1:-41242583 | Msa1194190:CDS |
| AACAATTCGACACCAAAGTT+AGG | 0.473926 | 8_1:+41242865 | None:intergenic |
| AAACAAATGACCAACTAGAA+AGG | 0.481706 | 8_1:+41241271 | None:intergenic |
| CCACCATATGCTAATGGACC+GGG | 0.482311 | 8_1:-41241876 | Msa1194190:CDS |
| ATTTCAATCCAAGGTTGAAA+GGG | 0.482323 | 8_1:-41244782 | Msa1194190:CDS |
| GCATTCTAGTAGTAAAATTA+CGG | 0.483534 | 8_1:+41245469 | None:intergenic |
| TATCAATTATCGGTCAAAGA+TGG | 0.490425 | 8_1:-41245086 | Msa1194190:CDS |
| TTTACTCTTGAGGATGCTAC+TGG | 0.491271 | 8_1:-41243012 | Msa1194190:CDS |
| AACAAATGACCAACTAGAAA+GGG | 0.492567 | 8_1:+41241272 | None:intergenic |
| CACCACAAACCTTTGCGCTA+TGG | 0.494561 | 8_1:-41242287 | Msa1194190:CDS |
| ACTGTTAGTGCTGGATTGGA+GGG | 0.495887 | 8_1:-41243172 | Msa1194190:CDS |
| CAAAGGCACATCATCTGCCT+TGG | 0.496875 | 8_1:+41241533 | None:intergenic |
| TCATTTGTTTCGGCTAGGAT+TGG | 0.499792 | 8_1:-41241258 | Msa1194190:three_prime_UTR |
| AATTAATGCAGAGTTGAAGA+AGG | 0.502321 | 8_1:-41242625 | Msa1194190:CDS |
| TGTGTTTGAGTCGGCGGTGT+TGG | 0.504980 | 8_1:+41245444 | None:intergenic |
| GGTCGGAGTTTGCGGCGAAT+GGG | 0.506308 | 8_1:-41244953 | Msa1194190:CDS |
| TTTCGGAGCGGTTTGAATTG+GGG | 0.506438 | 8_1:+41245022 | None:intergenic |
| TTCATCGGCATCCTATCAGC+TGG | 0.509286 | 8_1:-41242844 | Msa1194190:CDS |
| ATCGGTTTCGGTTACCGGGT+CGG | 0.509889 | 8_1:-41244970 | Msa1194190:CDS |
| CTTCTTTGAGATGTGATGGT+TGG | 0.510984 | 8_1:-41244701 | Msa1194190:CDS |
| GGAGTTGCAGGGTTTGAAAA+CGG | 0.511284 | 8_1:-41244835 | Msa1194190:CDS |
| AGGTCGTACTTATCCATGTA+AGG | 0.513016 | 8_1:+41242570 | None:intergenic |
| GATGATTATGAGAATTTGAA+AGG | 0.514415 | 8_1:+41245295 | None:intergenic |
| TGCGGCGAATGGGAGTTTGA+TGG | 0.514844 | 8_1:-41244943 | Msa1194190:CDS |
| ATGCTGTTATAGACGAAGTA+AGG | 0.515605 | 8_1:-41242355 | Msa1194190:CDS |
| GCTACTGGACTCACTGTACA+TGG | 0.516052 | 8_1:-41242997 | Msa1194190:CDS |
| TTGTTCTCATTAAATGGGAA+TGG | 0.517600 | 8_1:+41243208 | None:intergenic |
| TACCCCGGTCCATTAGCATA+TGG | 0.518101 | 8_1:+41241873 | None:intergenic |
| GATGTGATGGTTGGAAATCT+CGG | 0.522915 | 8_1:-41244692 | Msa1194190:CDS |
| GGTACTTCTTTGAGATGTGA+TGG | 0.523543 | 8_1:-41244705 | Msa1194190:CDS |
| TCATTACTCACAGTGCGATA+AGG | 0.524860 | 8_1:+41243109 | None:intergenic |
| GGTCGCATATAACGGTGGTT+GGG | 0.525176 | 8_1:-41244896 | Msa1194190:CDS |
| GAAATATTAGGATGTGTTGA+AGG | 0.525213 | 8_1:+41242937 | None:intergenic |
| GGGTCGCATATAACGGTGGT+TGG | 0.529564 | 8_1:-41244897 | Msa1194190:CDS |
| GGAGCAGGGCTTTACTCTTG+AGG | 0.531178 | 8_1:-41243022 | Msa1194190:intron |
| GGATCGTTGTTTACAAAGAG+AGG | 0.532450 | 8_1:+41245316 | None:intergenic |
| AGGAGGCAGCAAATATAGAA+TGG | 0.533959 | 8_1:+41242962 | None:intergenic |
| CTAGGATTGGTAAGATGAAA+GGG | 0.535269 | 8_1:-41241245 | Msa1194190:three_prime_UTR |
| GTTGGTCATTTGTTTCGGCT+AGG | 0.539836 | 8_1:-41241263 | Msa1194190:three_prime_UTR |
| CAGGGTTTGAAAACGGTGGA+AGG | 0.540423 | 8_1:-41244828 | Msa1194190:CDS |
| GCCCCACCACTACCTAACTT+TGG | 0.541625 | 8_1:-41242877 | Msa1194190:CDS |
| GCTAGGATTGGTAAGATGAA+AGG | 0.542570 | 8_1:-41241246 | Msa1194190:three_prime_UTR |
| GGATTGAAATGCAAAATCCT+TGG | 0.542726 | 8_1:+41244795 | None:intergenic |
| GGGAAACCGTTGAGTTCGGA+AGG | 0.544210 | 8_1:-41244876 | Msa1194190:CDS |
| TATCTCATGTTGCAGCATTG+AGG | 0.545162 | 8_1:+41241485 | None:intergenic |
| ATTAGGATGTGTTGAAGGCA+AGG | 0.547117 | 8_1:+41242942 | None:intergenic |
| TCCACCATATGCTAATGGAC+CGG | 0.548296 | 8_1:-41241877 | Msa1194190:CDS |
| AGGAAGGTTTGTGTTTGAGT+CGG | 0.548555 | 8_1:+41245435 | None:intergenic |
| AAACCATTTCGCTGAGCGGA+TGG | 0.548725 | 8_1:-41242821 | Msa1194190:CDS |
| GGTTGAAAGGGGATTGGAGT+GGG | 0.549692 | 8_1:-41244770 | Msa1194190:CDS |
| TTTGGTGTCGAATTGTTCAT+CGG | 0.555807 | 8_1:-41242859 | Msa1194190:CDS |
| AGGAAGGTTCCAGATTCAAT+GGG | 0.558346 | 8_1:-41242335 | Msa1194190:CDS |
| TCCGCTGCAATTTATCCCAA+AGG | 0.559578 | 8_1:+41241516 | None:intergenic |
| ATGTGATGGTTGGAAATCTC+GGG | 0.560828 | 8_1:-41244691 | Msa1194190:CDS |
| TTCTTGCTATAGGATGCAGT+GGG | 0.562531 | 8_1:-41244727 | Msa1194190:CDS |
| CACCAAAGTTAGGTAGTGGT+GGG | 0.562634 | 8_1:+41242875 | None:intergenic |
| GGCAGGTGAAGTGTGAGAAG+TGG | 0.571744 | 8_1:-41243324 | Msa1194190:CDS |
| AACCGATCGAGGACATGACC+CGG | 0.573142 | 8_1:+41244986 | None:intergenic |
| GTTTGAAACAGTTGATGGGC+AGG | 0.575587 | 8_1:-41243341 | Msa1194190:intron |
| ACCCGGGTCATGTCCTCGAT+CGG | 0.577534 | 8_1:-41244988 | Msa1194190:CDS |
| AAAATGGAAGATGTGAGTAT+GGG | 0.579322 | 8_1:-41241665 | Msa1194190:CDS |
| AAGATGTGAGTATGGGAATG+TGG | 0.582220 | 8_1:-41241658 | Msa1194190:CDS |
| GAAGTGTGAGAAGTGGATTG+GGG | 0.583197 | 8_1:-41243317 | Msa1194190:CDS |
| AGATGTGAGTATGGGAATGT+GGG | 0.583910 | 8_1:-41241657 | Msa1194190:CDS |
| TCGACACCAAAGTTAGGTAG+TGG | 0.587215 | 8_1:+41242871 | None:intergenic |
| TGATGACACATTTGTTAGAG+TGG | 0.588128 | 8_1:-41242378 | Msa1194190:CDS |
| CCACCGTACCTCGTTCTGAA+AGG | 0.588871 | 8_1:-41245217 | Msa1194190:CDS |
| ACACCAAAGTTAGGTAGTGG+TGG | 0.589737 | 8_1:+41242874 | None:intergenic |
| AAGGTTTGTGTTTGAGTCGG+CGG | 0.589765 | 8_1:+41245438 | None:intergenic |
| TGGTGGTTGAATAGATTCGT+AGG | 0.590566 | 8_1:-41243259 | Msa1194190:CDS |
| ATTCTTGCTATAGGATGCAG+TGG | 0.592709 | 8_1:-41244728 | Msa1194190:CDS |
| GTTTGATGGTGATTCCATGT+GGG | 0.594871 | 8_1:-41244929 | Msa1194190:CDS |
| TTTCAATCCAAGGTTGAAAG+GGG | 0.600721 | 8_1:-41244781 | Msa1194190:CDS |
| CCCGGTCCATTAGCATATGG+TGG | 0.600858 | 8_1:+41241876 | None:intergenic |
| TATCAAATCTTCAGAAGTGG+TGG | 0.605393 | 8_1:-41242767 | Msa1194190:CDS |
| GCCCATTTACCATAGCGCAA+AGG | 0.605559 | 8_1:+41242278 | None:intergenic |
| TGAAATGCAAAATCCTTGGT+GGG | 0.609975 | 8_1:+41244799 | None:intergenic |
| AGTGGCTATATGTGAATATG+GGG | 0.610270 | 8_1:-41242532 | Msa1194190:intron |
| TTGAAATGCAAAATCCTTGG+TGG | 0.614352 | 8_1:+41244798 | None:intergenic |
| ATTGGTAAGATGAAAGGGAG+TGG | 0.616395 | 8_1:-41241240 | Msa1194190:three_prime_UTR |
| GACCCTAACGTCAACCCACA+TGG | 0.619717 | 8_1:+41244915 | None:intergenic |
| TCTGCGGCGTACATCATGAA+AGG | 0.623296 | 8_1:-41242404 | Msa1194190:CDS |
| TTGTGTTTGAAACAGTTGAT+GGG | 0.623496 | 8_1:-41243345 | Msa1194190:intron |
| TGTTATAGACGAAGTAAGGA+AGG | 0.624304 | 8_1:-41242351 | Msa1194190:CDS |
| TGCAACATGAGATAACAAAG+TGG | 0.624611 | 8_1:-41241476 | Msa1194190:exon |
| TCTTATCAAATCTTCAGAAG+TGG | 0.625517 | 8_1:-41242770 | Msa1194190:CDS |
| GGTTGAATAGATTCGTAGGT+CGG | 0.628907 | 8_1:-41243255 | Msa1194190:CDS |
| AGGAGTTTGTATCAAAATGG+TGG | 0.631044 | 8_1:-41243276 | Msa1194190:CDS |
| CCTTTCAGAACGAGGTACGG+TGG | 0.636507 | 8_1:+41245217 | None:intergenic |
| AGTTTGATGGTGATTCCATG+TGG | 0.637507 | 8_1:-41244930 | Msa1194190:CDS |
| ATACTCTTTGGAATCGAATG+CGG | 0.638680 | 8_1:+41245106 | None:intergenic |
| GCAACATGAGATAACAAAGT+GGG | 0.642839 | 8_1:-41241475 | Msa1194190:exon |
| GTGCCTTTCAGAACGAGGTA+CGG | 0.643332 | 8_1:+41245214 | None:intergenic |
| CAGCTCATTACCAATCTCCA+AGG | 0.644488 | 8_1:-41241550 | Msa1194190:CDS |
| GGGAGATGATAGGCAAGCAG+AGG | 0.645689 | 8_1:-41243296 | Msa1194190:CDS |
| CTGGAAACCATTTCGCTGAG+CGG | 0.649419 | 8_1:-41242825 | Msa1194190:CDS |
| GTAGGTTAATAGAGTATCTG+CGG | 0.650192 | 8_1:-41242420 | Msa1194190:intron |
| AGAACGTGCCTTTCAGAACG+AGG | 0.650228 | 8_1:+41245209 | None:intergenic |
| GGTAAGATGAAAGGGAGTGG+TGG | 0.650892 | 8_1:-41241237 | Msa1194190:three_prime_UTR |
| GAAAATTCAAGATGCTGCTG+TGG | 0.653389 | 8_1:+41242913 | None:intergenic |
| GCCTTTGGGATAAATTGCAG+CGG | 0.654028 | 8_1:-41241517 | Msa1194190:CDS |
| ATTCGCCGCAAACTCCGACC+CGG | 0.655320 | 8_1:+41244956 | None:intergenic |
| ACCAAAGTTAGGTAGTGGTG+GGG | 0.656151 | 8_1:+41242876 | None:intergenic |
| ACCGATCGAGGACATGACCC+GGG | 0.657365 | 8_1:+41244987 | None:intergenic |
| AGGTTGAAAGGGGATTGGAG+TGG | 0.659965 | 8_1:-41244771 | Msa1194190:CDS |
| TCGTTTCTCGGGTTTCGGAG+CGG | 0.661719 | 8_1:+41245010 | None:intergenic |
| GTTGCAGGGTTTGAAAACGG+TGG | 0.662672 | 8_1:-41244832 | Msa1194190:CDS |
| TAATGTTGATGGGAGGCATG+TGG | 0.664346 | 8_1:-41243140 | Msa1194190:CDS |
| AAGTGTGAGAAGTGGATTGG+GGG | 0.670079 | 8_1:-41243316 | Msa1194190:CDS |
| GGATGGCTGTGAGAAAGTCA+TGG | 0.678801 | 8_1:-41242804 | Msa1194190:CDS |
| TGGAAGGTGAAGACCCACCA+AGG | 0.679710 | 8_1:-41244812 | Msa1194190:CDS |
| CCGGTAACCGAAACCGATCG+AGG | 0.681265 | 8_1:+41244975 | None:intergenic |
| GGAAACCGTTGAGTTCGGAA+GGG | 0.685038 | 8_1:-41244875 | Msa1194190:CDS |
| TGAGATAACCAAATATAACA+AGG | 0.691015 | 8_1:+41241300 | None:intergenic |
| CACCATATGCTAATGGACCG+GGG | 0.698743 | 8_1:-41241875 | Msa1194190:CDS |
| CAACATGAGATAACAAAGTG+GGG | 0.701175 | 8_1:-41241474 | Msa1194190:exon |
| AGGATGTGTTGAAGGCAAGG+AGG | 0.709548 | 8_1:+41242945 | None:intergenic |
| GAGAGCGAGAACAACAACAA+AGG | 0.713379 | 8_1:-41245354 | Msa1194190:CDS |
| TCATAAGACAGAATATACCC+CGG | 0.731870 | 8_1:+41241858 | None:intergenic |
| CCTTGTTGTGTTGAAAACAG+TGG | 0.740634 | 8_1:-41242550 | Msa1194190:CDS |
| GTTAGGGTCGCATATAACGG+TGG | 0.757697 | 8_1:-41244901 | Msa1194190:CDS |
| TAAATGGGCTGTGACATACG+AGG | 0.770509 | 8_1:-41242264 | Msa1194190:intron |
| TCTTGCTATAGGATGCAGTG+GGG | 0.787501 | 8_1:-41244726 | Msa1194190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGATTATATATTATATTTTG+TGG | - | chr8_1:41243122-41243141 | Msa1194190:CDS | 10.0% |
| !! | AAAAATAAATAAATTTCAAG+AGG | - | chr8_1:41244206-41244225 | Msa1194190:intron | 10.0% |
| !! | TTCATCTATAAATTAAAAAA+TGG | + | chr8_1:41245244-41245263 | None:intergenic | 10.0% |
| !!! | TAAAGTATAGATTTTGATTT+TGG | - | chr8_1:41242076-41242095 | Msa1194190:intron | 15.0% |
| !!! | AAAGTATAGATTTTGATTTT+GGG | - | chr8_1:41242077-41242096 | Msa1194190:intron | 15.0% |
| !!! | TTGAGAATATTGATTTTTAT+TGG | - | chr8_1:41244746-41244765 | Msa1194190:CDS | 15.0% |
| !! | TCGTATATTTGTAAATATAT+CGG | - | chr8_1:41245298-41245317 | Msa1194190:CDS | 15.0% |
| !!! | ATGAAATTTTTTTATCAGAA+GGG | + | chr8_1:41245358-41245377 | None:intergenic | 15.0% |
| !!! | AATGAAATTTTTTTATCAGA+AGG | + | chr8_1:41245359-41245378 | None:intergenic | 15.0% |
| !!! | TATGATATTTTAAGAGTCAA+AGG | + | chr8_1:41241271-41241290 | None:intergenic | 20.0% |
| !!! | ATTGGAAATTTTACATAAGT+CGG | - | chr8_1:41242183-41242202 | Msa1194190:intron | 20.0% |
| !!! | GTAATTTGTAACATTGTTTA+TGG | - | chr8_1:41242278-41242297 | Msa1194190:CDS | 20.0% |
| !!! | TATATTTTGTGGATAAAAAG+TGG | - | chr8_1:41243133-41243152 | Msa1194190:CDS | 20.0% |
| !! | ACAAAAGCAAAATTAAGAAA+TGG | + | chr8_1:41243637-41243656 | None:intergenic | 20.0% |
| !!! | CTTAATTTTGCTTTTGTAAT+TGG | - | chr8_1:41243640-41243659 | Msa1194190:intron | 20.0% |
| !! | AATAAAGCATGAAATCAAAA+GGG | + | chr8_1:41243984-41244003 | None:intergenic | 20.0% |
| !! | TAATAAAGCATGAAATCAAA+AGG | + | chr8_1:41243985-41244004 | None:intergenic | 20.0% |
| !!! | CATGCTTTATTATTTTCTTA+CGG | - | chr8_1:41243993-41244012 | Msa1194190:intron | 20.0% |
| !!! | ATGCTTTATTATTTTCTTAC+GGG | - | chr8_1:41243994-41244013 | Msa1194190:intron | 20.0% |
| !!! | TCTGCATTAATTTCTATTTT+CGG | + | chr8_1:41244050-41244069 | None:intergenic | 20.0% |
| !!! | AATTTGAGAAGCATAAATTA+AGG | - | chr8_1:41244871-41244890 | Msa1194190:CDS | 20.0% |
| !!! | ATTTGAGAAGCATAAATTAA+GGG | - | chr8_1:41244872-41244891 | Msa1194190:CDS | 20.0% |
| !! | TTATTTGCAGTTGTTTAAAA+TGG | - | chr8_1:41245002-41245021 | Msa1194190:CDS | 20.0% |
| !!! | AAATTTTTGCACTGTATAAA+TGG | - | chr8_1:41245332-41245351 | Msa1194190:CDS | 20.0% |
| !!! | ATAAGGAACTTGTTTTAAAG+TGG | + | chr8_1:41241188-41241207 | None:intergenic | 25.0% |
| ! | GCATTCTAGTAGTAAAATTA+CGG | + | chr8_1:41241217-41241236 | None:intergenic | 25.0% |
| !!! | ATATTTTAAGAGTCAAAGGA+AGG | + | chr8_1:41241267-41241286 | None:intergenic | 25.0% |
| ! | GATGATTATGAGAATTTGAA+AGG | + | chr8_1:41241391-41241410 | None:intergenic | 25.0% |
| !!! | TGGTTTTGTTGAAAACAAAA+GGG | + | chr8_1:41241449-41241468 | None:intergenic | 25.0% |
| !!! | TTCCAAAGAGTATCAATTAT+CGG | - | chr8_1:41241587-41241606 | Msa1194190:CDS | 25.0% |
| !!! | AGGGAAAAATCACTTTTTTT+TGG | - | chr8_1:41241827-41241846 | Msa1194190:CDS | 25.0% |
| !!! | TTTAAGTTGAATATGCATGT+TGG | - | chr8_1:41242109-41242128 | Msa1194190:intron | 25.0% |
| ! | AAGACATAGAACAACTATTA+AGG | - | chr8_1:41242223-41242242 | Msa1194190:intron | 25.0% |
| ! | TTGTTTATGGTAGAACATTA+TGG | - | chr8_1:41242291-41242310 | Msa1194190:CDS | 25.0% |
| !! | TTGTTCATTTAGAGTTACTT+TGG | - | chr8_1:41242533-41242552 | Msa1194190:CDS | 25.0% |
| ! | TGTTAATGTCAGTTATTATG+TGG | - | chr8_1:41242636-41242655 | Msa1194190:CDS | 25.0% |
| ! | GTTAATGTCAGTTATTATGT+GGG | - | chr8_1:41242637-41242656 | Msa1194190:CDS | 25.0% |
| ! | TTCAATACTTCAAATTCATG+CGG | - | chr8_1:41242735-41242754 | Msa1194190:intron | 25.0% |
| ! | CAAGTTCAATATAAAACTAC+CGG | + | chr8_1:41242853-41242872 | None:intergenic | 25.0% |
| !!! | AAGTTTCTAGTTGTAGATTT+GGG | - | chr8_1:41242993-41243012 | Msa1194190:CDS | 25.0% |
| ! | TCAAAGATTCAAAGATAAAC+TGG | + | chr8_1:41243269-41243288 | None:intergenic | 25.0% |
| !!! | CAATCAACTGTTACTTTTTT+CGG | + | chr8_1:41243454-41243473 | None:intergenic | 25.0% |
| !!! | ATAGCTTGTTCTCATTAAAT+GGG | + | chr8_1:41243483-41243502 | None:intergenic | 25.0% |
| !!! | AATAGCTTGTTCTCATTAAA+TGG | + | chr8_1:41243484-41243503 | None:intergenic | 25.0% |
| !!! | GCTATCATTTTAATGTTGAT+GGG | - | chr8_1:41243533-41243552 | Msa1194190:intron | 25.0% |
| ! | AATGGTACAAATCAAAATTC+TGG | + | chr8_1:41243619-41243638 | None:intergenic | 25.0% |
| !!! | TGCTTTATTATTTTCTTACG+GGG | - | chr8_1:41243995-41244014 | Msa1194190:intron | 25.0% |
| !! | CTGCATTAATTTCTATTTTC+GGG | + | chr8_1:41244049-41244068 | None:intergenic | 25.0% |
| !!! | TTTTTTTCGTTGTTAAAGAG+CGG | - | chr8_1:41244463-41244482 | Msa1194190:intron | 25.0% |
| ! | TTATAACCAGCAATAAGTAA+TGG | + | chr8_1:41244717-41244736 | None:intergenic | 25.0% |
| ! | TTAAACAACTGCAAATAAGA+GGG | + | chr8_1:41245000-41245019 | None:intergenic | 25.0% |
| ! | TTTAAACAACTGCAAATAAG+AGG | + | chr8_1:41245001-41245020 | None:intergenic | 25.0% |
| !! | CATTAACACCTTGTTATATT+TGG | - | chr8_1:41245375-41245394 | Msa1194190:exon | 25.0% |
| ! | TGAGATAACCAAATATAACA+AGG | + | chr8_1:41245386-41245405 | None:intergenic | 25.0% |
| TAAAATTACGGTCGCAAATA+AGG | + | chr8_1:41241205-41241224 | None:intergenic | 30.0% | |
| !!! | GTGGTTTTGTTGAAAACAAA+AGG | + | chr8_1:41241450-41241469 | None:intergenic | 30.0% |
| TATCAATTATCGGTCAAAGA+TGG | - | chr8_1:41241597-41241616 | Msa1194190:CDS | 30.0% | |
| ATTTCAATCCAAGGTTGAAA+GGG | - | chr8_1:41241901-41241920 | Msa1194190:intron | 30.0% | |
| CAAGAATTAAGCTCAATAAC+AGG | + | chr8_1:41241942-41241961 | None:intergenic | 30.0% | |
| ! | TTGAGCTTAATTCTTGCTAT+AGG | - | chr8_1:41241946-41241965 | Msa1194190:intron | 30.0% |
| AGATTTAGAGATCAATGAGT+TGG | - | chr8_1:41242247-41242266 | Msa1194190:intron | 30.0% | |
| CTTGCTTTGTAAAATTGACT+TGG | + | chr8_1:41242446-41242465 | None:intergenic | 30.0% | |
| ! | TGATGGTAATGTATACATGT+TGG | - | chr8_1:41242769-41242788 | Msa1194190:CDS | 30.0% |
| ! | AACTAAGTTGACTGTGTAAA+GGG | - | chr8_1:41242923-41242942 | Msa1194190:CDS | 30.0% |
| !! | GAAGTTTCTAGTTGTAGATT+TGG | - | chr8_1:41242992-41243011 | Msa1194190:CDS | 30.0% |
| !! | AGTTTCTAGTTGTAGATTTG+GGG | - | chr8_1:41242994-41243013 | Msa1194190:CDS | 30.0% |
| !!! | TTTTGATCTGTTTCTAACCA+TGG | + | chr8_1:41243049-41243068 | None:intergenic | 30.0% |
| ATGATTCTACTGTTACTATG+TGG | - | chr8_1:41243198-41243217 | Msa1194190:CDS | 30.0% | |
| TGATTCTACTGTTACTATGT+GGG | - | chr8_1:41243199-41243218 | Msa1194190:CDS | 30.0% | |
| ! | TTGTGTTTGAAACAGTTGAT+GGG | - | chr8_1:41243338-41243357 | Msa1194190:intron | 30.0% |
| CGAAAAAAGTAACAGTTGAT+TGG | - | chr8_1:41243452-41243471 | Msa1194190:intron | 30.0% | |
| TTGTTCTCATTAAATGGGAA+TGG | + | chr8_1:41243478-41243497 | None:intergenic | 30.0% | |
| !! | GGCTATCATTTTAATGTTGA+TGG | - | chr8_1:41243532-41243551 | Msa1194190:intron | 30.0% |
| !! | ATCATTTTAATGTTGATGGG+AGG | - | chr8_1:41243536-41243555 | Msa1194190:intron | 30.0% |
| GAAATATTAGGATGTGTTGA+AGG | + | chr8_1:41243749-41243768 | None:intergenic | 30.0% | |
| ! | ATCTTGAATTTTCAACCAGA+TGG | - | chr8_1:41243780-41243799 | Msa1194190:intron | 30.0% |
| TCTTATCAAATCTTCAGAAG+TGG | - | chr8_1:41243913-41243932 | Msa1194190:intron | 30.0% | |
| AATTAATGCAGAGTTGAAGA+AGG | - | chr8_1:41244058-41244077 | Msa1194190:intron | 30.0% | |
| !!! | AAGAAGGAAGCAGAATTTTT+TGG | - | chr8_1:41244074-41244093 | Msa1194190:intron | 30.0% |
| TATTGTTATAGTGCCTTACA+TGG | - | chr8_1:41244100-41244119 | Msa1194190:intron | 30.0% | |
| TAAATTTCAAGAGGAATCAG+AGG | - | chr8_1:41244215-41244234 | Msa1194190:intron | 30.0% | |
| ATTCAATGGGTGCTTATATT+GGG | - | chr8_1:41244361-41244380 | Msa1194190:intron | 30.0% | |
| AACGAAAAAAACATTGCATC+AGG | + | chr8_1:41244454-41244473 | None:intergenic | 30.0% | |
| !!! | TTTTTTCGTTGTTAAAGAGC+GGG | - | chr8_1:41244464-41244483 | Msa1194190:intron | 30.0% |
| GAGAAAAACTTAAATACAGC+TGG | + | chr8_1:41244695-41244714 | None:intergenic | 30.0% | |
| ! | TTTTCTCCATTACTTATTGC+TGG | - | chr8_1:41244708-41244727 | Msa1194190:CDS | 30.0% |
| TAAACAACTGCAAATAAGAG+GGG | + | chr8_1:41244999-41245018 | None:intergenic | 30.0% | |
| TAAAATGGAAGATGTGAGTA+TGG | - | chr8_1:41245017-41245036 | Msa1194190:CDS | 30.0% | |
| AAAATGGAAGATGTGAGTAT+GGG | - | chr8_1:41245018-41245037 | Msa1194190:CDS | 30.0% | |
| AACAAATGACCAACTAGAAA+GGG | + | chr8_1:41245414-41245433 | None:intergenic | 30.0% | |
| AAACAAATGACCAACTAGAA+AGG | + | chr8_1:41245415-41245434 | None:intergenic | 30.0% | |
| ! | TTCTAGTTGGTCATTTGTTT+CGG | - | chr8_1:41245415-41245434 | Msa1194190:five_prime_UTR | 30.0% |
| CAAACATACTGCTAAGATTA+AGG | - | chr8_1:41245475-41245494 | Msa1194190:five_prime_UTR | 30.0% | |
| !! | ATACTCTTTGGAATCGAATG+CGG | + | chr8_1:41241580-41241599 | None:intergenic | 35.0% |
| GACCGATAATTGATACTCTT+TGG | + | chr8_1:41241592-41241611 | None:intergenic | 35.0% | |
| !!! | TCACTTTTTTTTGGAGTTGC+AGG | - | chr8_1:41241836-41241855 | Msa1194190:CDS | 35.0% |
| !!! | CACTTTTTTTTGGAGTTGCA+GGG | - | chr8_1:41241837-41241856 | Msa1194190:CDS | 35.0% |
| TGAAATGCAAAATCCTTGGT+GGG | + | chr8_1:41241887-41241906 | None:intergenic | 35.0% | |
| TTGAAATGCAAAATCCTTGG+TGG | + | chr8_1:41241888-41241907 | None:intergenic | 35.0% | |
| GGATTGAAATGCAAAATCCT+TGG | + | chr8_1:41241891-41241910 | None:intergenic | 35.0% | |
| ! | GGATTTTGCATTTCAATCCA+AGG | - | chr8_1:41241892-41241911 | Msa1194190:CDS | 35.0% |
| CATTTCAATCCAAGGTTGAA+AGG | - | chr8_1:41241900-41241919 | Msa1194190:CDS | 35.0% | |
| TTTCAATCCAAGGTTGAAAG+GGG | - | chr8_1:41241902-41241921 | Msa1194190:intron | 35.0% | |
| ! | TGAATATGCATGTTGGTTAG+TGG | - | chr8_1:41242116-41242135 | Msa1194190:intron | 35.0% |
| TGACTTGAAGTGATTTGAGT+TGG | - | chr8_1:41242160-41242179 | Msa1194190:intron | 35.0% | |
| !! | TGAAGTGATTTGAGTTGGAT+TGG | - | chr8_1:41242165-41242184 | Msa1194190:intron | 35.0% |
| TATGAAATTGTGCCATAGTC+CGG | - | chr8_1:41242685-41242704 | Msa1194190:intron | 35.0% | |
| TGCATACATCAAAGATGAAC+CGG | + | chr8_1:41242707-41242726 | None:intergenic | 35.0% | |
| CAGTCAACTTAGTTGTAACT+GGG | + | chr8_1:41242917-41242936 | None:intergenic | 35.0% | |
| ACAGTCAACTTAGTTGTAAC+TGG | + | chr8_1:41242918-41242937 | None:intergenic | 35.0% | |
| ! | CAACTAAGTTGACTGTGTAA+AGG | - | chr8_1:41242922-41242941 | Msa1194190:CDS | 35.0% |
| !! | GGTTCACCATGTGTTTTTAA+AGG | - | chr8_1:41243015-41243034 | Msa1194190:CDS | 35.0% |
| ! | GACTGACCTTTAAAAACACA+TGG | + | chr8_1:41243024-41243043 | None:intergenic | 35.0% |
| TTTGTCAAATGTTGACGAAG+TGG | - | chr8_1:41243099-41243118 | Msa1194190:intron | 35.0% | |
| ACTGTTACTATGTGGGAATA+TGG | - | chr8_1:41243206-41243225 | Msa1194190:CDS | 35.0% | |
| TTCAAAGATAAACTGGACCA+TGG | + | chr8_1:41243262-41243281 | None:intergenic | 35.0% | |
| CAAGCAACAACTCAATTTAG+AGG | + | chr8_1:41243321-41243340 | None:intergenic | 35.0% | |
| ! | CTTGTGTTTGAAACAGTTGA+TGG | - | chr8_1:41243337-41243356 | Msa1194190:intron | 35.0% |
| CAGAGGAGTTTGTATCAAAA+TGG | - | chr8_1:41243404-41243423 | Msa1194190:intron | 35.0% | |
| AGGAGTTTGTATCAAAATGG+TGG | - | chr8_1:41243407-41243426 | Msa1194190:intron | 35.0% | |
| TTTGTTCTTACTGTTAGTGC+TGG | - | chr8_1:41243502-41243521 | Msa1194190:intron | 35.0% | |
| !! | TTTGCTTTTGTAATTGGAGC+AGG | - | chr8_1:41243646-41243665 | Msa1194190:intron | 35.0% |
| !! | TTGCTTTTGTAATTGGAGCA+GGG | - | chr8_1:41243647-41243666 | Msa1194190:intron | 35.0% |
| AACAATTCGACACCAAAGTT+AGG | + | chr8_1:41243821-41243840 | None:intergenic | 35.0% | |
| !! | TTTGGTGTCGAATTGTTCAT+CGG | - | chr8_1:41243824-41243843 | Msa1194190:intron | 35.0% |
| TATCAAATCTTCAGAAGTGG+TGG | - | chr8_1:41243916-41243935 | Msa1194190:intron | 35.0% | |
| ACAGTGGCTATATGTGAATA+TGG | - | chr8_1:41244149-41244168 | Msa1194190:intron | 35.0% | |
| CAGTGGCTATATGTGAATAT+GGG | - | chr8_1:41244150-41244169 | Msa1194190:intron | 35.0% | |
| AGTGGCTATATGTGAATATG+GGG | - | chr8_1:41244151-41244170 | Msa1194190:intron | 35.0% | |
| AGATGTGCTACATTGTTTGT+AGG | - | chr8_1:41244245-41244264 | Msa1194190:intron | 35.0% | |
| ! | GTAGGTTAATAGAGTATCTG+CGG | - | chr8_1:41244263-41244282 | Msa1194190:intron | 35.0% |
| ! | TGATGACACATTTGTTAGAG+TGG | - | chr8_1:41244305-41244324 | Msa1194190:intron | 35.0% |
| ATGCTGTTATAGACGAAGTA+AGG | - | chr8_1:41244328-41244347 | Msa1194190:intron | 35.0% | |
| TGTTATAGACGAAGTAAGGA+AGG | - | chr8_1:41244332-41244351 | Msa1194190:intron | 35.0% | |
| ATATAAGCACCCATTGAATC+TGG | + | chr8_1:41244360-41244379 | None:intergenic | 35.0% | |
| GATTCAATGGGTGCTTATAT+TGG | - | chr8_1:41244360-41244379 | Msa1194190:intron | 35.0% | |
| AAACTTAGATGCAGTGTTGT+AGG | - | chr8_1:41244547-41244566 | Msa1194190:intron | 35.0% | |
| ! | TTTGATGATCCTCTCACAAA+GGG | + | chr8_1:41244660-41244679 | None:intergenic | 35.0% |
| !! | TTTTGATGATCCTCTCACAA+AGG | + | chr8_1:41244661-41244680 | None:intergenic | 35.0% |
| !!! | ATTGGTTGCCTTTTGTTTTC+AGG | - | chr8_1:41244764-41244783 | Msa1194190:CDS | 35.0% |
| GATTATCCACCATATGCTAA+TGG | - | chr8_1:41244801-41244820 | Msa1194190:CDS | 35.0% | |
| TCATAAGACAGAATATACCC+CGG | + | chr8_1:41244828-41244847 | None:intergenic | 35.0% | |
| ! | TGTTATTTGATCAAGTCTCC+AGG | - | chr8_1:41244933-41244952 | Msa1194190:CDS | 35.0% |
| TGCAACATGAGATAACAAAG+TGG | - | chr8_1:41245207-41245226 | Msa1194190:CDS | 35.0% | |
| GCAACATGAGATAACAAAGT+GGG | - | chr8_1:41245208-41245227 | Msa1194190:CDS | 35.0% | |
| CAACATGAGATAACAAAGTG+GGG | - | chr8_1:41245209-41245228 | Msa1194190:CDS | 35.0% | |
| ! | CTAGGATTGGTAAGATGAAA+GGG | - | chr8_1:41245438-41245457 | Msa1194190:five_prime_UTR | 35.0% |
| ! | TCAACACACCTTTTAATGTG+AGG | - | chr8_1:41245501-41245520 | Msa1194190:five_prime_UTR | 35.0% |
| AGGAAGGTTTGTGTTTGAGT+CGG | + | chr8_1:41241251-41241270 | None:intergenic | 40.0% | |
| GGATCGTTGTTTACAAAGAG+AGG | + | chr8_1:41241370-41241389 | None:intergenic | 40.0% | |
| ! | TCAGCTTTGTGATGAGTACT+AGG | + | chr8_1:41241525-41241544 | None:intergenic | 40.0% |
| !! | AAAGCTGATTCGATTCTCTC+TGG | - | chr8_1:41241537-41241556 | Msa1194190:CDS | 40.0% |
| TCAAAGATGGAAAACGCGTT+TGG | - | chr8_1:41241610-41241629 | Msa1194190:CDS | 40.0% | |
| !! | AGTTTGATGGTGATTCCATG+TGG | - | chr8_1:41241753-41241772 | Msa1194190:intron | 40.0% |
| !! | GTTTGATGGTGATTCCATGT+GGG | - | chr8_1:41241754-41241773 | Msa1194190:intron | 40.0% |
| ! | TTTTTCCCTTCCGAACTCAA+CGG | + | chr8_1:41241816-41241835 | None:intergenic | 40.0% |
| ! | ATTCTTGCTATAGGATGCAG+TGG | - | chr8_1:41241955-41241974 | Msa1194190:intron | 40.0% |
| ! | TTCTTGCTATAGGATGCAGT+GGG | - | chr8_1:41241956-41241975 | Msa1194190:intron | 40.0% |
| !! | GGTACTTCTTTGAGATGTGA+TGG | - | chr8_1:41241978-41241997 | Msa1194190:intron | 40.0% |
| !! | CTTCTTTGAGATGTGATGGT+TGG | - | chr8_1:41241982-41242001 | Msa1194190:intron | 40.0% |
| GATGTGATGGTTGGAAATCT+CGG | - | chr8_1:41241991-41242010 | Msa1194190:intron | 40.0% | |
| ATGTGATGGTTGGAAATCTC+GGG | - | chr8_1:41241992-41242011 | Msa1194190:intron | 40.0% | |
| AGTCGGATTACTAGAGACAT+AGG | - | chr8_1:41242200-41242219 | Msa1194190:intron | 40.0% | |
| ATCAAAGATGAACCGGACTA+TGG | + | chr8_1:41242700-41242719 | None:intergenic | 40.0% | |
| ATGCGGAATGAATAGAGTGA+TGG | - | chr8_1:41242752-41242771 | Msa1194190:CDS | 40.0% | |
| ! | ATCACCGCTTGAAAGTTTTC+CGG | - | chr8_1:41242831-41242850 | Msa1194190:CDS | 40.0% |
| ACTACCGGAAAACTTTCAAG+CGG | + | chr8_1:41242838-41242857 | None:intergenic | 40.0% | |
| !! | TTTTAAAGGTCAGTCGACCA+TGG | - | chr8_1:41243029-41243048 | Msa1194190:intron | 40.0% |
| CATGGCATAATTACACTACG+AGG | + | chr8_1:41243244-41243263 | None:intergenic | 40.0% | |
| CTCGTAGTGTAATTATGCCA+TGG | - | chr8_1:41243242-41243261 | Msa1194190:CDS | 40.0% | |
| ! | TGAAGTGTGAGAAGTGGATT+GGG | - | chr8_1:41243365-41243384 | Msa1194190:intron | 40.0% |
| TGGTGGTTGAATAGATTCGT+AGG | - | chr8_1:41243424-41243443 | Msa1194190:intron | 40.0% | |
| GGTTGAATAGATTCGTAGGT+CGG | - | chr8_1:41243428-41243447 | Msa1194190:intron | 40.0% | |
| ! | TCTTACTGTTAGTGCTGGAT+TGG | - | chr8_1:41243507-41243526 | Msa1194190:intron | 40.0% |
| TCATTACTCACAGTGCGATA+AGG | + | chr8_1:41243577-41243596 | None:intergenic | 40.0% | |
| TTTACTCTTGAGGATGCTAC+TGG | - | chr8_1:41243671-41243690 | Msa1194190:intron | 40.0% | |
| AGGAGGCAGCAAATATAGAA+TGG | + | chr8_1:41243724-41243743 | None:intergenic | 40.0% | |
| ATTAGGATGTGTTGAAGGCA+AGG | + | chr8_1:41243744-41243763 | None:intergenic | 40.0% | |
| TGCTGCTGTGGAGAAATATT+AGG | + | chr8_1:41243761-41243780 | None:intergenic | 40.0% | |
| GAAAATTCAAGATGCTGCTG+TGG | + | chr8_1:41243773-41243792 | None:intergenic | 40.0% | |
| AGGTCGTACTTATCCATGTA+AGG | + | chr8_1:41244116-41244135 | None:intergenic | 40.0% | |
| ! | CCACTGTTTTCAACACAACA+AGG | + | chr8_1:41244136-41244155 | None:intergenic | 40.0% |
| ! | CCTTGTTGTGTTGAAAACAG+TGG | - | chr8_1:41244133-41244152 | Msa1194190:intron | 40.0% |
| AAGGAAGGTTCCAGATTCAA+TGG | - | chr8_1:41244347-41244366 | Msa1194190:intron | 40.0% | |
| AGGAAGGTTCCAGATTCAAT+GGG | - | chr8_1:41244348-41244367 | Msa1194190:intron | 40.0% | |
| AACCTTTGCGCTATGGTAAA+TGG | - | chr8_1:41244403-41244422 | Msa1194190:intron | 40.0% | |
| ACCTTTGCGCTATGGTAAAT+GGG | - | chr8_1:41244404-41244423 | Msa1194190:intron | 40.0% | |
| ! | TTGATGATCCTCTCACAAAG+GGG | + | chr8_1:41244659-41244678 | None:intergenic | 40.0% |
| !!! | TTGCCTTTTGTTTTCAGGAG+TGG | - | chr8_1:41244769-41244788 | Msa1194190:CDS | 40.0% |
| !! | TATGGTGGATAATCCTCTTC+AGG | + | chr8_1:41244795-41244814 | None:intergenic | 40.0% |
| AAGATGTGAGTATGGGAATG+TGG | - | chr8_1:41245025-41245044 | Msa1194190:CDS | 40.0% | |
| AGATGTGAGTATGGGAATGT+GGG | - | chr8_1:41245026-41245045 | Msa1194190:CDS | 40.0% | |
| AGCTTAAGATTCTGCCAGTT+TGG | - | chr8_1:41245090-41245109 | Msa1194190:CDS | 40.0% | |
| AACCTTCTATACAGCCAAAC+TGG | + | chr8_1:41245107-41245126 | None:intergenic | 40.0% | |
| TATCTCATGTTGCAGCATTG+AGG | + | chr8_1:41245201-41245220 | None:intergenic | 40.0% | |
| ! | CTCATCTTTCCCTTTCTAGT+TGG | - | chr8_1:41245402-41245421 | Msa1194190:five_prime_UTR | 40.0% |
| TCATTTGTTTCGGCTAGGAT+TGG | - | chr8_1:41245425-41245444 | Msa1194190:five_prime_UTR | 40.0% | |
| ! | GCTAGGATTGGTAAGATGAA+AGG | - | chr8_1:41245437-41245456 | Msa1194190:five_prime_UTR | 40.0% |
| ATTGGTAAGATGAAAGGGAG+TGG | - | chr8_1:41245443-41245462 | Msa1194190:five_prime_UTR | 40.0% | |
| AAGGTTTGTGTTTGAGTCGG+CGG | + | chr8_1:41241248-41241267 | None:intergenic | 45.0% | |
| GAGAGCGAGAACAACAACAA+AGG | - | chr8_1:41241329-41241348 | Msa1194190:three_prime_UTR | 45.0% | |
| TTTCGGAGCGGTTTGAATTG+GGG | + | chr8_1:41241664-41241683 | None:intergenic | 45.0% | |
| GTTTCGGAGCGGTTTGAATT+GGG | + | chr8_1:41241665-41241684 | None:intergenic | 45.0% | |
| ! | ATTCCATGTGGGTTGACGTT+AGG | - | chr8_1:41241765-41241784 | Msa1194190:intron | 45.0% |
| ! | TTCCATGTGGGTTGACGTTA+GGG | - | chr8_1:41241766-41241785 | Msa1194190:intron | 45.0% |
| GACGTTAGGGTCGCATATAA+CGG | - | chr8_1:41241779-41241798 | Msa1194190:intron | 45.0% | |
| GGAGTTGCAGGGTTTGAAAA+CGG | - | chr8_1:41241848-41241867 | Msa1194190:CDS | 45.0% | |
| ATCCAAGGTTGAAAGGGGAT+TGG | - | chr8_1:41241907-41241926 | Msa1194190:intron | 45.0% | |
| ! | TCTTGCTATAGGATGCAGTG+GGG | - | chr8_1:41241957-41241976 | Msa1194190:intron | 45.0% |
| ! | AAGTCTTATCCCACTAAGCG+GGG | + | chr8_1:41242340-41242359 | None:intergenic | 45.0% |
| ! | CAAGTCTTATCCCACTAAGC+GGG | + | chr8_1:41242341-41242360 | None:intergenic | 45.0% |
| ! | CCAAGTCTTATCCCACTAAG+CGG | + | chr8_1:41242342-41242361 | None:intergenic | 45.0% |
| AAACGTGAGAAGCTACAGCT+TGG | + | chr8_1:41242515-41242534 | None:intergenic | 45.0% | |
| GAAACTTCCCTACCAATGCA+CGG | + | chr8_1:41242980-41242999 | None:intergenic | 45.0% | |
| !! | GTTTGAAACAGTTGATGGGC+AGG | - | chr8_1:41243342-41243361 | Msa1194190:intron | 45.0% |
| GTGAAGTGTGAGAAGTGGAT+TGG | - | chr8_1:41243364-41243383 | Msa1194190:intron | 45.0% | |
| !! | GAAGTGTGAGAAGTGGATTG+GGG | - | chr8_1:41243366-41243385 | Msa1194190:intron | 45.0% |
| !! | AAGTGTGAGAAGTGGATTGG+GGG | - | chr8_1:41243367-41243386 | Msa1194190:intron | 45.0% |
| ! | TACTGTTAGTGCTGGATTGG+AGG | - | chr8_1:41243510-41243529 | Msa1194190:intron | 45.0% |
| ! | ACTGTTAGTGCTGGATTGGA+GGG | - | chr8_1:41243511-41243530 | Msa1194190:intron | 45.0% |
| ! | TAATGTTGATGGGAGGCATG+TGG | - | chr8_1:41243543-41243562 | Msa1194190:intron | 45.0% |
| ! | ACCAAAGTTAGGTAGTGGTG+GGG | + | chr8_1:41243810-41243829 | None:intergenic | 45.0% |
| ! | CACCAAAGTTAGGTAGTGGT+GGG | + | chr8_1:41243811-41243830 | None:intergenic | 45.0% |
| ! | ACACCAAAGTTAGGTAGTGG+TGG | + | chr8_1:41243812-41243831 | None:intergenic | 45.0% |
| TCGACACCAAAGTTAGGTAG+TGG | + | chr8_1:41243815-41243834 | None:intergenic | 45.0% | |
| CGAAATGGTTTCCAGCTGAT+AGG | + | chr8_1:41243853-41243872 | None:intergenic | 45.0% | |
| TACCATAGCGCAAAGGTTTG+TGG | + | chr8_1:41244401-41244420 | None:intergenic | 45.0% | |
| !! | TAAATGGGCTGTGACATACG+AGG | - | chr8_1:41244419-41244438 | Msa1194190:intron | 45.0% |
| TTAAAGAGCGGGAGTTGTCT+TGG | - | chr8_1:41244475-41244494 | Msa1194190:intron | 45.0% | |
| CTTAGATGCAGTGTTGTAGG+TGG | - | chr8_1:41244550-41244569 | Msa1194190:intron | 45.0% | |
| AAAAACTGCCCCTTTGTGAG+AGG | - | chr8_1:41244648-41244667 | Msa1194190:intron | 45.0% | |
| AGGCCACTCCTGAAAACAAA+AGG | + | chr8_1:41244775-41244794 | None:intergenic | 45.0% | |
| ! | TCCACCATATGCTAATGGAC+CGG | - | chr8_1:41244806-41244825 | Msa1194190:CDS | 45.0% |
| TGCCAGTTTGGCTGTATAGA+AGG | - | chr8_1:41245102-41245121 | Msa1194190:CDS | 45.0% | |
| CAGCTCATTACCAATCTCCA+AGG | - | chr8_1:41245133-41245152 | Msa1194190:CDS | 45.0% | |
| ACATCATCTGCCTTGGAGAT+TGG | + | chr8_1:41245146-41245165 | None:intergenic | 45.0% | |
| AAGGCAGATGATGTGCCTTT+GGG | - | chr8_1:41245152-41245171 | Msa1194190:CDS | 45.0% | |
| !! | GCCTTTGGGATAAATTGCAG+CGG | - | chr8_1:41245166-41245185 | Msa1194190:CDS | 45.0% |
| TCCGCTGCAATTTATCCCAA+AGG | + | chr8_1:41245170-41245189 | None:intergenic | 45.0% | |
| GTTGGTCATTTGTTTCGGCT+AGG | - | chr8_1:41245420-41245439 | Msa1194190:five_prime_UTR | 45.0% | |
| GTGCCTTTCAGAACGAGGTA+CGG | + | chr8_1:41241472-41241491 | None:intergenic | 50.0% | |
| AGAACGTGCCTTTCAGAACG+AGG | + | chr8_1:41241477-41241496 | None:intergenic | 50.0% | |
| GGTTTCGGAGCGGTTTGAAT+TGG | + | chr8_1:41241666-41241685 | None:intergenic | 50.0% | |
| ! | GTCATGTCCTCGATCGGTTT+CGG | - | chr8_1:41241701-41241720 | Msa1194190:intron | 50.0% |
| GTTAGGGTCGCATATAACGG+TGG | - | chr8_1:41241782-41241801 | Msa1194190:intron | 50.0% | |
| GGTCGCATATAACGGTGGTT+GGG | - | chr8_1:41241787-41241806 | Msa1194190:intron | 50.0% | |
| GGTTGGGAAACCGTTGAGTT+CGG | - | chr8_1:41241803-41241822 | Msa1194190:intron | 50.0% | |
| GGAAACCGTTGAGTTCGGAA+GGG | - | chr8_1:41241808-41241827 | Msa1194190:intron | 50.0% | |
| GTTGCAGGGTTTGAAAACGG+TGG | - | chr8_1:41241851-41241870 | Msa1194190:CDS | 50.0% | |
| CAGGGTTTGAAAACGGTGGA+AGG | - | chr8_1:41241855-41241874 | Msa1194190:CDS | 50.0% | |
| CTCCAATCCCCTTTCAACCT+TGG | + | chr8_1:41241912-41241931 | None:intergenic | 50.0% | |
| AGGTTGAAAGGGGATTGGAG+TGG | - | chr8_1:41241912-41241931 | Msa1194190:intron | 50.0% | |
| GGTTGAAAGGGGATTGGAGT+GGG | - | chr8_1:41241913-41241932 | Msa1194190:intron | 50.0% | |
| TCTCGGGCTGATCAAGATAC+TGG | - | chr8_1:41242008-41242027 | Msa1194190:intron | 50.0% | |
| CCGCTTAGTGGGATAAGACT+TGG | - | chr8_1:41242339-41242358 | Msa1194190:CDS | 50.0% | |
| TGAGTGTATGCACCGTGCAT+TGG | - | chr8_1:41242965-41242984 | Msa1194190:CDS | 50.0% | |
| ! | TGTATGCACCGTGCATTGGT+AGG | - | chr8_1:41242969-41242988 | Msa1194190:CDS | 50.0% |
| ! | GTATGCACCGTGCATTGGTA+GGG | - | chr8_1:41242970-41242989 | Msa1194190:CDS | 50.0% |
| !! | AGTGGATTGGGGGAGATGAT+AGG | - | chr8_1:41243377-41243396 | Msa1194190:intron | 50.0% |
| GCTACTGGACTCACTGTACA+TGG | - | chr8_1:41243686-41243705 | Msa1194190:intron | 50.0% | |
| AGGATGTGTTGAAGGCAAGG+AGG | + | chr8_1:41243741-41243760 | None:intergenic | 50.0% | |
| TTCATCGGCATCCTATCAGC+TGG | - | chr8_1:41243839-41243858 | Msa1194190:intron | 50.0% | |
| CTGGAAACCATTTCGCTGAG+CGG | - | chr8_1:41243858-41243877 | Msa1194190:intron | 50.0% | |
| AAACCATTTCGCTGAGCGGA+TGG | - | chr8_1:41243862-41243881 | Msa1194190:intron | 50.0% | |
| GGATGGCTGTGAGAAAGTCA+TGG | - | chr8_1:41243879-41243898 | Msa1194190:intron | 50.0% | |
| GGCTCGTTTCTTTGTAGCAC+TGG | - | chr8_1:41243937-41243956 | Msa1194190:intron | 50.0% | |
| TCTGCGGCGTACATCATGAA+AGG | - | chr8_1:41244279-41244298 | Msa1194190:intron | 50.0% | |
| CACCACAAACCTTTGCGCTA+TGG | - | chr8_1:41244396-41244415 | Msa1194190:intron | 50.0% | |
| GCCCATTTACCATAGCGCAA+AGG | + | chr8_1:41244408-41244427 | None:intergenic | 50.0% | |
| !! | TTTTCAGGAGTGGCCTGAAG+AGG | - | chr8_1:41244779-41244798 | Msa1194190:CDS | 50.0% |
| ! | CCACCATATGCTAATGGACC+GGG | - | chr8_1:41244807-41244826 | Msa1194190:CDS | 50.0% |
| ! | CACCATATGCTAATGGACCG+GGG | - | chr8_1:41244808-41244827 | Msa1194190:CDS | 50.0% |
| TACCCCGGTCCATTAGCATA+TGG | + | chr8_1:41244813-41244832 | None:intergenic | 50.0% | |
| ! | CAAAGGCACATCATCTGCCT+TGG | + | chr8_1:41245153-41245172 | None:intergenic | 50.0% |
| CAAGGCAGATGATGTGCCTT+TGG | - | chr8_1:41245151-41245170 | Msa1194190:CDS | 50.0% | |
| GGTAAGATGAAAGGGAGTGG+TGG | - | chr8_1:41245446-41245465 | Msa1194190:five_prime_UTR | 50.0% | |
| TGTGTTTGAGTCGGCGGTGT+TGG | + | chr8_1:41241242-41241261 | None:intergenic | 55.0% | |
| CCTTTCAGAACGAGGTACGG+TGG | + | chr8_1:41241469-41241488 | None:intergenic | 55.0% | |
| ! | CCACCGTACCTCGTTCTGAA+AGG | - | chr8_1:41241466-41241485 | Msa1194190:exon | 55.0% |
| TCGTTTCTCGGGTTTCGGAG+CGG | + | chr8_1:41241676-41241695 | None:intergenic | 55.0% | |
| ACATGACCCGGGTCGTTTCT+CGG | + | chr8_1:41241688-41241707 | None:intergenic | 55.0% | |
| AACCGATCGAGGACATGACC+CGG | + | chr8_1:41241700-41241719 | None:intergenic | 55.0% | |
| ! | CCTCGATCGGTTTCGGTTAC+CGG | - | chr8_1:41241708-41241727 | Msa1194190:intron | 55.0% |
| ! | CTCGATCGGTTTCGGTTACC+GGG | - | chr8_1:41241709-41241728 | Msa1194190:intron | 55.0% |
| ! | ATCGGTTTCGGTTACCGGGT+CGG | - | chr8_1:41241713-41241732 | Msa1194190:intron | 55.0% |
| TGCGGCGAATGGGAGTTTGA+TGG | - | chr8_1:41241740-41241759 | Msa1194190:intron | 55.0% | |
| GACCCTAACGTCAACCCACA+TGG | + | chr8_1:41241771-41241790 | None:intergenic | 55.0% | |
| GGGTCGCATATAACGGTGGT+TGG | - | chr8_1:41241786-41241805 | Msa1194190:intron | 55.0% | |
| GGGAAACCGTTGAGTTCGGA+AGG | - | chr8_1:41241807-41241826 | Msa1194190:intron | 55.0% | |
| TGGAAGGTGAAGACCCACCA+AGG | - | chr8_1:41241871-41241890 | Msa1194190:CDS | 55.0% | |
| CTTATCCCACTAAGCGGGGT+CGG | + | chr8_1:41242336-41242355 | None:intergenic | 55.0% | |
| CGTGAGAAGCTACAGCTTGG+AGG | + | chr8_1:41242512-41242531 | None:intergenic | 55.0% | |
| GGCAGGTGAAGTGTGAGAAG+TGG | - | chr8_1:41243359-41243378 | Msa1194190:intron | 55.0% | |
| GGGAGATGATAGGCAAGCAG+AGG | - | chr8_1:41243387-41243406 | Msa1194190:intron | 55.0% | |
| GGAGCAGGGCTTTACTCTTG+AGG | - | chr8_1:41243661-41243680 | Msa1194190:intron | 55.0% | |
| GCCCCACCACTACCTAACTT+TGG | - | chr8_1:41243806-41243825 | Msa1194190:intron | 55.0% | |
| CCCGGTCCATTAGCATATGG+TGG | + | chr8_1:41244810-41244829 | None:intergenic | 55.0% | |
| ! | GAACGCACTATGCATCGACC+TGG | + | chr8_1:41244954-41244973 | None:intergenic | 55.0% |
| CCGGGTCGTTTCTCGGGTTT+CGG | + | chr8_1:41241681-41241700 | None:intergenic | 60.0% | |
| CCGAAACCCGAGAAACGACC+CGG | - | chr8_1:41241678-41241697 | Msa1194190:intron | 60.0% | |
| CGAAACCCGAGAAACGACCC+GGG | - | chr8_1:41241679-41241698 | Msa1194190:intron | 60.0% | |
| CATGACCCGGGTCGTTTCTC+GGG | + | chr8_1:41241687-41241706 | None:intergenic | 60.0% | |
| ACCCGGGTCATGTCCTCGAT+CGG | - | chr8_1:41241695-41241714 | Msa1194190:intron | 60.0% | |
| ACCGATCGAGGACATGACCC+GGG | + | chr8_1:41241699-41241718 | None:intergenic | 60.0% | |
| CCGGTAACCGAAACCGATCG+AGG | + | chr8_1:41241711-41241730 | None:intergenic | 60.0% | |
| GGTTACCGGGTCGGAGTTTG+CGG | - | chr8_1:41241722-41241741 | Msa1194190:intron | 60.0% | |
| ATTCGCCGCAAACTCCGACC+CGG | + | chr8_1:41241730-41241749 | None:intergenic | 60.0% | |
| GGTCGGAGTTTGCGGCGAAT+GGG | - | chr8_1:41241730-41241749 | Msa1194190:intron | 60.0% | |
| ATGTAGCCGACCCCGCTTAG+TGG | - | chr8_1:41242327-41242346 | Msa1194190:CDS | 60.0% | |
| TGTAGCCGACCCCGCTTAGT+GGG | - | chr8_1:41242328-41242347 | Msa1194190:CDS | 60.0% | |
| CAGCCATCCGCTCAGCGAAA+TGG | + | chr8_1:41243868-41243887 | None:intergenic | 60.0% | |
| GGGTCGGAGTTTGCGGCGAA+TGG | - | chr8_1:41241729-41241748 | Msa1194190:intron | 65.0% | |
| ! | TAGTGGTGGGGCACGCCATC+TGG | + | chr8_1:41243798-41243817 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 41241178 | 41245527 | 41241178 | ID=Msa1194190;Name=Msa1194190 |
| chr8_1 | mRNA | 41241178 | 41245527 | 41241178 | ID=Msa1194190-mRNA-1;Parent=Msa1194190;Name=Msa1194190-mRNA-1;_AED=0.03;_eAED=0.03;_QI=146|1|1|1|1|1|7|306|616 |
| chr8_1 | exon | 41241178 | 41241693 | 41241178 | ID=Msa1194190-mRNA-1:exon:13321;Parent=Msa1194190-mRNA-1 |
| chr8_1 | exon | 41241812 | 41241919 | 41241812 | ID=Msa1194190-mRNA-1:exon:13320;Parent=Msa1194190-mRNA-1 |
| chr8_1 | exon | 41242265 | 41242438 | 41242265 | ID=Msa1194190-mRNA-1:exon:13319;Parent=Msa1194190-mRNA-1 |
| chr8_1 | exon | 41242533 | 41242661 | 41242533 | ID=Msa1194190-mRNA-1:exon:13318;Parent=Msa1194190-mRNA-1 |
| chr8_1 | exon | 41242747 | 41243037 | 41242747 | ID=Msa1194190-mRNA-1:exon:13317;Parent=Msa1194190-mRNA-1 |
| chr8_1 | exon | 41243120 | 41243352 | 41243120 | ID=Msa1194190-mRNA-1:exon:13316;Parent=Msa1194190-mRNA-1 |
| chr8_1 | exon | 41244676 | 41245527 | 41244676 | ID=Msa1194190-mRNA-1:exon:13315;Parent=Msa1194190-mRNA-1 |
| chr8_1 | five_prime_UTR | 41245382 | 41245527 | 41245382 | ID=Msa1194190-mRNA-1:five_prime_utr;Parent=Msa1194190-mRNA-1 |
| chr8_1 | CDS | 41244676 | 41245381 | 41244676 | ID=Msa1194190-mRNA-1:cds;Parent=Msa1194190-mRNA-1 |
| chr8_1 | CDS | 41243120 | 41243352 | 41243120 | ID=Msa1194190-mRNA-1:cds;Parent=Msa1194190-mRNA-1 |
| chr8_1 | CDS | 41242747 | 41243037 | 41242747 | ID=Msa1194190-mRNA-1:cds;Parent=Msa1194190-mRNA-1 |
| chr8_1 | CDS | 41242533 | 41242661 | 41242533 | ID=Msa1194190-mRNA-1:cds;Parent=Msa1194190-mRNA-1 |
| chr8_1 | CDS | 41242265 | 41242438 | 41242265 | ID=Msa1194190-mRNA-1:cds;Parent=Msa1194190-mRNA-1 |
| chr8_1 | CDS | 41241812 | 41241919 | 41241812 | ID=Msa1194190-mRNA-1:cds;Parent=Msa1194190-mRNA-1 |
| chr8_1 | CDS | 41241484 | 41241693 | 41241484 | ID=Msa1194190-mRNA-1:cds;Parent=Msa1194190-mRNA-1 |
| chr8_1 | three_prime_UTR | 41241178 | 41241483 | 41241178 | ID=Msa1194190-mRNA-1:three_prime_utr;Parent=Msa1194190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
