AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1300180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1300180 MtrunA17_Chr4g0061651 96.170 470 18 0 1 470 1 470 0.0 936
Msa1300180 MtrunA17_Chr2g0308321 62.475 493 146 11 12 470 52 539 6.93e-173 496
Msa1300180 MtrunA17_Chr5g0420051 49.315 219 88 8 56 264 111 316 3.24e-51 179
Msa1300180 MtrunA17_Chr3g0132091 54.348 138 42 4 75 198 18 148 2.57e-38 142
Msa1300180 MtrunA17_Chr7g0224821 35.016 317 180 8 75 382 26 325 7.31e-37 139
Msa1300180 MtrunA17_Chr8g0386271 47.337 169 70 5 75 232 45 205 3.48e-36 137
Msa1300180 MtrunA17_Chr7g0231911 70.000 80 24 0 117 196 143 222 5.82e-34 130
Msa1300180 MtrunA17_Chr3g0122411 50.769 130 57 2 72 198 115 240 6.74e-34 132
Msa1300180 MtrunA17_Chr7g0258471 69.136 81 25 0 117 197 136 216 2.22e-33 130
Msa1300180 MtrunA17_Chr8g0334671 73.684 76 20 0 123 198 187 262 3.69e-33 128
Msa1300180 MtrunA17_Chr4g0046991 72.973 74 20 0 123 196 73 146 4.95e-33 122
Msa1300180 MtrunA17_Chr2g0282521 70.886 79 23 0 118 196 59 137 2.68e-32 120
Msa1300180 MtrunA17_Chr8g0360361 70.270 74 22 0 123 196 65 138 2.38e-31 119
Msa1300180 MtrunA17_Chr2g0302791 45.946 148 69 3 58 196 67 212 1.94e-30 125
Msa1300180 MtrunA17_Chr7g0270541 69.737 76 23 0 121 196 143 218 2.14e-30 125
Msa1300180 MtrunA17_Chr1g0162871 62.366 93 31 1 110 198 87 179 1.22e-29 122
Msa1300180 MtrunA17_Chr1g0194121 69.737 76 23 0 121 196 145 220 1.47e-29 122
Msa1300180 MtrunA17_Chr8g0377421 57.471 87 35 1 122 206 131 217 1.53e-27 112
Msa1300180 MtrunA17_Chr8g0377401 61.644 73 28 0 123 195 162 234 4.47e-25 103
Msa1300180 MtrunA17_Chr2g0286661 52.703 74 35 0 123 196 103 176 8.53e-21 95.9
Msa1300180 MtrunA17_Chr1g0175031 68.085 47 15 0 123 169 74 120 1.95e-15 73.2
Msa1300180 MtrunA17_Chr2g0317041 65.957 47 16 0 123 169 99 145 1.99e-15 73.6
Msa1300180 MtrunA17_Chr8g0377431 55.556 54 24 0 123 176 151 204 9.17e-15 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1300180 AT1G69170.1 64.286 126 32 3 75 197 83 198 9.59e-45 161
Msa1300180 AT5G50570.1 46.067 178 84 4 123 288 101 278 2.70e-37 140
Msa1300180 AT5G50570.2 46.067 178 84 4 123 288 101 278 2.70e-37 140
Msa1300180 AT5G50670.1 46.067 178 84 4 123 288 101 278 2.70e-37 140
Msa1300180 AT5G50670.2 46.067 178 84 4 123 288 101 278 2.70e-37 140
Msa1300180 AT1G27370.6 68.966 87 27 0 123 209 176 262 2.64e-36 137
Msa1300180 AT1G27370.1 68.966 87 27 0 123 209 176 262 7.10e-36 137
Msa1300180 AT1G27370.5 68.966 87 27 0 123 209 176 262 7.10e-36 137
Msa1300180 AT1G27370.3 68.966 87 27 0 123 209 176 262 7.10e-36 137
Msa1300180 AT1G27370.2 68.966 87 27 0 123 209 176 262 7.10e-36 137
Msa1300180 AT1G27370.4 68.966 87 27 0 123 209 176 262 7.10e-36 137
Msa1300180 AT1G27370.7 68.966 87 27 0 123 209 176 262 7.10e-36 137
Msa1300180 AT1G27360.2 46.429 168 65 4 53 209 108 261 4.67e-35 135
Msa1300180 AT1G27360.1 46.429 168 65 4 53 209 108 261 4.67e-35 135
Msa1300180 AT1G27360.3 46.429 168 65 4 53 209 108 261 4.67e-35 135
Msa1300180 AT1G27360.4 46.429 168 65 4 53 209 108 261 4.67e-35 135
Msa1300180 AT5G43270.3 46.199 171 68 6 48 209 94 249 7.61e-34 132
Msa1300180 AT5G43270.1 46.199 171 68 6 48 209 94 249 7.61e-34 132
Msa1300180 AT5G43270.2 46.199 171 68 6 48 209 94 249 7.61e-34 132
Msa1300180 AT2G33810.1 67.089 79 26 0 118 196 49 127 7.14e-33 121
Msa1300180 AT3G57920.1 70.588 85 25 0 114 198 50 134 1.47e-32 127
Msa1300180 AT2G42200.1 75.000 76 19 0 123 198 74 149 1.92e-32 127
Msa1300180 AT1G02065.1 72.727 77 21 0 120 196 185 261 2.27e-32 126
Msa1300180 AT2G47070.1 73.684 76 20 0 121 196 104 179 3.08e-31 128
Msa1300180 AT1G53160.2 51.667 120 48 3 123 232 54 173 4.64e-31 118
Msa1300180 AT1G53160.1 51.667 120 48 3 123 232 54 173 4.64e-31 118
Msa1300180 AT3G60030.1 72.973 74 20 0 123 196 127 200 4.66e-31 127
Msa1300180 AT1G20980.1 62.000 100 35 1 110 206 104 203 9.55e-31 126
Msa1300180 AT1G76580.2 72.368 76 21 0 123 198 114 189 3.44e-30 124
Msa1300180 AT1G76580.3 72.368 76 21 0 123 198 114 189 3.86e-30 124
Msa1300180 AT1G53160.3 62.069 87 31 1 123 207 54 140 4.25e-30 115
Msa1300180 AT1G76580.1 72.368 76 21 0 123 198 114 189 6.65e-30 124
Msa1300180 AT3G15270.1 63.636 77 28 0 123 199 63 139 1.14e-28 112
Msa1300180 AT5G18830.2 54.023 87 39 1 112 197 127 213 2.33e-22 100
Msa1300180 AT5G18830.3 54.023 87 39 1 112 197 127 213 2.56e-22 100
Msa1300180 AT5G18830.1 54.023 87 39 1 112 197 127 213 2.64e-22 100
Msa1300180 AT2G47070.2 76.000 50 12 0 147 196 1 50 5.67e-18 87.4
Msa1300180 AT1G02065.2 64.706 51 18 0 120 170 185 235 2.59e-16 79.0

Find 135 sgRNAs with CRISPR-Local

Find 514 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGGATTACTTAAAGTAATT+TGG 0.127072 8_3:-61626132 Msa1300180:exon
AGAATACAATTTGTTATTAT+TGG 0.132948 8_3:+61629189 None:intergenic
ACTGCATATTGTCAAGTTTA+TGG 0.148069 8_3:-61628354 Msa1300180:CDS
AGGTCTTCCAAAGTGGTTTC+TGG 0.202370 8_3:-61626841 Msa1300180:CDS
GGCGTTCACTCTACAAATTC+TGG 0.217076 8_3:-61627419 Msa1300180:CDS
TGTATCAAAATATGGTATTC+AGG 0.248584 8_3:-61625216 Msa1300180:three_prime_UTR
CTGCTGGTGGCTTGGTTCCC+TGG 0.251209 8_3:+61626882 None:intergenic
GGACTGGCTTGAAGTGTTAT+TGG 0.259748 8_3:+61626511 None:intergenic
CCTAAGTTGTTTAAGATAAC+TGG 0.265112 8_3:+61625508 None:intergenic
AGTTATATTTCTGAAGAAAA+AGG 0.280021 8_3:-61628699 Msa1300180:CDS
CACAAACTTTATGCCTCTTA+TGG 0.303462 8_3:+61628298 None:intergenic
CAAAATAGGTGCTGCTCCTT+TGG 0.306496 8_3:+61628428 None:intergenic
ATGGAACAATGAAGTAAAAT+AGG 0.312918 8_3:+61629115 None:intergenic
TTATACTATGTATCAAAATA+TGG 0.319473 8_3:-61625224 Msa1300180:three_prime_UTR
CCAAATTACTTTAAGTAATC+CGG 0.320661 8_3:+61626132 None:intergenic
GGGAGACTGTTTCAGCCATT+TGG 0.327396 8_3:-61627398 Msa1300180:CDS
TGATATAGCCTAACATGTTT+AGG 0.334165 8_3:+61625334 None:intergenic
TATGGCCTGCAAGTCGTTTA+CGG 0.342741 8_3:+61627465 None:intergenic
TCAGATGATTTCAATTTCAT+TGG 0.348900 8_3:-61628633 Msa1300180:CDS
CCAAGCATTCAAGGATTATC+AGG 0.351371 8_3:-61626575 Msa1300180:CDS
CTAGTTTGTCCGCGCTGATT+CGG 0.353422 8_3:-61625388 Msa1300180:three_prime_UTR
GCTTCATGTTCTGCTTTCAT+AGG 0.354620 8_3:+61626815 None:intergenic
TCCATCTGTAGGATTTAATT+CGG 0.357577 8_3:+61626379 None:intergenic
TTATTGTCTGGTACCAATAT+AGG 0.364521 8_3:+61626344 None:intergenic
CATTGCAAGCTTCTACTTCC+CGG 0.371060 8_3:+61625482 None:intergenic
CTAGGTTGCTCACGCTGATT+CGG 0.377521 8_3:-61625430 Msa1300180:three_prime_UTR
TTGATGAATAGATAGGAAAA+TGG 0.382421 8_3:+61629241 None:intergenic
GTTCCAAGCAAGAAACTTGA+TGG 0.403736 8_3:-61628606 Msa1300180:CDS
TGAGTGCACTCTCACTCTCT+TGG 0.404810 8_3:+61628380 None:intergenic
CATACCGCACCAAGCATTCA+AGG 0.405157 8_3:-61626584 Msa1300180:CDS
CAAGGATCTTAGTTCTTGTA+AGG 0.406648 8_3:-61628325 Msa1300180:CDS
TGATATCGTGAACTTTGAAA+TGG 0.410198 8_3:-61626321 Msa1300180:CDS
GACTCACAAGAAGACAAAAT+AGG 0.410388 8_3:+61628414 None:intergenic
TCTTGCAGATATCAGATTCC+AGG 0.416127 8_3:-61626900 Msa1300180:intron
AATTCCCTTTGATAACCCTT+TGG 0.423487 8_3:-61626483 Msa1300180:CDS
CAGAACATGAAGCTGGCTTT+AGG 0.424799 8_3:-61626805 Msa1300180:CDS
TGTTGCATGCAATGGAATCT+TGG 0.426426 8_3:-61628722 Msa1300180:exon
GAGTGCACTCTCACTCTCTT+GGG 0.430597 8_3:+61628381 None:intergenic
TTACCATCAAGTTTCTTGCT+TGG 0.431934 8_3:+61628603 None:intergenic
AGTTGCCGTAAACGACTTGC+AGG 0.435658 8_3:-61627470 Msa1300180:CDS
CCTGATAATCCTTGAATGCT+TGG 0.438418 8_3:+61626575 None:intergenic
GCTGACCTCCTAAACATGTT+AGG 0.440928 8_3:-61625342 Msa1300180:three_prime_UTR
AAGTCATCTCAGTCCTATAT+TGG 0.441537 8_3:-61626357 Msa1300180:CDS
ATTCCATTCACAATGACTAT+AGG 0.443748 8_3:+61628258 None:intergenic
AAAGCCATTGATGAATAGAT+AGG 0.447792 8_3:+61629234 None:intergenic
CAAAGGGAATTTCCAAGGAC+TGG 0.449402 8_3:+61626495 None:intergenic
TTGATTCTTCTTGCACTCTC+CGG 0.459359 8_3:-61626151 Msa1300180:CDS
AAGTAGTGAGCAGAAGAGAA+TGG 0.462046 8_3:+61625456 None:intergenic
TCTCTCATTGATTTGAAGCT+AGG 0.463051 8_3:-61628495 Msa1300180:CDS
CACAATGACTATAGGAGTCT+TGG 0.465991 8_3:+61628266 None:intergenic
GTATCAAAATATGGTATTCA+GGG 0.466386 8_3:-61625215 Msa1300180:three_prime_UTR
TAACACTTCAAGCCAGTCCT+TGG 0.468157 8_3:-61626507 Msa1300180:CDS
TATTGGAGTGAAGAAGAAGA+AGG 0.468505 8_3:+61629206 None:intergenic
TCTTCTGTGCCTGTCACCAA+TGG 0.476821 8_3:-61626776 Msa1300180:CDS
GCATCATAGACAATCATTGC+AGG 0.480777 8_3:-61626186 Msa1300180:CDS
GCGTTCACTCTACAAATTCT+GGG 0.481125 8_3:-61627418 Msa1300180:CDS
TTCACGATATCATTATTGTC+TGG 0.484373 8_3:+61626332 None:intergenic
CATTCACAAAATCTGAATCA+TGG 0.487792 8_3:+61626285 None:intergenic
CTAGGAAGATTTGATGATCA+TGG 0.493709 8_3:-61628477 Msa1300180:CDS
GCCATTGGCTACACCTCCTT+AGG 0.499701 8_3:-61626629 Msa1300180:CDS
ATTGAAGTCTTCGCTTCCTA+AGG 0.501723 8_3:+61626613 None:intergenic
ATTGATTCTGTTGCATGCAA+TGG 0.502897 8_3:-61628730 Msa1300180:exon
TATATATTATTACCACCAAA+TGG 0.502996 8_3:+61627383 None:intergenic
CCAGTTATCTTAAACAACTT+AGG 0.503002 8_3:-61625508 Msa1300180:three_prime_UTR
AAAAGATGCTGCTGGTGGCT+TGG 0.511710 8_3:+61626874 None:intergenic
TACTTAAAGTAATTTGGAAG+AGG 0.512591 8_3:-61626126 Msa1300180:intron
TAGACATGGCTATGGCTGCT+TGG 0.512721 8_3:+61626455 None:intergenic
TTCTGCTCACTACTTTAACT+AGG 0.513424 8_3:-61625448 Msa1300180:three_prime_UTR
TGTGGTGGAATCCAATGGTT+GGG 0.513935 8_3:-61628520 Msa1300180:CDS
ACTCCTATAGTCATTGTGAA+TGG 0.516933 8_3:-61628261 Msa1300180:CDS
TTGCTGTCTGAGTTTGATGA+TGG 0.518570 8_3:-61627500 Msa1300180:CDS
TCCGAATTAAATCCTACAGA+TGG 0.523648 8_3:-61626380 Msa1300180:CDS
AATGAGAGAATCCCAACCAT+TGG 0.523865 8_3:+61628509 None:intergenic
AAACCACTTTGGAAGACCTC+TGG 0.529651 8_3:+61626845 None:intergenic
AGCCATTATGCTCATGCCAT+TGG 0.530681 8_3:-61626644 Msa1300180:CDS
AGCCAATGGCATGAGCATAA+TGG 0.532501 8_3:+61626642 None:intergenic
TAGGTCTCCAGAAACCACTT+TGG 0.532795 8_3:+61626834 None:intergenic
AAAATGATGATGAAGGTGTC+AGG 0.533491 8_3:+61629140 None:intergenic
CTTGTAAGGACTACCATAAG+AGG 0.534199 8_3:-61628311 Msa1300180:CDS
TTTCAAGCTTTCAAATTCTG+TGG 0.537070 8_3:-61628538 Msa1300180:CDS
AAAAGTAAACAAGTTTATGT+TGG 0.539447 8_3:+61628961 None:intergenic
TTGCATCATCTTCACAAGAA+AGG 0.541164 8_3:+61626252 None:intergenic
TTATGCTGTAGACATGGCTA+TGG 0.541912 8_3:+61626447 None:intergenic
AATGTTGCCACATCCACTAC+AGG 0.543311 8_3:-61626689 Msa1300180:CDS
ATAACCAAAGGGTTATCAAA+GGG 0.544827 8_3:+61626479 None:intergenic
CAAGCTTTCAAATTCTGTGG+TGG 0.545205 8_3:-61628535 Msa1300180:CDS
GTTATCAAAGGGAATTTCCA+AGG 0.547080 8_3:+61626490 None:intergenic
AGACTGTTTCAGCCATTTGG+TGG 0.551343 8_3:-61627395 Msa1300180:intron
AGAAAAGCACGTGATGAGAA+TGG 0.553756 8_3:+61629092 None:intergenic
ATGCTCTTTCAATGGTTCTG+AGG 0.554764 8_3:-61628887 Msa1300180:five_prime_UTR
TCTTAAACAACTTAGGCCAC+CGG 0.556964 8_3:-61625501 Msa1300180:three_prime_UTR
GGATAGAGAAAAGATGCTGC+TGG 0.557359 8_3:+61626866 None:intergenic
GGAAAACTGATAGTTGATGA+AGG 0.560107 8_3:+61629267 None:intergenic
AATAACCAAAGGGTTATCAA+AGG 0.561243 8_3:+61626478 None:intergenic
TGGCTGCTTGGAATAACCAA+AGG 0.562021 8_3:+61626467 None:intergenic
AAGCACGTGATGAGAATGGA+TGG 0.562313 8_3:+61629096 None:intergenic
CTGTGGTGGAATCCAATGGT+TGG 0.564108 8_3:-61628521 Msa1300180:CDS
ATGAAAGCAGAACATGAAGC+TGG 0.566946 8_3:-61626812 Msa1300180:CDS
GGCTGCTTGGAATAACCAAA+GGG 0.567623 8_3:+61626468 None:intergenic
GAAGTCTTCGCTTCCTAAGG+AGG 0.569996 8_3:+61626616 None:intergenic
AACATGTTAGGCTATATCAA+TGG 0.570957 8_3:-61625330 Msa1300180:three_prime_UTR
CTTAAACAACTTAGGCCACC+GGG 0.571074 8_3:-61625500 Msa1300180:three_prime_UTR
GTGAACTTTGAAATGGAAGA+CGG 0.572384 8_3:-61626314 Msa1300180:CDS
CTTACTGCCTGTAGTGGATG+TGG 0.574967 8_3:+61626682 None:intergenic
TGAACTTTGAAATGGAAGAC+GGG 0.575100 8_3:-61626313 Msa1300180:CDS
TATAGCCTAACATGTTTAGG+AGG 0.578756 8_3:+61625337 None:intergenic
ACTGAACTTACTGCCTGTAG+TGG 0.586429 8_3:+61626676 None:intergenic
CTGAGATGACTTCCATCTGT+AGG 0.587562 8_3:+61626368 None:intergenic
TCTTGATTGAAGATGTCCAT+TGG 0.588804 8_3:+61626760 None:intergenic
TTAAGATAACTGGCTTACAA+AGG 0.590955 8_3:+61625518 None:intergenic
TCTATCAGACACTCGGCTTG+AGG 0.591247 8_3:+61626409 None:intergenic
TGAAGATGTCCATTGGTGAC+AGG 0.591626 8_3:+61626767 None:intergenic
CTTGCAGATATCAGATTCCA+GGG 0.591867 8_3:-61626899 Msa1300180:intron
TGCAACAGAATCAATGAGCA+AGG 0.595556 8_3:+61628738 None:intergenic
TGCACTCTCACTCTCTTGGG+AGG 0.598164 8_3:+61628384 None:intergenic
TCCTAAGGAGGTGTAGCCAA+TGG 0.598734 8_3:+61626628 None:intergenic
TATCCAGAGGTCTTCCAAAG+TGG 0.601895 8_3:-61626848 Msa1300180:CDS
ATAGGTGAAAATGATGATGA+AGG 0.608548 8_3:+61629133 None:intergenic
CAAAAGACTTCAGTTTCCGT+AGG 0.610691 8_3:+61628788 None:intergenic
TTGTGAATGGAATTGAGCAG+AGG 0.621516 8_3:-61628248 Msa1300180:CDS
AATTCTGTGGTGGAATCCAA+TGG 0.627306 8_3:-61628525 Msa1300180:CDS
TGGCAATGCTTCAATTGATG+CGG 0.627501 8_3:-61628457 Msa1300180:CDS
TAAGAGGCATAAAGTTTGTG+AGG 0.628037 8_3:-61628295 Msa1300180:CDS
CGACAGTTGTAGTAAATCGA+TGG 0.628450 8_3:+61626229 None:intergenic
GAATAGATAGGAAAATGGAA+AGG 0.638829 8_3:+61629246 None:intergenic
GTGATCTTATGCTGTAGACA+TGG 0.639068 8_3:+61626441 None:intergenic
ATAAAAGTCTATCAGACACT+CGG 0.644463 8_3:+61626402 None:intergenic
TCAAGTTTATGGATGTAACA+AGG 0.656151 8_3:-61628343 Msa1300180:CDS
TTTGTAGAGTGAACGCCTTG+TGG 0.665425 8_3:+61627425 None:intergenic
TGCAAGCTTCTACTTCCCGG+TGG 0.672667 8_3:+61625485 None:intergenic
TAGAGAAAAGATGCTGCTGG+TGG 0.692709 8_3:+61626869 None:intergenic
TTACAGTGTCCTAAAACACG+AGG 0.715655 8_3:+61629309 None:intergenic
TAATCCTTGAATGCTTGGTG+CGG 0.726498 8_3:+61626580 None:intergenic
GAGCGTCGAAGAAAACCACA+AGG 0.736819 8_3:-61627440 Msa1300180:CDS
GTTCATAATCCGAATCAGCG+CGG 0.765768 8_3:+61625379 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGAATTAATTTAGTAAAA+TGG + chr8_3:61626521-61626540 None:intergenic 10.0%
!! AATGAATTAATTTAGTAAAA+TGG + chr8_3:61626521-61626540 None:intergenic 10.0%
!!! AGAATACAATTTGTTATTAT+TGG + chr8_3:61625336-61625355 None:intergenic 15.0%
!!! AGCTTTTTACTATTATATTA+TGG + chr8_3:61625671-61625690 None:intergenic 15.0%
!!! TGTAAAATTGATTCTATATT+TGG - chr8_3:61626362-61626381 Msa1300180:CDS 15.0%
!! GGATACAATTATATAAAAAA+GGG + chr8_3:61626473-61626492 None:intergenic 15.0%
!! TGGATACAATTATATAAAAA+AGG + chr8_3:61626474-61626493 None:intergenic 15.0%
!!! AAACTAATTTTGTTTAAGTT+TGG + chr8_3:61626576-61626595 None:intergenic 15.0%
!! AGAAATCAATGTAATTTAAT+GGG + chr8_3:61627240-61627259 None:intergenic 15.0%
!! AAGAAATCAATGTAATTTAA+TGG + chr8_3:61627241-61627260 None:intergenic 15.0%
!! GTAAAAAAAGATAAATTCAA+AGG + chr8_3:61628566-61628585 None:intergenic 15.0%
!!! CAATTTAGAATATGAAATTA+CGG + chr8_3:61628817-61628836 None:intergenic 15.0%
!! TATCATATATTAAAAACTGA+GGG + chr8_3:61629251-61629270 None:intergenic 15.0%
!! TTATCATATATTAAAAACTG+AGG + chr8_3:61629252-61629271 None:intergenic 15.0%
!! TTATACTATGTATCAAAATA+TGG - chr8_3:61629298-61629317 Msa1300180:five_prime_UTR 15.0%
!!! AGAATACAATTTGTTATTAT+TGG + chr8_3:61625336-61625355 None:intergenic 15.0%
!!! AGCTTTTTACTATTATATTA+TGG + chr8_3:61625671-61625690 None:intergenic 15.0%
!!! TGTAAAATTGATTCTATATT+TGG - chr8_3:61626362-61626381 Msa1300180:CDS 15.0%
!! GGATACAATTATATAAAAAA+GGG + chr8_3:61626473-61626492 None:intergenic 15.0%
!! TGGATACAATTATATAAAAA+AGG + chr8_3:61626474-61626493 None:intergenic 15.0%
!!! AAACTAATTTTGTTTAAGTT+TGG + chr8_3:61626576-61626595 None:intergenic 15.0%
!! AGAAATCAATGTAATTTAAT+GGG + chr8_3:61627240-61627259 None:intergenic 15.0%
!! AAGAAATCAATGTAATTTAA+TGG + chr8_3:61627241-61627260 None:intergenic 15.0%
!! GTAAAAAAAGATAAATTCAA+AGG + chr8_3:61628566-61628585 None:intergenic 15.0%
!!! CAATTTAGAATATGAAATTA+CGG + chr8_3:61628817-61628836 None:intergenic 15.0%
!! TATCATATATTAAAAACTGA+GGG + chr8_3:61629251-61629270 None:intergenic 15.0%
!! TTATCATATATTAAAAACTG+AGG + chr8_3:61629252-61629271 None:intergenic 15.0%
!! TTATACTATGTATCAAAATA+TGG - chr8_3:61629298-61629317 Msa1300180:five_prime_UTR 15.0%
!!! TTATTTTCTTTGACTCTATT+TGG - chr8_3:61625519-61625538 Msa1300180:three_prime_UTR 20.0%
!! AAAAGTAAACAAGTTTATGT+TGG + chr8_3:61625564-61625583 None:intergenic 20.0%
!!! AGTTATATTTCTGAAGAAAA+AGG - chr8_3:61625823-61625842 Msa1300180:intron 20.0%
!! GAAGTAATAAACTTGAAAAT+TGG + chr8_3:61626326-61626345 None:intergenic 20.0%
!!! AAAATTGATTCTATATTTGG+TGG - chr8_3:61626365-61626384 Msa1300180:CDS 20.0%
!!! ATTTTGTTTAAGTTTGGTTT+TGG + chr8_3:61626570-61626589 None:intergenic 20.0%
!! TATATATTATTACCACCAAA+TGG + chr8_3:61627142-61627161 None:intergenic 20.0%
!! ATTGTTGAATAAGTAACTTA+TGG + chr8_3:61627283-61627302 None:intergenic 20.0%
!! ACTTATTCAACAATAGTTAA+TGG - chr8_3:61627289-61627308 Msa1300180:intron 20.0%
!! TAGTAACTTAGTTATATGAA+TGG + chr8_3:61627424-61627443 None:intergenic 20.0%
!!! ATCCTTTGAAATTAAATATG+TGG + chr8_3:61628922-61628941 None:intergenic 20.0%
!!! TATTTATTGTTTTGAGAGTT+GGG - chr8_3:61629215-61629234 Msa1300180:five_prime_UTR 20.0%
!!! TTATTTTCTTTGACTCTATT+TGG - chr8_3:61625519-61625538 Msa1300180:three_prime_UTR 20.0%
!! AAAAGTAAACAAGTTTATGT+TGG + chr8_3:61625564-61625583 None:intergenic 20.0%
!!! AGTTATATTTCTGAAGAAAA+AGG - chr8_3:61625823-61625842 Msa1300180:intron 20.0%
!! GAAGTAATAAACTTGAAAAT+TGG + chr8_3:61626326-61626345 None:intergenic 20.0%
!!! AAAATTGATTCTATATTTGG+TGG - chr8_3:61626365-61626384 Msa1300180:CDS 20.0%
!!! ATTTTGTTTAAGTTTGGTTT+TGG + chr8_3:61626570-61626589 None:intergenic 20.0%
!! TATATATTATTACCACCAAA+TGG + chr8_3:61627142-61627161 None:intergenic 20.0%
!! ATTGTTGAATAAGTAACTTA+TGG + chr8_3:61627283-61627302 None:intergenic 20.0%
!! ACTTATTCAACAATAGTTAA+TGG - chr8_3:61627289-61627308 Msa1300180:intron 20.0%
!! TAGTAACTTAGTTATATGAA+TGG + chr8_3:61627424-61627443 None:intergenic 20.0%
!!! ATCCTTTGAAATTAAATATG+TGG + chr8_3:61628922-61628941 None:intergenic 20.0%
!!! TATTTATTGTTTTGAGAGTT+GGG - chr8_3:61629215-61629234 Msa1300180:five_prime_UTR 20.0%
! TTGATGAATAGATAGGAAAA+TGG + chr8_3:61625284-61625303 None:intergenic 25.0%
!! TTTTCCTATCTATTCATCAA+TGG - chr8_3:61625284-61625303 Msa1300180:three_prime_UTR 25.0%
! ATGGAACAATGAAGTAAAAT+AGG + chr8_3:61625410-61625429 None:intergenic 25.0%
! ACAAAAAAATGCTCTTTCAA+TGG - chr8_3:61625627-61625646 Msa1300180:intron 25.0%
!!! ATTTTAAGATACTGTTCCTA+CGG - chr8_3:61625718-61625737 Msa1300180:intron 25.0%
!!! GTCTTTTGTTGTTTGTTTTT+TGG - chr8_3:61625749-61625768 Msa1300180:intron 25.0%
!!! GTTGTTTGTTTTTTGGTTTT+TGG - chr8_3:61625756-61625775 Msa1300180:intron 25.0%
! TCAGATGATTTCAATTTCAT+TGG - chr8_3:61625889-61625908 Msa1300180:intron 25.0%
!!! AAAATGGATTATGACTAAAG+AGG + chr8_3:61626505-61626524 None:intergenic 25.0%
!! TTTAGCATCACAATAGTTTT+TGG - chr8_3:61626593-61626612 Msa1300180:CDS 25.0%
! ATTGTAAATAATCACACATG+TGG - chr8_3:61626718-61626737 Msa1300180:CDS 25.0%
! AAAACATGTGATCACAATTT+AGG + chr8_3:61626794-61626813 None:intergenic 25.0%
!!! CATGTTTTTGTTTTAAACCT+TGG - chr8_3:61626806-61626825 Msa1300180:CDS 25.0%
!! TAAGAAGCATAGTAATCAAT+AGG + chr8_3:61626886-61626905 None:intergenic 25.0%
! GCTGTATAGTTATGATATAT+AGG - chr8_3:61626963-61626982 Msa1300180:intron 25.0%
! ATAGTTATGATATATAGGTC+TGG - chr8_3:61626968-61626987 Msa1300180:intron 25.0%
!!! TAATGTTTAGCTTGTTATAC+AGG - chr8_3:61626993-61627012 Msa1300180:intron 25.0%
! CAAATGAATGTGAAAGAAAA+AGG + chr8_3:61627205-61627224 None:intergenic 25.0%
!!! TACATTGATTTCTTTTGTTG+TGG - chr8_3:61627247-61627266 Msa1300180:intron 25.0%
! TAGTTATATGAATGGAAACT+CGG + chr8_3:61627416-61627435 None:intergenic 25.0%
! CCAAATTACTTTAAGTAATC+CGG + chr8_3:61628393-61628412 None:intergenic 25.0%
! TACTTAAAGTAATTTGGAAG+AGG - chr8_3:61628396-61628415 Msa1300180:CDS 25.0%
! TTGAAATTTCGTTCATTTCT+TGG + chr8_3:61628756-61628775 None:intergenic 25.0%
! AGAATATGAAATTACGGTAA+AGG + chr8_3:61628811-61628830 None:intergenic 25.0%
!! CACCACATATTTAATTTCAA+AGG - chr8_3:61628917-61628936 Msa1300180:five_prime_UTR 25.0%
!!! GTATTTATTGTTTTGAGAGT+TGG - chr8_3:61629214-61629233 Msa1300180:five_prime_UTR 25.0%
! TGTATCAAAATATGGTATTC+AGG - chr8_3:61629306-61629325 Msa1300180:five_prime_UTR 25.0%
! GTATCAAAATATGGTATTCA+GGG - chr8_3:61629307-61629326 Msa1300180:five_prime_UTR 25.0%
! TTGATGAATAGATAGGAAAA+TGG + chr8_3:61625284-61625303 None:intergenic 25.0%
!! TTTTCCTATCTATTCATCAA+TGG - chr8_3:61625284-61625303 Msa1300180:three_prime_UTR 25.0%
! ATGGAACAATGAAGTAAAAT+AGG + chr8_3:61625410-61625429 None:intergenic 25.0%
! ACAAAAAAATGCTCTTTCAA+TGG - chr8_3:61625627-61625646 Msa1300180:intron 25.0%
!!! ATTTTAAGATACTGTTCCTA+CGG - chr8_3:61625718-61625737 Msa1300180:intron 25.0%
!!! GTCTTTTGTTGTTTGTTTTT+TGG - chr8_3:61625749-61625768 Msa1300180:intron 25.0%
!!! GTTGTTTGTTTTTTGGTTTT+TGG - chr8_3:61625756-61625775 Msa1300180:intron 25.0%
! TCAGATGATTTCAATTTCAT+TGG - chr8_3:61625889-61625908 Msa1300180:intron 25.0%
!!! AAAATGGATTATGACTAAAG+AGG + chr8_3:61626505-61626524 None:intergenic 25.0%
!! TTTAGCATCACAATAGTTTT+TGG - chr8_3:61626593-61626612 Msa1300180:CDS 25.0%
! ATTGTAAATAATCACACATG+TGG - chr8_3:61626718-61626737 Msa1300180:CDS 25.0%
! AAAACATGTGATCACAATTT+AGG + chr8_3:61626794-61626813 None:intergenic 25.0%
!!! CATGTTTTTGTTTTAAACCT+TGG - chr8_3:61626806-61626825 Msa1300180:CDS 25.0%
!! TAAGAAGCATAGTAATCAAT+AGG + chr8_3:61626886-61626905 None:intergenic 25.0%
! GCTGTATAGTTATGATATAT+AGG - chr8_3:61626963-61626982 Msa1300180:intron 25.0%
! ATAGTTATGATATATAGGTC+TGG - chr8_3:61626968-61626987 Msa1300180:intron 25.0%
!!! TAATGTTTAGCTTGTTATAC+AGG - chr8_3:61626993-61627012 Msa1300180:intron 25.0%
! CAAATGAATGTGAAAGAAAA+AGG + chr8_3:61627205-61627224 None:intergenic 25.0%
!!! TACATTGATTTCTTTTGTTG+TGG - chr8_3:61627247-61627266 Msa1300180:intron 25.0%
! TAGTTATATGAATGGAAACT+CGG + chr8_3:61627416-61627435 None:intergenic 25.0%
! CCAAATTACTTTAAGTAATC+CGG + chr8_3:61628393-61628412 None:intergenic 25.0%
! TACTTAAAGTAATTTGGAAG+AGG - chr8_3:61628396-61628415 Msa1300180:CDS 25.0%
! TTGAAATTTCGTTCATTTCT+TGG + chr8_3:61628756-61628775 None:intergenic 25.0%
! AGAATATGAAATTACGGTAA+AGG + chr8_3:61628811-61628830 None:intergenic 25.0%
!! CACCACATATTTAATTTCAA+AGG - chr8_3:61628917-61628936 Msa1300180:five_prime_UTR 25.0%
!!! GTATTTATTGTTTTGAGAGT+TGG - chr8_3:61629214-61629233 Msa1300180:five_prime_UTR 25.0%
! TGTATCAAAATATGGTATTC+AGG - chr8_3:61629306-61629325 Msa1300180:five_prime_UTR 25.0%
! GTATCAAAATATGGTATTCA+GGG - chr8_3:61629307-61629326 Msa1300180:five_prime_UTR 25.0%
GAATAGATAGGAAAATGGAA+AGG + chr8_3:61625279-61625298 None:intergenic 30.0%
AAAGCCATTGATGAATAGAT+AGG + chr8_3:61625291-61625310 None:intergenic 30.0%
! ATAGGTGAAAATGATGATGA+AGG + chr8_3:61625392-61625411 None:intergenic 30.0%
!! GAAAAAGGTTCTGAAGAATT+AGG - chr8_3:61625838-61625857 Msa1300180:intron 30.0%
! TTAGGCTTTTGTGAAATGTT+TGG - chr8_3:61625856-61625875 Msa1300180:intron 30.0%
! TAGGCTTTTGTGAAATGTTT+GGG - chr8_3:61625857-61625876 Msa1300180:intron 30.0%
! CTTTTACAGAAAACTCACTT+GGG + chr8_3:61625954-61625973 None:intergenic 30.0%
! CAAGTGAGTTTTCTGTAAAA+GGG - chr8_3:61625953-61625972 Msa1300180:intron 30.0%
! AAGTGAGTTTTCTGTAAAAG+GGG - chr8_3:61625954-61625973 Msa1300180:intron 30.0%
TTTCAAGCTTTCAAATTCTG+TGG - chr8_3:61625984-61626003 Msa1300180:intron 30.0%
ACTGCATATTGTCAAGTTTA+TGG - chr8_3:61626168-61626187 Msa1300180:CDS 30.0%
TCAAGTTTATGGATGTAACA+AGG - chr8_3:61626179-61626198 Msa1300180:CDS 30.0%
ATTCCATTCACAATGACTAT+AGG + chr8_3:61626267-61626286 None:intergenic 30.0%
! ATTTTGCATTTCTAACTAGC+TGG - chr8_3:61626393-61626412 Msa1300180:CDS 30.0%
ATTTCTAACTAGCTGGAATT+TGG - chr8_3:61626400-61626419 Msa1300180:CDS 30.0%
AGGCTAAAAATCAATTGTAG+AGG + chr8_3:61626434-61626453 None:intergenic 30.0%
TGACTAAAGAGGTTAATGTT+TGG + chr8_3:61626494-61626513 None:intergenic 30.0%
TCATGTTCTAGTATTCCAAT+AGG + chr8_3:61626627-61626646 None:intergenic 30.0%
!!! ATGAGCAGGGTTTTAAATTA+TGG - chr8_3:61626670-61626689 Msa1300180:CDS 30.0%
!!! TTTGTTTTAAACCTTGGTCT+TGG - chr8_3:61626812-61626831 Msa1300180:CDS 30.0%
!!! TTGTTTTAAACCTTGGTCTT+GGG - chr8_3:61626813-61626832 Msa1300180:CDS 30.0%
CGAATGTTGAAAACAAAACA+AGG + chr8_3:61626847-61626866 None:intergenic 30.0%
ATAGTAATCAATAGGTGCAA+CGG + chr8_3:61626878-61626897 None:intergenic 30.0%
! ACTATACAGCTTCTTATTTG+AGG + chr8_3:61626953-61626972 None:intergenic 30.0%
AGAAATTAAGCATCTCCTTA+TGG - chr8_3:61627319-61627338 Msa1300180:intron 30.0%
GAAGTTTATGATTGACCATA+AGG + chr8_3:61627337-61627356 None:intergenic 30.0%
! TTTTACATGGTACAACACTA+AGG + chr8_3:61627448-61627467 None:intergenic 30.0%
! ACTAAAAAAGCATAGGAAAC+TGG + chr8_3:61627557-61627576 None:intergenic 30.0%
! TCAGATGACTAAAAAAGCAT+AGG + chr8_3:61627564-61627583 None:intergenic 30.0%
TATGATTTGATACGATCCTA+TGG - chr8_3:61627598-61627617 Msa1300180:intron 30.0%
!! AATTGTTTTTCGTTGTACGA+AGG + chr8_3:61627797-61627816 None:intergenic 30.0%
! GCAACATTTTCATGAAGAAA+GGG + chr8_3:61627821-61627840 None:intergenic 30.0%
ATAACCAAAGGGTTATCAAA+GGG + chr8_3:61628046-61628065 None:intergenic 30.0%
AATAACCAAAGGGTTATCAA+AGG + chr8_3:61628047-61628066 None:intergenic 30.0%
ATAAAAGTCTATCAGACACT+CGG + chr8_3:61628123-61628142 None:intergenic 30.0%
TCCATCTGTAGGATTTAATT+CGG + chr8_3:61628146-61628165 None:intergenic 30.0%
TTATTGTCTGGTACCAATAT+AGG + chr8_3:61628181-61628200 None:intergenic 30.0%
TTCACGATATCATTATTGTC+TGG + chr8_3:61628193-61628212 None:intergenic 30.0%
! TGATATCGTGAACTTTGAAA+TGG - chr8_3:61628201-61628220 Msa1300180:intron 30.0%
CATTCACAAAATCTGAATCA+TGG + chr8_3:61628240-61628259 None:intergenic 30.0%
CCGGATTACTTAAAGTAATT+TGG - chr8_3:61628390-61628409 Msa1300180:CDS 30.0%
GTAATAGACTCTTCAAACTA+GGG + chr8_3:61628464-61628483 None:intergenic 30.0%
! CCTAATAGCCAATATCTTTT+GGG - chr8_3:61628674-61628693 Msa1300180:CDS 30.0%
TTTCATATTCCATTTGATGC+AGG - chr8_3:61628953-61628972 Msa1300180:five_prime_UTR 30.0%
! TTAAGATAACTGGCTTACAA+AGG + chr8_3:61629007-61629026 None:intergenic 30.0%
! CCTAAGTTGTTTAAGATAAC+TGG + chr8_3:61629017-61629036 None:intergenic 30.0%
CCAGTTATCTTAAACAACTT+AGG - chr8_3:61629014-61629033 Msa1300180:five_prime_UTR 30.0%
TGATATAGCCTAACATGTTT+AGG + chr8_3:61629191-61629210 None:intergenic 30.0%
AACATGTTAGGCTATATCAA+TGG - chr8_3:61629192-61629211 Msa1300180:five_prime_UTR 30.0%
GAATAGATAGGAAAATGGAA+AGG + chr8_3:61625279-61625298 None:intergenic 30.0%
AAAGCCATTGATGAATAGAT+AGG + chr8_3:61625291-61625310 None:intergenic 30.0%
! ATAGGTGAAAATGATGATGA+AGG + chr8_3:61625392-61625411 None:intergenic 30.0%
!! GAAAAAGGTTCTGAAGAATT+AGG - chr8_3:61625838-61625857 Msa1300180:intron 30.0%
! TTAGGCTTTTGTGAAATGTT+TGG - chr8_3:61625856-61625875 Msa1300180:intron 30.0%
! TAGGCTTTTGTGAAATGTTT+GGG - chr8_3:61625857-61625876 Msa1300180:intron 30.0%
! CTTTTACAGAAAACTCACTT+GGG + chr8_3:61625954-61625973 None:intergenic 30.0%
! CAAGTGAGTTTTCTGTAAAA+GGG - chr8_3:61625953-61625972 Msa1300180:intron 30.0%
! AAGTGAGTTTTCTGTAAAAG+GGG - chr8_3:61625954-61625973 Msa1300180:intron 30.0%
TTTCAAGCTTTCAAATTCTG+TGG - chr8_3:61625984-61626003 Msa1300180:intron 30.0%
ACTGCATATTGTCAAGTTTA+TGG - chr8_3:61626168-61626187 Msa1300180:CDS 30.0%
TCAAGTTTATGGATGTAACA+AGG - chr8_3:61626179-61626198 Msa1300180:CDS 30.0%
ATTCCATTCACAATGACTAT+AGG + chr8_3:61626267-61626286 None:intergenic 30.0%
! ATTTTGCATTTCTAACTAGC+TGG - chr8_3:61626393-61626412 Msa1300180:CDS 30.0%
ATTTCTAACTAGCTGGAATT+TGG - chr8_3:61626400-61626419 Msa1300180:CDS 30.0%
AGGCTAAAAATCAATTGTAG+AGG + chr8_3:61626434-61626453 None:intergenic 30.0%
TGACTAAAGAGGTTAATGTT+TGG + chr8_3:61626494-61626513 None:intergenic 30.0%
TCATGTTCTAGTATTCCAAT+AGG + chr8_3:61626627-61626646 None:intergenic 30.0%
!!! ATGAGCAGGGTTTTAAATTA+TGG - chr8_3:61626670-61626689 Msa1300180:CDS 30.0%
!!! TTTGTTTTAAACCTTGGTCT+TGG - chr8_3:61626812-61626831 Msa1300180:CDS 30.0%
!!! TTGTTTTAAACCTTGGTCTT+GGG - chr8_3:61626813-61626832 Msa1300180:CDS 30.0%
CGAATGTTGAAAACAAAACA+AGG + chr8_3:61626847-61626866 None:intergenic 30.0%
ATAGTAATCAATAGGTGCAA+CGG + chr8_3:61626878-61626897 None:intergenic 30.0%
! ACTATACAGCTTCTTATTTG+AGG + chr8_3:61626953-61626972 None:intergenic 30.0%
AGAAATTAAGCATCTCCTTA+TGG - chr8_3:61627319-61627338 Msa1300180:intron 30.0%
GAAGTTTATGATTGACCATA+AGG + chr8_3:61627337-61627356 None:intergenic 30.0%
! TTTTACATGGTACAACACTA+AGG + chr8_3:61627448-61627467 None:intergenic 30.0%
! ACTAAAAAAGCATAGGAAAC+TGG + chr8_3:61627557-61627576 None:intergenic 30.0%
! TCAGATGACTAAAAAAGCAT+AGG + chr8_3:61627564-61627583 None:intergenic 30.0%
TATGATTTGATACGATCCTA+TGG - chr8_3:61627598-61627617 Msa1300180:intron 30.0%
!! AATTGTTTTTCGTTGTACGA+AGG + chr8_3:61627797-61627816 None:intergenic 30.0%
! GCAACATTTTCATGAAGAAA+GGG + chr8_3:61627821-61627840 None:intergenic 30.0%
ATAACCAAAGGGTTATCAAA+GGG + chr8_3:61628046-61628065 None:intergenic 30.0%
AATAACCAAAGGGTTATCAA+AGG + chr8_3:61628047-61628066 None:intergenic 30.0%
ATAAAAGTCTATCAGACACT+CGG + chr8_3:61628123-61628142 None:intergenic 30.0%
TCCATCTGTAGGATTTAATT+CGG + chr8_3:61628146-61628165 None:intergenic 30.0%
TTATTGTCTGGTACCAATAT+AGG + chr8_3:61628181-61628200 None:intergenic 30.0%
TTCACGATATCATTATTGTC+TGG + chr8_3:61628193-61628212 None:intergenic 30.0%
! TGATATCGTGAACTTTGAAA+TGG - chr8_3:61628201-61628220 Msa1300180:intron 30.0%
CATTCACAAAATCTGAATCA+TGG + chr8_3:61628240-61628259 None:intergenic 30.0%
CCGGATTACTTAAAGTAATT+TGG - chr8_3:61628390-61628409 Msa1300180:CDS 30.0%
GTAATAGACTCTTCAAACTA+GGG + chr8_3:61628464-61628483 None:intergenic 30.0%
! CCTAATAGCCAATATCTTTT+GGG - chr8_3:61628674-61628693 Msa1300180:CDS 30.0%
TTTCATATTCCATTTGATGC+AGG - chr8_3:61628953-61628972 Msa1300180:five_prime_UTR 30.0%
! TTAAGATAACTGGCTTACAA+AGG + chr8_3:61629007-61629026 None:intergenic 30.0%
! CCTAAGTTGTTTAAGATAAC+TGG + chr8_3:61629017-61629036 None:intergenic 30.0%
CCAGTTATCTTAAACAACTT+AGG - chr8_3:61629014-61629033 Msa1300180:five_prime_UTR 30.0%
TGATATAGCCTAACATGTTT+AGG + chr8_3:61629191-61629210 None:intergenic 30.0%
AACATGTTAGGCTATATCAA+TGG - chr8_3:61629192-61629211 Msa1300180:five_prime_UTR 30.0%
!! GGAAAACTGATAGTTGATGA+AGG + chr8_3:61625258-61625277 None:intergenic 35.0%
TATTGGAGTGAAGAAGAAGA+AGG + chr8_3:61625319-61625338 None:intergenic 35.0%
!! AAAATGATGATGAAGGTGTC+AGG + chr8_3:61625385-61625404 None:intergenic 35.0%
AAGACTGAAAAAAACCCAGA+TGG + chr8_3:61625476-61625495 None:intergenic 35.0%
! ATTGATTCTGTTGCATGCAA+TGG - chr8_3:61625792-61625811 Msa1300180:intron 35.0%
TTACCATCAAGTTTCTTGCT+TGG + chr8_3:61625922-61625941 None:intergenic 35.0%
! CCTTTTACAGAAAACTCACT+TGG + chr8_3:61625955-61625974 None:intergenic 35.0%
! CCAAGTGAGTTTTCTGTAAA+AGG - chr8_3:61625952-61625971 Msa1300180:intron 35.0%
!! TCTCTCATTGATTTGAAGCT+AGG - chr8_3:61626027-61626046 Msa1300180:intron 35.0%
! CTAGGAAGATTTGATGATCA+TGG - chr8_3:61626045-61626064 Msa1300180:intron 35.0%
GACTCACAAGAAGACAAAAT+AGG + chr8_3:61626111-61626130 None:intergenic 35.0%
! CAAGGATCTTAGTTCTTGTA+AGG - chr8_3:61626197-61626216 Msa1300180:CDS 35.0%
CACAAACTTTATGCCTCTTA+TGG + chr8_3:61626227-61626246 None:intergenic 35.0%
! TAAGAGGCATAAAGTTTGTG+AGG - chr8_3:61626227-61626246 Msa1300180:CDS 35.0%
ACTCCTATAGTCATTGTGAA+TGG - chr8_3:61626261-61626280 Msa1300180:CDS 35.0%
AGGGTTGAGCAATAAATTAG+AGG + chr8_3:61626454-61626473 None:intergenic 35.0%
TGTTGAATTATGTCATGAGC+AGG - chr8_3:61626656-61626675 Msa1300180:CDS 35.0%
GTTGAATTATGTCATGAGCA+GGG - chr8_3:61626657-61626676 Msa1300180:CDS 35.0%
TAGTAATCAATAGGTGCAAC+GGG + chr8_3:61626877-61626896 None:intergenic 35.0%
CTAAGTAGAAACATGACTGA+AGG + chr8_3:61626921-61626940 None:intergenic 35.0%
! CTTCAGTCATGTTTCTACTT+AGG - chr8_3:61626919-61626938 Msa1300180:intron 35.0%
TCATTCTGTAAGAAAGCAGA+TGG + chr8_3:61627359-61627378 None:intergenic 35.0%
TGAATGGAAACTCGGAATTT+AGG + chr8_3:61627408-61627427 None:intergenic 35.0%
! CTTTTTCCCATTTCTAACGA+GGG + chr8_3:61627494-61627513 None:intergenic 35.0%
! TCTTTTTCCCATTTCTAACG+AGG + chr8_3:61627495-61627514 None:intergenic 35.0%
TCTTGATTGAAGATGTCCAT+TGG + chr8_3:61627765-61627784 None:intergenic 35.0%
! TTTTCGTTGTACGAAGGAAA+CGG + chr8_3:61627791-61627810 None:intergenic 35.0%
! GGCAACATTTTCATGAAGAA+AGG + chr8_3:61627822-61627841 None:intergenic 35.0%
GTTATCAAAGGGAATTTCCA+AGG + chr8_3:61628035-61628054 None:intergenic 35.0%
! AATTCCCTTTGATAACCCTT+TGG - chr8_3:61628039-61628058 Msa1300180:intron 35.0%
TCCGAATTAAATCCTACAGA+TGG - chr8_3:61628142-61628161 Msa1300180:intron 35.0%
AAGTCATCTCAGTCCTATAT+TGG - chr8_3:61628165-61628184 Msa1300180:intron 35.0%
!! GTGAACTTTGAAATGGAAGA+CGG - chr8_3:61628208-61628227 Msa1300180:intron 35.0%
!! TGAACTTTGAAATGGAAGAC+GGG - chr8_3:61628209-61628228 Msa1300180:intron 35.0%
TTGCATCATCTTCACAAGAA+AGG + chr8_3:61628273-61628292 None:intergenic 35.0%
GGTAATAGACTCTTCAAACT+AGG + chr8_3:61628465-61628484 None:intergenic 35.0%
! GCCTAATAGCCAATATCTTT+TGG - chr8_3:61628673-61628692 Msa1300180:CDS 35.0%
! CCCAAAAGATATTGGCTATT+AGG + chr8_3:61628677-61628696 None:intergenic 35.0%
TGGAAAGACCCAAAAGATAT+TGG + chr8_3:61628685-61628704 None:intergenic 35.0%
GTCACCAATTTATTCCTACT+AGG - chr8_3:61628714-61628733 Msa1300180:CDS 35.0%
GACTCCTAGTAGGAATAAAT+TGG + chr8_3:61628721-61628740 None:intergenic 35.0%
TCTAAATTGTCCTACGCAAA+AGG - chr8_3:61628828-61628847 Msa1300180:five_prime_UTR 35.0%
TTACGATGGAATGCAATGAT+GGG + chr8_3:61628887-61628906 None:intergenic 35.0%
GGTGAAACAATTACTTACGA+TGG + chr8_3:61628901-61628920 None:intergenic 35.0%
! AACTTGTTTCCTGCATCAAA+TGG + chr8_3:61628965-61628984 None:intergenic 35.0%
TTCTGCTCACTACTTTAACT+AGG - chr8_3:61629074-61629093 Msa1300180:five_prime_UTR 35.0%
TATAGCCTAACATGTTTAGG+AGG + chr8_3:61629188-61629207 None:intergenic 35.0%
!! GGAAAACTGATAGTTGATGA+AGG + chr8_3:61625258-61625277 None:intergenic 35.0%
TATTGGAGTGAAGAAGAAGA+AGG + chr8_3:61625319-61625338 None:intergenic 35.0%
!! AAAATGATGATGAAGGTGTC+AGG + chr8_3:61625385-61625404 None:intergenic 35.0%
AAGACTGAAAAAAACCCAGA+TGG + chr8_3:61625476-61625495 None:intergenic 35.0%
! ATTGATTCTGTTGCATGCAA+TGG - chr8_3:61625792-61625811 Msa1300180:intron 35.0%
TTACCATCAAGTTTCTTGCT+TGG + chr8_3:61625922-61625941 None:intergenic 35.0%
! CCTTTTACAGAAAACTCACT+TGG + chr8_3:61625955-61625974 None:intergenic 35.0%
! CCAAGTGAGTTTTCTGTAAA+AGG - chr8_3:61625952-61625971 Msa1300180:intron 35.0%
!! TCTCTCATTGATTTGAAGCT+AGG - chr8_3:61626027-61626046 Msa1300180:intron 35.0%
! CTAGGAAGATTTGATGATCA+TGG - chr8_3:61626045-61626064 Msa1300180:intron 35.0%
GACTCACAAGAAGACAAAAT+AGG + chr8_3:61626111-61626130 None:intergenic 35.0%
! CAAGGATCTTAGTTCTTGTA+AGG - chr8_3:61626197-61626216 Msa1300180:CDS 35.0%
CACAAACTTTATGCCTCTTA+TGG + chr8_3:61626227-61626246 None:intergenic 35.0%
! TAAGAGGCATAAAGTTTGTG+AGG - chr8_3:61626227-61626246 Msa1300180:CDS 35.0%
ACTCCTATAGTCATTGTGAA+TGG - chr8_3:61626261-61626280 Msa1300180:CDS 35.0%
AGGGTTGAGCAATAAATTAG+AGG + chr8_3:61626454-61626473 None:intergenic 35.0%
TGTTGAATTATGTCATGAGC+AGG - chr8_3:61626656-61626675 Msa1300180:CDS 35.0%
GTTGAATTATGTCATGAGCA+GGG - chr8_3:61626657-61626676 Msa1300180:CDS 35.0%
TAGTAATCAATAGGTGCAAC+GGG + chr8_3:61626877-61626896 None:intergenic 35.0%
CTAAGTAGAAACATGACTGA+AGG + chr8_3:61626921-61626940 None:intergenic 35.0%
! CTTCAGTCATGTTTCTACTT+AGG - chr8_3:61626919-61626938 Msa1300180:intron 35.0%
TCATTCTGTAAGAAAGCAGA+TGG + chr8_3:61627359-61627378 None:intergenic 35.0%
TGAATGGAAACTCGGAATTT+AGG + chr8_3:61627408-61627427 None:intergenic 35.0%
! CTTTTTCCCATTTCTAACGA+GGG + chr8_3:61627494-61627513 None:intergenic 35.0%
! TCTTTTTCCCATTTCTAACG+AGG + chr8_3:61627495-61627514 None:intergenic 35.0%
TCTTGATTGAAGATGTCCAT+TGG + chr8_3:61627765-61627784 None:intergenic 35.0%
! TTTTCGTTGTACGAAGGAAA+CGG + chr8_3:61627791-61627810 None:intergenic 35.0%
! GGCAACATTTTCATGAAGAA+AGG + chr8_3:61627822-61627841 None:intergenic 35.0%
GTTATCAAAGGGAATTTCCA+AGG + chr8_3:61628035-61628054 None:intergenic 35.0%
! AATTCCCTTTGATAACCCTT+TGG - chr8_3:61628039-61628058 Msa1300180:intron 35.0%
TCCGAATTAAATCCTACAGA+TGG - chr8_3:61628142-61628161 Msa1300180:intron 35.0%
AAGTCATCTCAGTCCTATAT+TGG - chr8_3:61628165-61628184 Msa1300180:intron 35.0%
!! GTGAACTTTGAAATGGAAGA+CGG - chr8_3:61628208-61628227 Msa1300180:intron 35.0%
!! TGAACTTTGAAATGGAAGAC+GGG - chr8_3:61628209-61628228 Msa1300180:intron 35.0%
TTGCATCATCTTCACAAGAA+AGG + chr8_3:61628273-61628292 None:intergenic 35.0%
GGTAATAGACTCTTCAAACT+AGG + chr8_3:61628465-61628484 None:intergenic 35.0%
! GCCTAATAGCCAATATCTTT+TGG - chr8_3:61628673-61628692 Msa1300180:CDS 35.0%
! CCCAAAAGATATTGGCTATT+AGG + chr8_3:61628677-61628696 None:intergenic 35.0%
TGGAAAGACCCAAAAGATAT+TGG + chr8_3:61628685-61628704 None:intergenic 35.0%
GTCACCAATTTATTCCTACT+AGG - chr8_3:61628714-61628733 Msa1300180:CDS 35.0%
GACTCCTAGTAGGAATAAAT+TGG + chr8_3:61628721-61628740 None:intergenic 35.0%
TCTAAATTGTCCTACGCAAA+AGG - chr8_3:61628828-61628847 Msa1300180:five_prime_UTR 35.0%
TTACGATGGAATGCAATGAT+GGG + chr8_3:61628887-61628906 None:intergenic 35.0%
GGTGAAACAATTACTTACGA+TGG + chr8_3:61628901-61628920 None:intergenic 35.0%
! AACTTGTTTCCTGCATCAAA+TGG + chr8_3:61628965-61628984 None:intergenic 35.0%
TTCTGCTCACTACTTTAACT+AGG - chr8_3:61629074-61629093 Msa1300180:five_prime_UTR 35.0%
TATAGCCTAACATGTTTAGG+AGG + chr8_3:61629188-61629207 None:intergenic 35.0%
! AGAAAAGCACGTGATGAGAA+TGG + chr8_3:61625433-61625452 None:intergenic 40.0%
!!! TTTTTTTCTTCCCTGCCATC+TGG - chr8_3:61625458-61625477 Msa1300180:three_prime_UTR 40.0%
!!! TTTTTTCTTCCCTGCCATCT+GGG - chr8_3:61625459-61625478 Msa1300180:three_prime_UTR 40.0%
TGAAAAAAACCCAGATGGCA+GGG + chr8_3:61625471-61625490 None:intergenic 40.0%
! ATGCTCTTTCAATGGTTCTG+AGG - chr8_3:61625635-61625654 Msa1300180:intron 40.0%
CAAAAGACTTCAGTTTCCGT+AGG + chr8_3:61625737-61625756 None:intergenic 40.0%
TGCAACAGAATCAATGAGCA+AGG + chr8_3:61625787-61625806 None:intergenic 40.0%
TGTTGCATGCAATGGAATCT+TGG - chr8_3:61625800-61625819 Msa1300180:intron 40.0%
GTTCCAAGCAAGAAACTTGA+TGG - chr8_3:61625916-61625935 Msa1300180:intron 40.0%
CAAGCTTTCAAATTCTGTGG+TGG - chr8_3:61625987-61626006 Msa1300180:intron 40.0%
! AATTCTGTGGTGGAATCCAA+TGG - chr8_3:61625997-61626016 Msa1300180:intron 40.0%
AATGAGAGAATCCCAACCAT+TGG + chr8_3:61626016-61626035 None:intergenic 40.0%
TGGCAATGCTTCAATTGATG+CGG - chr8_3:61626065-61626084 Msa1300180:intron 40.0%
! ATTGATGCGGCATTTTCCAA+AGG - chr8_3:61626078-61626097 Msa1300180:intron 40.0%
CTTGTAAGGACTACCATAAG+AGG - chr8_3:61626211-61626230 Msa1300180:CDS 40.0%
CACAATGACTATAGGAGTCT+TGG + chr8_3:61626259-61626278 None:intergenic 40.0%
TTGTGAATGGAATTGAGCAG+AGG - chr8_3:61626274-61626293 Msa1300180:CDS 40.0%
!! GGTTTTGTCAACAATGTAGC+AGG - chr8_3:61626295-61626314 Msa1300180:CDS 40.0%
TTGTCAACAATGTAGCAGGT+TGG - chr8_3:61626299-61626318 Msa1300180:CDS 40.0%
!! TTTTTGGTGTGTGTGCCTAT+TGG - chr8_3:61626609-61626628 Msa1300180:CDS 40.0%
TTGCTGTCTGAGTTTGATGA+TGG - chr8_3:61627022-61627041 Msa1300180:intron 40.0%
! GTTTTCTTCGACGCTCATTA+TGG + chr8_3:61627078-61627097 None:intergenic 40.0%
GCGTTCACTCTACAAATTCT+GGG - chr8_3:61627104-61627123 Msa1300180:intron 40.0%
! TGTAATTTAATGGGCGCAGA+GGG + chr8_3:61627231-61627250 None:intergenic 40.0%
! ATGTAATTTAATGGGCGCAG+AGG + chr8_3:61627232-61627251 None:intergenic 40.0%
CTGATATCTGCAAGAACCAT+AGG + chr8_3:61627617-61627636 None:intergenic 40.0%
TCTTGCAGATATCAGATTCC+AGG - chr8_3:61627622-61627641 Msa1300180:intron 40.0%
CTTGCAGATATCAGATTCCA+GGG - chr8_3:61627623-61627642 Msa1300180:intron 40.0%
! AGCATCTTTTCTCTATCCAG+AGG - chr8_3:61627661-61627680 Msa1300180:intron 40.0%
GCTTCATGTTCTGCTTTCAT+AGG + chr8_3:61627710-61627729 None:intergenic 40.0%
ATGAAAGCAGAACATGAAGC+TGG - chr8_3:61627710-61627729 Msa1300180:intron 40.0%
ATTGAAGTCTTCGCTTCCTA+AGG + chr8_3:61627912-61627931 None:intergenic 40.0%
! TAATCCTTGAATGCTTGGTG+CGG + chr8_3:61627945-61627964 None:intergenic 40.0%
CCTGATAATCCTTGAATGCT+TGG + chr8_3:61627950-61627969 None:intergenic 40.0%
CCAAGCATTCAAGGATTATC+AGG - chr8_3:61627947-61627966 Msa1300180:intron 40.0%
TTATGCTGTAGACATGGCTA+TGG + chr8_3:61628078-61628097 None:intergenic 40.0%
GTGATCTTATGCTGTAGACA+TGG + chr8_3:61628084-61628103 None:intergenic 40.0%
CGACAGTTGTAGTAAATCGA+TGG + chr8_3:61628296-61628315 None:intergenic 40.0%
GCATCATAGACAATCATTGC+AGG - chr8_3:61628336-61628355 Msa1300180:CDS 40.0%
TTGATTCTTCTTGCACTCTC+CGG - chr8_3:61628371-61628390 Msa1300180:CDS 40.0%
CACACAATCGAACTAGTCAT+TGG + chr8_3:61628486-61628505 None:intergenic 40.0%
! TGACTAGTTCGATTGTGTGT+AGG - chr8_3:61628487-61628506 Msa1300180:CDS 40.0%
! GACTAGTTCGATTGTGTGTA+GGG - chr8_3:61628488-61628507 Msa1300180:CDS 40.0%
! AAATTGGTGACTCGTGCAAT+TGG + chr8_3:61628705-61628724 None:intergenic 40.0%
! GTGTTTTTCTGACTCCTAGT+AGG + chr8_3:61628731-61628750 None:intergenic 40.0%
CTTACGATGGAATGCAATGA+TGG + chr8_3:61628888-61628907 None:intergenic 40.0%
TCTTAAACAACTTAGGCCAC+CGG - chr8_3:61629021-61629040 Msa1300180:five_prime_UTR 40.0%
AAGTAGTGAGCAGAAGAGAA+TGG + chr8_3:61629069-61629088 None:intergenic 40.0%
! AGAAAAGCACGTGATGAGAA+TGG + chr8_3:61625433-61625452 None:intergenic 40.0%
!!! TTTTTTTCTTCCCTGCCATC+TGG - chr8_3:61625458-61625477 Msa1300180:three_prime_UTR 40.0%
!!! TTTTTTCTTCCCTGCCATCT+GGG - chr8_3:61625459-61625478 Msa1300180:three_prime_UTR 40.0%
TGAAAAAAACCCAGATGGCA+GGG + chr8_3:61625471-61625490 None:intergenic 40.0%
! ATGCTCTTTCAATGGTTCTG+AGG - chr8_3:61625635-61625654 Msa1300180:intron 40.0%
CAAAAGACTTCAGTTTCCGT+AGG + chr8_3:61625737-61625756 None:intergenic 40.0%
TGCAACAGAATCAATGAGCA+AGG + chr8_3:61625787-61625806 None:intergenic 40.0%
TGTTGCATGCAATGGAATCT+TGG - chr8_3:61625800-61625819 Msa1300180:intron 40.0%
GTTCCAAGCAAGAAACTTGA+TGG - chr8_3:61625916-61625935 Msa1300180:intron 40.0%
CAAGCTTTCAAATTCTGTGG+TGG - chr8_3:61625987-61626006 Msa1300180:intron 40.0%
! AATTCTGTGGTGGAATCCAA+TGG - chr8_3:61625997-61626016 Msa1300180:intron 40.0%
AATGAGAGAATCCCAACCAT+TGG + chr8_3:61626016-61626035 None:intergenic 40.0%
TGGCAATGCTTCAATTGATG+CGG - chr8_3:61626065-61626084 Msa1300180:intron 40.0%
! ATTGATGCGGCATTTTCCAA+AGG - chr8_3:61626078-61626097 Msa1300180:intron 40.0%
CTTGTAAGGACTACCATAAG+AGG - chr8_3:61626211-61626230 Msa1300180:CDS 40.0%
CACAATGACTATAGGAGTCT+TGG + chr8_3:61626259-61626278 None:intergenic 40.0%
TTGTGAATGGAATTGAGCAG+AGG - chr8_3:61626274-61626293 Msa1300180:CDS 40.0%
!! GGTTTTGTCAACAATGTAGC+AGG - chr8_3:61626295-61626314 Msa1300180:CDS 40.0%
TTGTCAACAATGTAGCAGGT+TGG - chr8_3:61626299-61626318 Msa1300180:CDS 40.0%
!! TTTTTGGTGTGTGTGCCTAT+TGG - chr8_3:61626609-61626628 Msa1300180:CDS 40.0%
TTGCTGTCTGAGTTTGATGA+TGG - chr8_3:61627022-61627041 Msa1300180:intron 40.0%
! GTTTTCTTCGACGCTCATTA+TGG + chr8_3:61627078-61627097 None:intergenic 40.0%
GCGTTCACTCTACAAATTCT+GGG - chr8_3:61627104-61627123 Msa1300180:intron 40.0%
! TGTAATTTAATGGGCGCAGA+GGG + chr8_3:61627231-61627250 None:intergenic 40.0%
! ATGTAATTTAATGGGCGCAG+AGG + chr8_3:61627232-61627251 None:intergenic 40.0%
CTGATATCTGCAAGAACCAT+AGG + chr8_3:61627617-61627636 None:intergenic 40.0%
TCTTGCAGATATCAGATTCC+AGG - chr8_3:61627622-61627641 Msa1300180:intron 40.0%
CTTGCAGATATCAGATTCCA+GGG - chr8_3:61627623-61627642 Msa1300180:intron 40.0%
! AGCATCTTTTCTCTATCCAG+AGG - chr8_3:61627661-61627680 Msa1300180:intron 40.0%
GCTTCATGTTCTGCTTTCAT+AGG + chr8_3:61627710-61627729 None:intergenic 40.0%
ATGAAAGCAGAACATGAAGC+TGG - chr8_3:61627710-61627729 Msa1300180:intron 40.0%
ATTGAAGTCTTCGCTTCCTA+AGG + chr8_3:61627912-61627931 None:intergenic 40.0%
! TAATCCTTGAATGCTTGGTG+CGG + chr8_3:61627945-61627964 None:intergenic 40.0%
CCTGATAATCCTTGAATGCT+TGG + chr8_3:61627950-61627969 None:intergenic 40.0%
CCAAGCATTCAAGGATTATC+AGG - chr8_3:61627947-61627966 Msa1300180:intron 40.0%
TTATGCTGTAGACATGGCTA+TGG + chr8_3:61628078-61628097 None:intergenic 40.0%
GTGATCTTATGCTGTAGACA+TGG + chr8_3:61628084-61628103 None:intergenic 40.0%
CGACAGTTGTAGTAAATCGA+TGG + chr8_3:61628296-61628315 None:intergenic 40.0%
GCATCATAGACAATCATTGC+AGG - chr8_3:61628336-61628355 Msa1300180:CDS 40.0%
TTGATTCTTCTTGCACTCTC+CGG - chr8_3:61628371-61628390 Msa1300180:CDS 40.0%
CACACAATCGAACTAGTCAT+TGG + chr8_3:61628486-61628505 None:intergenic 40.0%
! TGACTAGTTCGATTGTGTGT+AGG - chr8_3:61628487-61628506 Msa1300180:CDS 40.0%
! GACTAGTTCGATTGTGTGTA+GGG - chr8_3:61628488-61628507 Msa1300180:CDS 40.0%
! AAATTGGTGACTCGTGCAAT+TGG + chr8_3:61628705-61628724 None:intergenic 40.0%
! GTGTTTTTCTGACTCCTAGT+AGG + chr8_3:61628731-61628750 None:intergenic 40.0%
CTTACGATGGAATGCAATGA+TGG + chr8_3:61628888-61628907 None:intergenic 40.0%
TCTTAAACAACTTAGGCCAC+CGG - chr8_3:61629021-61629040 Msa1300180:five_prime_UTR 40.0%
AAGTAGTGAGCAGAAGAGAA+TGG + chr8_3:61629069-61629088 None:intergenic 40.0%
AAGCACGTGATGAGAATGGA+TGG + chr8_3:61625429-61625448 None:intergenic 45.0%
CTGAAAAAAACCCAGATGGC+AGG + chr8_3:61625472-61625491 None:intergenic 45.0%
! TGTGGTGGAATCCAATGGTT+GGG - chr8_3:61626002-61626021 Msa1300180:intron 45.0%
!! CAAAATAGGTGCTGCTCCTT+TGG + chr8_3:61626097-61626116 None:intergenic 45.0%
TATGGCCTGCAAGTCGTTTA+CGG + chr8_3:61627060-61627079 None:intergenic 45.0%
TTTGTAGAGTGAACGCCTTG+TGG + chr8_3:61627100-61627119 None:intergenic 45.0%
GGCGTTCACTCTACAAATTC+TGG - chr8_3:61627103-61627122 Msa1300180:intron 45.0%
AGACTGTTTCAGCCATTTGG+TGG - chr8_3:61627127-61627146 Msa1300180:intron 45.0%
CATGTAAAATGCCGCTGACA+CGG - chr8_3:61627459-61627478 Msa1300180:CDS 45.0%
TTTCCGTCCCTCGTTAGAAA+TGG - chr8_3:61627484-61627503 Msa1300180:CDS 45.0%
TTCCGTCCCTCGTTAGAAAT+GGG - chr8_3:61627485-61627504 Msa1300180:CDS 45.0%
TTCCCATTTCTAACGAGGGA+CGG + chr8_3:61627490-61627509 None:intergenic 45.0%
TAGAGAAAAGATGCTGCTGG+TGG + chr8_3:61627656-61627675 None:intergenic 45.0%
GGATAGAGAAAAGATGCTGC+TGG + chr8_3:61627659-61627678 None:intergenic 45.0%
TATCCAGAGGTCTTCCAAAG+TGG - chr8_3:61627674-61627693 Msa1300180:intron 45.0%
! AAACCACTTTGGAAGACCTC+TGG + chr8_3:61627680-61627699 None:intergenic 45.0%
AGGTCTTCCAAAGTGGTTTC+TGG - chr8_3:61627681-61627700 Msa1300180:intron 45.0%
TAGGTCTCCAGAAACCACTT+TGG + chr8_3:61627691-61627710 None:intergenic 45.0%
!! CAGAACATGAAGCTGGCTTT+AGG - chr8_3:61627717-61627736 Msa1300180:intron 45.0%
! TGAAGATGTCCATTGGTGAC+AGG + chr8_3:61627758-61627777 None:intergenic 45.0%
AATGTTGCCACATCCACTAC+AGG - chr8_3:61627833-61627852 Msa1300180:intron 45.0%
ACTGAACTTACTGCCTGTAG+TGG + chr8_3:61627849-61627868 None:intergenic 45.0%
AGCCATTATGCTCATGCCAT+TGG - chr8_3:61627878-61627897 Msa1300180:intron 45.0%
AGCCAATGGCATGAGCATAA+TGG + chr8_3:61627883-61627902 None:intergenic 45.0%
!! GGACTGGCTTGAAGTGTTAT+TGG + chr8_3:61628014-61628033 None:intergenic 45.0%
TAACACTTCAAGCCAGTCCT+TGG - chr8_3:61628015-61628034 Msa1300180:intron 45.0%
CAAAGGGAATTTCCAAGGAC+TGG + chr8_3:61628030-61628049 None:intergenic 45.0%
GGCTGCTTGGAATAACCAAA+GGG + chr8_3:61628057-61628076 None:intergenic 45.0%
TGGCTGCTTGGAATAACCAA+AGG + chr8_3:61628058-61628077 None:intergenic 45.0%
CTGAGATGACTTCCATCTGT+AGG + chr8_3:61628157-61628176 None:intergenic 45.0%
CCTACGCAAAAGGACTAACA+CGG - chr8_3:61628838-61628857 Msa1300180:five_prime_UTR 45.0%
CTTAAACAACTTAGGCCACC+GGG - chr8_3:61629022-61629041 Msa1300180:five_prime_UTR 45.0%
CATTGCAAGCTTCTACTTCC+CGG + chr8_3:61629043-61629062 None:intergenic 45.0%
GTTCATAATCCGAATCAGCG+CGG + chr8_3:61629146-61629165 None:intergenic 45.0%
GCTGACCTCCTAAACATGTT+AGG - chr8_3:61629180-61629199 Msa1300180:five_prime_UTR 45.0%
AAGCACGTGATGAGAATGGA+TGG + chr8_3:61625429-61625448 None:intergenic 45.0%
CTGAAAAAAACCCAGATGGC+AGG + chr8_3:61625472-61625491 None:intergenic 45.0%
! TGTGGTGGAATCCAATGGTT+GGG - chr8_3:61626002-61626021 Msa1300180:intron 45.0%
!! CAAAATAGGTGCTGCTCCTT+TGG + chr8_3:61626097-61626116 None:intergenic 45.0%
TATGGCCTGCAAGTCGTTTA+CGG + chr8_3:61627060-61627079 None:intergenic 45.0%
TTTGTAGAGTGAACGCCTTG+TGG + chr8_3:61627100-61627119 None:intergenic 45.0%
GGCGTTCACTCTACAAATTC+TGG - chr8_3:61627103-61627122 Msa1300180:intron 45.0%
AGACTGTTTCAGCCATTTGG+TGG - chr8_3:61627127-61627146 Msa1300180:intron 45.0%
CATGTAAAATGCCGCTGACA+CGG - chr8_3:61627459-61627478 Msa1300180:CDS 45.0%
TTTCCGTCCCTCGTTAGAAA+TGG - chr8_3:61627484-61627503 Msa1300180:CDS 45.0%
TTCCGTCCCTCGTTAGAAAT+GGG - chr8_3:61627485-61627504 Msa1300180:CDS 45.0%
TTCCCATTTCTAACGAGGGA+CGG + chr8_3:61627490-61627509 None:intergenic 45.0%
TAGAGAAAAGATGCTGCTGG+TGG + chr8_3:61627656-61627675 None:intergenic 45.0%
GGATAGAGAAAAGATGCTGC+TGG + chr8_3:61627659-61627678 None:intergenic 45.0%
TATCCAGAGGTCTTCCAAAG+TGG - chr8_3:61627674-61627693 Msa1300180:intron 45.0%
! AAACCACTTTGGAAGACCTC+TGG + chr8_3:61627680-61627699 None:intergenic 45.0%
AGGTCTTCCAAAGTGGTTTC+TGG - chr8_3:61627681-61627700 Msa1300180:intron 45.0%
TAGGTCTCCAGAAACCACTT+TGG + chr8_3:61627691-61627710 None:intergenic 45.0%
!! CAGAACATGAAGCTGGCTTT+AGG - chr8_3:61627717-61627736 Msa1300180:intron 45.0%
! TGAAGATGTCCATTGGTGAC+AGG + chr8_3:61627758-61627777 None:intergenic 45.0%
AATGTTGCCACATCCACTAC+AGG - chr8_3:61627833-61627852 Msa1300180:intron 45.0%
ACTGAACTTACTGCCTGTAG+TGG + chr8_3:61627849-61627868 None:intergenic 45.0%
AGCCATTATGCTCATGCCAT+TGG - chr8_3:61627878-61627897 Msa1300180:intron 45.0%
AGCCAATGGCATGAGCATAA+TGG + chr8_3:61627883-61627902 None:intergenic 45.0%
!! GGACTGGCTTGAAGTGTTAT+TGG + chr8_3:61628014-61628033 None:intergenic 45.0%
TAACACTTCAAGCCAGTCCT+TGG - chr8_3:61628015-61628034 Msa1300180:intron 45.0%
CAAAGGGAATTTCCAAGGAC+TGG + chr8_3:61628030-61628049 None:intergenic 45.0%
GGCTGCTTGGAATAACCAAA+GGG + chr8_3:61628057-61628076 None:intergenic 45.0%
TGGCTGCTTGGAATAACCAA+AGG + chr8_3:61628058-61628077 None:intergenic 45.0%
CTGAGATGACTTCCATCTGT+AGG + chr8_3:61628157-61628176 None:intergenic 45.0%
CCTACGCAAAAGGACTAACA+CGG - chr8_3:61628838-61628857 Msa1300180:five_prime_UTR 45.0%
CTTAAACAACTTAGGCCACC+GGG - chr8_3:61629022-61629041 Msa1300180:five_prime_UTR 45.0%
CATTGCAAGCTTCTACTTCC+CGG + chr8_3:61629043-61629062 None:intergenic 45.0%
GTTCATAATCCGAATCAGCG+CGG + chr8_3:61629146-61629165 None:intergenic 45.0%
GCTGACCTCCTAAACATGTT+AGG - chr8_3:61629180-61629199 Msa1300180:five_prime_UTR 45.0%
! CTGTGGTGGAATCCAATGGT+TGG - chr8_3:61626001-61626020 Msa1300180:intron 50.0%
GAGTGCACTCTCACTCTCTT+GGG + chr8_3:61626144-61626163 None:intergenic 50.0%
TGAGTGCACTCTCACTCTCT+TGG + chr8_3:61626145-61626164 None:intergenic 50.0%
GGCTTCAAAACCCAAGACCA+AGG + chr8_3:61626826-61626845 None:intergenic 50.0%
AGTTGCCGTAAACGACTTGC+AGG - chr8_3:61627052-61627071 Msa1300180:intron 50.0%
!! GAGCGTCGAAGAAAACCACA+AGG - chr8_3:61627082-61627101 Msa1300180:intron 50.0%
GGGAGACTGTTTCAGCCATT+TGG - chr8_3:61627124-61627143 Msa1300180:intron 50.0%
! CGTGTCAGCGGCATTTTACA+TGG + chr8_3:61627461-61627480 None:intergenic 50.0%
AAAAGATGCTGCTGGTGGCT+TGG + chr8_3:61627651-61627670 None:intergenic 50.0%
TCTTCTGTGCCTGTCACCAA+TGG - chr8_3:61627746-61627765 Msa1300180:intron 50.0%
!! CTTACTGCCTGTAGTGGATG+TGG + chr8_3:61627843-61627862 None:intergenic 50.0%
! TCCTAAGGAGGTGTAGCCAA+TGG + chr8_3:61627897-61627916 None:intergenic 50.0%
GAAGTCTTCGCTTCCTAAGG+AGG + chr8_3:61627909-61627928 None:intergenic 50.0%
CATACCGCACCAAGCATTCA+AGG - chr8_3:61627938-61627957 Msa1300180:intron 50.0%
TAGACATGGCTATGGCTGCT+TGG + chr8_3:61628070-61628089 None:intergenic 50.0%
! TCTATCAGACACTCGGCTTG+AGG + chr8_3:61628116-61628135 None:intergenic 50.0%
! CCGTGTTAGTCCTTTTGCGT+AGG + chr8_3:61628841-61628860 None:intergenic 50.0%
! CTAGGTTGCTCACGCTGATT+CGG - chr8_3:61629092-61629111 Msa1300180:five_prime_UTR 50.0%
!! CTAGTTTGTCCGCGCTGATT+CGG - chr8_3:61629134-61629153 Msa1300180:five_prime_UTR 50.0%
! CTGTGGTGGAATCCAATGGT+TGG - chr8_3:61626001-61626020 Msa1300180:intron 50.0%
GAGTGCACTCTCACTCTCTT+GGG + chr8_3:61626144-61626163 None:intergenic 50.0%
TGAGTGCACTCTCACTCTCT+TGG + chr8_3:61626145-61626164 None:intergenic 50.0%
GGCTTCAAAACCCAAGACCA+AGG + chr8_3:61626826-61626845 None:intergenic 50.0%
AGTTGCCGTAAACGACTTGC+AGG - chr8_3:61627052-61627071 Msa1300180:intron 50.0%
!! GAGCGTCGAAGAAAACCACA+AGG - chr8_3:61627082-61627101 Msa1300180:intron 50.0%
GGGAGACTGTTTCAGCCATT+TGG - chr8_3:61627124-61627143 Msa1300180:intron 50.0%
! CGTGTCAGCGGCATTTTACA+TGG + chr8_3:61627461-61627480 None:intergenic 50.0%
AAAAGATGCTGCTGGTGGCT+TGG + chr8_3:61627651-61627670 None:intergenic 50.0%
TCTTCTGTGCCTGTCACCAA+TGG - chr8_3:61627746-61627765 Msa1300180:intron 50.0%
!! CTTACTGCCTGTAGTGGATG+TGG + chr8_3:61627843-61627862 None:intergenic 50.0%
! TCCTAAGGAGGTGTAGCCAA+TGG + chr8_3:61627897-61627916 None:intergenic 50.0%
GAAGTCTTCGCTTCCTAAGG+AGG + chr8_3:61627909-61627928 None:intergenic 50.0%
CATACCGCACCAAGCATTCA+AGG - chr8_3:61627938-61627957 Msa1300180:intron 50.0%
TAGACATGGCTATGGCTGCT+TGG + chr8_3:61628070-61628089 None:intergenic 50.0%
! TCTATCAGACACTCGGCTTG+AGG + chr8_3:61628116-61628135 None:intergenic 50.0%
! CCGTGTTAGTCCTTTTGCGT+AGG + chr8_3:61628841-61628860 None:intergenic 50.0%
! CTAGGTTGCTCACGCTGATT+CGG - chr8_3:61629092-61629111 Msa1300180:five_prime_UTR 50.0%
!! CTAGTTTGTCCGCGCTGATT+CGG - chr8_3:61629134-61629153 Msa1300180:five_prime_UTR 50.0%
TGCACTCTCACTCTCTTGGG+AGG + chr8_3:61626141-61626160 None:intergenic 55.0%
GGACGGAAAATCCGTGTCAG+CGG + chr8_3:61627473-61627492 None:intergenic 55.0%
! GCCATTGGCTACACCTCCTT+AGG - chr8_3:61627893-61627912 Msa1300180:intron 55.0%
TGCAAGCTTCTACTTCCCGG+TGG + chr8_3:61629040-61629059 None:intergenic 55.0%
TGCACTCTCACTCTCTTGGG+AGG + chr8_3:61626141-61626160 None:intergenic 55.0%
GGACGGAAAATCCGTGTCAG+CGG + chr8_3:61627473-61627492 None:intergenic 55.0%
! GCCATTGGCTACACCTCCTT+AGG - chr8_3:61627893-61627912 Msa1300180:intron 55.0%
TGCAAGCTTCTACTTCCCGG+TGG + chr8_3:61629040-61629059 None:intergenic 55.0%
!! CTGCTGGTGGCTTGGTTCCC+TGG + chr8_3:61627643-61627662 None:intergenic 65.0%
!! CTGCTGGTGGCTTGGTTCCC+TGG + chr8_3:61627643-61627662 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 61625214 61629330 61625214 ID=Msa1300180;Name=Msa1300180
chr8_3 mRNA 61625214 61629330 61625214 ID=Msa1300180-mRNA-1;Parent=Msa1300180;Name=Msa1300180-mRNA-1;_AED=0.09;_eAED=0.09;_QI=597|1|1|1|0.66|0.5|4|371|470
chr8_3 exon 61625214 61625569 61625214 ID=Msa1300180-mRNA-1:exon:18222;Parent=Msa1300180-mRNA-1
chr8_3 exon 61626127 61626914 61626127 ID=Msa1300180-mRNA-1:exon:18221;Parent=Msa1300180-mRNA-1
chr8_3 exon 61627396 61627529 61627396 ID=Msa1300180-mRNA-1:exon:18220;Parent=Msa1300180-mRNA-1
chr8_3 exon 61628228 61629330 61628228 ID=Msa1300180-mRNA-1:exon:18219;Parent=Msa1300180-mRNA-1
chr8_3 five_prime_UTR 61628734 61629330 61628734 ID=Msa1300180-mRNA-1:five_prime_utr;Parent=Msa1300180-mRNA-1
chr8_3 CDS 61628228 61628733 61628228 ID=Msa1300180-mRNA-1:cds;Parent=Msa1300180-mRNA-1
chr8_3 CDS 61627396 61627529 61627396 ID=Msa1300180-mRNA-1:cds;Parent=Msa1300180-mRNA-1
chr8_3 CDS 61626142 61626914 61626142 ID=Msa1300180-mRNA-1:cds;Parent=Msa1300180-mRNA-1
chr8_3 three_prime_UTR 61626127 61626141 61626127 ID=Msa1300180-mRNA-1:three_prime_utr;Parent=Msa1300180-mRNA-1
chr8_3 three_prime_UTR 61625214 61625569 61625214 ID=Msa1300180-mRNA-1:three_prime_utr;Parent=Msa1300180-mRNA-1
Gene Sequence

>Msa1300180

ATGGAATCTTGGAGTTATATTTCTGAAGAAAAAGGTTCTGAAGAATTAGGCTTTTGTGAAATGTTTGGGAAACAATATTCAGATGATTTCAATTTCATTGGAAGTGTTCCAAGCAAGAAACTTGATGGTAAATTTGATGACCCAAGTGAGTTTTCTGTAAAAGGGGACACAAATTTCAAGCTTTCAAATTCTGTGGTGGAATCCAATGGTTGGGATTCTCTCATTGATTTGAAGCTAGGAAGATTTGATGATCATGGCAATGCTTCAATTGATGCGGCATTTTCCAAAGGAGCAGCACCTATTTTGTCTTCTTGTGAGTCTTCAACACCTCCCAAGAGAGTGAGAGTGCACTCAATGACTGCATATTGTCAAGTTTATGGATGTAACAAGGATCTTAGTTCTTGTAAGGACTACCATAAGAGGCATAAAGTTTGTGAGGTTCACTCCAAGACTCCTATAGTCATTGTGAATGGAATTGAGCAGAGGTTTTGTCAACAATGTAGCAGGTTTCATTTGCTGTCTGAGTTTGATGATGGTAAGCGCAGTTGCCGTAAACGACTTGCAGGCCATAATGAGCGTCGAAGAAAACCACAAGGCGTTCACTCTACAAATTCTGGGAGACTGTTTCAGCCATTTGGTGATATCAGATTCCAGGGAACCAAGCCACCAGCAGCATCTTTTCTCTATCCAGAGGTCTTCCAAAGTGGTTTCTGGAGACCTATGAAAGCAGAACATGAAGCTGGCTTTAGGCATTTTTCTTCTGTGCCTGTCACCAATGGACATCTTCAATCAAGATCTCCGTTTCCTTCGTACAACGAAAAACAATTTCCCTTTCTTCATGAAAATGTTGCCACATCCACTACAGGCAGTAAGTTCAGTGAAAACAATAGCCATTATGCTCATGCCATTGGCTACACCTCCTTAGGAAGCGAAGACTTCAATGTTTTTCATACCGCACCAAGCATTCAAGGATTATCAGGAATTTCAGACTCTTGTGCTCTCTCTCGTCTGTCATCTCAGTCCAATAACACTTCAAGCCAGTCCTTGGAAATTCCCTTTGATAACCCTTTGGTTATTCCAAGCAGCCATAGCCATGTCTACAGCATAAGATCACAAGCGACTTCCTCAAGCCGAGTGTCTGATAGACTTTTATCCGAATTAAATCCTACAGATGGAAGTCATCTCAGTCCTATATTGGTACCAGACAATAATGATATCGTGAACTTTGAAATGGAAGACGGGATCTTCCATGATTCAGATTTTGTGAATGTGAAAGACTGCCTTTCTTGTGAAGATGATGCAACCATCGATTTACTACAACTGTCGTCGCAGCTTCAACGAGTTGAGCATCATAGACAATCATTGCAGGTGAAGAAAGAGTTTGATTCTTCTTGCACTCTCCGGATTACTTAA
Protein sequence

>Msa1300180

MESWSYISEEKGSEELGFCEMFGKQYSDDFNFIGSVPSKKLDGKFDDPSEFSVKGDTNFKLSNSVVESNGWDSLIDLKLGRFDDHGNASIDAAFSKGAAPILSSCESSTPPKRVRVHSMTAYCQVYGCNKDLSSCKDYHKRHKVCEVHSKTPIVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKRLAGHNERRRKPQGVHSTNSGRLFQPFGDIRFQGTKPPAASFLYPEVFQSGFWRPMKAEHEAGFRHFSSVPVTNGHLQSRSPFPSYNEKQFPFLHENVATSTTGSKFSENNSHYAHAIGYTSLGSEDFNVFHTAPSIQGLSGISDSCALSRLSSQSNNTSSQSLEIPFDNPLVIPSSHSHVYSIRSQATSSSRVSDRLLSELNPTDGSHLSPILVPDNNDIVNFEMEDGIFHDSDFVNVKDCLSCEDDATIDLLQLSSQLQRVEHHRQSLQVKKEFDSSCTLRIT*