Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1301440 | XP_003609474.1 | 94.340 | 530 | 27 | 2 | 1 | 528 | 1 | 529 | 0.0 | 1007 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1301440 | sp|Q9FZP1|HPSE3_ARATH | 59.707 | 546 | 192 | 6 | 1 | 528 | 1 | 536 | 0.0 | 678 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1301440 | G7JGL1 | 94.340 | 530 | 27 | 2 | 1 | 528 | 1 | 529 | 0.0 | 1007 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1301440 | Msa1448390 | 0.800311 | 1.529688e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1301440 | MtrunA17_Chr4g0064851 | 94.340 | 530 | 27 | 2 | 1 | 528 | 1 | 529 | 0.0 | 1007 |
| Msa1301440 | MtrunA17_Chr2g0304251 | 66.034 | 527 | 163 | 4 | 15 | 527 | 12 | 536 | 0.0 | 713 |
| Msa1301440 | MtrunA17_Chr3g0086271 | 49.023 | 512 | 253 | 5 | 21 | 528 | 8 | 515 | 5.91e-173 | 498 |
| Msa1301440 | MtrunA17_Chr3g0086291 | 50.302 | 497 | 236 | 6 | 39 | 528 | 25 | 517 | 2.11e-172 | 497 |
| Msa1301440 | MtrunA17_Chr3g0086241 | 47.706 | 545 | 253 | 9 | 14 | 528 | 1 | 543 | 3.06e-172 | 497 |
| Msa1301440 | MtrunA17_Chr4g0061271 | 48.069 | 518 | 240 | 5 | 39 | 527 | 25 | 542 | 3.26e-166 | 482 |
| Msa1301440 | MtrunA17_Chr3g0086251 | 48.362 | 519 | 259 | 7 | 14 | 528 | 111 | 624 | 4.04e-165 | 482 |
| Msa1301440 | MtrunA17_Chr5g0418671 | 45.769 | 520 | 257 | 5 | 11 | 527 | 6 | 503 | 7.36e-163 | 472 |
| Msa1301440 | MtrunA17_Chr4g0064821 | 67.544 | 228 | 60 | 3 | 168 | 395 | 3 | 216 | 1.47e-103 | 310 |
| Msa1301440 | MtrunA17_Chr4g0064811 | 74.257 | 101 | 25 | 1 | 428 | 528 | 1 | 100 | 1.11e-43 | 150 |
| Msa1301440 | MtrunA17_Chr8g0383141 | 69.697 | 99 | 17 | 2 | 406 | 499 | 10 | 100 | 6.55e-38 | 135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1301440 | AT5G34940.2 | 59.707 | 546 | 192 | 6 | 1 | 528 | 1 | 536 | 0.0 | 678 |
| Msa1301440 | AT5G34940.1 | 60.848 | 401 | 141 | 2 | 144 | 528 | 1 | 401 | 0.0 | 515 |
| Msa1301440 | AT5G61250.3 | 46.887 | 514 | 250 | 3 | 38 | 528 | 26 | 539 | 1.14e-173 | 501 |
| Msa1301440 | AT5G61250.1 | 46.887 | 514 | 250 | 3 | 38 | 528 | 26 | 539 | 1.14e-173 | 501 |
| Msa1301440 | AT5G61250.2 | 46.887 | 514 | 250 | 3 | 38 | 528 | 26 | 539 | 1.14e-173 | 501 |
| Msa1301440 | AT5G34940.3 | 63.585 | 357 | 128 | 1 | 35 | 389 | 25 | 381 | 1.47e-173 | 494 |
| Msa1301440 | AT5G07830.1 | 47.379 | 515 | 247 | 4 | 38 | 528 | 29 | 543 | 6.13e-171 | 494 |
| Msa1301440 | AT5G34940.4 | 59.732 | 298 | 104 | 2 | 247 | 528 | 2 | 299 | 1.47e-127 | 374 |
Find 146 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAATACTGTTTCTCAATT+TGG | 0.117308 | 8_3:-63452526 | Msa1301440:CDS |
| TTCAGGGTTAATGTTATATT+TGG | 0.120242 | 8_3:-63454121 | Msa1301440:intron |
| CTTTGAGGCAAATTGGTTTA+AGG | 0.149506 | 8_3:-63453552 | Msa1301440:CDS |
| AATCAAAGTTAAGATCTTTA+TGG | 0.167612 | 8_3:+63455049 | None:intergenic |
| TGGTTTCTTGGCAAAATTTA+AGG | 0.174708 | 8_3:+63452473 | None:intergenic |
| TTCCATCCTTTGCTGTTAAA+TGG | 0.200876 | 8_3:+63452412 | None:intergenic |
| TGAAATTGACTTGAGCATTA+TGG | 0.213019 | 8_3:+63451954 | None:intergenic |
| CTCAATCCATCCTCTCTTAA+TGG | 0.220707 | 8_3:-63453346 | Msa1301440:CDS |
| GAAAGAGGCCTAACTGTTAT+TGG | 0.228064 | 8_3:+63452288 | None:intergenic |
| TGGTGAAGCAGGAGGGGCTT+GGG | 0.229421 | 8_3:-63453254 | Msa1301440:CDS |
| TCACATCAAATACAGGTATT+TGG | 0.232373 | 8_3:-63453114 | Msa1301440:intron |
| AGTACTATTGTTAGATTGTT+TGG | 0.255610 | 8_3:-63452131 | Msa1301440:three_prime_UTR |
| TTGGTGAAGCAGGAGGGGCT+TGG | 0.260328 | 8_3:-63453255 | Msa1301440:CDS |
| TATATTGCTGGCAAAGTATT+TGG | 0.274869 | 8_3:+63455239 | None:intergenic |
| TTTCTTACAGTGCTCTTCTT+TGG | 0.278856 | 8_3:-63452765 | Msa1301440:intron |
| AGCCAAACTATGGTACTAAA+TGG | 0.279353 | 8_3:-63452381 | Msa1301440:CDS |
| GGTGCAATGATTAGTGGTTT+TGG | 0.286816 | 8_3:+63453584 | None:intergenic |
| TGCCAAATCCAGATTATTAT+AGG | 0.288593 | 8_3:-63452995 | Msa1301440:intron |
| TCATGCTTCTCTTCTTAATC+TGG | 0.289299 | 8_3:-63454785 | Msa1301440:intron |
| TTGAAAGAAAATGTTAAGTT+TGG | 0.289585 | 8_3:-63454356 | Msa1301440:CDS |
| ATTATGAGTGGATGGTTTCT+TGG | 0.311113 | 8_3:+63452461 | None:intergenic |
| GAGGCTTCTTTGAGGCAAAT+TGG | 0.311182 | 8_3:-63453559 | Msa1301440:CDS |
| ATGCATTTGTCAACAGCTTT+TGG | 0.315595 | 8_3:-63453207 | Msa1301440:intron |
| ACTATTCATGGTTGGGAATT+CGG | 0.318990 | 8_3:-63453989 | Msa1301440:intron |
| GATCTTCTTTGTTCCATAGA+AGG | 0.319416 | 8_3:+63452708 | None:intergenic |
| TACCTATAATAATCTGGATT+TGG | 0.319672 | 8_3:+63452993 | None:intergenic |
| GGTGAAGCAGGAGGGGCTTG+GGG | 0.333846 | 8_3:-63453253 | Msa1301440:CDS |
| TTTGAAGAATCAACATATAT+AGG | 0.336227 | 8_3:+63452312 | None:intergenic |
| GTCCTGTCAGCTACCTTCTA+TGG | 0.336646 | 8_3:-63452721 | Msa1301440:CDS |
| TTCACCCTTGAAAATTAGAT+TGG | 0.343603 | 8_3:-63454447 | Msa1301440:CDS |
| AGCTTCAGTTTCAGCTTCAT+TGG | 0.343969 | 8_3:-63454964 | Msa1301440:CDS |
| GCAAAGAAGTACACTATTCA+TGG | 0.348432 | 8_3:-63454001 | Msa1301440:CDS |
| GCAGGAGGGGCTTGGGGCAG+TGG | 0.351792 | 8_3:-63453247 | Msa1301440:CDS |
| TTCCATTTAGTACCATAGTT+TGG | 0.352865 | 8_3:+63452379 | None:intergenic |
| TTGGGGCAGTGGTCATCATC+TGG | 0.364348 | 8_3:-63453236 | Msa1301440:CDS |
| TTTGGATTAAATGCTCTTGC+TGG | 0.367787 | 8_3:-63454103 | Msa1301440:CDS |
| GGAGTGAATTGCATAGGATT+AGG | 0.368336 | 8_3:-63454943 | Msa1301440:CDS |
| CAGTTTCATGTGTATATTGC+TGG | 0.369402 | 8_3:+63455227 | None:intergenic |
| CTTGGCATGTCAGCTACTTA+TGG | 0.369847 | 8_3:-63453086 | Msa1301440:CDS |
| GCAAAACCAATCAAAATCCT+AGG | 0.406941 | 8_3:+63452098 | None:intergenic |
| TCTTCTTTGGCACCGACTCA+TGG | 0.408072 | 8_3:-63452752 | Msa1301440:CDS |
| TTGCAAGATAAAGTCACATA+TGG | 0.412733 | 8_3:-63454416 | Msa1301440:CDS |
| CTTCAAAGCCAATAACAGTT+AGG | 0.413217 | 8_3:-63452296 | Msa1301440:CDS |
| TAAGGAATTCTTAAACAAAT+CGG | 0.416402 | 8_3:-63453534 | Msa1301440:CDS |
| CCTCCAGGTGCAATGATTAG+TGG | 0.427861 | 8_3:+63453578 | None:intergenic |
| ACTTTGATAGGAGGAAACTA+TGG | 0.437840 | 8_3:-63453041 | Msa1301440:CDS |
| AAAGGGGTTGTTGTAATTCA+TGG | 0.447039 | 8_3:-63454904 | Msa1301440:CDS |
| CAAGCATGGGTTGGTGAAGC+AGG | 0.449167 | 8_3:-63453265 | Msa1301440:CDS |
| CAAGCTTTAACAGCAGCATC+TGG | 0.449403 | 8_3:+63452246 | None:intergenic |
| GAATTGTGTGGAGCTGGAAC+TGG | 0.449638 | 8_3:-63453689 | Msa1301440:CDS |
| AGAGTTCTGCTGTTGGACCT+TGG | 0.450053 | 8_3:-63454063 | Msa1301440:CDS |
| AAATTTACATAGCCAAACTA+TGG | 0.453369 | 8_3:-63452391 | Msa1301440:CDS |
| GGCAAAATTTAAGGCCACTC+TGG | 0.454518 | 8_3:+63452482 | None:intergenic |
| TTGCAGCTAGCTTAGCTCAA+TGG | 0.455259 | 8_3:-63452226 | Msa1301440:exon |
| ACCCACCACATTTATAACCT+TGG | 0.456246 | 8_3:-63453491 | Msa1301440:CDS |
| CTTACATACAGGAGGTGATC+CGG | 0.457971 | 8_3:-63453386 | Msa1301440:intron |
| AAGGTCCAACAGCAGAACTC+TGG | 0.458755 | 8_3:+63454065 | None:intergenic |
| TGCACCTGGAGGCTTCTTTG+AGG | 0.459194 | 8_3:-63453567 | Msa1301440:CDS |
| CACTAGGCTAAACCGAAAAT+CGG | 0.461119 | 8_3:-63452203 | Msa1301440:three_prime_UTR |
| AGCTCATCCCATCTTTGCAT+TGG | 0.461356 | 8_3:+63454314 | None:intergenic |
| AATGAACTGAATAGTGCATT+GGG | 0.465084 | 8_3:+63452070 | None:intergenic |
| GTTAAGTTTGGTTTCACTCA+AGG | 0.468571 | 8_3:-63454344 | Msa1301440:CDS |
| TTGTTTGTGCAACTATTGAT+TGG | 0.469018 | 8_3:-63454849 | Msa1301440:CDS |
| GAAATGATTCAGCTGTGAAA+GGG | 0.471866 | 8_3:-63454921 | Msa1301440:CDS |
| GGTGCTTACCAATGCAAAGA+TGG | 0.475234 | 8_3:-63454322 | Msa1301440:CDS |
| GAAGTACACTATTCATGGTT+GGG | 0.476144 | 8_3:-63453996 | Msa1301440:CDS |
| GAATCCCAGAGTTCTGCTGT+TGG | 0.478372 | 8_3:-63454070 | Msa1301440:CDS |
| TCACCCTTGAAAATTAGATT+GGG | 0.483289 | 8_3:-63454446 | Msa1301440:CDS |
| TACTGCAGACAGACTTTGAT+AGG | 0.485428 | 8_3:-63453053 | Msa1301440:CDS |
| TTCAAAACAAATGGAGTACA+AGG | 0.488925 | 8_3:+63454374 | None:intergenic |
| TAATGAACTGAATAGTGCAT+TGG | 0.488937 | 8_3:+63452069 | None:intergenic |
| TGACTGGGGAAGATGCAGTT+GGG | 0.489900 | 8_3:-63454809 | Msa1301440:CDS |
| AACCGAAAATCGGTTTCCCT+TGG | 0.491824 | 8_3:-63452193 | Msa1301440:three_prime_UTR |
| CTTCTTTGGCACCGACTCAT+GGG | 0.495122 | 8_3:-63452751 | Msa1301440:CDS |
| CCCTTGAAAATTAGATTGGG+TGG | 0.504477 | 8_3:-63454443 | Msa1301440:CDS |
| GACATTCAGTTTCTTGCCTT+AGG | 0.513469 | 8_3:-63452013 | Msa1301440:three_prime_UTR |
| AGAATTCTTTCAACTAAGCC+CGG | 0.517400 | 8_3:+63453367 | None:intergenic |
| AGAAGTACACTATTCATGGT+TGG | 0.520437 | 8_3:-63453997 | Msa1301440:CDS |
| CCCCAGTCACATTTCTGAGG+TGG | 0.522444 | 8_3:+63454823 | None:intergenic |
| TTACATACAGGAGGTGATCC+GGG | 0.524148 | 8_3:-63453385 | Msa1301440:intron |
| CACATTTATAACCTTGGACC+AGG | 0.527860 | 8_3:-63453485 | Msa1301440:intron |
| CAAGAACCTCAGCTCAAGCA+TGG | 0.529412 | 8_3:-63453279 | Msa1301440:CDS |
| GGTAATGAATTGTGTGGAGC+TGG | 0.529444 | 8_3:-63453695 | Msa1301440:CDS |
| TCTCCCACATTATGAGTGGA+TGG | 0.529610 | 8_3:+63452453 | None:intergenic |
| ATATGTGACTTTATCTTGCA+AGG | 0.529864 | 8_3:+63454418 | None:intergenic |
| TTACTCTGCTGTAGTAGCAG+AGG | 0.530971 | 8_3:+63455128 | None:intergenic |
| TACAGGTATTTGGATCAGCT+TGG | 0.531719 | 8_3:-63453104 | Msa1301440:intron |
| TTTGTGCAACTATTGATTGG+TGG | 0.534149 | 8_3:-63454846 | Msa1301440:CDS |
| GGAAATGATTCAGCTGTGAA+AGG | 0.534369 | 8_3:-63454922 | Msa1301440:CDS |
| TTAAGTTTGGTTTCACTCAA+GGG | 0.534562 | 8_3:-63454343 | Msa1301440:CDS |
| GCCACTCCATTAAGAGAGGA+TGG | 0.540608 | 8_3:+63453340 | None:intergenic |
| AGGTCCAACAGCAGAACTCT+GGG | 0.540823 | 8_3:+63454066 | None:intergenic |
| GCATGGGTTGGTGAAGCAGG+AGG | 0.541025 | 8_3:-63453262 | Msa1301440:CDS |
| CATGGGTTGGTGAAGCAGGA+GGG | 0.543776 | 8_3:-63453261 | Msa1301440:CDS |
| TTCCATAGAAGGTAGCTGAC+AGG | 0.546554 | 8_3:+63452719 | None:intergenic |
| CAAAACCAATCAAAATCCTA+GGG | 0.547371 | 8_3:+63452099 | None:intergenic |
| CTATTGTTAGATTGTTTGGA+GGG | 0.548749 | 8_3:-63452127 | Msa1301440:three_prime_UTR |
| TGTTTGGAGGGCGAAGCCCT+AGG | 0.554563 | 8_3:-63452115 | Msa1301440:three_prime_UTR |
| TTCATTGGAGTGAATTGCAT+AGG | 0.557031 | 8_3:-63454949 | Msa1301440:CDS |
| AGAAAACGACTCACTACCTA+AGG | 0.557890 | 8_3:+63451997 | None:intergenic |
| GTTGGAACATACCTGGTCCA+AGG | 0.558530 | 8_3:+63453474 | None:intergenic |
| ACTATTGTTAGATTGTTTGG+AGG | 0.559993 | 8_3:-63452128 | Msa1301440:three_prime_UTR |
| ATTCTAAGTGTAGATTCAGC+TGG | 0.564761 | 8_3:-63452354 | Msa1301440:CDS |
| GTGGTGGGTGACCACATTTG+TGG | 0.567042 | 8_3:+63453505 | None:intergenic |
| TGCAAGATAAAGTCACATAT+GGG | 0.568227 | 8_3:-63454415 | Msa1301440:CDS |
| TACCATTTAACAGCAAAGGA+TGG | 0.568356 | 8_3:-63452414 | Msa1301440:CDS |
| TAGCTTAGCTCAATGGCACT+AGG | 0.569559 | 8_3:-63452219 | Msa1301440:three_prime_UTR |
| GTGACTGGGGAAGATGCAGT+TGG | 0.570547 | 8_3:-63454810 | Msa1301440:CDS |
| ACCTCAGCTCAAGCATGGGT+TGG | 0.570704 | 8_3:-63453274 | Msa1301440:CDS |
| GAAACCATCCACTCATAATG+TGG | 0.570906 | 8_3:-63452457 | Msa1301440:CDS |
| CTTCCCCAGTCACATTTCTG+AGG | 0.574209 | 8_3:+63454820 | None:intergenic |
| TTTGCCTCAAAGAAGCCTCC+AGG | 0.578642 | 8_3:+63453563 | None:intergenic |
| GTGCTTACCAATGCAAAGAT+GGG | 0.579091 | 8_3:-63454321 | Msa1301440:CDS |
| ACCAACCCATGCTTGAGCTG+AGG | 0.583418 | 8_3:+63453273 | None:intergenic |
| AGAGTACCATTTAACAGCAA+AGG | 0.585879 | 8_3:-63452418 | Msa1301440:CDS |
| GCCACCTCAGAAATGTGACT+GGG | 0.585883 | 8_3:-63454824 | Msa1301440:CDS |
| GGCCACTCTGGCTTGAACAG+TGG | 0.589150 | 8_3:+63452494 | None:intergenic |
| ATGGGTTGGTGAAGCAGGAG+GGG | 0.589189 | 8_3:-63453260 | Msa1301440:CDS |
| TGATTCTCCCACATTATGAG+TGG | 0.591100 | 8_3:+63452449 | None:intergenic |
| GGCCACCTCAGAAATGTGAC+TGG | 0.592338 | 8_3:-63454825 | Msa1301440:CDS |
| TCCATCCTCTCTTAATGGAG+TGG | 0.595996 | 8_3:-63453341 | Msa1301440:CDS |
| AAGAACCTCAGCTCAAGCAT+GGG | 0.599111 | 8_3:-63453278 | Msa1301440:CDS |
| GTCCAAGGTTATAAATGTGG+TGG | 0.600899 | 8_3:+63453489 | None:intergenic |
| TAGTTCAGGATGTATATCGA+AGG | 0.605511 | 8_3:-63453613 | Msa1301440:CDS |
| CTTTGGCACCGACTCATGGG+AGG | 0.606750 | 8_3:-63452748 | Msa1301440:CDS |
| CTGGTCCAAGGTTATAAATG+TGG | 0.608301 | 8_3:+63453486 | None:intergenic |
| AACTTATGCACATTGTGCAA+AGG | 0.615463 | 8_3:-63452683 | Msa1301440:CDS |
| AAACCATCCACTCATAATGT+GGG | 0.621064 | 8_3:-63452456 | Msa1301440:CDS |
| AAACCACTAATCATTGCACC+TGG | 0.631010 | 8_3:-63453581 | Msa1301440:CDS |
| GACTGGGGAAGATGCAGTTG+GGG | 0.631756 | 8_3:-63454808 | Msa1301440:CDS |
| GTCAGCCACTCCATTAAGAG+AGG | 0.631825 | 8_3:+63453336 | None:intergenic |
| AAATGATTCAGCTGTGAAAG+GGG | 0.633658 | 8_3:-63454920 | Msa1301440:CDS |
| AGTTCAGGATGTATATCGAA+GGG | 0.634117 | 8_3:-63453612 | Msa1301440:CDS |
| TGGATTTGGCATGAAAGTAG+TGG | 0.636768 | 8_3:+63453007 | None:intergenic |
| TCGGCATTAGTGTAGTTCCA+AGG | 0.645458 | 8_3:+63454046 | None:intergenic |
| ATCGGACGAATCCACAAATG+TGG | 0.653324 | 8_3:-63453516 | Msa1301440:CDS |
| TGCAGACAGACTTTGATAGG+AGG | 0.655417 | 8_3:-63453050 | Msa1301440:CDS |
| CACCACTGTTCAAGCCAGAG+TGG | 0.656315 | 8_3:-63452496 | Msa1301440:CDS |
| AGTATAACGTATAAAAGACT+CGG | 0.661223 | 8_3:+63454027 | None:intergenic |
| GGAAGTTGTTACAAGTACAA+TGG | 0.661737 | 8_3:+63455185 | None:intergenic |
| TGGACAGGTAATGAATTGTG+TGG | 0.666362 | 8_3:-63453701 | Msa1301440:intron |
| GGACACGTCCTCCCATGAGT+CGG | 0.680945 | 8_3:+63452740 | None:intergenic |
| CCACTAATCATTGCACCTGG+AGG | 0.683993 | 8_3:-63453578 | Msa1301440:CDS |
| TCCAAGGTTATAAATGTGGT+GGG | 0.685319 | 8_3:+63453490 | None:intergenic |
| ACATATATAGGATTCAGTGA+AGG | 0.688369 | 8_3:+63452324 | None:intergenic |
| CCACCTCAGAAATGTGACTG+GGG | 0.716848 | 8_3:-63454823 | Msa1301440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAATGTTTCATTTA+TGG | - | chr8_3:63452484-63452503 | Msa1301440:CDS | 10.0% |
| !! | TTATTATGAAAATAAATAAC+AGG | + | chr8_3:63452662-63452681 | None:intergenic | 10.0% |
| !!! | TTTATGGTTTTTTCATAAAT+GGG | + | chr8_3:63452138-63452157 | None:intergenic | 15.0% |
| !!! | ATTTTGTTAAATGCAATAAA+AGG | - | chr8_3:63452618-63452637 | Msa1301440:intron | 15.0% |
| !!! | TATATATTTGCAGTTATTTT+TGG | - | chr8_3:63453438-63453457 | Msa1301440:intron | 15.0% |
| !! | CAATTAATATTCAACTAATT+CGG | - | chr8_3:63454274-63454293 | Msa1301440:intron | 15.0% |
| !!! | CTTTATGGTTTTTTCATAAA+TGG | + | chr8_3:63452139-63452158 | None:intergenic | 20.0% |
| !! | AATCAAAGTTAAGATCTTTA+TGG | + | chr8_3:63452154-63452173 | None:intergenic | 20.0% |
| !!! | TCTTAACTTTGATTGATTTT+AGG | - | chr8_3:63452160-63452179 | Msa1301440:three_prime_UTR | 20.0% |
| !!! | TTTGATTGATTTTAGGAAAT+GGG | - | chr8_3:63452167-63452186 | Msa1301440:three_prime_UTR | 20.0% |
| !!! | TTAACAAAATTTTGTTGTTG+AGG | + | chr8_3:63452608-63452627 | None:intergenic | 20.0% |
| !!! | ACATTTTCTTTCAAAACAAA+TGG | + | chr8_3:63452838-63452857 | None:intergenic | 20.0% |
| !! | TTGAAAGAAAATGTTAAGTT+TGG | - | chr8_3:63452844-63452863 | Msa1301440:intron | 20.0% |
| !!! | TGTTTTTTGATAACTCTAAA+GGG | + | chr8_3:63452954-63452973 | None:intergenic | 20.0% |
| !!! | TTGTTTTTTGATAACTCTAA+AGG | + | chr8_3:63452955-63452974 | None:intergenic | 20.0% |
| !!! | CAGATTCAACTTTTATAATT+TGG | - | chr8_3:63453013-63453032 | Msa1301440:CDS | 20.0% |
| !! | TTAGACTGAAAATCAAAAAA+TGG | - | chr8_3:63453279-63453298 | Msa1301440:CDS | 20.0% |
| !!! | AAATTTAATTTGTTGACCAA+TGG | + | chr8_3:63453379-63453398 | None:intergenic | 20.0% |
| !!! | TTTTTGGTTAAAAGGAAAAT+AGG | - | chr8_3:63453454-63453473 | Msa1301440:intron | 20.0% |
| !! | TAAGGAATTCTTAAACAAAT+CGG | - | chr8_3:63453666-63453685 | Msa1301440:CDS | 20.0% |
| !! | TAATCAAATTCGTGAAAATT+GGG | + | chr8_3:63453781-63453800 | None:intergenic | 20.0% |
| !! | ATAATCAAATTCGTGAAAAT+TGG | + | chr8_3:63453782-63453801 | None:intergenic | 20.0% |
| !!! | AACTTTGAAGTACATTTTTA+AGG | + | chr8_3:63453901-63453920 | None:intergenic | 20.0% |
| !!! | TTTTAGTACCTATAATAATC+TGG | + | chr8_3:63454216-63454235 | None:intergenic | 20.0% |
| !! | ACTTATGAATTTACTTCAAA+CGG | + | chr8_3:63454374-63454393 | None:intergenic | 20.0% |
| !! | TTTGAAGAATCAACATATAT+AGG | + | chr8_3:63454891-63454910 | None:intergenic | 20.0% |
| ! | ATGACAAAAACTTTGTAACA+AGG | + | chr8_3:63452039-63452058 | None:intergenic | 25.0% |
| ! | AACTATAAAAAAAACAGTCG+AGG | + | chr8_3:63452103-63452122 | None:intergenic | 25.0% |
| !!! | CGACTGTTTTTTTTATAGTT+TGG | - | chr8_3:63452103-63452122 | Msa1301440:three_prime_UTR | 25.0% |
| !!! | CTTTGATTGATTTTAGGAAA+TGG | - | chr8_3:63452166-63452185 | Msa1301440:three_prime_UTR | 25.0% |
| !!! | TATGTTTTTTTGGATGTACT+TGG | - | chr8_3:63452211-63452230 | Msa1301440:three_prime_UTR | 25.0% |
| ! | TGTAAATTATCTCTTTCACT+AGG | + | chr8_3:63452559-63452578 | None:intergenic | 25.0% |
| !!! | TTATGATTTTAATCTCATGC+AGG | - | chr8_3:63452581-63452600 | Msa1301440:intron | 25.0% |
| ! | TGAAGTTTACCATTAATCAA+TGG | - | chr8_3:63453047-63453066 | Msa1301440:CDS | 25.0% |
| !! | ATATACCTACCATTGATTAA+TGG | + | chr8_3:63453059-63453078 | None:intergenic | 25.0% |
| ! | TTCAGGGTTAATGTTATATT+TGG | - | chr8_3:63453079-63453098 | Msa1301440:CDS | 25.0% |
| ! | AGTATAACGTATAAAAGACT+CGG | + | chr8_3:63453176-63453195 | None:intergenic | 25.0% |
| !! | TACATTGACATTTTTAACGA+AGG | + | chr8_3:63453250-63453269 | None:intergenic | 25.0% |
| ! | CGTTAAAAATGTCAATGTAT+TGG | - | chr8_3:63453251-63453270 | Msa1301440:CDS | 25.0% |
| !! | TTGAAATTGATAATAGCCAT+TGG | - | chr8_3:63453360-63453379 | Msa1301440:CDS | 25.0% |
| !!! | TGCAGTTATTTTTGGTTAAA+AGG | - | chr8_3:63453446-63453465 | Msa1301440:intron | 25.0% |
| ! | AAAGGAAAATAGGAATTACA+AGG | - | chr8_3:63453464-63453483 | Msa1301440:intron | 25.0% |
| !!! | TTACAAGGAGCTTTTTTTAT+TGG | - | chr8_3:63453479-63453498 | Msa1301440:intron | 25.0% |
| !!! | TGTTTTAAGAAAGATAGTTC+AGG | - | chr8_3:63453573-63453592 | Msa1301440:CDS | 25.0% |
| !!! | AAATTCTTATGCTGTTTTGT+TGG | + | chr8_3:63453747-63453766 | None:intergenic | 25.0% |
| ! | TACCTATAATAATCTGGATT+TGG | + | chr8_3:63454210-63454229 | None:intergenic | 25.0% |
| !!! | AAAGGTCCTATTTTGAATTT+AGG | - | chr8_3:63454345-63454364 | Msa1301440:CDS | 25.0% |
| !!! | AAGGTCCTATTTTGAATTTA+GGG | - | chr8_3:63454346-63454365 | Msa1301440:CDS | 25.0% |
| ! | CTTATGAATTTACTTCAAAC+GGG | + | chr8_3:63454373-63454392 | None:intergenic | 25.0% |
| !!! | TGCTATTTTGTGACATTAAT+AGG | - | chr8_3:63454399-63454418 | Msa1301440:CDS | 25.0% |
| !!! | GCTATTTTGTGACATTAATA+GGG | - | chr8_3:63454400-63454419 | Msa1301440:CDS | 25.0% |
| ! | AAATTTACATAGCCAAACTA+TGG | - | chr8_3:63454809-63454828 | Msa1301440:CDS | 25.0% |
| !! | ATTTTCTTATCAATCACCAA+GGG | + | chr8_3:63455026-63455045 | None:intergenic | 25.0% |
| !! | AATTTTCTTATCAATCACCA+AGG | + | chr8_3:63455027-63455046 | None:intergenic | 25.0% |
| ! | AGTACTATTGTTAGATTGTT+TGG | - | chr8_3:63455069-63455088 | Msa1301440:five_prime_UTR | 25.0% |
| TACATCCAAAAAAACATACC+CGG | + | chr8_3:63452209-63452228 | None:intergenic | 30.0% | |
| ! | ATTCATGGCAAAGCTTTTAT+TGG | - | chr8_3:63452311-63452330 | Msa1301440:CDS | 30.0% |
| TTGTTTGTGCAACTATTGAT+TGG | - | chr8_3:63452351-63452370 | Msa1301440:CDS | 30.0% | |
| !! | TCTAATTTTCAAGGGTGAAA+AGG | + | chr8_3:63452752-63452771 | None:intergenic | 30.0% |
| TTCACCCTTGAAAATTAGAT+TGG | - | chr8_3:63452753-63452772 | Msa1301440:CDS | 30.0% | |
| TCACCCTTGAAAATTAGATT+GGG | - | chr8_3:63452754-63452773 | Msa1301440:CDS | 30.0% | |
| ATATGTGACTTTATCTTGCA+AGG | + | chr8_3:63452785-63452804 | None:intergenic | 30.0% | |
| TTGCAAGATAAAGTCACATA+TGG | - | chr8_3:63452784-63452803 | Msa1301440:intron | 30.0% | |
| TGCAAGATAAAGTCACATAT+GGG | - | chr8_3:63452785-63452804 | Msa1301440:intron | 30.0% | |
| TTCAAAACAAATGGAGTACA+AGG | + | chr8_3:63452829-63452848 | None:intergenic | 30.0% | |
| ! | TTAAGTTTGGTTTCACTCAA+GGG | - | chr8_3:63452857-63452876 | Msa1301440:intron | 30.0% |
| !!! | TGATTTTTTACCCTGCTTTT+TGG | + | chr8_3:63452924-63452943 | None:intergenic | 30.0% |
| GTTTACCATTAATCAATGGT+AGG | - | chr8_3:63453051-63453070 | Msa1301440:CDS | 30.0% | |
| ATCAATGGTAGGTATATTTC+AGG | - | chr8_3:63453062-63453081 | Msa1301440:CDS | 30.0% | |
| TCAATGGTAGGTATATTTCA+GGG | - | chr8_3:63453063-63453082 | Msa1301440:CDS | 30.0% | |
| ! | ATCAATTTCAAGTGAACTCA+TGG | + | chr8_3:63453351-63453370 | None:intergenic | 30.0% |
| ACTGATATTCCGAAAAATCA+CGG | + | chr8_3:63454032-63454051 | None:intergenic | 30.0% | |
| ! | TGATTATCAGATAAAGCGTT+GGG | + | chr8_3:63454069-63454088 | None:intergenic | 30.0% |
| CTGATAATCACATCAAATAC+AGG | - | chr8_3:63454079-63454098 | Msa1301440:CDS | 30.0% | |
| TCACATCAAATACAGGTATT+TGG | - | chr8_3:63454086-63454105 | Msa1301440:CDS | 30.0% | |
| TGCCAAATCCAGATTATTAT+AGG | - | chr8_3:63454205-63454224 | Msa1301440:intron | 30.0% | |
| ! | CACAATACTGTTTCTCAATT+TGG | - | chr8_3:63454674-63454693 | Msa1301440:intron | 30.0% |
| TGGTTTCTTGGCAAAATTTA+AGG | + | chr8_3:63454730-63454749 | None:intergenic | 30.0% | |
| TTCCATTTAGTACCATAGTT+TGG | + | chr8_3:63454824-63454843 | None:intergenic | 30.0% | |
| ACATATATAGGATTCAGTGA+AGG | + | chr8_3:63454879-63454898 | None:intergenic | 30.0% | |
| TGAGCAAAAACAATAGAAAG+AGG | + | chr8_3:63454930-63454949 | None:intergenic | 30.0% | |
| ACTATTGTTAGATTGTTTGG+AGG | - | chr8_3:63455072-63455091 | Msa1301440:five_prime_UTR | 30.0% | |
| CTATTGTTAGATTGTTTGGA+GGG | - | chr8_3:63455073-63455092 | Msa1301440:five_prime_UTR | 30.0% | |
| CAAAACCAATCAAAATCCTA+GGG | + | chr8_3:63455104-63455123 | None:intergenic | 30.0% | |
| AATGAACTGAATAGTGCATT+GGG | + | chr8_3:63455133-63455152 | None:intergenic | 30.0% | |
| TAATGAACTGAATAGTGCAT+TGG | + | chr8_3:63455134-63455153 | None:intergenic | 30.0% | |
| CAGTTTCATGTGTATATTGC+TGG | + | chr8_3:63451976-63451995 | None:intergenic | 35.0% | |
| GGAAGTTGTTACAAGTACAA+TGG | + | chr8_3:63452018-63452037 | None:intergenic | 35.0% | |
| GGGTTATCAAAAAAAGCTTC+CGG | - | chr8_3:63452187-63452206 | Msa1301440:three_prime_UTR | 35.0% | |
| GGTTATCAAAAAAAGCTTCC+GGG | - | chr8_3:63452188-63452207 | Msa1301440:three_prime_UTR | 35.0% | |
| TTCATTGGAGTGAATTGCAT+AGG | - | chr8_3:63452251-63452270 | Msa1301440:CDS | 35.0% | |
| GAAATGATTCAGCTGTGAAA+GGG | - | chr8_3:63452279-63452298 | Msa1301440:CDS | 35.0% | |
| AAATGATTCAGCTGTGAAAG+GGG | - | chr8_3:63452280-63452299 | Msa1301440:CDS | 35.0% | |
| AAAGGGGTTGTTGTAATTCA+TGG | - | chr8_3:63452296-63452315 | Msa1301440:CDS | 35.0% | |
| ! | ATGGCAAAGCTTTTATTGGA+AGG | - | chr8_3:63452315-63452334 | Msa1301440:CDS | 35.0% |
| ! | TTTGTGCAACTATTGATTGG+TGG | - | chr8_3:63452354-63452373 | Msa1301440:CDS | 35.0% |
| TCATGCTTCTCTTCTTAATC+TGG | - | chr8_3:63452415-63452434 | Msa1301440:CDS | 35.0% | |
| AAAGGCTGCAAAACATTCAA+AGG | + | chr8_3:63452734-63452753 | None:intergenic | 35.0% | |
| ! | CCACCCAATCTAATTTTCAA+GGG | + | chr8_3:63452760-63452779 | None:intergenic | 35.0% |
| ! | ACCACCCAATCTAATTTTCA+AGG | + | chr8_3:63452761-63452780 | None:intergenic | 35.0% |
| ! | GTTAAGTTTGGTTTCACTCA+AGG | - | chr8_3:63452856-63452875 | Msa1301440:intron | 35.0% |
| !! | AACAGCTTTTTCCAAAAAGC+AGG | - | chr8_3:63452910-63452929 | Msa1301440:intron | 35.0% |
| !! | ACAGCTTTTTCCAAAAAGCA+GGG | - | chr8_3:63452911-63452930 | Msa1301440:intron | 35.0% |
| TTTGGATTAAATGCTCTTGC+TGG | - | chr8_3:63453097-63453116 | Msa1301440:CDS | 35.0% | |
| ! | GCAAAGAAGTACACTATTCA+TGG | - | chr8_3:63453199-63453218 | Msa1301440:intron | 35.0% |
| ! | AGAAGTACACTATTCATGGT+TGG | - | chr8_3:63453203-63453222 | Msa1301440:intron | 35.0% |
| GAAGTACACTATTCATGGTT+GGG | - | chr8_3:63453204-63453223 | Msa1301440:intron | 35.0% | |
| ACTATTCATGGTTGGGAATT+CGG | - | chr8_3:63453211-63453230 | Msa1301440:CDS | 35.0% | |
| !!! | AGGAGCTTTTTTTATTGGAC+AGG | - | chr8_3:63453484-63453503 | Msa1301440:intron | 35.0% |
| TAGTTCAGGATGTATATCGA+AGG | - | chr8_3:63453587-63453606 | Msa1301440:CDS | 35.0% | |
| AGTTCAGGATGTATATCGAA+GGG | - | chr8_3:63453588-63453607 | Msa1301440:CDS | 35.0% | |
| !! | CTTTGAGGCAAATTGGTTTA+AGG | - | chr8_3:63453648-63453667 | Msa1301440:CDS | 35.0% |
| TCCAAGGTTATAAATGTGGT+GGG | + | chr8_3:63453713-63453732 | None:intergenic | 35.0% | |
| ACAGAAAGCTACTTACATAC+AGG | - | chr8_3:63453803-63453822 | Msa1301440:intron | 35.0% | |
| AGAATTCTTTCAACTAAGCC+CGG | + | chr8_3:63453836-63453855 | None:intergenic | 35.0% | |
| ! | ATGCATTTGTCAACAGCTTT+TGG | - | chr8_3:63453993-63454012 | Msa1301440:CDS | 35.0% |
| ! | TGTAACGAACCGTGATTTTT+CGG | - | chr8_3:63454020-63454039 | Msa1301440:CDS | 35.0% |
| TCGGAATATCAGTATTCAGT+AGG | - | chr8_3:63454039-63454058 | Msa1301440:CDS | 35.0% | |
| GTGATTATCAGATAAAGCGT+TGG | + | chr8_3:63454070-63454089 | None:intergenic | 35.0% | |
| ACTTTGATAGGAGGAAACTA+TGG | - | chr8_3:63454159-63454178 | Msa1301440:intron | 35.0% | |
| TTTCTTACAGTGCTCTTCTT+TGG | - | chr8_3:63454435-63454454 | Msa1301440:CDS | 35.0% | |
| GATCTTCTTTGTTCCATAGA+AGG | + | chr8_3:63454495-63454514 | None:intergenic | 35.0% | |
| AACTTATGCACATTGTGCAA+AGG | - | chr8_3:63454517-63454536 | Msa1301440:intron | 35.0% | |
| TGATGTTACTATCTTGCAGA+AGG | - | chr8_3:63454647-63454666 | Msa1301440:intron | 35.0% | |
| GATGTTACTATCTTGCAGAA+GGG | - | chr8_3:63454648-63454667 | Msa1301440:intron | 35.0% | |
| ATTATGAGTGGATGGTTTCT+TGG | + | chr8_3:63454742-63454761 | None:intergenic | 35.0% | |
| AAACCATCCACTCATAATGT+GGG | - | chr8_3:63454744-63454763 | Msa1301440:intron | 35.0% | |
| ! | AGAGTACCATTTAACAGCAA+AGG | - | chr8_3:63454782-63454801 | Msa1301440:intron | 35.0% |
| TACCATTTAACAGCAAAGGA+TGG | - | chr8_3:63454786-63454805 | Msa1301440:CDS | 35.0% | |
| !! | TTCCATCCTTTGCTGTTAAA+TGG | + | chr8_3:63454791-63454810 | None:intergenic | 35.0% |
| AGCCAAACTATGGTACTAAA+TGG | - | chr8_3:63454819-63454838 | Msa1301440:CDS | 35.0% | |
| ATTCTAAGTGTAGATTCAGC+TGG | - | chr8_3:63454846-63454865 | Msa1301440:CDS | 35.0% | |
| CTTCAAAGCCAATAACAGTT+AGG | - | chr8_3:63454904-63454923 | Msa1301440:CDS | 35.0% | |
| GCAAAACCAATCAAAATCCT+AGG | + | chr8_3:63455105-63455124 | None:intergenic | 35.0% | |
| !!! | AGCTTCCGGGTATGTTTTTT+TGG | - | chr8_3:63452201-63452220 | Msa1301440:three_prime_UTR | 40.0% |
| AGCTTCAGTTTCAGCTTCAT+TGG | - | chr8_3:63452236-63452255 | Msa1301440:exon | 40.0% | |
| GGAGTGAATTGCATAGGATT+AGG | - | chr8_3:63452257-63452276 | Msa1301440:CDS | 40.0% | |
| GGAAATGATTCAGCTGTGAA+AGG | - | chr8_3:63452278-63452297 | Msa1301440:CDS | 40.0% | |
| CCCTTGAAAATTAGATTGGG+TGG | - | chr8_3:63452757-63452776 | Msa1301440:CDS | 40.0% | |
| GTGCTTACCAATGCAAAGAT+GGG | - | chr8_3:63452879-63452898 | Msa1301440:intron | 40.0% | |
| ! | TGTGTTTCTACGCGTGAATT+AGG | - | chr8_3:63452984-63453003 | Msa1301440:intron | 40.0% |
| TGGACAGGTAATGAATTGTG+TGG | - | chr8_3:63453499-63453518 | Msa1301440:CDS | 40.0% | |
| ! | GGTGCAATGATTAGTGGTTT+TGG | + | chr8_3:63453619-63453638 | None:intergenic | 40.0% |
| AAACCACTAATCATTGCACC+TGG | - | chr8_3:63453619-63453638 | Msa1301440:CDS | 40.0% | |
| ACCCACCACATTTATAACCT+TGG | - | chr8_3:63453709-63453728 | Msa1301440:intron | 40.0% | |
| GTCCAAGGTTATAAATGTGG+TGG | + | chr8_3:63453714-63453733 | None:intergenic | 40.0% | |
| CTGGTCCAAGGTTATAAATG+TGG | + | chr8_3:63453717-63453736 | None:intergenic | 40.0% | |
| CACATTTATAACCTTGGACC+AGG | - | chr8_3:63453715-63453734 | Msa1301440:intron | 40.0% | |
| !! | CTGTTTTGTTGGAACATACC+TGG | + | chr8_3:63453736-63453755 | None:intergenic | 40.0% |
| GAAAGCTACTTACATACAGG+AGG | - | chr8_3:63453806-63453825 | Msa1301440:intron | 40.0% | |
| CTCAATCCATCCTCTCTTAA+TGG | - | chr8_3:63453854-63453873 | Msa1301440:intron | 40.0% | |
| TACAGGTATTTGGATCAGCT+TGG | - | chr8_3:63454096-63454115 | Msa1301440:CDS | 40.0% | |
| TACTGCAGACAGACTTTGAT+AGG | - | chr8_3:63454147-63454166 | Msa1301440:intron | 40.0% | |
| TGGATTTGGCATGAAAGTAG+TGG | + | chr8_3:63454196-63454215 | None:intergenic | 40.0% | |
| AGCATCACAGACACTAATGA+AGG | + | chr8_3:63454301-63454320 | None:intergenic | 40.0% | |
| ! | ATTGCCTGCAACTTTGAGAA+AGG | - | chr8_3:63454327-63454346 | Msa1301440:CDS | 40.0% |
| CGGGACCCTAAATTCAAAAT+AGG | + | chr8_3:63454354-63454373 | None:intergenic | 40.0% | |
| GAAACCATCCACTCATAATG+TGG | - | chr8_3:63454743-63454762 | Msa1301440:intron | 40.0% | |
| TGATTCTCCCACATTATGAG+TGG | + | chr8_3:63454754-63454773 | None:intergenic | 40.0% | |
| GAAAGAGGCCTAACTGTTAT+TGG | + | chr8_3:63454915-63454934 | None:intergenic | 40.0% | |
| CACTAGGCTAAACCGAAAAT+CGG | - | chr8_3:63454997-63455016 | Msa1301440:CDS | 40.0% | |
| GACATTCAGTTTCTTGCCTT+AGG | - | chr8_3:63455187-63455206 | Msa1301440:five_prime_UTR | 40.0% | |
| AGAAAACGACTCACTACCTA+AGG | + | chr8_3:63455206-63455225 | None:intergenic | 40.0% | |
| ! | ACTGTAGTGTCTTTTGCAGC+AGG | - | chr8_3:63451992-63452011 | Msa1301440:three_prime_UTR | 45.0% |
| TTACTCTGCTGTAGTAGCAG+AGG | + | chr8_3:63452075-63452094 | None:intergenic | 45.0% | |
| GGTGCTTACCAATGCAAAGA+TGG | - | chr8_3:63452878-63452897 | Msa1301440:intron | 45.0% | |
| AGCTCATCCCATCTTTGCAT+TGG | + | chr8_3:63452889-63452908 | None:intergenic | 45.0% | |
| TCGGCATTAGTGTAGTTCCA+AGG | + | chr8_3:63453157-63453176 | None:intergenic | 45.0% | |
| ! | AGTGAACTCATGGCTTGTGA+CGG | + | chr8_3:63453341-63453360 | None:intergenic | 45.0% |
| GGTAATGAATTGTGTGGAGC+TGG | - | chr8_3:63453505-63453524 | Msa1301440:CDS | 45.0% | |
| !! | GAGGCTTCTTTGAGGCAAAT+TGG | - | chr8_3:63453641-63453660 | Msa1301440:CDS | 45.0% |
| ATCGGACGAATCCACAAATG+TGG | - | chr8_3:63453684-63453703 | Msa1301440:CDS | 45.0% | |
| CTTACATACAGGAGGTGATC+CGG | - | chr8_3:63453814-63453833 | Msa1301440:intron | 45.0% | |
| TTACATACAGGAGGTGATCC+GGG | - | chr8_3:63453815-63453834 | Msa1301440:intron | 45.0% | |
| TCCATCCTCTCTTAATGGAG+TGG | - | chr8_3:63453859-63453878 | Msa1301440:intron | 45.0% | |
| AAGAACCTCAGCTCAAGCAT+GGG | - | chr8_3:63453922-63453941 | Msa1301440:intron | 45.0% | |
| CTTGGCATGTCAGCTACTTA+TGG | - | chr8_3:63454114-63454133 | Msa1301440:CDS | 45.0% | |
| TGCAGACAGACTTTGATAGG+AGG | - | chr8_3:63454150-63454169 | Msa1301440:intron | 45.0% | |
| AGGACCTTTCTCAAAGTTGC+AGG | + | chr8_3:63454334-63454353 | None:intergenic | 45.0% | |
| TTCCATAGAAGGTAGCTGAC+AGG | + | chr8_3:63454484-63454503 | None:intergenic | 45.0% | |
| ! | GGCAAAATTTAAGGCCACTC+TGG | + | chr8_3:63454721-63454740 | None:intergenic | 45.0% |
| TCTCCCACATTATGAGTGGA+TGG | + | chr8_3:63454750-63454769 | None:intergenic | 45.0% | |
| ! | CAAGCTTTAACAGCAGCATC+TGG | + | chr8_3:63454957-63454976 | None:intergenic | 45.0% |
| ! | TTGCAGCTAGCTTAGCTCAA+TGG | - | chr8_3:63454974-63454993 | Msa1301440:CDS | 45.0% |
| TAGCTTAGCTCAATGGCACT+AGG | - | chr8_3:63454981-63455000 | Msa1301440:CDS | 45.0% | |
| ! | AACCGAAAATCGGTTTCCCT+TGG | - | chr8_3:63455007-63455026 | Msa1301440:CDS | 45.0% |
| !! | CACCAAGGGAAACCGATTTT+CGG | + | chr8_3:63455012-63455031 | None:intergenic | 45.0% |
| !! | CGAAGCCCTAGGATTTTGAT+TGG | - | chr8_3:63455096-63455115 | Msa1301440:five_prime_UTR | 45.0% |
| GCCACCTCAGAAATGTGACT+GGG | - | chr8_3:63452376-63452395 | Msa1301440:CDS | 50.0% | |
| CCACCTCAGAAATGTGACTG+GGG | - | chr8_3:63452377-63452396 | Msa1301440:CDS | 50.0% | |
| CTTCCCCAGTCACATTTCTG+AGG | + | chr8_3:63452383-63452402 | None:intergenic | 50.0% | |
| TGACTGGGGAAGATGCAGTT+GGG | - | chr8_3:63452391-63452410 | Msa1301440:CDS | 50.0% | |
| GAATCCCAGAGTTCTGCTGT+TGG | - | chr8_3:63453130-63453149 | Msa1301440:intron | 50.0% | |
| AGGTCCAACAGCAGAACTCT+GGG | + | chr8_3:63453137-63453156 | None:intergenic | 50.0% | |
| AAGGTCCAACAGCAGAACTC+TGG | + | chr8_3:63453138-63453157 | None:intergenic | 50.0% | |
| AGAGTTCTGCTGTTGGACCT+TGG | - | chr8_3:63453137-63453156 | Msa1301440:intron | 50.0% | |
| GAATTGTGTGGAGCTGGAAC+TGG | - | chr8_3:63453511-63453530 | Msa1301440:CDS | 50.0% | |
| CCTCCAGGTGCAATGATTAG+TGG | + | chr8_3:63453625-63453644 | None:intergenic | 50.0% | |
| CCACTAATCATTGCACCTGG+AGG | - | chr8_3:63453622-63453641 | Msa1301440:CDS | 50.0% | |
| TTTGCCTCAAAGAAGCCTCC+AGG | + | chr8_3:63453640-63453659 | None:intergenic | 50.0% | |
| GTTGGAACATACCTGGTCCA+AGG | + | chr8_3:63453729-63453748 | None:intergenic | 50.0% | |
| GCCACTCCATTAAGAGAGGA+TGG | + | chr8_3:63453863-63453882 | None:intergenic | 50.0% | |
| GTCAGCCACTCCATTAAGAG+AGG | + | chr8_3:63453867-63453886 | None:intergenic | 50.0% | |
| CAAGAACCTCAGCTCAAGCA+TGG | - | chr8_3:63453921-63453940 | Msa1301440:intron | 50.0% | |
| !! | TCTTCTTTGGCACCGACTCA+TGG | - | chr8_3:63454448-63454467 | Msa1301440:CDS | 50.0% |
| !! | CTTCTTTGGCACCGACTCAT+GGG | - | chr8_3:63454449-63454468 | Msa1301440:CDS | 50.0% |
| GTCCTGTCAGCTACCTTCTA+TGG | - | chr8_3:63454479-63454498 | Msa1301440:intron | 50.0% | |
| GGCCACCTCAGAAATGTGAC+TGG | - | chr8_3:63452375-63452394 | Msa1301440:CDS | 55.0% | |
| ! | CCCCAGTCACATTTCTGAGG+TGG | + | chr8_3:63452380-63452399 | None:intergenic | 55.0% |
| GTGACTGGGGAAGATGCAGT+TGG | - | chr8_3:63452390-63452409 | Msa1301440:CDS | 55.0% | |
| GACTGGGGAAGATGCAGTTG+GGG | - | chr8_3:63452392-63452411 | Msa1301440:CDS | 55.0% | |
| TGCACCTGGAGGCTTCTTTG+AGG | - | chr8_3:63453633-63453652 | Msa1301440:CDS | 55.0% | |
| !! | GTGGTGGGTGACCACATTTG+TGG | + | chr8_3:63453698-63453717 | None:intergenic | 55.0% |
| ACCTCAGCTCAAGCATGGGT+TGG | - | chr8_3:63453926-63453945 | Msa1301440:intron | 55.0% | |
| ACCAACCCATGCTTGAGCTG+AGG | + | chr8_3:63453930-63453949 | None:intergenic | 55.0% | |
| !! | CAAGCATGGGTTGGTGAAGC+AGG | - | chr8_3:63453935-63453954 | Msa1301440:intron | 55.0% |
| !! | CATGGGTTGGTGAAGCAGGA+GGG | - | chr8_3:63453939-63453958 | Msa1301440:intron | 55.0% |
| !! | ATGGGTTGGTGAAGCAGGAG+GGG | - | chr8_3:63453940-63453959 | Msa1301440:intron | 55.0% |
| TTGGGGCAGTGGTCATCATC+TGG | - | chr8_3:63453964-63453983 | Msa1301440:intron | 55.0% | |
| CACCACTGTTCAAGCCAGAG+TGG | - | chr8_3:63454704-63454723 | Msa1301440:intron | 55.0% | |
| !! | GCATGGGTTGGTGAAGCAGG+AGG | - | chr8_3:63453938-63453957 | Msa1301440:intron | 60.0% |
| TTGGTGAAGCAGGAGGGGCT+TGG | - | chr8_3:63453945-63453964 | Msa1301440:intron | 60.0% | |
| TGGTGAAGCAGGAGGGGCTT+GGG | - | chr8_3:63453946-63453965 | Msa1301440:intron | 60.0% | |
| !! | CTTTGGCACCGACTCATGGG+AGG | - | chr8_3:63454452-63454471 | Msa1301440:CDS | 60.0% |
| GGACACGTCCTCCCATGAGT+CGG | + | chr8_3:63454463-63454482 | None:intergenic | 60.0% | |
| ! | GGCCACTCTGGCTTGAACAG+TGG | + | chr8_3:63454709-63454728 | None:intergenic | 60.0% |
| TGTTTGGAGGGCGAAGCCCT+AGG | - | chr8_3:63455085-63455104 | Msa1301440:five_prime_UTR | 60.0% | |
| GGTGAAGCAGGAGGGGCTTG+GGG | - | chr8_3:63453947-63453966 | Msa1301440:intron | 65.0% | |
| GCAGGAGGGGCTTGGGGCAG+TGG | - | chr8_3:63453953-63453972 | Msa1301440:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 63451963 | 63455259 | 63451963 | ID=Msa1301440;Name=Msa1301440 |
| chr8_3 | mRNA | 63451963 | 63455259 | 63451963 | ID=Msa1301440-mRNA-1;Parent=Msa1301440;Name=Msa1301440-mRNA-1;_AED=0.22;_eAED=0.22;_QI=222|1|1|1|1|1|9|276|528 |
| chr8_3 | exon | 63451963 | 63452556 | 63451963 | ID=Msa1301440-mRNA-1:exon:19011;Parent=Msa1301440-mRNA-1 |
| chr8_3 | exon | 63452678 | 63452777 | 63452678 | ID=Msa1301440-mRNA-1:exon:19010;Parent=Msa1301440-mRNA-1 |
| chr8_3 | exon | 63452996 | 63453121 | 63452996 | ID=Msa1301440-mRNA-1:exon:19009;Parent=Msa1301440-mRNA-1 |
| chr8_3 | exon | 63453208 | 63453397 | 63453208 | ID=Msa1301440-mRNA-1:exon:19008;Parent=Msa1301440-mRNA-1 |
| chr8_3 | exon | 63453486 | 63453716 | 63453486 | ID=Msa1301440-mRNA-1:exon:19007;Parent=Msa1301440-mRNA-1 |
| chr8_3 | exon | 63453990 | 63454138 | 63453990 | ID=Msa1301440-mRNA-1:exon:19006;Parent=Msa1301440-mRNA-1 |
| chr8_3 | exon | 63454290 | 63454473 | 63454290 | ID=Msa1301440-mRNA-1:exon:19005;Parent=Msa1301440-mRNA-1 |
| chr8_3 | exon | 63454583 | 63454619 | 63454583 | ID=Msa1301440-mRNA-1:exon:19004;Parent=Msa1301440-mRNA-1 |
| chr8_3 | exon | 63454786 | 63455259 | 63454786 | ID=Msa1301440-mRNA-1:exon:19003;Parent=Msa1301440-mRNA-1 |
| chr8_3 | five_prime_UTR | 63455038 | 63455259 | 63455038 | ID=Msa1301440-mRNA-1:five_prime_utr;Parent=Msa1301440-mRNA-1 |
| chr8_3 | CDS | 63454786 | 63455037 | 63454786 | ID=Msa1301440-mRNA-1:cds;Parent=Msa1301440-mRNA-1 |
| chr8_3 | CDS | 63454583 | 63454619 | 63454583 | ID=Msa1301440-mRNA-1:cds;Parent=Msa1301440-mRNA-1 |
| chr8_3 | CDS | 63454290 | 63454473 | 63454290 | ID=Msa1301440-mRNA-1:cds;Parent=Msa1301440-mRNA-1 |
| chr8_3 | CDS | 63453990 | 63454138 | 63453990 | ID=Msa1301440-mRNA-1:cds;Parent=Msa1301440-mRNA-1 |
| chr8_3 | CDS | 63453486 | 63453716 | 63453486 | ID=Msa1301440-mRNA-1:cds;Parent=Msa1301440-mRNA-1 |
| chr8_3 | CDS | 63453208 | 63453397 | 63453208 | ID=Msa1301440-mRNA-1:cds;Parent=Msa1301440-mRNA-1 |
| chr8_3 | CDS | 63452996 | 63453121 | 63452996 | ID=Msa1301440-mRNA-1:cds;Parent=Msa1301440-mRNA-1 |
| chr8_3 | CDS | 63452678 | 63452777 | 63452678 | ID=Msa1301440-mRNA-1:cds;Parent=Msa1301440-mRNA-1 |
| chr8_3 | CDS | 63452239 | 63452556 | 63452239 | ID=Msa1301440-mRNA-1:cds;Parent=Msa1301440-mRNA-1 |
| chr8_3 | three_prime_UTR | 63451963 | 63452238 | 63451963 | ID=Msa1301440-mRNA-1:three_prime_utr;Parent=Msa1301440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
