Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1302220 | XP_003609606.2 | 94.616 | 743 | 14 | 2 | 1 | 741 | 1 | 719 | 0.0 | 1437 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1302220 | sp|Q75LJ4|ACBP6_ORYSJ | 34.532 | 417 | 239 | 7 | 27 | 437 | 115 | 503 | 1.51e-69 | 243 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1302220 | G7JJ54 | 94.616 | 743 | 14 | 2 | 1 | 741 | 1 | 719 | 0.0 | 1437 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1302220 | Msa1341250 | 0.838511 | 2.753363e-57 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1302220 | MtrunA17_Chr4g0066851 | 94.616 | 743 | 14 | 2 | 1 | 741 | 1 | 719 | 0.0 | 1437 |
Msa1302220 | MtrunA17_Chr2g0286241 | 70.013 | 747 | 170 | 11 | 1 | 741 | 1 | 699 | 0.0 | 1021 |
Msa1302220 | MtrunA17_Chr7g0272641 | 33.504 | 391 | 227 | 6 | 27 | 415 | 121 | 480 | 2.89e-62 | 221 |
Msa1302220 | MtrunA17_Chr1g0197401 | 34.911 | 338 | 193 | 3 | 80 | 414 | 13 | 326 | 2.70e-61 | 214 |
Msa1302220 | MtrunA17_Chr1g0192821 | 26.103 | 272 | 170 | 5 | 82 | 353 | 65 | 305 | 1.50e-25 | 112 |
Msa1302220 | MtrunA17_Chr1g0192821 | 33.488 | 215 | 135 | 6 | 205 | 416 | 55 | 264 | 5.07e-24 | 107 |
Msa1302220 | MtrunA17_Chr1g0192821 | 28.276 | 290 | 171 | 7 | 82 | 368 | 15 | 270 | 1.15e-23 | 106 |
Msa1302220 | MtrunA17_Chr1g0192821 | 24.793 | 242 | 136 | 7 | 79 | 312 | 112 | 315 | 6.07e-17 | 85.1 |
Msa1302220 | MtrunA17_Chr1g0192821 | 32.484 | 157 | 97 | 4 | 262 | 416 | 11 | 160 | 1.06e-12 | 71.6 |
Msa1302220 | MtrunA17_Chr4g0061581 | 28.462 | 260 | 154 | 6 | 79 | 334 | 62 | 293 | 5.64e-23 | 103 |
Msa1302220 | MtrunA17_Chr4g0061581 | 25.249 | 301 | 179 | 10 | 89 | 377 | 19 | 285 | 3.74e-17 | 85.9 |
Msa1302220 | MtrunA17_Chr4g0061581 | 28.571 | 196 | 124 | 6 | 219 | 399 | 16 | 210 | 8.48e-16 | 81.3 |
Msa1302220 | MtrunA17_Chr1g0198221 | 25.714 | 315 | 172 | 12 | 88 | 376 | 13 | 291 | 4.55e-17 | 85.1 |
Msa1302220 | MtrunA17_Chr1g0198221 | 31.140 | 228 | 124 | 9 | 81 | 301 | 113 | 314 | 9.58e-12 | 68.2 |
Msa1302220 | MtrunA17_Chr2g0311721 | 26.667 | 210 | 132 | 7 | 208 | 410 | 53 | 247 | 1.49e-15 | 78.6 |
Msa1302220 | MtrunA17_Chr2g0311721 | 28.333 | 180 | 125 | 4 | 215 | 392 | 8 | 185 | 3.11e-14 | 74.7 |
Msa1302220 | MtrunA17_Chr2g0311721 | 23.684 | 266 | 154 | 8 | 82 | 334 | 60 | 289 | 1.90e-12 | 69.3 |
Msa1302220 | MtrunA17_Chr4g0074871 | 26.446 | 242 | 138 | 9 | 96 | 330 | 279 | 487 | 4.23e-15 | 79.7 |
Msa1302220 | MtrunA17_Chr4g0074871 | 25.097 | 259 | 158 | 7 | 92 | 349 | 333 | 556 | 7.25e-15 | 79.0 |
Msa1302220 | MtrunA17_Chr4g0074871 | 26.404 | 178 | 125 | 3 | 225 | 402 | 333 | 504 | 1.33e-11 | 68.6 |
Msa1302220 | MtrunA17_Chr1g0196221 | 25.701 | 214 | 122 | 8 | 139 | 330 | 7 | 205 | 3.09e-11 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1302220 | AT5G18590.2 | 60.000 | 765 | 224 | 17 | 1 | 740 | 1 | 708 | 0.0 | 850 |
Msa1302220 | AT5G18590.1 | 60.000 | 765 | 224 | 17 | 1 | 740 | 1 | 708 | 0.0 | 850 |
Msa1302220 | AT3G05420.2 | 30.579 | 484 | 295 | 9 | 39 | 509 | 131 | 586 | 9.11e-66 | 231 |
Msa1302220 | AT3G05420.1 | 30.579 | 484 | 295 | 9 | 39 | 509 | 130 | 585 | 9.80e-66 | 231 |
Msa1302220 | AT5G27630.2 | 32.481 | 391 | 236 | 4 | 82 | 469 | 172 | 537 | 1.02e-62 | 220 |
Msa1302220 | AT5G27630.3 | 32.481 | 391 | 236 | 4 | 82 | 469 | 172 | 537 | 1.88e-62 | 221 |
Msa1302220 | AT5G27630.4 | 35.207 | 338 | 191 | 4 | 81 | 415 | 171 | 483 | 2.09e-62 | 221 |
Msa1302220 | AT5G27630.1 | 35.207 | 338 | 191 | 4 | 81 | 415 | 171 | 483 | 2.57e-62 | 221 |
Msa1302220 | AT5G04420.2 | 32.670 | 352 | 204 | 3 | 80 | 422 | 20 | 347 | 2.05e-56 | 201 |
Msa1302220 | AT5G04420.1 | 32.670 | 352 | 204 | 3 | 80 | 422 | 20 | 347 | 2.05e-56 | 201 |
Msa1302220 | AT5G04420.3 | 32.670 | 352 | 204 | 3 | 80 | 422 | 20 | 347 | 2.05e-56 | 201 |
Msa1302220 | AT1G18610.1 | 29.572 | 257 | 149 | 6 | 82 | 334 | 65 | 293 | 1.05e-25 | 112 |
Msa1302220 | AT1G18610.1 | 24.179 | 335 | 205 | 10 | 83 | 405 | 13 | 310 | 1.45e-16 | 84.0 |
Msa1302220 | AT1G18610.1 | 25.207 | 242 | 139 | 8 | 79 | 310 | 112 | 321 | 4.04e-14 | 76.3 |
Msa1302220 | AT1G18610.2 | 29.572 | 257 | 149 | 6 | 82 | 334 | 65 | 293 | 1.05e-25 | 112 |
Msa1302220 | AT1G18610.2 | 24.179 | 335 | 205 | 10 | 83 | 405 | 13 | 310 | 1.45e-16 | 84.0 |
Msa1302220 | AT1G18610.2 | 25.207 | 242 | 139 | 8 | 79 | 310 | 112 | 321 | 4.04e-14 | 76.3 |
Msa1302220 | AT1G74150.4 | 27.000 | 300 | 182 | 7 | 58 | 350 | 22 | 291 | 3.28e-23 | 105 |
Msa1302220 | AT1G74150.1 | 27.536 | 276 | 163 | 7 | 82 | 350 | 62 | 307 | 4.22e-23 | 104 |
Msa1302220 | AT1G74150.1 | 38.235 | 136 | 76 | 3 | 201 | 330 | 48 | 181 | 1.07e-16 | 84.7 |
Msa1302220 | AT1G74150.1 | 27.468 | 233 | 145 | 9 | 225 | 441 | 19 | 243 | 3.27e-16 | 83.2 |
Msa1302220 | AT1G74150.2 | 27.536 | 276 | 163 | 7 | 82 | 350 | 62 | 307 | 4.61e-23 | 104 |
Msa1302220 | AT1G74150.2 | 38.235 | 136 | 76 | 3 | 201 | 330 | 48 | 181 | 1.15e-16 | 84.3 |
Msa1302220 | AT1G74150.2 | 27.468 | 233 | 145 | 9 | 225 | 441 | 19 | 243 | 3.46e-16 | 82.8 |
Msa1302220 | AT1G74150.3 | 27.536 | 276 | 163 | 7 | 82 | 350 | 62 | 307 | 4.71e-23 | 104 |
Msa1302220 | AT1G74150.3 | 38.235 | 136 | 76 | 3 | 201 | 330 | 48 | 181 | 1.14e-16 | 84.3 |
Msa1302220 | AT1G74150.3 | 27.468 | 233 | 145 | 9 | 225 | 441 | 19 | 243 | 3.45e-16 | 82.8 |
Msa1302220 | AT4G04670.1 | 25.670 | 261 | 158 | 6 | 90 | 349 | 320 | 545 | 5.00e-18 | 89.7 |
Msa1302220 | AT4G04670.1 | 26.846 | 149 | 108 | 1 | 225 | 373 | 322 | 469 | 7.55e-11 | 66.2 |
Msa1302220 | AT3G07720.1 | 30.000 | 170 | 103 | 4 | 205 | 367 | 52 | 212 | 8.14e-17 | 82.8 |
Msa1302220 | AT3G07720.1 | 27.885 | 208 | 142 | 6 | 215 | 420 | 10 | 211 | 1.39e-13 | 73.2 |
Msa1302220 | AT2G36360.2 | 25.484 | 310 | 175 | 11 | 81 | 367 | 3 | 279 | 1.33e-16 | 84.0 |
Msa1302220 | AT2G36360.2 | 30.488 | 164 | 103 | 4 | 222 | 375 | 14 | 176 | 1.25e-14 | 77.8 |
Msa1302220 | AT2G36360.2 | 31.092 | 238 | 128 | 10 | 81 | 310 | 113 | 322 | 3.60e-12 | 70.1 |
Msa1302220 | AT2G36360.1 | 25.484 | 310 | 175 | 11 | 81 | 367 | 3 | 279 | 1.33e-16 | 84.0 |
Msa1302220 | AT2G36360.1 | 30.488 | 164 | 103 | 4 | 222 | 375 | 14 | 176 | 1.25e-14 | 77.8 |
Msa1302220 | AT2G36360.1 | 31.092 | 238 | 128 | 10 | 81 | 310 | 113 | 322 | 3.60e-12 | 70.1 |
Msa1302220 | AT2G36360.3 | 25.484 | 310 | 175 | 11 | 81 | 367 | 3 | 279 | 1.68e-16 | 83.6 |
Msa1302220 | AT2G36360.3 | 30.488 | 164 | 103 | 4 | 222 | 375 | 14 | 176 | 1.35e-14 | 77.8 |
Msa1302220 | AT2G36360.3 | 31.092 | 238 | 128 | 10 | 81 | 310 | 113 | 322 | 3.96e-12 | 69.7 |
Msa1302220 | AT2G36360.4 | 25.484 | 310 | 175 | 11 | 81 | 367 | 3 | 279 | 2.33e-16 | 83.2 |
Msa1302220 | AT2G36360.4 | 30.488 | 164 | 103 | 4 | 222 | 375 | 14 | 176 | 1.87e-14 | 77.4 |
Msa1302220 | AT2G36360.4 | 31.092 | 238 | 128 | 10 | 81 | 310 | 113 | 322 | 5.34e-12 | 69.3 |
Msa1302220 | AT2G36360.5 | 25.484 | 310 | 184 | 12 | 81 | 367 | 3 | 288 | 8.53e-16 | 81.6 |
Msa1302220 | AT1G74150.6 | 32.624 | 141 | 89 | 3 | 215 | 350 | 2 | 141 | 9.81e-15 | 77.4 |
Msa1302220 | AT1G74150.5 | 32.624 | 141 | 89 | 3 | 215 | 350 | 2 | 141 | 9.81e-15 | 77.4 |
Msa1302220 | AT3G16410.1 | 28.492 | 179 | 126 | 2 | 215 | 392 | 302 | 479 | 4.71e-13 | 73.2 |
Msa1302220 | AT3G16410.1 | 24.436 | 266 | 168 | 5 | 82 | 347 | 302 | 534 | 9.05e-12 | 68.9 |
Msa1302220 | AT1G03445.1 | 25.743 | 202 | 125 | 5 | 151 | 339 | 30 | 219 | 1.22e-12 | 72.0 |
Msa1302220 | AT3G16400.2 | 29.050 | 179 | 125 | 2 | 215 | 392 | 153 | 330 | 1.35e-12 | 71.2 |
Msa1302220 | AT3G16400.2 | 23.684 | 266 | 170 | 5 | 82 | 347 | 153 | 385 | 1.98e-11 | 67.4 |
Msa1302220 | AT3G16400.1 | 29.050 | 179 | 125 | 2 | 215 | 392 | 153 | 330 | 1.35e-12 | 71.2 |
Msa1302220 | AT3G16400.1 | 23.684 | 266 | 170 | 5 | 82 | 347 | 153 | 385 | 1.98e-11 | 67.4 |
Msa1302220 | AT1G03445.2 | 25.743 | 202 | 125 | 5 | 151 | 339 | 30 | 219 | 1.66e-12 | 71.6 |
Msa1302220 | AT2G33070.1 | 28.492 | 179 | 126 | 2 | 215 | 392 | 154 | 331 | 5.33e-12 | 69.3 |
Msa1302220 | AT2G33070.1 | 23.308 | 266 | 171 | 5 | 82 | 347 | 154 | 386 | 2.96e-11 | 67.0 |
Msa1302220 | AT2G33070.2 | 28.492 | 179 | 126 | 2 | 215 | 392 | 154 | 331 | 5.33e-12 | 69.3 |
Msa1302220 | AT2G33070.2 | 23.308 | 266 | 171 | 5 | 82 | 347 | 154 | 386 | 2.96e-11 | 67.0 |
Msa1302220 | AT2G33070.3 | 28.249 | 177 | 125 | 2 | 217 | 392 | 158 | 333 | 2.14e-11 | 67.4 |
Msa1302220 | AT5G50310.1 | 28.959 | 221 | 124 | 11 | 205 | 402 | 103 | 313 | 3.11e-11 | 67.4 |
Msa1302220 | AT5G50310.1 | 28.994 | 169 | 103 | 5 | 206 | 359 | 159 | 325 | 3.86e-11 | 67.0 |
Find 203 sgRNAs with CRISPR-Local
Find 497 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGGTATTATTGTCAATTTC+TGG | 0.141958 | 8_3:+64762997 | Msa1302220:CDS |
CCTTGCATGCAGGAATCTTT+AGG | 0.146868 | 8_3:-64763472 | None:intergenic |
TAGAAATTACCTTCCGAATT+TGG | 0.154916 | 8_3:-64762612 | None:intergenic |
GATAAAGTTCTTTATATATT+TGG | 0.156026 | 8_3:+64765019 | Msa1302220:CDS |
AAGTGAATATAAATCATTTA+AGG | 0.191129 | 8_3:-64765062 | None:intergenic |
ATTACATTGAGAATGGAATT+TGG | 0.204283 | 8_3:-64762760 | None:intergenic |
AGCTCTTATTTGATATTGTT+TGG | 0.210664 | 8_3:+64764743 | Msa1302220:CDS |
TGTAAACTTCAGAATCTTCT+AGG | 0.211311 | 8_3:+64762460 | Msa1302220:intron |
CCCGGAAGTGACAGAATTTC+AGG | 0.221004 | 8_3:+64764053 | Msa1302220:CDS |
ATATAAATCATTTAAGGTTT+TGG | 0.224898 | 8_3:-64765056 | None:intergenic |
CCAGGTATCTTATGGGAAAA+AGG | 0.239592 | 8_3:+64764004 | Msa1302220:intron |
ATAAGTTGTTGGCCTCTTCT+TGG | 0.244634 | 8_3:-64768506 | None:intergenic |
GCTCTTATTTGATATTGTTT+GGG | 0.245557 | 8_3:+64764744 | Msa1302220:CDS |
TAGCATGCCGCTGCTGTTAT+TGG | 0.270408 | 8_3:+64763190 | Msa1302220:intron |
AAGACTACCTTGTTGCATTT+GGG | 0.272272 | 8_3:+64767099 | Msa1302220:CDS |
TATAGATGCAGGACCTTTAC+TGG | 0.281962 | 8_3:-64767279 | None:intergenic |
AAAGACTACCTTGTTGCATT+TGG | 0.288100 | 8_3:+64767098 | Msa1302220:CDS |
GTAAAGTAGCAGCCCTAATA+AGG | 0.302289 | 8_3:+64768313 | Msa1302220:CDS |
CAAACAGAGATTGCAATCTA+TGG | 0.305635 | 8_3:+64768966 | Msa1302220:CDS |
ACCTGAAATTCTGTCACTTC+CGG | 0.311291 | 8_3:-64764054 | None:intergenic |
CTTGCATGCAGGAATCTTTA+GGG | 0.318925 | 8_3:-64763471 | None:intergenic |
CGTGCAGTGAAGTAGATAAT+TGG | 0.321646 | 8_3:+64769026 | Msa1302220:exon |
TCTCGTAGACGCACCAAATT+CGG | 0.323781 | 8_3:+64762599 | Msa1302220:CDS |
GGATAATGTTTACCAAACTA+TGG | 0.327359 | 8_3:-64763496 | None:intergenic |
CCTGAAATTCTGTCACTTCC+GGG | 0.334087 | 8_3:-64764053 | None:intergenic |
GCTCAGGCGGTTCCGAGAAT+TGG | 0.334965 | 8_3:+64762977 | Msa1302220:CDS |
AATCTTTAGGGGCAGACTAC+TGG | 0.343382 | 8_3:-64763459 | None:intergenic |
ATTTGCCTGTCTTAGATTGA+AGG | 0.347158 | 8_3:+64762678 | Msa1302220:intron |
CTACTTCACTGCACGTGAAA+TGG | 0.348878 | 8_3:-64769018 | None:intergenic |
CCATAAAAGCAGACAGGAAA+TGG | 0.356365 | 8_3:+64768413 | Msa1302220:CDS |
TAAGTTGTTGGCCTCTTCTT+GGG | 0.360114 | 8_3:-64768505 | None:intergenic |
AATGGAATTTGGAATTCGTT+TGG | 0.360327 | 8_3:-64762749 | None:intergenic |
GGTACTAAATGGTATATTAC+AGG | 0.362413 | 8_3:+64765645 | Msa1302220:CDS |
TTGGGATGCCTAACAGTAAC+TGG | 0.362709 | 8_3:-64762730 | None:intergenic |
CATTATCAATTTCATGAGAA+TGG | 0.366750 | 8_3:-64762921 | None:intergenic |
CTGCACGTGAAATGGTTTCC+TGG | 0.376171 | 8_3:-64769010 | None:intergenic |
CTACTTTACTTTCATAGTAT+TGG | 0.380126 | 8_3:-64768299 | None:intergenic |
TTAATTAATTACATTGAGAA+TGG | 0.381803 | 8_3:-64762767 | None:intergenic |
AGAAGAAGAAAGAGAGAGTA+AGG | 0.384684 | 8_3:-64762490 | None:intergenic |
TGAAGTGAAGTGAAGATGTT+TGG | 0.385211 | 8_3:+64762572 | Msa1302220:exon |
TCAAAGCTGTTTGTAGAGTA+AGG | 0.387921 | 8_3:-64762528 | None:intergenic |
TCTGCAGTTGAACATGGTTC+TGG | 0.388697 | 8_3:+64767398 | Msa1302220:CDS |
GTTGCTACATGGTTCAATCT+TGG | 0.394586 | 8_3:-64764986 | None:intergenic |
TCAGGTGGAAGTGTTGGAAT+TGG | 0.395673 | 8_3:+64767220 | Msa1302220:intron |
ATGGAATTTGGAATTCGTTT+GGG | 0.396792 | 8_3:-64762748 | None:intergenic |
CTCTCTGTCTCTGTTTATCC+AGG | 0.401604 | 8_3:+64762129 | Msa1302220:five_prime_UTR |
TGCATGCAAGGGCCATAGTT+TGG | 0.402210 | 8_3:+64763484 | Msa1302220:CDS |
GATCCTGATTTATCATTCTC+AGG | 0.407816 | 8_3:-64768255 | None:intergenic |
GAAGATGGGGATGCAGTTAC+CGG | 0.409349 | 8_3:+64762889 | Msa1302220:CDS |
ACTTCTTAATATGTTATTAG+TGG | 0.410388 | 8_3:-64769216 | None:intergenic |
AGCATGCCGCTGCTGTTATT+GGG | 0.410438 | 8_3:+64763191 | Msa1302220:intron |
GTGCATCACTTTCAAATACT+TGG | 0.411735 | 8_3:-64768209 | None:intergenic |
TTTCCTGAGAATGATAAATC+AGG | 0.412257 | 8_3:+64768252 | Msa1302220:CDS |
GACACAGAATAAAATAATAA+TGG | 0.413226 | 8_3:-64762252 | None:intergenic |
GGCCGATGCATTGAAGGAAA+TGG | 0.413822 | 8_3:+64768446 | Msa1302220:CDS |
CTCAGGCGGTTCCGAGAATT+GGG | 0.419891 | 8_3:+64762978 | Msa1302220:CDS |
GCAATGGTCACAGTGTTGTC+AGG | 0.422481 | 8_3:+64764717 | Msa1302220:CDS |
TGGAATGTTGGAGGGTCAAC+TGG | 0.425176 | 8_3:+64768341 | Msa1302220:CDS |
TGCAGCTTCTCTGCTTGCCA+TGG | 0.428507 | 8_3:-64768370 | None:intergenic |
AGGGAGAAGGAGAAGAAGAT+GGG | 0.429455 | 8_3:+64762875 | Msa1302220:intron |
CAGGGAGAAGGAGAAGAAGA+TGG | 0.431384 | 8_3:+64762874 | Msa1302220:intron |
GAATAGAAGTACTGCTGCTT+CGG | 0.431494 | 8_3:+64762350 | Msa1302220:five_prime_UTR |
GAAGGACAAGTGTTGTTGTC+CGG | 0.435488 | 8_3:+64768168 | Msa1302220:CDS |
GACTTATCAGGTGGAAGTGT+TGG | 0.441862 | 8_3:+64767214 | Msa1302220:intron |
ACTGCTGCTTCGGTTCAACC+TGG | 0.442729 | 8_3:+64762360 | Msa1302220:five_prime_UTR |
AATACACTGTTACTAATTGA+AGG | 0.447013 | 8_3:-64769185 | None:intergenic |
CTAGAAGTCCAGTTACTGTT+AGG | 0.451050 | 8_3:+64762722 | Msa1302220:CDS |
TGACAATAATACCCAATTCT+CGG | 0.457202 | 8_3:-64762989 | None:intergenic |
CGTAAACTGATGAACATTAG+TGG | 0.459962 | 8_3:+64768129 | Msa1302220:CDS |
CTCTTATTTGATATTGTTTG+GGG | 0.460011 | 8_3:+64764745 | Msa1302220:CDS |
GAGATGTATACATTGAATCT+AGG | 0.462702 | 8_3:-64763033 | None:intergenic |
TGAGCTACAAGTACTGATAT+TGG | 0.463782 | 8_3:-64762959 | None:intergenic |
AAAATTGGCCGATGCATTGA+AGG | 0.464098 | 8_3:+64768440 | Msa1302220:CDS |
GGTGATGGTACTGCTGGTCC+TGG | 0.464502 | 8_3:-64762147 | None:intergenic |
AAAAGGAATGAGCACCTTGT+TGG | 0.466619 | 8_3:-64766342 | None:intergenic |
TTACGAAGGGAGACATTGCT+TGG | 0.466763 | 8_3:-64767461 | None:intergenic |
GGGTCAACTGGCAGCTTCCA+TGG | 0.467509 | 8_3:+64768353 | Msa1302220:CDS |
CCTAAAGATTCCTGCATGCA+AGG | 0.471695 | 8_3:+64763472 | Msa1302220:CDS |
ATGAGAATGGCCACTTGAGC+CGG | 0.473523 | 8_3:-64762908 | None:intergenic |
TTGTCCACTCTGACAACGTT+CGG | 0.473655 | 8_3:+64768535 | Msa1302220:CDS |
TACGAAGGGAGACATTGCTT+GGG | 0.475811 | 8_3:-64767460 | None:intergenic |
TTCCATTTCCTTCAATGCAT+CGG | 0.477323 | 8_3:-64768448 | None:intergenic |
AAGCAGAGAAGCTGCAGAGA+AGG | 0.479088 | 8_3:+64768377 | Msa1302220:CDS |
ATCTTTAGGGGCAGACTACT+GGG | 0.480997 | 8_3:-64763458 | None:intergenic |
AACATAGAGTAATTAAATGT+GGG | 0.483555 | 8_3:-64762285 | None:intergenic |
GATGTAGCCGTACCTGTAGT+TGG | 0.486165 | 8_3:-64768740 | None:intergenic |
AAGGACAAGTGTTGTTGTCC+GGG | 0.487114 | 8_3:+64768169 | Msa1302220:CDS |
TTGATCTCAAGTCGTTGACT+TGG | 0.492787 | 8_3:+64764810 | Msa1302220:CDS |
TCGACACGAGGAGTTATTGC+AGG | 0.493083 | 8_3:+64768699 | Msa1302220:CDS |
AACAGAGTCAACTAAGCGTT+GGG | 0.493230 | 8_3:-64767357 | None:intergenic |
TTTACCTCATTTCAGGGAGA+AGG | 0.493393 | 8_3:+64762862 | Msa1302220:intron |
AGAGTAATTAAATGTGGGGC+AGG | 0.494334 | 8_3:-64762280 | None:intergenic |
ATATTCACTTGACTTTGAAA+CGG | 0.495952 | 8_3:+64765075 | Msa1302220:CDS |
GAATTACCAGGGTTTCAGCT+TGG | 0.497187 | 8_3:+64767055 | Msa1302220:intron |
CATCATAGAGAGTTGCTACA+TGG | 0.497357 | 8_3:-64764997 | None:intergenic |
GTAAACTTCAGAATCTTCTA+GGG | 0.497740 | 8_3:+64762461 | Msa1302220:intron |
AAAGTTCTTTATATATTTGG+AGG | 0.498508 | 8_3:+64765022 | Msa1302220:CDS |
GACAATGTTTGATAAGTTGT+TGG | 0.502003 | 8_3:-64768517 | None:intergenic |
AGATGGAAGTTCTTTACCTC+AGG | 0.503667 | 8_3:+64767538 | Msa1302220:CDS |
GGAGCCAAGGTTAATATTGA+AGG | 0.505831 | 8_3:+64768150 | Msa1302220:CDS |
CTTGGTGCTTGTGCAATACA+AGG | 0.512632 | 8_3:+64767073 | Msa1302220:CDS |
AATATCAGTACTTGTAGCTC+AGG | 0.512794 | 8_3:+64762961 | Msa1302220:CDS |
TTATTGCAGGGGAAAGAGCT+AGG | 0.513791 | 8_3:+64768712 | Msa1302220:CDS |
AGCAGAGAAGCTGCAGAGAA+GGG | 0.519215 | 8_3:+64768378 | Msa1302220:CDS |
AAGTGAGTGCTGGTCACTCA+TGG | 0.520749 | 8_3:+64764166 | Msa1302220:CDS |
TTCCATCCATCACCTAGAGC+TGG | 0.522075 | 8_3:+64765603 | Msa1302220:CDS |
GAAGTGAAGTGAAGATGTTT+GGG | 0.522947 | 8_3:+64762573 | Msa1302220:exon |
CTGGTCACTCATGGAGGCAA+AGG | 0.527028 | 8_3:+64764175 | Msa1302220:CDS |
ATCACTTACGTGTAGTGAAG+TGG | 0.527387 | 8_3:-64764836 | None:intergenic |
GTTGGCGGTGAGTCTGCTAC+TGG | 0.528913 | 8_3:+64763229 | Msa1302220:CDS |
TCTATTAACGTGAGCTGAGG+TGG | 0.529972 | 8_3:+64769280 | Msa1302220:three_prime_UTR |
CAACAGAGTCAACTAAGCGT+TGG | 0.530123 | 8_3:-64767358 | None:intergenic |
GGAGGCAAAGGGAGACATAC+CGG | 0.532282 | 8_3:+64764187 | Msa1302220:CDS |
CGCGATCAAATTGCTTACGA+AGG | 0.532290 | 8_3:-64767475 | None:intergenic |
TCTTGATAGGTTGCTCGCAA+TGG | 0.536277 | 8_3:+64764701 | Msa1302220:intron |
ATCGATTCGAACGTTACGTT+AGG | 0.536783 | 8_3:-64762104 | None:intergenic |
GCATGACGTGGCCTTCCTCA+AGG | 0.542257 | 8_3:+64768563 | Msa1302220:CDS |
TCTGATTAGTGTAGATAATG+AGG | 0.542929 | 8_3:+64769103 | Msa1302220:three_prime_UTR |
ATCTGTCCATAAAAGCAGAC+AGG | 0.543682 | 8_3:+64768407 | Msa1302220:CDS |
AAACTATGGCCCTTGCATGC+AGG | 0.544560 | 8_3:-64763482 | None:intergenic |
TGCACGTGAAATGGTTTCCT+GGG | 0.544565 | 8_3:-64769009 | None:intergenic |
AGCTAGGGCATTCCAACTAC+AGG | 0.545831 | 8_3:+64768728 | Msa1302220:CDS |
AAGGTTCAGCAGCTTTCTGA+TGG | 0.547869 | 8_3:+64762697 | Msa1302220:CDS |
GTAACTGGGATCTACAGATT+CGG | 0.548399 | 8_3:-64767435 | None:intergenic |
GACTACCTTGTTGCATTTGG+GGG | 0.548558 | 8_3:+64767101 | Msa1302220:CDS |
AGACGTTCAACTCCCAGTAA+AGG | 0.548803 | 8_3:+64767266 | Msa1302220:CDS |
AGACTACCTTGTTGCATTTG+GGG | 0.550546 | 8_3:+64767100 | Msa1302220:CDS |
CAAAGCTGTTTGTAGAGTAA+GGG | 0.552495 | 8_3:-64762527 | None:intergenic |
TCACCTAGAGCTGGTTGTTG+TGG | 0.552879 | 8_3:+64765612 | Msa1302220:CDS |
GGGAGAAGGAGAAGAAGATG+GGG | 0.552987 | 8_3:+64762876 | Msa1302220:intron |
TAACATAGAGTAATTAAATG+TGG | 0.553933 | 8_3:-64762286 | None:intergenic |
TAATTACTCCTATTAGCTTG+AGG | 0.554771 | 8_3:-64762180 | None:intergenic |
TTCTTGGGCCAACTCTAGAC+CGG | 0.555005 | 8_3:-64768490 | None:intergenic |
GATGCAGTTACCGGCTCAAG+TGG | 0.556942 | 8_3:+64762898 | Msa1302220:CDS |
TTGTCCTTCAATATTAACCT+TGG | 0.557383 | 8_3:-64768154 | None:intergenic |
CTTTGTCAAACCTGATTAGA+CGG | 0.559990 | 8_3:-64767137 | None:intergenic |
AAGATGGACAAGAACTCAGA+TGG | 0.560785 | 8_3:+64767521 | Msa1302220:CDS |
TTGTTGGTAGTGATAGAAGA+TGG | 0.561523 | 8_3:-64766326 | None:intergenic |
ACGCCACAACAACCAGCTCT+AGG | 0.562219 | 8_3:-64765615 | None:intergenic |
GGGAATAAGATCATAGTGGT+TGG | 0.563677 | 8_3:+64763211 | Msa1302220:CDS |
GAAGCTAGCCGGTCTAGAGT+TGG | 0.567033 | 8_3:+64768482 | Msa1302220:CDS |
TGGTCAAGAGTAAAGGTTCG+AGG | 0.567595 | 8_3:+64765579 | Msa1302220:CDS |
GATGGCATGGTCAAGAGTAA+AGG | 0.568782 | 8_3:+64765572 | Msa1302220:intron |
AACCAGCTCTAGGTGATGGA+TGG | 0.570411 | 8_3:-64765605 | None:intergenic |
GAAGGGAGACATTGCTTGGG+GGG | 0.571244 | 8_3:-64767457 | None:intergenic |
TATACATTGAATCTAGGAGC+GGG | 0.571927 | 8_3:-64763027 | None:intergenic |
TCTAGAGTTGGCCCAAGAAG+AGG | 0.572395 | 8_3:+64768494 | Msa1302220:CDS |
ATTGGAGGGAAAACAGATCC+CGG | 0.572579 | 8_3:+64764035 | Msa1302220:CDS |
GAAGGATAGATAGAACTAAG+AGG | 0.573056 | 8_3:-64769167 | None:intergenic |
CTAAAGATTCCTGCATGCAA+GGG | 0.575942 | 8_3:+64763473 | Msa1302220:CDS |
TGGATTGTTAGATGATGTGC+AGG | 0.577622 | 8_3:+64763249 | Msa1302220:CDS |
TTACTCCTATTAGCTTGAGG+TGG | 0.583113 | 8_3:-64762177 | None:intergenic |
CAACAACCAGCTCTAGGTGA+TGG | 0.583967 | 8_3:-64765609 | None:intergenic |
ATCTAAAACAGCCTTGAGGA+AGG | 0.584324 | 8_3:-64768574 | None:intergenic |
CGACACGAGGAGTTATTGCA+GGG | 0.588443 | 8_3:+64768700 | Msa1302220:CDS |
TGGTCACTCATGGAGGCAAA+GGG | 0.590172 | 8_3:+64764176 | Msa1302220:CDS |
TTGATACAGAAAGTGAGTGC+TGG | 0.592237 | 8_3:+64764156 | Msa1302220:CDS |
CAATGGTCACAGTGTTGTCA+GGG | 0.593372 | 8_3:+64764718 | Msa1302220:CDS |
GTAAAGCTTTGATGTTGCCA+TGG | 0.593853 | 8_3:-64763429 | None:intergenic |
ACATGGTTCAATCTTGGAGA+AGG | 0.593948 | 8_3:-64764980 | None:intergenic |
TTAGCATCTGCAGTTGAACA+TGG | 0.594598 | 8_3:+64767392 | Msa1302220:CDS |
TATTGGGAATAAGATCATAG+TGG | 0.595128 | 8_3:+64763207 | Msa1302220:CDS |
GTACTAAATGGTATATTACA+GGG | 0.598606 | 8_3:+64765646 | Msa1302220:CDS |
GATGAACATTAGTGGAGCCA+AGG | 0.598955 | 8_3:+64768137 | Msa1302220:CDS |
ATTCGAACGTTACGTTAGGT+AGG | 0.605733 | 8_3:-64762100 | None:intergenic |
CTGCTGCTTCGGTTCAACCT+GGG | 0.606041 | 8_3:+64762361 | Msa1302220:five_prime_UTR |
TTACTGCGAGAGAAGCTAGC+CGG | 0.609620 | 8_3:+64768471 | Msa1302220:CDS |
TTGCATGCAGGAATCTTTAG+GGG | 0.610352 | 8_3:-64763470 | None:intergenic |
ATACAATGCAGATGTCAAGA+TGG | 0.612562 | 8_3:+64767505 | Msa1302220:CDS |
ATCAGTACTTGTAGCTCAGG+CGG | 0.612630 | 8_3:+64762964 | Msa1302220:CDS |
AAGCTGAGAGGCTAATCTAG+TGG | 0.613975 | 8_3:-64767324 | None:intergenic |
AATAAGATCATAGTGGTTGG+CGG | 0.614289 | 8_3:+64763214 | Msa1302220:CDS |
GCGATCAAATTGCTTACGAA+GGG | 0.614392 | 8_3:-64767474 | None:intergenic |
AAAAGGCACTTCTCATTGGA+GGG | 0.617797 | 8_3:+64764021 | Msa1302220:CDS |
ATAGATGCAGGACCTTTACT+GGG | 0.619077 | 8_3:-64767278 | None:intergenic |
CGAAGGGAGACATTGCTTGG+GGG | 0.620540 | 8_3:-64767458 | None:intergenic |
TATTGCAGGGGAAAGAGCTA+GGG | 0.628345 | 8_3:+64768713 | Msa1302220:CDS |
CTGTCTATTAACGTGAGCTG+AGG | 0.628586 | 8_3:+64769277 | Msa1302220:three_prime_UTR |
ACGAAGGGAGACATTGCTTG+GGG | 0.632300 | 8_3:-64767459 | None:intergenic |
CAGTTGAACATGGTTCTGGA+AGG | 0.632339 | 8_3:+64767402 | Msa1302220:CDS |
ACAGAATAAAATAATAATGG+TGG | 0.633432 | 8_3:-64762249 | None:intergenic |
CGAGCCGAACGTTGTCAGAG+TGG | 0.638950 | 8_3:-64768539 | None:intergenic |
ACGTTAGGTAGGTAGCAAGA+TGG | 0.644922 | 8_3:-64762089 | None:intergenic |
CTTATTCCCAATAACAGCAG+CGG | 0.650581 | 8_3:-64763197 | None:intergenic |
CGTTCGGCTCGAGCATGACG+TGG | 0.650902 | 8_3:+64768551 | Msa1302220:CDS |
TACTAAATGGTATATTACAG+GGG | 0.654242 | 8_3:+64765647 | Msa1302220:CDS |
TCTTATTTGATATTGTTTGG+GGG | 0.654743 | 8_3:+64764746 | Msa1302220:CDS |
TAGGAGTTGCACTCGACACG+AGG | 0.657321 | 8_3:+64768687 | Msa1302220:intron |
ATCGAACTTCTACTACACCC+AGG | 0.658471 | 8_3:+64768992 | Msa1302220:CDS |
ATCTTCTATCACTACCAACA+AGG | 0.664353 | 8_3:+64766328 | Msa1302220:CDS |
ACATAGAGTAATTAAATGTG+GGG | 0.664772 | 8_3:-64762284 | None:intergenic |
GTATACATTGAATCTAGGAG+CGG | 0.665030 | 8_3:-64763028 | None:intergenic |
TTGGTAGTGATAGAAGATGG+AGG | 0.668670 | 8_3:-64766323 | None:intergenic |
GATTAGTGTAGATAATGAGG+AGG | 0.671629 | 8_3:+64769106 | Msa1302220:three_prime_UTR |
CTGGATAAACAGAGACAGAG+AGG | 0.674018 | 8_3:-64762128 | None:intergenic |
GTAGACGCACCAAATTCGGA+AGG | 0.687181 | 8_3:+64762603 | Msa1302220:CDS |
TGAGTGCTGGTCACTCATGG+AGG | 0.691926 | 8_3:+64764169 | Msa1302220:CDS |
AGTGATGCACTAGAAAGTGA+AGG | 0.692132 | 8_3:+64768222 | Msa1302220:CDS |
TATCATCTAAAACAGCCTTG+AGG | 0.698493 | 8_3:-64768578 | None:intergenic |
TAATGTTCATCAGTTTACGA+CGG | 0.715221 | 8_3:-64768125 | None:intergenic |
ACTAAATGGTATATTACAGG+GGG | 0.716870 | 8_3:+64765648 | Msa1302220:CDS |
GGAACAGTGATTAAGCTGAG+AGG | 0.722001 | 8_3:-64767336 | None:intergenic |
GACACGAGGAGTTATTGCAG+GGG | 0.745141 | 8_3:+64768701 | Msa1302220:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTAATCATTCAAATATTTT+GGG | + | chr8_3:64765908-64765927 | Msa1302220:intron | 10.0% |
!! | AATTAAAGACAAAACAAAAT+TGG | - | chr8_3:64762403-64762422 | None:intergenic | 15.0% |
!! | TTAATTAATTACATTGAGAA+TGG | - | chr8_3:64762770-64762789 | None:intergenic | 15.0% |
!!! | ACTAATTGTTATTGTAAAAT+TGG | + | chr8_3:64762820-64762839 | Msa1302220:intron | 15.0% |
!!! | TTATTTTCTCTTATATAACT+TGG | - | chr8_3:64763750-64763769 | None:intergenic | 15.0% |
!! | AAAATAAAAAGAAAATGACT+GGG | + | chr8_3:64763763-64763782 | Msa1302220:intron | 15.0% |
!!! | ACATTTTAAAAAAGTTAACT+AGG | + | chr8_3:64764388-64764407 | Msa1302220:intron | 15.0% |
!!! | ATTTGAATTTTGAAAAGAAA+AGG | + | chr8_3:64764880-64764899 | Msa1302220:intron | 15.0% |
!! | GATAAAGTTCTTTATATATT+TGG | + | chr8_3:64765019-64765038 | Msa1302220:CDS | 15.0% |
!!! | ATATAAATCATTTAAGGTTT+TGG | - | chr8_3:64765059-64765078 | None:intergenic | 15.0% |
!! | AAGTGAATATAAATCATTTA+AGG | - | chr8_3:64765065-64765084 | None:intergenic | 15.0% |
!! | ATCAAATAATATATAGTGAA+GGG | - | chr8_3:64765528-64765547 | None:intergenic | 15.0% |
!! | TATCAAATAATATATAGTGA+AGG | - | chr8_3:64765529-64765548 | None:intergenic | 15.0% |
!!! | GGTTTAAAATTATTAATGTA+TGG | - | chr8_3:64765716-64765735 | None:intergenic | 15.0% |
!! | TATTTGAATGATTAAAGAAA+TGG | - | chr8_3:64765904-64765923 | None:intergenic | 15.0% |
!!! | CTTTAATCATTCAAATATTT+TGG | + | chr8_3:64765907-64765926 | Msa1302220:intron | 15.0% |
!!! | TGGAGAAATAATATTTTTAA+AGG | + | chr8_3:64765959-64765978 | Msa1302220:intron | 15.0% |
!! | TTACCAAAAAAAGATATTAT+TGG | + | chr8_3:64766084-64766103 | Msa1302220:intron | 15.0% |
!! | TACCAAAAAAAGATATTATT+GGG | + | chr8_3:64766085-64766104 | Msa1302220:intron | 15.0% |
!! | AAAATCTACTTCAATAATAT+TGG | - | chr8_3:64766160-64766179 | None:intergenic | 15.0% |
!! | TTGATATTGTAAAAAATGAA+TGG | + | chr8_3:64766282-64766301 | Msa1302220:CDS | 15.0% |
!!! | AAATAATATTGTTATTACTC+AGG | - | chr8_3:64766978-64766997 | None:intergenic | 15.0% |
!! | ACAGAATAAAATAATAATGG+TGG | - | chr8_3:64762252-64762271 | None:intergenic | 20.0% |
!! | GACACAGAATAAAATAATAA+TGG | - | chr8_3:64762255-64762274 | None:intergenic | 20.0% |
!! | AACATAGAGTAATTAAATGT+GGG | - | chr8_3:64762288-64762307 | None:intergenic | 20.0% |
!! | TAACATAGAGTAATTAAATG+TGG | - | chr8_3:64762289-64762308 | None:intergenic | 20.0% |
!! | ACAATAACAATTAGTAAAGT+TGG | - | chr8_3:64762815-64762834 | None:intergenic | 20.0% |
!!! | TATGAGTTGAGAAATTTAAT+GGG | - | chr8_3:64763626-64763645 | None:intergenic | 20.0% |
!!! | TTATGAGTTGAGAAATTTAA+TGG | - | chr8_3:64763627-64763646 | None:intergenic | 20.0% |
!! | GAAAATAAAAAGAAAATGAC+TGG | + | chr8_3:64763762-64763781 | Msa1302220:intron | 20.0% |
!! | AAAGTTCTTTATATATTTGG+AGG | + | chr8_3:64765022-64765041 | Msa1302220:CDS | 20.0% |
!! | TTGTATCTTTACTATATTAG+TGG | + | chr8_3:64765124-64765143 | Msa1302220:intron | 20.0% |
!! | TCAAATAATATATAGTGAAG+GGG | - | chr8_3:64765527-64765546 | None:intergenic | 20.0% |
!!! | TATTATTTCTCCAATTCTAA+AGG | - | chr8_3:64765952-64765971 | None:intergenic | 20.0% |
!! | TTTAAAGGAAAATTAGTTAC+AGG | + | chr8_3:64765974-64765993 | Msa1302220:intron | 20.0% |
!! | TTAAAGGAAAATTAGTTACA+GGG | + | chr8_3:64765975-64765994 | Msa1302220:intron | 20.0% |
!!! | TTGGGAAGTAAAATTTTATT+GGG | + | chr8_3:64766058-64766077 | Msa1302220:intron | 20.0% |
!!! | GATTTTATTTTAGTCAGTAT+TGG | + | chr8_3:64766174-64766193 | Msa1302220:intron | 20.0% |
!! | TTTGTTTATAAATTGTGCTA+TGG | + | chr8_3:64766200-64766219 | Msa1302220:intron | 20.0% |
!! | TTAGTTATTGTGTTAATTGA+TGG | + | chr8_3:64766399-64766418 | Msa1302220:intron | 20.0% |
!! | AACTAAAGAGTTATATTTGA+AGG | - | chr8_3:64766473-64766492 | None:intergenic | 20.0% |
!! | TTATTCATTTACTACAATAG+AGG | + | chr8_3:64766507-64766526 | Msa1302220:intron | 20.0% |
!! | ACATCATATTGTAAAAATGA+GGG | - | chr8_3:64766882-64766901 | None:intergenic | 20.0% |
!! | AACATCATATTGTAAAAATG+AGG | - | chr8_3:64766883-64766902 | None:intergenic | 20.0% |
!! | CTAACATCAATAAAGAAAAA+AGG | - | chr8_3:64767571-64767590 | None:intergenic | 20.0% |
!! | ACATGCATAAATATTAGATA+AGG | + | chr8_3:64767727-64767746 | Msa1302220:intron | 20.0% |
!! | ATGACCAAAAAAATGAAAAA+AGG | + | chr8_3:64767810-64767829 | Msa1302220:intron | 20.0% |
!! | GAATCCTATTAAAGAAAATA+CGG | - | chr8_3:64767922-64767941 | None:intergenic | 20.0% |
!! | ACTTCTTAATATGTTATTAG+TGG | - | chr8_3:64769219-64769238 | None:intergenic | 20.0% |
! | ACATAGAGTAATTAAATGTG+GGG | - | chr8_3:64762287-64762306 | None:intergenic | 25.0% |
! | ATTACATTGAGAATGGAATT+TGG | - | chr8_3:64762763-64762782 | None:intergenic | 25.0% |
! | CATTATCAATTTCATGAGAA+TGG | - | chr8_3:64762924-64762943 | None:intergenic | 25.0% |
!! | TTTTGCCAACTATTATTGTT+TGG | + | chr8_3:64763066-64763085 | Msa1302220:intron | 25.0% |
! | ATAATGTGGTTATTCACATA+AGG | - | chr8_3:64763660-64763679 | None:intergenic | 25.0% |
! | TCACTAATTGATGAATAATG+TGG | - | chr8_3:64763674-64763693 | None:intergenic | 25.0% |
! | TGTGCATGATATAGATATTA+TGG | + | chr8_3:64763694-64763713 | Msa1302220:intron | 25.0% |
! | GTGCATGATATAGATATTAT+GGG | + | chr8_3:64763695-64763714 | Msa1302220:intron | 25.0% |
!!! | TAACGATTTTAACATGTTTG+GGG | - | chr8_3:64763722-64763741 | None:intergenic | 25.0% |
!!! | CTAACGATTTTAACATGTTT+GGG | - | chr8_3:64763723-64763742 | None:intergenic | 25.0% |
!!! | TCTAACGATTTTAACATGTT+TGG | - | chr8_3:64763724-64763743 | None:intergenic | 25.0% |
!! | AGTTGATATTTATGTGTGTT+TGG | + | chr8_3:64763944-64763963 | Msa1302220:intron | 25.0% |
!! | TAATTTTACCAGGTATCTTA+TGG | + | chr8_3:64763996-64764015 | Msa1302220:intron | 25.0% |
!! | AATTTTACCAGGTATCTTAT+GGG | + | chr8_3:64763997-64764016 | Msa1302220:intron | 25.0% |
!! | ATATTTTTCACACATGACAA+AGG | + | chr8_3:64764465-64764484 | Msa1302220:intron | 25.0% |
!! | AGCTCTTATTTGATATTGTT+TGG | + | chr8_3:64764743-64764762 | Msa1302220:CDS | 25.0% |
!! | GCTCTTATTTGATATTGTTT+GGG | + | chr8_3:64764744-64764763 | Msa1302220:CDS | 25.0% |
!! | CTCTTATTTGATATTGTTTG+GGG | + | chr8_3:64764745-64764764 | Msa1302220:CDS | 25.0% |
!! | TCTTATTTGATATTGTTTGG+GGG | + | chr8_3:64764746-64764765 | Msa1302220:CDS | 25.0% |
!!! | GAATTTTGAAAAGAAAAGGT+TGG | + | chr8_3:64764884-64764903 | Msa1302220:intron | 25.0% |
!! | ATTCCTTTTGATCTACTATA+TGG | + | chr8_3:64764940-64764959 | Msa1302220:intron | 25.0% |
! | AATCCATATAGTAGATCAAA+AGG | - | chr8_3:64764946-64764965 | None:intergenic | 25.0% |
!!! | ATTTAAGGTTTTGGATTTTG+AGG | - | chr8_3:64765050-64765069 | None:intergenic | 25.0% |
!! | ATATTCACTTGACTTTGAAA+CGG | + | chr8_3:64765075-64765094 | Msa1302220:CDS | 25.0% |
!! | ATATGTTTCTTTTCTTCAGA+TGG | + | chr8_3:64765554-64765573 | Msa1302220:intron | 25.0% |
! | GTACTAAATGGTATATTACA+GGG | + | chr8_3:64765646-64765665 | Msa1302220:CDS | 25.0% |
! | TACTAAATGGTATATTACAG+GGG | + | chr8_3:64765647-64765666 | Msa1302220:CDS | 25.0% |
! | TTTGGGTCAATTTCAAATAA+AGG | + | chr8_3:64765925-64765944 | Msa1302220:intron | 25.0% |
! | TTGGGTCAATTTCAAATAAA+GGG | + | chr8_3:64765926-64765945 | Msa1302220:intron | 25.0% |
!! | GTTGGGAAGTAAAATTTTAT+TGG | + | chr8_3:64766057-64766076 | Msa1302220:intron | 25.0% |
!!! | GACCCAATAATATCTTTTTT+TGG | - | chr8_3:64766090-64766109 | None:intergenic | 25.0% |
! | TTACTAATAACATTACACCA+AGG | - | chr8_3:64766538-64766557 | None:intergenic | 25.0% |
! | TTGGTGTAATGTTATTAGTA+AGG | + | chr8_3:64766537-64766556 | Msa1302220:intron | 25.0% |
! | AGTAAATGAATGAAAAAGGT+CGG | - | chr8_3:64766688-64766707 | None:intergenic | 25.0% |
! | TTGCAGTAAATGAATGAAAA+AGG | - | chr8_3:64766692-64766711 | None:intergenic | 25.0% |
! | CATCATATTGTAAAAATGAG+GGG | - | chr8_3:64766881-64766900 | None:intergenic | 25.0% |
!!! | ATTTTGTTTCTTGACTTATC+AGG | + | chr8_3:64767202-64767221 | Msa1302220:intron | 25.0% |
!!! | GAGACCTTTTTTCATTTTTT+TGG | - | chr8_3:64767817-64767836 | None:intergenic | 25.0% |
! | ATATCATCTCAAAAGAAACT+GGG | - | chr8_3:64767974-64767993 | None:intergenic | 25.0% |
! | AATATCATCTCAAAAGAAAC+TGG | - | chr8_3:64767975-64767994 | None:intergenic | 25.0% |
! | CTACTTTACTTTCATAGTAT+TGG | - | chr8_3:64768302-64768321 | None:intergenic | 25.0% |
!!! | CATTCCATTTTTCCTTATTA+GGG | - | chr8_3:64768328-64768347 | None:intergenic | 25.0% |
!!! | ACATTCCATTTTTCCTTATT+AGG | - | chr8_3:64768329-64768348 | None:intergenic | 25.0% |
! | AATAAGGAAAAATGGAATGT+TGG | + | chr8_3:64768329-64768348 | Msa1302220:CDS | 25.0% |
! | AATACACTGTTACTAATTGA+AGG | - | chr8_3:64769188-64769207 | None:intergenic | 25.0% |
! | TAATTACTCCTATTAGCTTG+AGG | - | chr8_3:64762183-64762202 | None:intergenic | 30.0% |
TGTAAACTTCAGAATCTTCT+AGG | + | chr8_3:64762460-64762479 | Msa1302220:intron | 30.0% | |
GTAAACTTCAGAATCTTCTA+GGG | + | chr8_3:64762461-64762480 | Msa1302220:intron | 30.0% | |
TAGAAATTACCTTCCGAATT+TGG | - | chr8_3:64762615-64762634 | None:intergenic | 30.0% | |
! | ATGGAATTTGGAATTCGTTT+GGG | - | chr8_3:64762751-64762770 | None:intergenic | 30.0% |
! | AATGGAATTTGGAATTCGTT+TGG | - | chr8_3:64762752-64762771 | None:intergenic | 30.0% |
! | TCAAGTTTTTACCTCATTTC+AGG | + | chr8_3:64762855-64762874 | Msa1302220:intron | 30.0% |
! | CAAGTTTTTACCTCATTTCA+GGG | + | chr8_3:64762856-64762875 | Msa1302220:intron | 30.0% |
TGACAATAATACCCAATTCT+CGG | - | chr8_3:64762992-64763011 | None:intergenic | 30.0% | |
TGGGTATTATTGTCAATTTC+TGG | + | chr8_3:64762997-64763016 | Msa1302220:CDS | 30.0% | |
GAGATGTATACATTGAATCT+AGG | - | chr8_3:64763036-64763055 | None:intergenic | 30.0% | |
TCAGACCAAACAATAATAGT+TGG | - | chr8_3:64763074-64763093 | None:intergenic | 30.0% | |
TATTGGGAATAAGATCATAG+TGG | + | chr8_3:64763207-64763226 | Msa1302220:CDS | 30.0% | |
TTAGTGTCAATGTGTAATTG+TGG | - | chr8_3:64763314-64763333 | None:intergenic | 30.0% | |
!! | TGAATTTTGACACATTTTCG+TGG | + | chr8_3:64763405-64763424 | Msa1302220:CDS | 30.0% |
GGATAATGTTTACCAAACTA+TGG | - | chr8_3:64763499-64763518 | None:intergenic | 30.0% | |
!! | GAGCTTTTTGTTATGGTAAT+TGG | - | chr8_3:64763520-64763539 | None:intergenic | 30.0% |
TCGACAATGAGGAATAAAAT+TGG | + | chr8_3:64763853-64763872 | Msa1302220:intron | 30.0% | |
TACCTGGTAAAATTATCATC+AGG | - | chr8_3:64763991-64764010 | None:intergenic | 30.0% | |
! | TGTTGCTCTGATTATCTTTT+TGG | + | chr8_3:64764115-64764134 | Msa1302220:CDS | 30.0% |
CTACAAACAAAAATTCCTAC+CGG | - | chr8_3:64764209-64764228 | None:intergenic | 30.0% | |
TGGAAATAGAAATTGCTCTA+GGG | + | chr8_3:64764247-64764266 | Msa1302220:intron | 30.0% | |
TGATATAAAGAACAACCACT+AGG | + | chr8_3:64764290-64764309 | Msa1302220:intron | 30.0% | |
! | TTACAAAGCTTTTCATCTAC+TGG | - | chr8_3:64764431-64764450 | None:intergenic | 30.0% |
! | AGATGAAAAGCTTTGTAAGT+TGG | + | chr8_3:64764433-64764452 | Msa1302220:intron | 30.0% |
!!! | TCCATACTGATTTTGATACT+TGG | + | chr8_3:64764634-64764653 | Msa1302220:intron | 30.0% |
TCCAAGTATCAAAATCAGTA+TGG | - | chr8_3:64764638-64764657 | None:intergenic | 30.0% | |
GAGCTTTACATCATATAACT+AGG | + | chr8_3:64764656-64764675 | Msa1302220:intron | 30.0% | |
GTAAAGATACAAGACATATG+AGG | - | chr8_3:64765116-64765135 | None:intergenic | 30.0% | |
TAGTGGTAGAATTCAGTAAA+TGG | + | chr8_3:64765141-64765160 | Msa1302220:intron | 30.0% | |
ATTCAGTAAATGGATGAAGA+AGG | + | chr8_3:64765151-64765170 | Msa1302220:intron | 30.0% | |
AAAACTATCGTATTAGCTAC+TGG | + | chr8_3:64765179-64765198 | Msa1302220:intron | 30.0% | |
AATATGGTTATGTGGAAAGA+GGG | - | chr8_3:64765310-64765329 | None:intergenic | 30.0% | |
ACTTAATCAATTCAGCATCT+CGG | - | chr8_3:64765503-64765522 | None:intergenic | 30.0% | |
GGTACTAAATGGTATATTAC+AGG | + | chr8_3:64765645-64765664 | Msa1302220:CDS | 30.0% | |
ACTAAATGGTATATTACAGG+GGG | + | chr8_3:64765648-64765667 | Msa1302220:CDS | 30.0% | |
! | ACCTACTACTTTCTTTCTTT+TGG | + | chr8_3:64765733-64765752 | Msa1302220:intron | 30.0% |
ACCAAAAGAAAGAAAGTAGT+AGG | - | chr8_3:64765737-64765756 | None:intergenic | 30.0% | |
AACTACTACTTTCTTTCTCT+TGG | + | chr8_3:64765757-64765776 | Msa1302220:intron | 30.0% | |
! | TGTTGTTATGCTTCATTTTC+TGG | + | chr8_3:64765793-64765812 | Msa1302220:intron | 30.0% |
! | GTTGTTATGCTTCATTTTCT+GGG | + | chr8_3:64765794-64765813 | Msa1302220:intron | 30.0% |
!! | AAATAAAGGGCCTTTAGAAT+TGG | + | chr8_3:64765939-64765958 | Msa1302220:intron | 30.0% |
TGATCTGGCTAAAATTTAGT+TGG | + | chr8_3:64766039-64766058 | Msa1302220:intron | 30.0% | |
GATCTGGCTAAAATTTAGTT+GGG | + | chr8_3:64766040-64766059 | Msa1302220:intron | 30.0% | |
ATTGCTTAAACAAAGCCTTA+GGG | + | chr8_3:64766117-64766136 | Msa1302220:intron | 30.0% | |
TGTAAAAAATGAATGGTCTG+TGG | + | chr8_3:64766289-64766308 | Msa1302220:CDS | 30.0% | |
ACAATAGTCAATAGACATGT+TGG | - | chr8_3:64766797-64766816 | None:intergenic | 30.0% | |
! | AGTCTCATTTTCATAGTCAT+AGG | - | chr8_3:64766923-64766942 | None:intergenic | 30.0% |
!! | TTATTTCTAGATGTCTTGCA+TGG | + | chr8_3:64766992-64767011 | Msa1302220:intron | 30.0% |
ATGAAATCTGTTGAATTACC+AGG | + | chr8_3:64767043-64767062 | Msa1302220:intron | 30.0% | |
TGAAATCTGTTGAATTACCA+GGG | + | chr8_3:64767044-64767063 | Msa1302220:intron | 30.0% | |
AGAGCATAAAGTTAATGTTC+TGG | + | chr8_3:64767158-64767177 | Msa1302220:intron | 30.0% | |
!! | AATGTTCTGGTTCATTCTTA+TGG | + | chr8_3:64767171-64767190 | Msa1302220:intron | 30.0% |
!!! | TGCCATGTGTTTTTAAAACA+TGG | + | chr8_3:64767643-64767662 | Msa1302220:intron | 30.0% |
!!! | CACCATGTTTTAAAAACACA+TGG | - | chr8_3:64767648-64767667 | None:intergenic | 30.0% |
! | AAAACATGGTGTCAAACATT+AGG | + | chr8_3:64767657-64767676 | Msa1302220:intron | 30.0% |
AAAACACTAGGATATGTACA+GGG | - | chr8_3:64767689-64767708 | None:intergenic | 30.0% | |
AAAAACACTAGGATATGTAC+AGG | - | chr8_3:64767690-64767709 | None:intergenic | 30.0% | |
GCATGTATATTCAAACATAG+CGG | - | chr8_3:64767713-64767732 | None:intergenic | 30.0% | |
!!! | TTTTTTTGGTCATGAGATGT+GGG | - | chr8_3:64767803-64767822 | None:intergenic | 30.0% |
!!! | ATTTTTTTGGTCATGAGATG+TGG | - | chr8_3:64767804-64767823 | None:intergenic | 30.0% |
TACACACATATGTTATTGTC+TGG | + | chr8_3:64767862-64767881 | Msa1302220:intron | 30.0% | |
TCCTATTAAAGAAAATACGG+CGG | - | chr8_3:64767919-64767938 | None:intergenic | 30.0% | |
! | TTAATGTTCTGCGTAACTTT+TGG | + | chr8_3:64768063-64768082 | Msa1302220:intron | 30.0% |
TAATGTTCATCAGTTTACGA+CGG | - | chr8_3:64768128-64768147 | None:intergenic | 30.0% | |
TTGTCCTTCAATATTAACCT+TGG | - | chr8_3:64768157-64768176 | None:intergenic | 30.0% | |
!!! | GTTTTGTTGATTTGATATCC+CGG | - | chr8_3:64768190-64768209 | None:intergenic | 30.0% |
TTTCCTGAGAATGATAAATC+AGG | + | chr8_3:64768252-64768271 | Msa1302220:CDS | 30.0% | |
ACAGGAAATGGAGAAAAAAT+TGG | + | chr8_3:64768425-64768444 | Msa1302220:CDS | 30.0% | |
GACAATGTTTGATAAGTTGT+TGG | - | chr8_3:64768520-64768539 | None:intergenic | 30.0% | |
!! | TGTTTTAGATGATACACAGA+AGG | + | chr8_3:64768587-64768606 | Msa1302220:CDS | 30.0% |
GAGTGCTTCAAATGAATAAT+GGG | - | chr8_3:64768622-64768641 | None:intergenic | 30.0% | |
! | AGAGTGCTTCAAATGAATAA+TGG | - | chr8_3:64768623-64768642 | None:intergenic | 30.0% |
! | CTTTTATGCATGGTTATTGT+TGG | + | chr8_3:64768647-64768666 | Msa1302220:intron | 30.0% |
!! | GGCTGATAAAATTTTGTTGT+AGG | + | chr8_3:64768668-64768687 | Msa1302220:intron | 30.0% |
! | CAGATTGTGTTTGAGTTTAT+TGG | + | chr8_3:64768815-64768834 | Msa1302220:intron | 30.0% |
TCTGATTAGTGTAGATAATG+AGG | + | chr8_3:64769103-64769122 | Msa1302220:three_prime_UTR | 30.0% | |
! | TTAGCTTGAGGTGGAAAAAA+TGG | - | chr8_3:64762171-64762190 | None:intergenic | 35.0% |
! | TTTTTCCACCTCAAGCTAAT+AGG | + | chr8_3:64762172-64762191 | Msa1302220:five_prime_UTR | 35.0% |
AGAAGAAGAAAGAGAGAGTA+AGG | - | chr8_3:64762493-64762512 | None:intergenic | 35.0% | |
CAAAGCTGTTTGTAGAGTAA+GGG | - | chr8_3:64762530-64762549 | None:intergenic | 35.0% | |
TCAAAGCTGTTTGTAGAGTA+AGG | - | chr8_3:64762531-64762550 | None:intergenic | 35.0% | |
TGAAGTGAAGTGAAGATGTT+TGG | + | chr8_3:64762572-64762591 | Msa1302220:exon | 35.0% | |
GAAGTGAAGTGAAGATGTTT+GGG | + | chr8_3:64762573-64762592 | Msa1302220:exon | 35.0% | |
ATTTGCCTGTCTTAGATTGA+AGG | + | chr8_3:64762678-64762697 | Msa1302220:intron | 35.0% | |
AGTTGGAAGATGAGAAAGAA+AGG | - | chr8_3:64762798-64762817 | None:intergenic | 35.0% | |
!! | TGAGCTACAAGTACTGATAT+TGG | - | chr8_3:64762962-64762981 | None:intergenic | 35.0% |
AATATCAGTACTTGTAGCTC+AGG | + | chr8_3:64762961-64762980 | Msa1302220:CDS | 35.0% | |
TATACATTGAATCTAGGAGC+GGG | - | chr8_3:64763030-64763049 | None:intergenic | 35.0% | |
GTATACATTGAATCTAGGAG+CGG | - | chr8_3:64763031-64763050 | None:intergenic | 35.0% | |
AATAAGATCATAGTGGTTGG+CGG | + | chr8_3:64763214-64763233 | Msa1302220:CDS | 35.0% | |
AATTGTGGACGGTTCTATAT+TGG | - | chr8_3:64763299-64763318 | None:intergenic | 35.0% | |
TGTCAATGTGTAATTGTGGA+CGG | - | chr8_3:64763310-64763329 | None:intergenic | 35.0% | |
!!! | GTCACATCACAGTTTTAGAA+AGG | - | chr8_3:64763347-64763366 | None:intergenic | 35.0% |
! | TCTAAAACTGTGATGTGACA+TGG | + | chr8_3:64763348-64763367 | Msa1302220:intron | 35.0% |
! | TGCTTTTCGTTTTCATTCTC+AGG | + | chr8_3:64763379-64763398 | Msa1302220:intron | 35.0% |
! | AAGAGGAGAGCTTTTTGTTA+TGG | - | chr8_3:64763527-64763546 | None:intergenic | 35.0% |
! | TAAGGGTACATTGAAACAAG+AGG | - | chr8_3:64763544-64763563 | None:intergenic | 35.0% |
AAGGTTAACAAAAGTCAACC+AGG | + | chr8_3:64763802-64763821 | Msa1302220:intron | 35.0% | |
ACAAAAGTCAACCAGGAATA+TGG | + | chr8_3:64763809-64763828 | Msa1302220:intron | 35.0% | |
CAAATATGAACTCGACAATG+AGG | + | chr8_3:64763842-64763861 | Msa1302220:intron | 35.0% | |
! | TGAGGAATAAAATTGGTGTC+AGG | + | chr8_3:64763860-64763879 | Msa1302220:intron | 35.0% |
!! | GAGGAATAAAATTGGTGTCA+GGG | + | chr8_3:64763861-64763880 | Msa1302220:intron | 35.0% |
!! | AGGAATAAAATTGGTGTCAG+GGG | + | chr8_3:64763862-64763881 | Msa1302220:intron | 35.0% |
! | TGCCTGATGATAATTTTACC+AGG | + | chr8_3:64763986-64764005 | Msa1302220:intron | 35.0% |
!!! | TCTTTTTGGTGTTTGCAGTA+TGG | + | chr8_3:64764129-64764148 | Msa1302220:CDS | 35.0% |
!!! | CTTTTTGGTGTTTGCAGTAT+GGG | + | chr8_3:64764130-64764149 | Msa1302220:CDS | 35.0% |
GTGGAAATAGAAATTGCTCT+AGG | + | chr8_3:64764246-64764265 | Msa1302220:intron | 35.0% | |
TACACTAATACACTTCCTAG+TGG | - | chr8_3:64764308-64764327 | None:intergenic | 35.0% | |
AGTTAACTAGGTTACAAGTG+AGG | + | chr8_3:64764400-64764419 | Msa1302220:intron | 35.0% | |
CCTATCAAGAACAAACTCTT+TGG | - | chr8_3:64764691-64764710 | None:intergenic | 35.0% | |
! | CCAAAGAGTTTGTTCTTGAT+AGG | + | chr8_3:64764688-64764707 | Msa1302220:intron | 35.0% |
! | TGATCTACTATATGGATTGC+AGG | + | chr8_3:64764948-64764967 | Msa1302220:intron | 35.0% |
! | GATCTACTATATGGATTGCA+GGG | + | chr8_3:64764949-64764968 | Msa1302220:intron | 35.0% |
! | ATCTACTATATGGATTGCAG+GGG | + | chr8_3:64764950-64764969 | Msa1302220:intron | 35.0% |
! | TTTGAAACGGTAAGTAGTGT+AGG | + | chr8_3:64765088-64765107 | Msa1302220:intron | 35.0% |
GTAAATGGATGAAGAAGGAA+TGG | + | chr8_3:64765156-64765175 | Msa1302220:intron | 35.0% | |
ATGTGGAAAGAGGGAATAAT+AGG | - | chr8_3:64765301-64765320 | None:intergenic | 35.0% | |
GAATATGGTTATGTGGAAAG+AGG | - | chr8_3:64765311-64765330 | None:intergenic | 35.0% | |
GTTTATGTAAGCAAAAGGAG+AGG | - | chr8_3:64765392-64765411 | None:intergenic | 35.0% | |
GGAAGGTTTATGTAAGCAAA+AGG | - | chr8_3:64765397-64765416 | None:intergenic | 35.0% | |
TTTGCTTACATAAACCTTCC+AGG | + | chr8_3:64765397-64765416 | Msa1302220:intron | 35.0% | |
! | ATTTGATAGAGCACTAGATC+AGG | - | chr8_3:64765453-64765472 | None:intergenic | 35.0% |
! | TTTCTTTTCTTCAGATGGCA+TGG | + | chr8_3:64765559-64765578 | Msa1302220:intron | 35.0% |
CAGCAGTAATAAAGTAGTTC+AGG | - | chr8_3:64765838-64765857 | None:intergenic | 35.0% | |
!!! | GGGTTTTGAATTCTGCTTTA+AGG | + | chr8_3:64765995-64766014 | Msa1302220:intron | 35.0% |
!!! | GCTTTAAGGTCTTTTTTCCA+TGG | + | chr8_3:64766009-64766028 | Msa1302220:intron | 35.0% |
GATTGCTTAAACAAAGCCTT+AGG | + | chr8_3:64766116-64766135 | Msa1302220:intron | 35.0% | |
TTGCTTAAACAAAGCCTTAG+GGG | + | chr8_3:64766118-64766137 | Msa1302220:intron | 35.0% | |
!! | TTGTTGGTAGTGATAGAAGA+TGG | - | chr8_3:64766329-64766348 | None:intergenic | 35.0% |
ATCTTCTATCACTACCAACA+AGG | + | chr8_3:64766328-64766347 | Msa1302220:CDS | 35.0% | |
!! | GAGAGGCTATTTCTAAGATT+TGG | - | chr8_3:64766595-64766614 | None:intergenic | 35.0% |
ACCAAAATCTCAAGTTCAGA+AGG | - | chr8_3:64766749-64766768 | None:intergenic | 35.0% | |
!! | GTGCTGCTTAATAAATGAAC+TGG | - | chr8_3:64766956-64766975 | None:intergenic | 35.0% |
AAAGACTACCTTGTTGCATT+TGG | + | chr8_3:64767098-64767117 | Msa1302220:CDS | 35.0% | |
AAGACTACCTTGTTGCATTT+GGG | + | chr8_3:64767099-64767118 | Msa1302220:CDS | 35.0% | |
CTTTGTCAAACCTGATTAGA+CGG | - | chr8_3:64767140-64767159 | None:intergenic | 35.0% | |
! | TTGTTTCTTGACTTATCAGG+TGG | + | chr8_3:64767205-64767224 | Msa1302220:intron | 35.0% |
!! | TTTTCAAGCAGTATAGATGC+AGG | - | chr8_3:64767293-64767312 | None:intergenic | 35.0% |
ATACAATGCAGATGTCAAGA+TGG | + | chr8_3:64767505-64767524 | Msa1302220:CDS | 35.0% | |
GAAAAAAGGTAGTTTACCTG+AGG | - | chr8_3:64767557-64767576 | None:intergenic | 35.0% | |
TTAGCCGTGTATTCTCATTT+AGG | + | chr8_3:64767587-64767606 | Msa1302220:intron | 35.0% | |
TGCTCCTAAATGAGAATACA+CGG | - | chr8_3:64767594-64767613 | None:intergenic | 35.0% | |
! | AAACATAGCGGAAAAACACT+AGG | - | chr8_3:64767701-64767720 | None:intergenic | 35.0% |
!!! | TTTTTTGGTCATGAGATGTG+GGG | - | chr8_3:64767802-64767821 | None:intergenic | 35.0% |
TGTCTGGATTTAACTGCATT+TGG | + | chr8_3:64767878-64767897 | Msa1302220:intron | 35.0% | |
GTCTGGATTTAACTGCATTT+GGG | + | chr8_3:64767879-64767898 | Msa1302220:intron | 35.0% | |
! | GATTTAACTGCATTTGGGTT+GGG | + | chr8_3:64767884-64767903 | Msa1302220:intron | 35.0% |
ATTAAAGAAAATACGGCGGA+GGG | - | chr8_3:64767915-64767934 | None:intergenic | 35.0% | |
TATTAAAGAAAATACGGCGG+AGG | - | chr8_3:64767916-64767935 | None:intergenic | 35.0% | |
! | TCCGCCGTATTTTCTTTAAT+AGG | + | chr8_3:64767915-64767934 | Msa1302220:intron | 35.0% |
CGTAAACTGATGAACATTAG+TGG | + | chr8_3:64768129-64768148 | Msa1302220:CDS | 35.0% | |
GTGCATCACTTTCAAATACT+TGG | - | chr8_3:64768212-64768231 | None:intergenic | 35.0% | |
GATCCTGATTTATCATTCTC+AGG | - | chr8_3:64768258-64768277 | None:intergenic | 35.0% | |
AAGGAAAAATGGAATGTTGG+AGG | + | chr8_3:64768332-64768351 | Msa1302220:CDS | 35.0% | |
AGGAAAAATGGAATGTTGGA+GGG | + | chr8_3:64768333-64768352 | Msa1302220:CDS | 35.0% | |
TTCCATTTCCTTCAATGCAT+CGG | - | chr8_3:64768451-64768470 | None:intergenic | 35.0% | |
! | TATCATCTAAAACAGCCTTG+AGG | - | chr8_3:64768581-64768600 | None:intergenic | 35.0% |
!! | ATTGGTGTTATTTCCCAAAC+TGG | + | chr8_3:64768833-64768852 | Msa1302220:intron | 35.0% |
AACCAGTTCAATAAGTCGAA+AGG | - | chr8_3:64768905-64768924 | None:intergenic | 35.0% | |
CAAACAGAGATTGCAATCTA+TGG | + | chr8_3:64768966-64768985 | Msa1302220:CDS | 35.0% | |
GATTAGTGTAGATAATGAGG+AGG | + | chr8_3:64769106-64769125 | Msa1302220:three_prime_UTR | 35.0% | |
GAAGGATAGATAGAACTAAG+AGG | - | chr8_3:64769170-64769189 | None:intergenic | 35.0% | |
ATTCGAACGTTACGTTAGGT+AGG | - | chr8_3:64762103-64762122 | None:intergenic | 40.0% | |
!! | ATCGATTCGAACGTTACGTT+AGG | - | chr8_3:64762107-64762126 | None:intergenic | 40.0% |
!! | AAAAATGGTGATGGTACTGC+TGG | - | chr8_3:64762156-64762175 | None:intergenic | 40.0% |
TGAGGTGGAAAAAATGGTGA+TGG | - | chr8_3:64762165-64762184 | None:intergenic | 40.0% | |
! | TTACTCCTATTAGCTTGAGG+TGG | - | chr8_3:64762180-64762199 | None:intergenic | 40.0% |
AGAGTAATTAAATGTGGGGC+AGG | - | chr8_3:64762283-64762302 | None:intergenic | 40.0% | |
!! | GAATAGAAGTACTGCTGCTT+CGG | + | chr8_3:64762350-64762369 | Msa1302220:five_prime_UTR | 40.0% |
! | GAAGTTTAGTTTACTCACCC+AGG | - | chr8_3:64762381-64762400 | None:intergenic | 40.0% |
! | CTGAACCTTCAATCTAAGAC+AGG | - | chr8_3:64762686-64762705 | None:intergenic | 40.0% |
CTAGAAGTCCAGTTACTGTT+AGG | + | chr8_3:64762722-64762741 | Msa1302220:CDS | 40.0% | |
TTTACCTCATTTCAGGGAGA+AGG | + | chr8_3:64762862-64762881 | Msa1302220:intron | 40.0% | |
CTTATTCCCAATAACAGCAG+CGG | - | chr8_3:64763200-64763219 | None:intergenic | 40.0% | |
GGGAATAAGATCATAGTGGT+TGG | + | chr8_3:64763211-64763230 | Msa1302220:CDS | 40.0% | |
TGGATTGTTAGATGATGTGC+AGG | + | chr8_3:64763249-64763268 | Msa1302220:CDS | 40.0% | |
TGTTAGATGATGTGCAGGTA+TGG | + | chr8_3:64763254-64763273 | Msa1302220:intron | 40.0% | |
TGTGATGTGACATGGATTCT+TGG | + | chr8_3:64763356-64763375 | Msa1302220:intron | 40.0% | |
! | GTAAAGCTTTGATGTTGCCA+TGG | - | chr8_3:64763432-64763451 | None:intergenic | 40.0% |
TTGCATGCAGGAATCTTTAG+GGG | - | chr8_3:64763473-64763492 | None:intergenic | 40.0% | |
CTTGCATGCAGGAATCTTTA+GGG | - | chr8_3:64763474-64763493 | None:intergenic | 40.0% | |
CTAAAGATTCCTGCATGCAA+GGG | + | chr8_3:64763473-64763492 | Msa1302220:CDS | 40.0% | |
TGTCAAAGACAGTGCAACAA+TGG | - | chr8_3:64763568-64763587 | None:intergenic | 40.0% | |
GGGATTCTTTAATAGCGCAA+AGG | + | chr8_3:64763783-64763802 | Msa1302220:intron | 40.0% | |
GCAACTTTGAACCATATTCC+TGG | - | chr8_3:64763823-64763842 | None:intergenic | 40.0% | |
! | CCTTTTTCCCATAAGATACC+TGG | - | chr8_3:64764007-64764026 | None:intergenic | 40.0% |
CCAGGTATCTTATGGGAAAA+AGG | + | chr8_3:64764004-64764023 | Msa1302220:intron | 40.0% | |
!! | AAAAAGGCACTTCTCATTGG+AGG | + | chr8_3:64764020-64764039 | Msa1302220:CDS | 40.0% |
!! | AAAAGGCACTTCTCATTGGA+GGG | + | chr8_3:64764021-64764040 | Msa1302220:CDS | 40.0% |
! | ACCTGAAATTCTGTCACTTC+CGG | - | chr8_3:64764057-64764076 | None:intergenic | 40.0% |
TTGATACAGAAAGTGAGTGC+TGG | + | chr8_3:64764156-64764175 | Msa1302220:CDS | 40.0% | |
TTGGGGGTGAAAATGCAAAA+AGG | + | chr8_3:64764762-64764781 | Msa1302220:CDS | 40.0% | |
! | TTGATCTCAAGTCGTTGACT+TGG | + | chr8_3:64764810-64764829 | Msa1302220:CDS | 40.0% |
ATCACTTACGTGTAGTGAAG+TGG | - | chr8_3:64764839-64764858 | None:intergenic | 40.0% | |
ACATGGTTCAATCTTGGAGA+AGG | - | chr8_3:64764983-64765002 | None:intergenic | 40.0% | |
GTTGCTACATGGTTCAATCT+TGG | - | chr8_3:64764989-64765008 | None:intergenic | 40.0% | |
CATCATAGAGAGTTGCTACA+TGG | - | chr8_3:64765000-64765019 | None:intergenic | 40.0% | |
TGTTTATGGGAGGGAGAATA+TGG | - | chr8_3:64765326-64765345 | None:intergenic | 40.0% | |
! | CTGTCAAGTTGTTTATGGGA+GGG | - | chr8_3:64765335-64765354 | None:intergenic | 40.0% |
! | CGAGCTGTCAAGTTGTTTAT+GGG | - | chr8_3:64765339-64765358 | None:intergenic | 40.0% |
CCATAAACAACTTGACAGCT+CGG | + | chr8_3:64765337-64765356 | Msa1302220:intron | 40.0% | |
TAAGCAAAAGGAGAGGAACT+GGG | - | chr8_3:64765385-64765404 | None:intergenic | 40.0% | |
AGCATCTCGGACAATTCAAA+AGG | - | chr8_3:64765490-64765509 | None:intergenic | 40.0% | |
! | GCGTTTTGTGTGGTACTAAA+TGG | + | chr8_3:64765634-64765653 | Msa1302220:CDS | 40.0% |
AAATGGTATATTACAGGGGG+TGG | + | chr8_3:64765651-64765670 | Msa1302220:CDS | 40.0% | |
TTCCATGGCACAAAATGATC+TGG | + | chr8_3:64766024-64766043 | Msa1302220:intron | 40.0% | |
!! | TTGGTAGTGATAGAAGATGG+AGG | - | chr8_3:64766326-64766345 | None:intergenic | 40.0% |
AAAAGGAATGAGCACCTTGT+TGG | - | chr8_3:64766345-64766364 | None:intergenic | 40.0% | |
AAATAGCACTAGAGCCAAGT+AGG | - | chr8_3:64766375-64766394 | None:intergenic | 40.0% | |
TTAATAGACGCTCTCATCAG+AGG | + | chr8_3:64766435-64766454 | Msa1302220:intron | 40.0% | |
TTAGTCTCCCTGATTCCATT+TGG | + | chr8_3:64766642-64766661 | Msa1302220:intron | 40.0% | |
! | GCCTTCTGAACTTGAGATTT+TGG | + | chr8_3:64766745-64766764 | Msa1302220:intron | 40.0% |
AGACTACCTTGTTGCATTTG+GGG | + | chr8_3:64767100-64767119 | Msa1302220:CDS | 40.0% | |
!!! | CTGATTAGACGGCTCTTTTT+TGG | - | chr8_3:64767129-64767148 | None:intergenic | 40.0% |
CAAAAAAGAGCCGTCTAATC+AGG | + | chr8_3:64767127-64767146 | Msa1302220:CDS | 40.0% | |
!! | GTTCTGGTTCATTCTTATGG+AGG | + | chr8_3:64767174-64767193 | Msa1302220:intron | 40.0% |
ATAGATGCAGGACCTTTACT+GGG | - | chr8_3:64767281-64767300 | None:intergenic | 40.0% | |
TATAGATGCAGGACCTTTAC+TGG | - | chr8_3:64767282-64767301 | None:intergenic | 40.0% | |
AACAGAGTCAACTAAGCGTT+GGG | - | chr8_3:64767360-64767379 | None:intergenic | 40.0% | |
TTAGCATCTGCAGTTGAACA+TGG | + | chr8_3:64767392-64767411 | Msa1302220:CDS | 40.0% | |
GTAACTGGGATCTACAGATT+CGG | - | chr8_3:64767438-64767457 | None:intergenic | 40.0% | |
GCGATCAAATTGCTTACGAA+GGG | - | chr8_3:64767477-64767496 | None:intergenic | 40.0% | |
AAGATGGACAAGAACTCAGA+TGG | + | chr8_3:64767521-64767540 | Msa1302220:CDS | 40.0% | |
AGATGGAAGTTCTTTACCTC+AGG | + | chr8_3:64767538-64767557 | Msa1302220:CDS | 40.0% | |
! | CCTAATGCTTTAAGTCCAAC+AGG | - | chr8_3:64767617-64767636 | None:intergenic | 40.0% |
! | CCTGTTGGACTTAAAGCATT+AGG | + | chr8_3:64767614-64767633 | Msa1302220:intron | 40.0% |
!! | TTTTTGGTCATGAGATGTGG+GGG | - | chr8_3:64767801-64767820 | None:intergenic | 40.0% |
TGTGTATGTATTTGCCTGTG+TGG | - | chr8_3:64767848-64767867 | None:intergenic | 40.0% | |
GGATTTAACTGCATTTGGGT+TGG | + | chr8_3:64767883-64767902 | Msa1302220:intron | 40.0% | |
!! | CGTAACTTTTGGTGCATTTC+AGG | + | chr8_3:64768074-64768093 | Msa1302220:intron | 40.0% |
!! | AACTTTTGGTGCATTTCAGG+TGG | + | chr8_3:64768077-64768096 | Msa1302220:intron | 40.0% |
GGAGCCAAGGTTAATATTGA+AGG | + | chr8_3:64768150-64768169 | Msa1302220:CDS | 40.0% | |
AGTGATGCACTAGAAAGTGA+AGG | + | chr8_3:64768222-64768241 | Msa1302220:CDS | 40.0% | |
GTAAAGTAGCAGCCCTAATA+AGG | + | chr8_3:64768313-64768332 | Msa1302220:CDS | 40.0% | |
GCAGCCCTAATAAGGAAAAA+TGG | + | chr8_3:64768321-64768340 | Msa1302220:CDS | 40.0% | |
ATCTGTCCATAAAAGCAGAC+AGG | + | chr8_3:64768407-64768426 | Msa1302220:CDS | 40.0% | |
!! | CCATTTCCTGTCTGCTTTTA+TGG | - | chr8_3:64768416-64768435 | None:intergenic | 40.0% |
CCATAAAAGCAGACAGGAAA+TGG | + | chr8_3:64768413-64768432 | Msa1302220:CDS | 40.0% | |
AAAATTGGCCGATGCATTGA+AGG | + | chr8_3:64768440-64768459 | Msa1302220:CDS | 40.0% | |
! | TAAGTTGTTGGCCTCTTCTT+GGG | - | chr8_3:64768508-64768527 | None:intergenic | 40.0% |
! | ATAAGTTGTTGGCCTCTTCT+TGG | - | chr8_3:64768509-64768528 | None:intergenic | 40.0% |
! | ATCTAAAACAGCCTTGAGGA+AGG | - | chr8_3:64768577-64768596 | None:intergenic | 40.0% |
! | CACTCTGATGCTTTTATGCA+TGG | + | chr8_3:64768637-64768656 | Msa1302220:intron | 40.0% |
AACCTAACTCAGACCAGTTT+GGG | - | chr8_3:64768849-64768868 | None:intergenic | 40.0% | |
CAGTTCAATAAGTCGAAAGG+AGG | - | chr8_3:64768902-64768921 | None:intergenic | 40.0% | |
CTCCTTTCGACTTATTGAAC+TGG | + | chr8_3:64768900-64768919 | Msa1302220:intron | 40.0% | |
ACTGGTTGTCATCTCATTGT+TGG | + | chr8_3:64768918-64768937 | Msa1302220:intron | 40.0% | |
CGTGCAGTGAAGTAGATAAT+TGG | + | chr8_3:64769026-64769045 | Msa1302220:exon | 40.0% | |
CAGAAAAACTAGCAACGAAG+TGG | - | chr8_3:64769061-64769080 | None:intergenic | 40.0% | |
ACGTTAGGTAGGTAGCAAGA+TGG | - | chr8_3:64762092-64762111 | None:intergenic | 45.0% | |
CTGGATAAACAGAGACAGAG+AGG | - | chr8_3:64762131-64762150 | None:intergenic | 45.0% | |
CTCTCTGTCTCTGTTTATCC+AGG | + | chr8_3:64762129-64762148 | Msa1302220:five_prime_UTR | 45.0% | |
TCTCGTAGACGCACCAAATT+CGG | + | chr8_3:64762599-64762618 | Msa1302220:CDS | 45.0% | |
AAGGTTCAGCAGCTTTCTGA+TGG | + | chr8_3:64762697-64762716 | Msa1302220:CDS | 45.0% | |
TTGGGATGCCTAACAGTAAC+TGG | - | chr8_3:64762733-64762752 | None:intergenic | 45.0% | |
TTCTCCTTCTCCCTGAAATG+AGG | - | chr8_3:64762869-64762888 | None:intergenic | 45.0% | |
AGGGAGAAGGAGAAGAAGAT+GGG | + | chr8_3:64762875-64762894 | Msa1302220:intron | 45.0% | |
ATCAGTACTTGTAGCTCAGG+CGG | + | chr8_3:64762964-64762983 | Msa1302220:CDS | 45.0% | |
! | TGACACATTTTCGTGGACCA+TGG | + | chr8_3:64763412-64763431 | Msa1302220:CDS | 45.0% |
! | ATCTTTAGGGGCAGACTACT+GGG | - | chr8_3:64763461-64763480 | None:intergenic | 45.0% |
! | AATCTTTAGGGGCAGACTAC+TGG | - | chr8_3:64763462-64763481 | None:intergenic | 45.0% |
CCTTGCATGCAGGAATCTTT+AGG | - | chr8_3:64763475-64763494 | None:intergenic | 45.0% | |
CCTAAAGATTCCTGCATGCA+AGG | + | chr8_3:64763472-64763491 | Msa1302220:CDS | 45.0% | |
GACAGTGCAACAATGGCTAA+GGG | - | chr8_3:64763561-64763580 | None:intergenic | 45.0% | |
AGACAGTGCAACAATGGCTA+AGG | - | chr8_3:64763562-64763581 | None:intergenic | 45.0% | |
!! | GGGAAAAAGGCACTTCTCAT+TGG | + | chr8_3:64764017-64764036 | Msa1302220:CDS | 45.0% |
ATTGGAGGGAAAACAGATCC+CGG | + | chr8_3:64764035-64764054 | Msa1302220:CDS | 45.0% | |
! | CCTGAAATTCTGTCACTTCC+GGG | - | chr8_3:64764056-64764075 | None:intergenic | 45.0% |
TCTTGATAGGTTGCTCGCAA+TGG | + | chr8_3:64764701-64764720 | Msa1302220:intron | 45.0% | |
CAATGGTCACAGTGTTGTCA+GGG | + | chr8_3:64764718-64764737 | Msa1302220:CDS | 45.0% | |
GGGGTGAAAATGCAAAAAGG+AGG | + | chr8_3:64764765-64764784 | Msa1302220:CDS | 45.0% | |
GGAGGGAGAATATGGTTATG+TGG | - | chr8_3:64765318-64765337 | None:intergenic | 45.0% | |
! | GCTGTCAAGTTGTTTATGGG+AGG | - | chr8_3:64765336-64765355 | None:intergenic | 45.0% |
! | CCGAGCTGTCAAGTTGTTTA+TGG | - | chr8_3:64765340-64765359 | None:intergenic | 45.0% |
TGGGGAAGACAAGGAATAAG+GGG | - | chr8_3:64765366-64765385 | None:intergenic | 45.0% | |
CTGGGGAAGACAAGGAATAA+GGG | - | chr8_3:64765367-64765386 | None:intergenic | 45.0% | |
ACTGGGGAAGACAAGGAATA+AGG | - | chr8_3:64765368-64765387 | None:intergenic | 45.0% | |
AAGCAAAAGGAGAGGAACTG+GGG | - | chr8_3:64765384-64765403 | None:intergenic | 45.0% | |
GTAAGCAAAAGGAGAGGAAC+TGG | - | chr8_3:64765386-64765405 | None:intergenic | 45.0% | |
TACATAAACCTTCCAGGCTC+TGG | + | chr8_3:64765403-64765422 | Msa1302220:intron | 45.0% | |
ACATAAACCTTCCAGGCTCT+GGG | + | chr8_3:64765404-64765423 | Msa1302220:intron | 45.0% | |
ATGTGGGTCTGAACTATGCA+AGG | - | chr8_3:64765430-64765449 | None:intergenic | 45.0% | |
! | AGAGCACTAGATCAGGATGT+GGG | - | chr8_3:64765446-64765465 | None:intergenic | 45.0% |
! | TAGAGCACTAGATCAGGATG+TGG | - | chr8_3:64765447-64765466 | None:intergenic | 45.0% |
GATGGCATGGTCAAGAGTAA+AGG | + | chr8_3:64765572-64765591 | Msa1302220:intron | 45.0% | |
TGGTCAAGAGTAAAGGTTCG+AGG | + | chr8_3:64765579-64765598 | Msa1302220:CDS | 45.0% | |
! | AGCCAGATCATTTTGTGCCA+TGG | - | chr8_3:64766029-64766048 | None:intergenic | 45.0% |
AATGCTAACAAGTGCCCCTA+AGG | - | chr8_3:64766135-64766154 | None:intergenic | 45.0% | |
! | TCCTTTTCATGCCACCTACT+TGG | + | chr8_3:64766358-64766377 | Msa1302220:intron | 45.0% |
CTACAATAGAGGCAAAGCCT+TGG | + | chr8_3:64766518-64766537 | Msa1302220:intron | 45.0% | |
ACATGTGATCACCAGGTCTA+AGG | - | chr8_3:64766572-64766591 | None:intergenic | 45.0% | |
GATTTGGACATGTGATCACC+AGG | - | chr8_3:64766579-64766598 | None:intergenic | 45.0% | |
CCTTACTATTGCAAGCAGAG+AGG | - | chr8_3:64766612-64766631 | None:intergenic | 45.0% | |
CCTCTCTGCTTGCAATAGTA+AGG | + | chr8_3:64766609-64766628 | Msa1302220:intron | 45.0% | |
TCTCCCTGATTCCATTTGGT+GGG | + | chr8_3:64766646-64766665 | Msa1302220:intron | 45.0% | |
!! | CTTGGTGCTTGTGCAATACA+AGG | + | chr8_3:64767073-64767092 | Msa1302220:CDS | 45.0% |
GACTACCTTGTTGCATTTGG+GGG | + | chr8_3:64767101-64767120 | Msa1302220:CDS | 45.0% | |
! | GACTTATCAGGTGGAAGTGT+TGG | + | chr8_3:64767214-64767233 | Msa1302220:intron | 45.0% |
!! | TCAGGTGGAAGTGTTGGAAT+TGG | + | chr8_3:64767220-64767239 | Msa1302220:intron | 45.0% |
AGACGTTCAACTCCCAGTAA+AGG | + | chr8_3:64767266-64767285 | Msa1302220:CDS | 45.0% | |
AAGCTGAGAGGCTAATCTAG+TGG | - | chr8_3:64767327-64767346 | None:intergenic | 45.0% | |
GGAACAGTGATTAAGCTGAG+AGG | - | chr8_3:64767339-64767358 | None:intergenic | 45.0% | |
CAACAGAGTCAACTAAGCGT+TGG | - | chr8_3:64767361-64767380 | None:intergenic | 45.0% | |
TCTGCAGTTGAACATGGTTC+TGG | + | chr8_3:64767398-64767417 | Msa1302220:CDS | 45.0% | |
!! | CAGTTGAACATGGTTCTGGA+AGG | + | chr8_3:64767402-64767421 | Msa1302220:CDS | 45.0% |
TACGAAGGGAGACATTGCTT+GGG | - | chr8_3:64767463-64767482 | None:intergenic | 45.0% | |
TTACGAAGGGAGACATTGCT+TGG | - | chr8_3:64767464-64767483 | None:intergenic | 45.0% | |
CGCGATCAAATTGCTTACGA+AGG | - | chr8_3:64767478-64767497 | None:intergenic | 45.0% | |
!! | TCTCATTTAGGAGCACCTGT+TGG | + | chr8_3:64767599-64767618 | Msa1302220:intron | 45.0% |
! | TTTTGGTCATGAGATGTGGG+GGG | - | chr8_3:64767800-64767819 | None:intergenic | 45.0% |
GATGAACATTAGTGGAGCCA+AGG | + | chr8_3:64768137-64768156 | Msa1302220:CDS | 45.0% | |
! | GAAGGACAAGTGTTGTTGTC+CGG | + | chr8_3:64768168-64768187 | Msa1302220:CDS | 45.0% |
! | AAGGACAAGTGTTGTTGTCC+GGG | + | chr8_3:64768169-64768188 | Msa1302220:CDS | 45.0% |
TTGTCCACTCTGACAACGTT+CGG | + | chr8_3:64768535-64768554 | Msa1302220:CDS | 45.0% | |
TTATTGCAGGGGAAAGAGCT+AGG | + | chr8_3:64768712-64768731 | Msa1302220:CDS | 45.0% | |
TATTGCAGGGGAAAGAGCTA+GGG | + | chr8_3:64768713-64768732 | Msa1302220:CDS | 45.0% | |
! | TTCCCAAACTGGTCTGAGTT+AGG | + | chr8_3:64768844-64768863 | Msa1302220:intron | 45.0% |
GAACCTAACTCAGACCAGTT+TGG | - | chr8_3:64768850-64768869 | None:intergenic | 45.0% | |
ATCGAACTTCTACTACACCC+AGG | + | chr8_3:64768992-64769011 | Msa1302220:CDS | 45.0% | |
TGCACGTGAAATGGTTTCCT+GGG | - | chr8_3:64769012-64769031 | None:intergenic | 45.0% | |
CTACTTCACTGCACGTGAAA+TGG | - | chr8_3:64769021-64769040 | None:intergenic | 45.0% | |
CTGTCTATTAACGTGAGCTG+AGG | + | chr8_3:64769277-64769296 | Msa1302220:three_prime_UTR | 45.0% | |
TCTATTAACGTGAGCTGAGG+TGG | + | chr8_3:64769280-64769299 | Msa1302220:three_prime_UTR | 45.0% | |
GTAGACGCACCAAATTCGGA+AGG | + | chr8_3:64762603-64762622 | Msa1302220:CDS | 50.0% | |
CAGGGAGAAGGAGAAGAAGA+TGG | + | chr8_3:64762874-64762893 | Msa1302220:intron | 50.0% | |
GGGAGAAGGAGAAGAAGATG+GGG | + | chr8_3:64762876-64762895 | Msa1302220:intron | 50.0% | |
GAAGATGGGGATGCAGTTAC+CGG | + | chr8_3:64762889-64762908 | Msa1302220:CDS | 50.0% | |
ATGAGAATGGCCACTTGAGC+CGG | - | chr8_3:64762911-64762930 | None:intergenic | 50.0% | |
TAGCATGCCGCTGCTGTTAT+TGG | + | chr8_3:64763190-64763209 | Msa1302220:intron | 50.0% | |
AGCATGCCGCTGCTGTTATT+GGG | + | chr8_3:64763191-64763210 | Msa1302220:intron | 50.0% | |
AAACTATGGCCCTTGCATGC+AGG | - | chr8_3:64763485-64763504 | None:intergenic | 50.0% | |
TGCATGCAAGGGCCATAGTT+TGG | + | chr8_3:64763484-64763503 | Msa1302220:CDS | 50.0% | |
CCCGGAAGTGACAGAATTTC+AGG | + | chr8_3:64764053-64764072 | Msa1302220:CDS | 50.0% | |
!! | AAGTGAGTGCTGGTCACTCA+TGG | + | chr8_3:64764166-64764185 | Msa1302220:CDS | 50.0% |
TGGTCACTCATGGAGGCAAA+GGG | + | chr8_3:64764176-64764195 | Msa1302220:CDS | 50.0% | |
GCAATGGTCACAGTGTTGTC+AGG | + | chr8_3:64764717-64764736 | Msa1302220:CDS | 50.0% | |
! | CTTGACTCGTGAAGAAGCTC+AGG | - | chr8_3:64765217-64765236 | None:intergenic | 50.0% |
TTCCATCCATCACCTAGAGC+TGG | + | chr8_3:64765603-64765622 | Msa1302220:CDS | 50.0% | |
!! | AACCAGCTCTAGGTGATGGA+TGG | - | chr8_3:64765608-64765627 | None:intergenic | 50.0% |
!! | CAACAACCAGCTCTAGGTGA+TGG | - | chr8_3:64765612-64765631 | None:intergenic | 50.0% |
TCACCTAGAGCTGGTTGTTG+TGG | + | chr8_3:64765612-64765631 | Msa1302220:CDS | 50.0% | |
! | GGTTGTTGTGGCGTTTTGTG+TGG | + | chr8_3:64765624-64765643 | Msa1302220:CDS | 50.0% |
GTATTCCCACCTCATTTCCC+AGG | + | chr8_3:64766239-64766258 | Msa1302220:intron | 50.0% | |
CATGTCCTGGGAAATGAGGT+GGG | - | chr8_3:64766247-64766266 | None:intergenic | 50.0% | |
TCTCCATGTCCTGGGAAATG+AGG | - | chr8_3:64766251-64766270 | None:intergenic | 50.0% | |
TCAGAGTCTCTCCATGTCCT+GGG | - | chr8_3:64766259-64766278 | None:intergenic | 50.0% | |
ATCAGAGTCTCTCCATGTCC+TGG | - | chr8_3:64766260-64766279 | None:intergenic | 50.0% | |
GCCAAGTAGGTGGCATGAAA+AGG | - | chr8_3:64766362-64766381 | None:intergenic | 50.0% | |
TAGCACTAGAGCCAAGTAGG+TGG | - | chr8_3:64766372-64766391 | None:intergenic | 50.0% | |
TAGACGCTCTCATCAGAGGA+TGG | + | chr8_3:64766439-64766458 | Msa1302220:intron | 50.0% | |
! | GGTTGTTGTTGCCTTAGACC+TGG | + | chr8_3:64766558-64766577 | Msa1302220:intron | 50.0% |
GTCTCCCTGATTCCATTTGG+TGG | + | chr8_3:64766645-64766664 | Msa1302220:intron | 50.0% | |
GCTCCCACCAAATGGAATCA+GGG | - | chr8_3:64766652-64766671 | None:intergenic | 50.0% | |
TGGATCCCCCAAATGCAACA+AGG | - | chr8_3:64767109-64767128 | None:intergenic | 50.0% | |
ACATTGCTTGGGGGGTAACT+GGG | - | chr8_3:64767452-64767471 | None:intergenic | 50.0% | |
ACGAAGGGAGACATTGCTTG+GGG | - | chr8_3:64767462-64767481 | None:intergenic | 50.0% | |
TGGAATGTTGGAGGGTCAAC+TGG | + | chr8_3:64768341-64768360 | Msa1302220:CDS | 50.0% | |
AAGCAGAGAAGCTGCAGAGA+AGG | + | chr8_3:64768377-64768396 | Msa1302220:CDS | 50.0% | |
AGCAGAGAAGCTGCAGAGAA+GGG | + | chr8_3:64768378-64768397 | Msa1302220:CDS | 50.0% | |
GGCCGATGCATTGAAGGAAA+TGG | + | chr8_3:64768446-64768465 | Msa1302220:CDS | 50.0% | |
TTACTGCGAGAGAAGCTAGC+CGG | + | chr8_3:64768471-64768490 | Msa1302220:CDS | 50.0% | |
TTCTTGGGCCAACTCTAGAC+CGG | - | chr8_3:64768493-64768512 | None:intergenic | 50.0% | |
! | TCTAGAGTTGGCCCAAGAAG+AGG | + | chr8_3:64768494-64768513 | Msa1302220:CDS | 50.0% |
TCGACACGAGGAGTTATTGC+AGG | + | chr8_3:64768699-64768718 | Msa1302220:CDS | 50.0% | |
CGACACGAGGAGTTATTGCA+GGG | + | chr8_3:64768700-64768719 | Msa1302220:CDS | 50.0% | |
GACACGAGGAGTTATTGCAG+GGG | + | chr8_3:64768701-64768720 | Msa1302220:CDS | 50.0% | |
! | AGCTAGGGCATTCCAACTAC+AGG | + | chr8_3:64768728-64768747 | Msa1302220:CDS | 50.0% |
GGGCATTCCAACTACAGGTA+CGG | + | chr8_3:64768733-64768752 | Msa1302220:intron | 50.0% | |
GATGTAGCCGTACCTGTAGT+TGG | - | chr8_3:64768743-64768762 | None:intergenic | 50.0% | |
CTGCACGTGAAATGGTTTCC+TGG | - | chr8_3:64769013-64769032 | None:intergenic | 50.0% | |
! | ACTGCTGCTTCGGTTCAACC+TGG | + | chr8_3:64762360-64762379 | Msa1302220:five_prime_UTR | 55.0% |
! | CTGCTGCTTCGGTTCAACCT+GGG | + | chr8_3:64762361-64762380 | Msa1302220:five_prime_UTR | 55.0% |
!! | GATGCAGTTACCGGCTCAAG+TGG | + | chr8_3:64762898-64762917 | Msa1302220:CDS | 55.0% |
CTCAGGCGGTTCCGAGAATT+GGG | + | chr8_3:64762978-64762997 | Msa1302220:CDS | 55.0% | |
!! | TGAGTGCTGGTCACTCATGG+AGG | + | chr8_3:64764169-64764188 | Msa1302220:CDS | 55.0% |
CTGGTCACTCATGGAGGCAA+AGG | + | chr8_3:64764175-64764194 | Msa1302220:CDS | 55.0% | |
GGAGGCAAAGGGAGACATAC+CGG | + | chr8_3:64764187-64764206 | Msa1302220:CDS | 55.0% | |
GCAAAGGGAGACATACCGGT+AGG | + | chr8_3:64764191-64764210 | Msa1302220:intron | 55.0% | |
AGCTGCGCTACTTCTTAGCG+TGG | + | chr8_3:64764227-64764246 | Msa1302220:intron | 55.0% | |
GAGAGGAACTGGGGAAGACA+AGG | - | chr8_3:64765375-64765394 | None:intergenic | 55.0% | |
ACGCCACAACAACCAGCTCT+AGG | - | chr8_3:64765618-64765637 | None:intergenic | 55.0% | |
CCATGTCCTGGGAAATGAGG+TGG | - | chr8_3:64766248-64766267 | None:intergenic | 55.0% | |
CCACCTCATTTCCCAGGACA+TGG | + | chr8_3:64766245-64766264 | Msa1302220:intron | 55.0% | |
CGCTCCCACCAAATGGAATC+AGG | - | chr8_3:64766653-64766672 | None:intergenic | 55.0% | |
TGCACAACGCTCCCACCAAA+TGG | - | chr8_3:64766660-64766679 | None:intergenic | 55.0% | |
GACATTGCTTGGGGGGTAAC+TGG | - | chr8_3:64767453-64767472 | None:intergenic | 55.0% | |
GAAGGGAGACATTGCTTGGG+GGG | - | chr8_3:64767460-64767479 | None:intergenic | 55.0% | |
CGAAGGGAGACATTGCTTGG+GGG | - | chr8_3:64767461-64767480 | None:intergenic | 55.0% | |
GATGTGGGGGGTAACAAGAC+AGG | - | chr8_3:64767788-64767807 | None:intergenic | 55.0% | |
GGTCTCTCTCTAGTCCACAC+AGG | + | chr8_3:64767831-64767850 | Msa1302220:intron | 55.0% | |
TGCAGCTTCTCTGCTTGCCA+TGG | - | chr8_3:64768373-64768392 | None:intergenic | 55.0% | |
! | GAAGCTAGCCGGTCTAGAGT+TGG | + | chr8_3:64768482-64768501 | Msa1302220:CDS | 55.0% |
TAGGAGTTGCACTCGACACG+AGG | + | chr8_3:64768687-64768706 | Msa1302220:intron | 55.0% | |
! | GGTGATGGTACTGCTGGTCC+TGG | - | chr8_3:64762150-64762169 | None:intergenic | 60.0% |
GCTCAGGCGGTTCCGAGAAT+TGG | + | chr8_3:64762977-64762996 | Msa1302220:CDS | 60.0% | |
GTTGGCGGTGAGTCTGCTAC+TGG | + | chr8_3:64763229-64763248 | Msa1302220:CDS | 60.0% | |
ACTATGCAAGGCCCAGAGCC+TGG | - | chr8_3:64765418-64765437 | None:intergenic | 60.0% | |
GGGTCAACTGGCAGCTTCCA+TGG | + | chr8_3:64768353-64768372 | Msa1302220:CDS | 60.0% | |
CGAGCCGAACGTTGTCAGAG+TGG | - | chr8_3:64768542-64768561 | None:intergenic | 60.0% | |
GCATGACGTGGCCTTCCTCA+AGG | + | chr8_3:64768563-64768582 | Msa1302220:CDS | 60.0% | |
TGCAAGGCCCAGAGCCTGGA+AGG | - | chr8_3:64765414-64765433 | None:intergenic | 65.0% | |
! | CGTTCGGCTCGAGCATGACG+TGG | + | chr8_3:64768551-64768570 | Msa1302220:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 64762071 | 64769330 | 64762071 | ID=Msa1302220;Name=Msa1302220 |
chr8_3 | mRNA | 64762071 | 64769330 | 64762071 | ID=Msa1302220-mRNA-1;Parent=Msa1302220;Name=Msa1302220-mRNA-1;_AED=0.10;_eAED=0.10;_QI=427|1|0.93|1|0.93|0.87|16|295|741 |
chr8_3 | exon | 64762071 | 64762382 | 64762071 | ID=Msa1302220-mRNA-1:exon:19527;Parent=Msa1302220-mRNA-1 |
chr8_3 | exon | 64762472 | 64762624 | 64762472 | ID=Msa1302220-mRNA-1:exon:19528;Parent=Msa1302220-mRNA-1 |
chr8_3 | exon | 64762693 | 64762777 | 64762693 | ID=Msa1302220-mRNA-1:exon:19529;Parent=Msa1302220-mRNA-1 |
chr8_3 | exon | 64762877 | 64763044 | 64762877 | ID=Msa1302220-mRNA-1:exon:19530;Parent=Msa1302220-mRNA-1 |
chr8_3 | exon | 64763193 | 64763270 | 64763193 | ID=Msa1302220-mRNA-1:exon:19531;Parent=Msa1302220-mRNA-1 |
chr8_3 | exon | 64763401 | 64763505 | 64763401 | ID=Msa1302220-mRNA-1:exon:19532;Parent=Msa1302220-mRNA-1 |
chr8_3 | exon | 64764008 | 64764208 | 64764008 | ID=Msa1302220-mRNA-1:exon:19533;Parent=Msa1302220-mRNA-1 |
chr8_3 | exon | 64764710 | 64764849 | 64764710 | ID=Msa1302220-mRNA-1:exon:19534;Parent=Msa1302220-mRNA-1 |
chr8_3 | exon | 64764970 | 64765096 | 64764970 | ID=Msa1302220-mRNA-1:exon:19535;Parent=Msa1302220-mRNA-1 |
chr8_3 | exon | 64765573 | 64765687 | 64765573 | ID=Msa1302220-mRNA-1:exon:19536;Parent=Msa1302220-mRNA-1 |
chr8_3 | exon | 64766261 | 64766349 | 64766261 | ID=Msa1302220-mRNA-1:exon:19537;Parent=Msa1302220-mRNA-1 |
chr8_3 | exon | 64767065 | 64767148 | 64767065 | ID=Msa1302220-mRNA-1:exon:19538;Parent=Msa1302220-mRNA-1 |
chr8_3 | exon | 64767224 | 64767559 | 64767224 | ID=Msa1302220-mRNA-1:exon:19539;Parent=Msa1302220-mRNA-1 |
chr8_3 | exon | 64768096 | 64768608 | 64768096 | ID=Msa1302220-mRNA-1:exon:19540;Parent=Msa1302220-mRNA-1 |
chr8_3 | exon | 64768690 | 64768749 | 64768690 | ID=Msa1302220-mRNA-1:exon:19541;Parent=Msa1302220-mRNA-1 |
chr8_3 | exon | 64768949 | 64769330 | 64768949 | ID=Msa1302220-mRNA-1:exon:19542;Parent=Msa1302220-mRNA-1 |
chr8_3 | five_prime_UTR | 64762071 | 64762382 | 64762071 | ID=Msa1302220-mRNA-1:five_prime_utr;Parent=Msa1302220-mRNA-1 |
chr8_3 | five_prime_UTR | 64762472 | 64762586 | 64762472 | ID=Msa1302220-mRNA-1:five_prime_utr;Parent=Msa1302220-mRNA-1 |
chr8_3 | CDS | 64762587 | 64762624 | 64762587 | ID=Msa1302220-mRNA-1:cds;Parent=Msa1302220-mRNA-1 |
chr8_3 | CDS | 64762693 | 64762777 | 64762693 | ID=Msa1302220-mRNA-1:cds;Parent=Msa1302220-mRNA-1 |
chr8_3 | CDS | 64762877 | 64763044 | 64762877 | ID=Msa1302220-mRNA-1:cds;Parent=Msa1302220-mRNA-1 |
chr8_3 | CDS | 64763193 | 64763270 | 64763193 | ID=Msa1302220-mRNA-1:cds;Parent=Msa1302220-mRNA-1 |
chr8_3 | CDS | 64763401 | 64763505 | 64763401 | ID=Msa1302220-mRNA-1:cds;Parent=Msa1302220-mRNA-1 |
chr8_3 | CDS | 64764008 | 64764208 | 64764008 | ID=Msa1302220-mRNA-1:cds;Parent=Msa1302220-mRNA-1 |
chr8_3 | CDS | 64764710 | 64764849 | 64764710 | ID=Msa1302220-mRNA-1:cds;Parent=Msa1302220-mRNA-1 |
chr8_3 | CDS | 64764970 | 64765096 | 64764970 | ID=Msa1302220-mRNA-1:cds;Parent=Msa1302220-mRNA-1 |
chr8_3 | CDS | 64765573 | 64765687 | 64765573 | ID=Msa1302220-mRNA-1:cds;Parent=Msa1302220-mRNA-1 |
chr8_3 | CDS | 64766261 | 64766349 | 64766261 | ID=Msa1302220-mRNA-1:cds;Parent=Msa1302220-mRNA-1 |
chr8_3 | CDS | 64767065 | 64767148 | 64767065 | ID=Msa1302220-mRNA-1:cds;Parent=Msa1302220-mRNA-1 |
chr8_3 | CDS | 64767224 | 64767559 | 64767224 | ID=Msa1302220-mRNA-1:cds;Parent=Msa1302220-mRNA-1 |
chr8_3 | CDS | 64768096 | 64768608 | 64768096 | ID=Msa1302220-mRNA-1:cds;Parent=Msa1302220-mRNA-1 |
chr8_3 | CDS | 64768690 | 64768749 | 64768690 | ID=Msa1302220-mRNA-1:cds;Parent=Msa1302220-mRNA-1 |
chr8_3 | CDS | 64768949 | 64769035 | 64768949 | ID=Msa1302220-mRNA-1:cds;Parent=Msa1302220-mRNA-1 |
chr8_3 | three_prime_UTR | 64769036 | 64769330 | 64769036 | ID=Msa1302220-mRNA-1:three_prime_utr;Parent=Msa1302220-mRNA-1 |
Gene Sequence |
Protein sequence |