Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302440 | sp|Q14684|RRP1B_HUMAN | 34.896 | 192 | 113 | 5 | 1 | 187 | 1 | 185 | 3.14e-28 | 122 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302440 | G7JKJ1 | 90.659 | 546 | 14 | 1 | 1 | 509 | 1 | 546 | 0.0 | 979 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1302440 | Msa1437860 | 0.815346 | 9.691807e-52 | -8.615850e-47 |
| Msa1209200 | Msa1302440 | 0.801989 | 6.939583e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302440 | MtrunA17_Chr4g0075741 | 90.659 | 546 | 14 | 1 | 1 | 509 | 1 | 546 | 0.0 | 979 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302440 | AT5G20600.1 | 45.304 | 543 | 229 | 12 | 2 | 503 | 13 | 528 | 6.35e-137 | 406 |
Find 114 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCTTCTCAAACTGCTTT+TGG | 0.155542 | 8_3:+65021467 | None:intergenic |
| GAATAAGAATTCGTGGGATT+TGG | 0.238732 | 8_3:-65022263 | Msa1302440:CDS |
| GAGAAGGATGCTGTTAATTC+AGG | 0.240790 | 8_3:-65021802 | Msa1302440:CDS |
| TTCTGCTCCTGATTGTGTTC+AGG | 0.242420 | 8_3:-65021872 | Msa1302440:CDS |
| TGATGGTGATGTTGTGAATT+TGG | 0.255461 | 8_3:-65021944 | Msa1302440:CDS |
| CTGTTTGAGTGCACTTCCTC+TGG | 0.264276 | 8_3:+65021168 | None:intergenic |
| TTCTGTTGACAAAGTGAAAA+AGG | 0.295604 | 8_3:-65021644 | Msa1302440:CDS |
| ATAAATTCTATCTTCTTATT+CGG | 0.322783 | 8_3:-65022315 | Msa1302440:CDS |
| TCTAAAACACTCACCTTAAC+AGG | 0.323131 | 8_3:+65022112 | None:intergenic |
| AGAAACATCCCCGGCAGCTT+TGG | 0.340486 | 8_3:+65021396 | None:intergenic |
| TGCTTCCAAGTTGTTTGAGT+TGG | 0.341408 | 8_3:-65021896 | Msa1302440:CDS |
| GCCGGTAGAAGGACAATAAT+TGG | 0.345439 | 8_3:-65021082 | Msa1302440:CDS |
| AAGAATGATGCCAATGAAAA+TGG | 0.357703 | 8_3:-65021541 | Msa1302440:CDS |
| TCAACAATGGGAACCAAATC+TGG | 0.360558 | 8_3:+65021730 | None:intergenic |
| CAGAGGAAGTGCACTCAAAC+AGG | 0.360720 | 8_3:-65021167 | Msa1302440:CDS |
| GGTTGCTGCGGAAGCAGGTT+TGG | 0.366574 | 8_3:-65021449 | Msa1302440:CDS |
| CTATTCCCCTGAACACAATC+AGG | 0.369072 | 8_3:+65021865 | None:intergenic |
| TTCGAGTGATAAGTTGTTGC+AGG | 0.370155 | 8_3:-65022194 | Msa1302440:CDS |
| GAAACATCCCCGGCAGCTTT+GGG | 0.374968 | 8_3:+65021397 | None:intergenic |
| TGGAGAGGCATCTCTCTGAT+TGG | 0.378842 | 8_3:+65021130 | None:intergenic |
| CGATTCCTGATTCTGTTGAT+CGG | 0.380518 | 8_3:-65021768 | Msa1302440:CDS |
| GCTTCCAAGTTGTTTGAGTT+GGG | 0.382704 | 8_3:-65021895 | Msa1302440:CDS |
| GAAGAAATTAAGATCTCTTT+CGG | 0.384532 | 8_3:-65021035 | Msa1302440:CDS |
| AGATGAATTCTGCTGAGAAC+GGG | 0.385045 | 8_3:-65021567 | Msa1302440:CDS |
| TGATGAGGAAGTGCCAGATT+TGG | 0.395628 | 8_3:-65021743 | Msa1302440:CDS |
| GGAACGATTGCGTTGGGGAT+GGG | 0.405554 | 8_3:-65021922 | Msa1302440:CDS |
| GGGAACGATTGCGTTGGGGA+TGG | 0.411914 | 8_3:-65021923 | Msa1302440:CDS |
| GATGGTGATGTTGTGAATTT+GGG | 0.412750 | 8_3:-65021943 | Msa1302440:CDS |
| GATGCCTCTCCAAAACAAAA+AGG | 0.414704 | 8_3:-65021119 | Msa1302440:CDS |
| AACTGAAGAAAGCCGGTAGA+AGG | 0.416647 | 8_3:-65021093 | Msa1302440:CDS |
| TAAAGTGATTGTGAATTGTT+TGG | 0.417412 | 8_3:-65022233 | Msa1302440:CDS |
| TCTGCTCCTGATTGTGTTCA+GGG | 0.418605 | 8_3:-65021871 | Msa1302440:CDS |
| TCAACCCGATCAACAGAATC+AGG | 0.419304 | 8_3:+65021763 | None:intergenic |
| AAGAAGAGTGGTGGGGATGA+AGG | 0.435846 | 8_3:-65021970 | Msa1302440:CDS |
| TTGGCATCTTCTTCAGGAAG+TGG | 0.441094 | 8_3:+65022523 | None:intergenic |
| GATTCCTGATTCTGTTGATC+GGG | 0.442729 | 8_3:-65021767 | Msa1302440:CDS |
| GAGAAGGTTGCTGCGGAAGC+AGG | 0.443225 | 8_3:-65021454 | Msa1302440:CDS |
| CGCTTATGAATAAGAATTCG+TGG | 0.449006 | 8_3:-65022270 | Msa1302440:CDS |
| ACCAATTATTGTCCTTCTAC+CGG | 0.453957 | 8_3:+65021081 | None:intergenic |
| AATGAGTGAACGGCCAGCTT+CGG | 0.455855 | 8_3:+65022630 | None:intergenic |
| CTCAAGCTCTGAGGAGGTAA+AGG | 0.457744 | 8_3:+65021211 | None:intergenic |
| AGAAGGATGCTGTTAATTCA+GGG | 0.458665 | 8_3:-65021801 | Msa1302440:CDS |
| TCAAACTCGTCTTAAAATCA+TGG | 0.461781 | 8_3:-65022564 | Msa1302440:CDS |
| GGTGGGGATGAAGGTGGTGA+TGG | 0.462518 | 8_3:-65021961 | Msa1302440:CDS |
| GACTGTGTGGCTTCCATACC+AGG | 0.463504 | 8_3:+65021233 | None:intergenic |
| TGTTTGAGTGCACTTCCTCT+GGG | 0.473485 | 8_3:+65021169 | None:intergenic |
| GCGACAAACGCATCCGAAGC+TGG | 0.474678 | 8_3:-65022643 | Msa1302440:CDS |
| GATAAGTTGTTGCAGGGAAA+AGG | 0.474867 | 8_3:-65022187 | Msa1302440:CDS |
| TGTTAATTATCATGTTGCTT+CGG | 0.480010 | 8_3:-65022164 | Msa1302440:CDS |
| AATTTGGGAACGATTGCGTT+GGG | 0.487276 | 8_3:-65021928 | Msa1302440:CDS |
| TCCTCACTATGCGTCGCGAA+TGG | 0.487903 | 8_3:-65022363 | Msa1302440:CDS |
| CTCACCTTAACAGGAAGAAA+AGG | 0.488943 | 8_3:+65022121 | None:intergenic |
| AAGAGAACTAAGAATTCTAA+AGG | 0.489638 | 8_3:-65021364 | Msa1302440:CDS |
| GTGCTACACCCAAAGCTGCC+GGG | 0.499237 | 8_3:-65021405 | Msa1302440:CDS |
| TCAGCATCAACCTCAACAAT+GGG | 0.503809 | 8_3:+65021718 | None:intergenic |
| TGTGCTACACCCAAAGCTGC+CGG | 0.508668 | 8_3:-65021406 | Msa1302440:CDS |
| CTCAAACAGGGTGTACCTCC+AGG | 0.514162 | 8_3:-65021154 | Msa1302440:CDS |
| GAAGAATGGGAAGAAGTTGT+TGG | 0.518060 | 8_3:-65021998 | Msa1302440:intron |
| AAATGCAAGAAGGAGAAGAA+AGG | 0.526369 | 8_3:-65021667 | Msa1302440:CDS |
| TTCTTCATGCGCTTGACAGA+TGG | 0.526672 | 8_3:+65021052 | None:intergenic |
| GGCATCTCTCTGATTGGACC+TGG | 0.532120 | 8_3:+65021136 | None:intergenic |
| GAGATGAATTCTGCTGAGAA+CGG | 0.533402 | 8_3:-65021568 | Msa1302440:CDS |
| TTCTAAAGGAAAGACATCTC+AGG | 0.538949 | 8_3:-65021350 | Msa1302440:CDS |
| ATCAGCATCAACCTCAACAA+TGG | 0.543387 | 8_3:+65021717 | None:intergenic |
| GGTCCGGTATCGATGCTTTG+AGG | 0.546353 | 8_3:-65022342 | Msa1302440:CDS |
| GCGGAAGCAGGTTTGGAAGA+CGG | 0.548014 | 8_3:-65021442 | Msa1302440:CDS |
| AGATTTGGTTCCCATTGTTG+AGG | 0.558856 | 8_3:-65021728 | Msa1302440:CDS |
| TGGGGATAAAAGCTCAAAGA+AGG | 0.560037 | 8_3:-65021278 | Msa1302440:CDS |
| ACTATGCGTCGCGAATGGTC+CGG | 0.562666 | 8_3:-65022358 | Msa1302440:CDS |
| GCTTATGAATAAGAATTCGT+GGG | 0.567848 | 8_3:-65022269 | Msa1302440:CDS |
| TAACCTCAAAGCATCGATAC+CGG | 0.568245 | 8_3:+65022339 | None:intergenic |
| TGGAGATGAAGAAGAGTGGT+GGG | 0.569039 | 8_3:-65021978 | Msa1302440:CDS |
| GAGGTTCGAAATCACACTCT+CGG | 0.570687 | 8_3:+65021489 | None:intergenic |
| CGAGTTGTTTAATGAGTGAA+CGG | 0.572269 | 8_3:+65022620 | None:intergenic |
| GATGCTGATGTTGTTCAGAA+TGG | 0.576099 | 8_3:-65021703 | Msa1302440:CDS |
| CTGCTCCTGATTGTGTTCAG+GGG | 0.582194 | 8_3:-65021870 | Msa1302440:CDS |
| TGGAAATTCAATTGATGAGG+TGG | 0.584323 | 8_3:-65021518 | Msa1302440:CDS |
| TGCTACACCCAAAGCTGCCG+GGG | 0.586441 | 8_3:-65021404 | Msa1302440:CDS |
| AATCTGCAGTAGCAAAGAGT+GGG | 0.587898 | 8_3:-65021297 | Msa1302440:CDS |
| CCTCCAAAAGCAGTTTGAGA+AGG | 0.589423 | 8_3:-65021470 | Msa1302440:CDS |
| AAGAGTGGTGGGGATGAAGG+TGG | 0.589968 | 8_3:-65021967 | Msa1302440:CDS |
| AGAACCCAACTCAAACAACT+TGG | 0.591735 | 8_3:+65021891 | None:intergenic |
| AAATACTGAACGGTGAATGA+AGG | 0.593424 | 8_3:+65022397 | None:intergenic |
| TTCTGTTGATCGGGTTGATG+AGG | 0.594202 | 8_3:-65021758 | Msa1302440:CDS |
| TCGAGTGATAAGTTGTTGCA+GGG | 0.594628 | 8_3:-65022193 | Msa1302440:CDS |
| AAGGCGAAACTGAAGAAAGC+CGG | 0.596950 | 8_3:-65021100 | Msa1302440:CDS |
| CTTCCTCTGGGTGTAACAGA+GGG | 0.600725 | 8_3:+65021181 | None:intergenic |
| TCTCTTCTTAGAAACATCCC+CGG | 0.606700 | 8_3:+65021387 | None:intergenic |
| ACCATTCGCGACGCATAGTG+AGG | 0.607179 | 8_3:+65022362 | None:intergenic |
| GAATCTGCAGTAGCAAAGAG+TGG | 0.610934 | 8_3:-65021298 | Msa1302440:CDS |
| TTGGAGATGAAGAAGAGTGG+TGG | 0.613147 | 8_3:-65021979 | Msa1302440:CDS |
| GAATTTGGGAACGATTGCGT+TGG | 0.613825 | 8_3:-65021929 | Msa1302440:CDS |
| ATGAGGTCAGCTTGAACGAG+AGG | 0.617288 | 8_3:+65022454 | None:intergenic |
| CCTCTGGGTGTAACAGAGGG+AGG | 0.624057 | 8_3:+65021184 | None:intergenic |
| GTTGCTGAAGAAATGCAAGA+AGG | 0.626289 | 8_3:-65021677 | Msa1302440:CDS |
| GGAATTCTCAAGCTCTGAGG+AGG | 0.632414 | 8_3:+65021205 | None:intergenic |
| GAAAGTTGAGAAATACTGAA+CGG | 0.634784 | 8_3:+65022387 | None:intergenic |
| ACTTCCTCTGGGTGTAACAG+AGG | 0.636601 | 8_3:+65021180 | None:intergenic |
| ATCTCTCTGATTGGACCTGG+AGG | 0.637670 | 8_3:+65021139 | None:intergenic |
| GCAGTTTGAGAAGGTTGCTG+CGG | 0.645976 | 8_3:-65021461 | Msa1302440:CDS |
| AATGATGCCAATGAAAATGG+TGG | 0.646819 | 8_3:-65021538 | Msa1302440:CDS |
| TGGTGGAAATTCAATTGATG+AGG | 0.647153 | 8_3:-65021521 | Msa1302440:CDS |
| TTGTTGGAGATGAAGAAGAG+TGG | 0.649135 | 8_3:-65021982 | Msa1302440:CDS |
| GATGAATTCTGCTGAGAACG+GGG | 0.656358 | 8_3:-65021566 | Msa1302440:CDS |
| GGAAGTGGTTGAGATCGAGA+AGG | 0.660667 | 8_3:+65022538 | None:intergenic |
| CCTCCCTCTGTTACACCCAG+AGG | 0.663891 | 8_3:-65021184 | Msa1302440:CDS |
| GGAGGAATTCTCAAGCTCTG+AGG | 0.666968 | 8_3:+65021202 | None:intergenic |
| ATTTGGGAACGATTGCGTTG+GGG | 0.669945 | 8_3:-65021927 | Msa1302440:CDS |
| GTTCTCAGCAGAATTCATCT+CGG | 0.671398 | 8_3:+65021570 | None:intergenic |
| AGAGGAAGTGCACTCAAACA+GGG | 0.678015 | 8_3:-65021166 | Msa1302440:CDS |
| GGAGATGAAGAAGAGTGGTG+GGG | 0.682999 | 8_3:-65021977 | Msa1302440:CDS |
| ATCTGCAGTAGCAAAGAGTG+GGG | 0.689092 | 8_3:-65021296 | Msa1302440:CDS |
| GCGAAGCGAGACGATCGATG+AGG | 0.701289 | 8_3:+65022437 | None:intergenic |
| TGAGGAGGTAAAGGACTGTG+TGG | 0.701475 | 8_3:+65021220 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTCTATCTTCTTATT+CGG | - | chr8_3:65021361-65021380 | Msa1302440:CDS | 15.0% |
| !! | ATAAATTCTATCTTCTTATT+CGG | - | chr8_3:65021361-65021380 | Msa1302440:CDS | 15.0% |
| ! | TAAAGTGATTGTGAATTGTT+TGG | - | chr8_3:65021443-65021462 | Msa1302440:CDS | 25.0% |
| !! | TGTTAATTATCATGTTGCTT+CGG | - | chr8_3:65021512-65021531 | Msa1302440:CDS | 25.0% |
| ! | AAGAGAACTAAGAATTCTAA+AGG | - | chr8_3:65022312-65022331 | Msa1302440:CDS | 25.0% |
| !! | ATTTTCCATGAAAAATAACC+TGG | - | chr8_3:65022425-65022444 | Msa1302440:CDS | 25.0% |
| ! | GAAGAAATTAAGATCTCTTT+CGG | - | chr8_3:65022641-65022660 | Msa1302440:CDS | 25.0% |
| ! | TAAAGTGATTGTGAATTGTT+TGG | - | chr8_3:65021443-65021462 | Msa1302440:CDS | 25.0% |
| !! | TGTTAATTATCATGTTGCTT+CGG | - | chr8_3:65021512-65021531 | Msa1302440:CDS | 25.0% |
| ! | AAGAGAACTAAGAATTCTAA+AGG | - | chr8_3:65022312-65022331 | Msa1302440:CDS | 25.0% |
| !! | ATTTTCCATGAAAAATAACC+TGG | - | chr8_3:65022425-65022444 | Msa1302440:CDS | 25.0% |
| ! | GAAGAAATTAAGATCTCTTT+CGG | - | chr8_3:65022641-65022660 | Msa1302440:CDS | 25.0% |
| TCAAACTCGTCTTAAAATCA+TGG | - | chr8_3:65021112-65021131 | Msa1302440:CDS | 30.0% | |
| GAAAGTTGAGAAATACTGAA+CGG | + | chr8_3:65021292-65021311 | None:intergenic | 30.0% | |
| ATTCATAAGCGAAAAACTCT+TGG | + | chr8_3:65021397-65021416 | None:intergenic | 30.0% | |
| GCTTATGAATAAGAATTCGT+GGG | - | chr8_3:65021407-65021426 | Msa1302440:CDS | 30.0% | |
| !!! | TTAAGCCTTTTTTACTGTGA+TGG | - | chr8_3:65021595-65021614 | Msa1302440:CDS | 30.0% |
| !!! | TAAGCCTTTTTTACTGTGAT+GGG | - | chr8_3:65021596-65021615 | Msa1302440:CDS | 30.0% |
| TTCTGTTGACAAAGTGAAAA+AGG | - | chr8_3:65022032-65022051 | Msa1302440:intron | 30.0% | |
| AAGAATGATGCCAATGAAAA+TGG | - | chr8_3:65022135-65022154 | Msa1302440:CDS | 30.0% | |
| ! | TGAATTTCCACCATTTTCAT+TGG | + | chr8_3:65022148-65022167 | None:intergenic | 30.0% |
| !!! | TCTCAGGATTTTGATTTGAA+TGG | - | chr8_3:65022342-65022361 | Msa1302440:CDS | 30.0% |
| TCAAACTCGTCTTAAAATCA+TGG | - | chr8_3:65021112-65021131 | Msa1302440:CDS | 30.0% | |
| GAAAGTTGAGAAATACTGAA+CGG | + | chr8_3:65021292-65021311 | None:intergenic | 30.0% | |
| ATTCATAAGCGAAAAACTCT+TGG | + | chr8_3:65021397-65021416 | None:intergenic | 30.0% | |
| GCTTATGAATAAGAATTCGT+GGG | - | chr8_3:65021407-65021426 | Msa1302440:CDS | 30.0% | |
| !!! | TTAAGCCTTTTTTACTGTGA+TGG | - | chr8_3:65021595-65021614 | Msa1302440:CDS | 30.0% |
| !!! | TAAGCCTTTTTTACTGTGAT+GGG | - | chr8_3:65021596-65021615 | Msa1302440:CDS | 30.0% |
| TTCTGTTGACAAAGTGAAAA+AGG | - | chr8_3:65022032-65022051 | Msa1302440:intron | 30.0% | |
| AAGAATGATGCCAATGAAAA+TGG | - | chr8_3:65022135-65022154 | Msa1302440:CDS | 30.0% | |
| ! | TGAATTTCCACCATTTTCAT+TGG | + | chr8_3:65022148-65022167 | None:intergenic | 30.0% |
| !!! | TCTCAGGATTTTGATTTGAA+TGG | - | chr8_3:65022342-65022361 | Msa1302440:CDS | 30.0% |
| CGAGTTGTTTAATGAGTGAA+CGG | + | chr8_3:65021059-65021078 | None:intergenic | 35.0% | |
| ! | AAGGTCTTTTCTACTGTGTT+TGG | - | chr8_3:65021187-65021206 | Msa1302440:CDS | 35.0% |
| AAATACTGAACGGTGAATGA+AGG | + | chr8_3:65021282-65021301 | None:intergenic | 35.0% | |
| CGCTTATGAATAAGAATTCG+TGG | - | chr8_3:65021406-65021425 | Msa1302440:CDS | 35.0% | |
| GAATAAGAATTCGTGGGATT+TGG | - | chr8_3:65021413-65021432 | Msa1302440:CDS | 35.0% | |
| ! | AACACCTTTTCTTCCTGTTA+AGG | - | chr8_3:65021551-65021570 | Msa1302440:CDS | 35.0% |
| ! | TCTAAAACACTCACCTTAAC+AGG | + | chr8_3:65021567-65021586 | None:intergenic | 35.0% |
| !!! | AAGCCTTTTTTACTGTGATG+GGG | - | chr8_3:65021597-65021616 | Msa1302440:CDS | 35.0% |
| TTTCCCCATCACAGTAAAAA+AGG | + | chr8_3:65021603-65021622 | None:intergenic | 35.0% | |
| !!! | TTGCCTGATAAGGTTTTGTT+AGG | - | chr8_3:65021623-65021642 | Msa1302440:CDS | 35.0% |
| !!! | TGCCTGATAAGGTTTTGTTA+GGG | - | chr8_3:65021624-65021643 | Msa1302440:CDS | 35.0% |
| TTCCCTAACAAAACCTTATC+AGG | + | chr8_3:65021629-65021648 | None:intergenic | 35.0% | |
| ! | TTTGATGTGCTGTTGAAGAA+TGG | - | chr8_3:65021664-65021683 | Msa1302440:CDS | 35.0% |
| ! | TTGATGTGCTGTTGAAGAAT+GGG | - | chr8_3:65021665-65021684 | Msa1302440:CDS | 35.0% |
| ! | TGATGGTGATGTTGTGAATT+TGG | - | chr8_3:65021732-65021751 | Msa1302440:CDS | 35.0% |
| ! | GATGGTGATGTTGTGAATTT+GGG | - | chr8_3:65021733-65021752 | Msa1302440:CDS | 35.0% |
| AGAAGGATGCTGTTAATTCA+GGG | - | chr8_3:65021875-65021894 | Msa1302440:CDS | 35.0% | |
| AAATGCAAGAAGGAGAAGAA+AGG | - | chr8_3:65022009-65022028 | Msa1302440:intron | 35.0% | |
| AATGATGCCAATGAAAATGG+TGG | - | chr8_3:65022138-65022157 | Msa1302440:CDS | 35.0% | |
| TGGTGGAAATTCAATTGATG+AGG | - | chr8_3:65022155-65022174 | Msa1302440:CDS | 35.0% | |
| TGGAAATTCAATTGATGAGG+TGG | - | chr8_3:65022158-65022177 | Msa1302440:CDS | 35.0% | |
| ! | TTCTAAAGGAAAGACATCTC+AGG | - | chr8_3:65022326-65022345 | Msa1302440:CDS | 35.0% |
| !!! | CAGGATTTTGATTTGAATGG+TGG | - | chr8_3:65022345-65022364 | Msa1302440:CDS | 35.0% |
| !!! | CCATACCAGGTTATTTTTCA+TGG | + | chr8_3:65022433-65022452 | None:intergenic | 35.0% |
| CCATGAAAAATAACCTGGTA+TGG | - | chr8_3:65022430-65022449 | Msa1302440:CDS | 35.0% | |
| !! | TCAGTTTCGCCTTTTTGTTT+TGG | + | chr8_3:65022569-65022588 | None:intergenic | 35.0% |
| ACCAATTATTGTCCTTCTAC+CGG | + | chr8_3:65022598-65022617 | None:intergenic | 35.0% | |
| CGAGTTGTTTAATGAGTGAA+CGG | + | chr8_3:65021059-65021078 | None:intergenic | 35.0% | |
| ! | AAGGTCTTTTCTACTGTGTT+TGG | - | chr8_3:65021187-65021206 | Msa1302440:CDS | 35.0% |
| AAATACTGAACGGTGAATGA+AGG | + | chr8_3:65021282-65021301 | None:intergenic | 35.0% | |
| CGCTTATGAATAAGAATTCG+TGG | - | chr8_3:65021406-65021425 | Msa1302440:CDS | 35.0% | |
| GAATAAGAATTCGTGGGATT+TGG | - | chr8_3:65021413-65021432 | Msa1302440:CDS | 35.0% | |
| ! | AACACCTTTTCTTCCTGTTA+AGG | - | chr8_3:65021551-65021570 | Msa1302440:CDS | 35.0% |
| ! | TCTAAAACACTCACCTTAAC+AGG | + | chr8_3:65021567-65021586 | None:intergenic | 35.0% |
| !!! | AAGCCTTTTTTACTGTGATG+GGG | - | chr8_3:65021597-65021616 | Msa1302440:CDS | 35.0% |
| TTTCCCCATCACAGTAAAAA+AGG | + | chr8_3:65021603-65021622 | None:intergenic | 35.0% | |
| !!! | TTGCCTGATAAGGTTTTGTT+AGG | - | chr8_3:65021623-65021642 | Msa1302440:CDS | 35.0% |
| !!! | TGCCTGATAAGGTTTTGTTA+GGG | - | chr8_3:65021624-65021643 | Msa1302440:CDS | 35.0% |
| TTCCCTAACAAAACCTTATC+AGG | + | chr8_3:65021629-65021648 | None:intergenic | 35.0% | |
| ! | TTTGATGTGCTGTTGAAGAA+TGG | - | chr8_3:65021664-65021683 | Msa1302440:CDS | 35.0% |
| ! | TTGATGTGCTGTTGAAGAAT+GGG | - | chr8_3:65021665-65021684 | Msa1302440:CDS | 35.0% |
| ! | TGATGGTGATGTTGTGAATT+TGG | - | chr8_3:65021732-65021751 | Msa1302440:CDS | 35.0% |
| ! | GATGGTGATGTTGTGAATTT+GGG | - | chr8_3:65021733-65021752 | Msa1302440:CDS | 35.0% |
| AGAAGGATGCTGTTAATTCA+GGG | - | chr8_3:65021875-65021894 | Msa1302440:CDS | 35.0% | |
| AAATGCAAGAAGGAGAAGAA+AGG | - | chr8_3:65022009-65022028 | Msa1302440:intron | 35.0% | |
| AATGATGCCAATGAAAATGG+TGG | - | chr8_3:65022138-65022157 | Msa1302440:CDS | 35.0% | |
| TGGTGGAAATTCAATTGATG+AGG | - | chr8_3:65022155-65022174 | Msa1302440:CDS | 35.0% | |
| TGGAAATTCAATTGATGAGG+TGG | - | chr8_3:65022158-65022177 | Msa1302440:CDS | 35.0% | |
| ! | TTCTAAAGGAAAGACATCTC+AGG | - | chr8_3:65022326-65022345 | Msa1302440:CDS | 35.0% |
| !!! | CAGGATTTTGATTTGAATGG+TGG | - | chr8_3:65022345-65022364 | Msa1302440:CDS | 35.0% |
| !!! | CCATACCAGGTTATTTTTCA+TGG | + | chr8_3:65022433-65022452 | None:intergenic | 35.0% |
| CCATGAAAAATAACCTGGTA+TGG | - | chr8_3:65022430-65022449 | Msa1302440:CDS | 35.0% | |
| !! | TCAGTTTCGCCTTTTTGTTT+TGG | + | chr8_3:65022569-65022588 | None:intergenic | 35.0% |
| ACCAATTATTGTCCTTCTAC+CGG | + | chr8_3:65022598-65022617 | None:intergenic | 35.0% | |
| !! | AGCTTTTTGGCATCTTCTTC+AGG | + | chr8_3:65021162-65021181 | None:intergenic | 40.0% |
| AAGAAGATGCCAAAAAGCTC+TGG | - | chr8_3:65021163-65021182 | Msa1302440:CDS | 40.0% | |
| ! | AAGACCTTTCCAGAGCTTTT+TGG | + | chr8_3:65021175-65021194 | None:intergenic | 40.0% |
| !! | TAACCTCAAAGCATCGATAC+CGG | + | chr8_3:65021340-65021359 | None:intergenic | 40.0% |
| TTCGAGTGATAAGTTGTTGC+AGG | - | chr8_3:65021482-65021501 | Msa1302440:CDS | 40.0% | |
| TCGAGTGATAAGTTGTTGCA+GGG | - | chr8_3:65021483-65021502 | Msa1302440:CDS | 40.0% | |
| GATAAGTTGTTGCAGGGAAA+AGG | - | chr8_3:65021489-65021508 | Msa1302440:CDS | 40.0% | |
| CTCACCTTAACAGGAAGAAA+AGG | + | chr8_3:65021558-65021577 | None:intergenic | 40.0% | |
| GAAGAATGGGAAGAAGTTGT+TGG | - | chr8_3:65021678-65021697 | Msa1302440:CDS | 40.0% | |
| TTGTTGGAGATGAAGAAGAG+TGG | - | chr8_3:65021694-65021713 | Msa1302440:CDS | 40.0% | |
| AATTTGGGAACGATTGCGTT+GGG | - | chr8_3:65021748-65021767 | Msa1302440:CDS | 40.0% | |
| TGCTTCCAAGTTGTTTGAGT+TGG | - | chr8_3:65021780-65021799 | Msa1302440:CDS | 40.0% | |
| ! | GCTTCCAAGTTGTTTGAGTT+GGG | - | chr8_3:65021781-65021800 | Msa1302440:CDS | 40.0% |
| AGAACCCAACTCAAACAACT+TGG | + | chr8_3:65021788-65021807 | None:intergenic | 40.0% | |
| ! | TGAGTTTTTGCAGCTAGAGA+AGG | - | chr8_3:65021858-65021877 | Msa1302440:CDS | 40.0% |
| GAGAAGGATGCTGTTAATTC+AGG | - | chr8_3:65021874-65021893 | Msa1302440:CDS | 40.0% | |
| CGATTCCTGATTCTGTTGAT+CGG | - | chr8_3:65021908-65021927 | Msa1302440:CDS | 40.0% | |
| GATTCCTGATTCTGTTGATC+GGG | - | chr8_3:65021909-65021928 | Msa1302440:CDS | 40.0% | |
| TCAACAATGGGAACCAAATC+TGG | + | chr8_3:65021949-65021968 | None:intergenic | 40.0% | |
| ! | AGATTTGGTTCCCATTGTTG+AGG | - | chr8_3:65021948-65021967 | Msa1302440:CDS | 40.0% |
| TCAGCATCAACCTCAACAAT+GGG | + | chr8_3:65021961-65021980 | None:intergenic | 40.0% | |
| ATCAGCATCAACCTCAACAA+TGG | + | chr8_3:65021962-65021981 | None:intergenic | 40.0% | |
| GATGCTGATGTTGTTCAGAA+TGG | - | chr8_3:65021973-65021992 | Msa1302440:CDS | 40.0% | |
| GTTGCTGAAGAAATGCAAGA+AGG | - | chr8_3:65021999-65022018 | Msa1302440:intron | 40.0% | |
| GTTCTCAGCAGAATTCATCT+CGG | + | chr8_3:65022109-65022128 | None:intergenic | 40.0% | |
| GAGATGAATTCTGCTGAGAA+CGG | - | chr8_3:65022108-65022127 | Msa1302440:intron | 40.0% | |
| AGATGAATTCTGCTGAGAAC+GGG | - | chr8_3:65022109-65022128 | Msa1302440:intron | 40.0% | |
| ! | CAACCTTCTCAAACTGCTTT+TGG | + | chr8_3:65022212-65022231 | None:intergenic | 40.0% |
| TCTCTTCTTAGAAACATCCC+CGG | + | chr8_3:65022292-65022311 | None:intergenic | 40.0% | |
| AATCTGCAGTAGCAAAGAGT+GGG | - | chr8_3:65022379-65022398 | Msa1302440:CDS | 40.0% | |
| TGGGGATAAAAGCTCAAAGA+AGG | - | chr8_3:65022398-65022417 | Msa1302440:CDS | 40.0% | |
| GATGCCTCTCCAAAACAAAA+AGG | - | chr8_3:65022557-65022576 | Msa1302440:CDS | 40.0% | |
| !!! | TTCGCCTTTTTGTTTTGGAG+AGG | + | chr8_3:65022564-65022583 | None:intergenic | 40.0% |
| !! | AGCTTTTTGGCATCTTCTTC+AGG | + | chr8_3:65021162-65021181 | None:intergenic | 40.0% |
| AAGAAGATGCCAAAAAGCTC+TGG | - | chr8_3:65021163-65021182 | Msa1302440:CDS | 40.0% | |
| ! | AAGACCTTTCCAGAGCTTTT+TGG | + | chr8_3:65021175-65021194 | None:intergenic | 40.0% |
| !! | TAACCTCAAAGCATCGATAC+CGG | + | chr8_3:65021340-65021359 | None:intergenic | 40.0% |
| TTCGAGTGATAAGTTGTTGC+AGG | - | chr8_3:65021482-65021501 | Msa1302440:CDS | 40.0% | |
| TCGAGTGATAAGTTGTTGCA+GGG | - | chr8_3:65021483-65021502 | Msa1302440:CDS | 40.0% | |
| GATAAGTTGTTGCAGGGAAA+AGG | - | chr8_3:65021489-65021508 | Msa1302440:CDS | 40.0% | |
| CTCACCTTAACAGGAAGAAA+AGG | + | chr8_3:65021558-65021577 | None:intergenic | 40.0% | |
| GAAGAATGGGAAGAAGTTGT+TGG | - | chr8_3:65021678-65021697 | Msa1302440:CDS | 40.0% | |
| TTGTTGGAGATGAAGAAGAG+TGG | - | chr8_3:65021694-65021713 | Msa1302440:CDS | 40.0% | |
| AATTTGGGAACGATTGCGTT+GGG | - | chr8_3:65021748-65021767 | Msa1302440:CDS | 40.0% | |
| TGCTTCCAAGTTGTTTGAGT+TGG | - | chr8_3:65021780-65021799 | Msa1302440:CDS | 40.0% | |
| ! | GCTTCCAAGTTGTTTGAGTT+GGG | - | chr8_3:65021781-65021800 | Msa1302440:CDS | 40.0% |
| AGAACCCAACTCAAACAACT+TGG | + | chr8_3:65021788-65021807 | None:intergenic | 40.0% | |
| ! | TGAGTTTTTGCAGCTAGAGA+AGG | - | chr8_3:65021858-65021877 | Msa1302440:CDS | 40.0% |
| GAGAAGGATGCTGTTAATTC+AGG | - | chr8_3:65021874-65021893 | Msa1302440:CDS | 40.0% | |
| CGATTCCTGATTCTGTTGAT+CGG | - | chr8_3:65021908-65021927 | Msa1302440:CDS | 40.0% | |
| GATTCCTGATTCTGTTGATC+GGG | - | chr8_3:65021909-65021928 | Msa1302440:CDS | 40.0% | |
| TCAACAATGGGAACCAAATC+TGG | + | chr8_3:65021949-65021968 | None:intergenic | 40.0% | |
| ! | AGATTTGGTTCCCATTGTTG+AGG | - | chr8_3:65021948-65021967 | Msa1302440:CDS | 40.0% |
| TCAGCATCAACCTCAACAAT+GGG | + | chr8_3:65021961-65021980 | None:intergenic | 40.0% | |
| ATCAGCATCAACCTCAACAA+TGG | + | chr8_3:65021962-65021981 | None:intergenic | 40.0% | |
| GATGCTGATGTTGTTCAGAA+TGG | - | chr8_3:65021973-65021992 | Msa1302440:CDS | 40.0% | |
| GTTGCTGAAGAAATGCAAGA+AGG | - | chr8_3:65021999-65022018 | Msa1302440:intron | 40.0% | |
| GTTCTCAGCAGAATTCATCT+CGG | + | chr8_3:65022109-65022128 | None:intergenic | 40.0% | |
| GAGATGAATTCTGCTGAGAA+CGG | - | chr8_3:65022108-65022127 | Msa1302440:intron | 40.0% | |
| AGATGAATTCTGCTGAGAAC+GGG | - | chr8_3:65022109-65022128 | Msa1302440:intron | 40.0% | |
| ! | CAACCTTCTCAAACTGCTTT+TGG | + | chr8_3:65022212-65022231 | None:intergenic | 40.0% |
| TCTCTTCTTAGAAACATCCC+CGG | + | chr8_3:65022292-65022311 | None:intergenic | 40.0% | |
| AATCTGCAGTAGCAAAGAGT+GGG | - | chr8_3:65022379-65022398 | Msa1302440:CDS | 40.0% | |
| TGGGGATAAAAGCTCAAAGA+AGG | - | chr8_3:65022398-65022417 | Msa1302440:CDS | 40.0% | |
| GATGCCTCTCCAAAACAAAA+AGG | - | chr8_3:65022557-65022576 | Msa1302440:CDS | 40.0% | |
| !!! | TTCGCCTTTTTGTTTTGGAG+AGG | + | chr8_3:65022564-65022583 | None:intergenic | 40.0% |
| TTGGCATCTTCTTCAGGAAG+TGG | + | chr8_3:65021156-65021175 | None:intergenic | 45.0% | |
| !! | GATGCCAAAAAGCTCTGGAA+AGG | - | chr8_3:65021168-65021187 | Msa1302440:CDS | 45.0% |
| GATGGGGAAATTGCCTGATA+AGG | - | chr8_3:65021613-65021632 | Msa1302440:CDS | 45.0% | |
| TTGGAGATGAAGAAGAGTGG+TGG | - | chr8_3:65021697-65021716 | Msa1302440:CDS | 45.0% | |
| TGGAGATGAAGAAGAGTGGT+GGG | - | chr8_3:65021698-65021717 | Msa1302440:CDS | 45.0% | |
| GAATTTGGGAACGATTGCGT+TGG | - | chr8_3:65021747-65021766 | Msa1302440:CDS | 45.0% | |
| ATTTGGGAACGATTGCGTTG+GGG | - | chr8_3:65021749-65021768 | Msa1302440:CDS | 45.0% | |
| TTCTGCTCCTGATTGTGTTC+AGG | - | chr8_3:65021804-65021823 | Msa1302440:CDS | 45.0% | |
| TCTGCTCCTGATTGTGTTCA+GGG | - | chr8_3:65021805-65021824 | Msa1302440:CDS | 45.0% | |
| CTATTCCCCTGAACACAATC+AGG | + | chr8_3:65021814-65021833 | None:intergenic | 45.0% | |
| TCAACCCGATCAACAGAATC+AGG | + | chr8_3:65021916-65021935 | None:intergenic | 45.0% | |
| !! | TTCTGTTGATCGGGTTGATG+AGG | - | chr8_3:65021918-65021937 | Msa1302440:CDS | 45.0% |
| !! | TGATGAGGAAGTGCCAGATT+TGG | - | chr8_3:65021933-65021952 | Msa1302440:CDS | 45.0% |
| GATGAATTCTGCTGAGAACG+GGG | - | chr8_3:65022110-65022129 | Msa1302440:intron | 45.0% | |
| GAGGTTCGAAATCACACTCT+CGG | + | chr8_3:65022190-65022209 | None:intergenic | 45.0% | |
| !! | CCTTCTCAAACTGCTTTTGG+AGG | + | chr8_3:65022209-65022228 | None:intergenic | 45.0% |
| CCTCCAAAAGCAGTTTGAGA+AGG | - | chr8_3:65022206-65022225 | Msa1302440:CDS | 45.0% | |
| GAATCTGCAGTAGCAAAGAG+TGG | - | chr8_3:65022378-65022397 | Msa1302440:CDS | 45.0% | |
| ATCTGCAGTAGCAAAGAGTG+GGG | - | chr8_3:65022380-65022399 | Msa1302440:CDS | 45.0% | |
| TGTTTGAGTGCACTTCCTCT+GGG | + | chr8_3:65022510-65022529 | None:intergenic | 45.0% | |
| ! | AGAGGAAGTGCACTCAAACA+GGG | - | chr8_3:65022510-65022529 | Msa1302440:CDS | 45.0% |
| AAGGCGAAACTGAAGAAAGC+CGG | - | chr8_3:65022576-65022595 | Msa1302440:CDS | 45.0% | |
| AACTGAAGAAAGCCGGTAGA+AGG | - | chr8_3:65022583-65022602 | Msa1302440:CDS | 45.0% | |
| GCCGGTAGAAGGACAATAAT+TGG | - | chr8_3:65022594-65022613 | Msa1302440:CDS | 45.0% | |
| TTCTTCATGCGCTTGACAGA+TGG | + | chr8_3:65022627-65022646 | None:intergenic | 45.0% | |
| TTGGCATCTTCTTCAGGAAG+TGG | + | chr8_3:65021156-65021175 | None:intergenic | 45.0% | |
| !! | GATGCCAAAAAGCTCTGGAA+AGG | - | chr8_3:65021168-65021187 | Msa1302440:CDS | 45.0% |
| GATGGGGAAATTGCCTGATA+AGG | - | chr8_3:65021613-65021632 | Msa1302440:CDS | 45.0% | |
| TTGGAGATGAAGAAGAGTGG+TGG | - | chr8_3:65021697-65021716 | Msa1302440:CDS | 45.0% | |
| TGGAGATGAAGAAGAGTGGT+GGG | - | chr8_3:65021698-65021717 | Msa1302440:CDS | 45.0% | |
| GAATTTGGGAACGATTGCGT+TGG | - | chr8_3:65021747-65021766 | Msa1302440:CDS | 45.0% | |
| ATTTGGGAACGATTGCGTTG+GGG | - | chr8_3:65021749-65021768 | Msa1302440:CDS | 45.0% | |
| TTCTGCTCCTGATTGTGTTC+AGG | - | chr8_3:65021804-65021823 | Msa1302440:CDS | 45.0% | |
| TCTGCTCCTGATTGTGTTCA+GGG | - | chr8_3:65021805-65021824 | Msa1302440:CDS | 45.0% | |
| CTATTCCCCTGAACACAATC+AGG | + | chr8_3:65021814-65021833 | None:intergenic | 45.0% | |
| TCAACCCGATCAACAGAATC+AGG | + | chr8_3:65021916-65021935 | None:intergenic | 45.0% | |
| !! | TTCTGTTGATCGGGTTGATG+AGG | - | chr8_3:65021918-65021937 | Msa1302440:CDS | 45.0% |
| !! | TGATGAGGAAGTGCCAGATT+TGG | - | chr8_3:65021933-65021952 | Msa1302440:CDS | 45.0% |
| GATGAATTCTGCTGAGAACG+GGG | - | chr8_3:65022110-65022129 | Msa1302440:intron | 45.0% | |
| GAGGTTCGAAATCACACTCT+CGG | + | chr8_3:65022190-65022209 | None:intergenic | 45.0% | |
| !! | CCTTCTCAAACTGCTTTTGG+AGG | + | chr8_3:65022209-65022228 | None:intergenic | 45.0% |
| CCTCCAAAAGCAGTTTGAGA+AGG | - | chr8_3:65022206-65022225 | Msa1302440:CDS | 45.0% | |
| GAATCTGCAGTAGCAAAGAG+TGG | - | chr8_3:65022378-65022397 | Msa1302440:CDS | 45.0% | |
| ATCTGCAGTAGCAAAGAGTG+GGG | - | chr8_3:65022380-65022399 | Msa1302440:CDS | 45.0% | |
| TGTTTGAGTGCACTTCCTCT+GGG | + | chr8_3:65022510-65022529 | None:intergenic | 45.0% | |
| ! | AGAGGAAGTGCACTCAAACA+GGG | - | chr8_3:65022510-65022529 | Msa1302440:CDS | 45.0% |
| AAGGCGAAACTGAAGAAAGC+CGG | - | chr8_3:65022576-65022595 | Msa1302440:CDS | 45.0% | |
| AACTGAAGAAAGCCGGTAGA+AGG | - | chr8_3:65022583-65022602 | Msa1302440:CDS | 45.0% | |
| GCCGGTAGAAGGACAATAAT+TGG | - | chr8_3:65022594-65022613 | Msa1302440:CDS | 45.0% | |
| TTCTTCATGCGCTTGACAGA+TGG | + | chr8_3:65022627-65022646 | None:intergenic | 45.0% | |
| AATGAGTGAACGGCCAGCTT+CGG | + | chr8_3:65021049-65021068 | None:intergenic | 50.0% | |
| GGAAGTGGTTGAGATCGAGA+AGG | + | chr8_3:65021141-65021160 | None:intergenic | 50.0% | |
| ATGAGGTCAGCTTGAACGAG+AGG | + | chr8_3:65021225-65021244 | None:intergenic | 50.0% | |
| GGAGATGAAGAAGAGTGGTG+GGG | - | chr8_3:65021699-65021718 | Msa1302440:CDS | 50.0% | |
| ! | AAGAAGAGTGGTGGGGATGA+AGG | - | chr8_3:65021706-65021725 | Msa1302440:CDS | 50.0% |
| CTGCTCCTGATTGTGTTCAG+GGG | - | chr8_3:65021806-65021825 | Msa1302440:CDS | 50.0% | |
| GCAGTTTGAGAAGGTTGCTG+CGG | - | chr8_3:65022215-65022234 | Msa1302440:CDS | 50.0% | |
| TGAGGAGGTAAAGGACTGTG+TGG | + | chr8_3:65022459-65022478 | None:intergenic | 50.0% | |
| !! | CTCAAGCTCTGAGGAGGTAA+AGG | + | chr8_3:65022468-65022487 | None:intergenic | 50.0% |
| !! | GGAATTCTCAAGCTCTGAGG+AGG | + | chr8_3:65022474-65022493 | None:intergenic | 50.0% |
| GGAGGAATTCTCAAGCTCTG+AGG | + | chr8_3:65022477-65022496 | None:intergenic | 50.0% | |
| CTTCCTCTGGGTGTAACAGA+GGG | + | chr8_3:65022498-65022517 | None:intergenic | 50.0% | |
| ACTTCCTCTGGGTGTAACAG+AGG | + | chr8_3:65022499-65022518 | None:intergenic | 50.0% | |
| CTGTTTGAGTGCACTTCCTC+TGG | + | chr8_3:65022511-65022530 | None:intergenic | 50.0% | |
| ! | CAGAGGAAGTGCACTCAAAC+AGG | - | chr8_3:65022509-65022528 | Msa1302440:CDS | 50.0% |
| ATCTCTCTGATTGGACCTGG+AGG | + | chr8_3:65022540-65022559 | None:intergenic | 50.0% | |
| !! | TGGAGAGGCATCTCTCTGAT+TGG | + | chr8_3:65022549-65022568 | None:intergenic | 50.0% |
| AATGAGTGAACGGCCAGCTT+CGG | + | chr8_3:65021049-65021068 | None:intergenic | 50.0% | |
| GGAAGTGGTTGAGATCGAGA+AGG | + | chr8_3:65021141-65021160 | None:intergenic | 50.0% | |
| ATGAGGTCAGCTTGAACGAG+AGG | + | chr8_3:65021225-65021244 | None:intergenic | 50.0% | |
| GGAGATGAAGAAGAGTGGTG+GGG | - | chr8_3:65021699-65021718 | Msa1302440:CDS | 50.0% | |
| ! | AAGAAGAGTGGTGGGGATGA+AGG | - | chr8_3:65021706-65021725 | Msa1302440:CDS | 50.0% |
| CTGCTCCTGATTGTGTTCAG+GGG | - | chr8_3:65021806-65021825 | Msa1302440:CDS | 50.0% | |
| GCAGTTTGAGAAGGTTGCTG+CGG | - | chr8_3:65022215-65022234 | Msa1302440:CDS | 50.0% | |
| TGAGGAGGTAAAGGACTGTG+TGG | + | chr8_3:65022459-65022478 | None:intergenic | 50.0% | |
| !! | CTCAAGCTCTGAGGAGGTAA+AGG | + | chr8_3:65022468-65022487 | None:intergenic | 50.0% |
| !! | GGAATTCTCAAGCTCTGAGG+AGG | + | chr8_3:65022474-65022493 | None:intergenic | 50.0% |
| GGAGGAATTCTCAAGCTCTG+AGG | + | chr8_3:65022477-65022496 | None:intergenic | 50.0% | |
| CTTCCTCTGGGTGTAACAGA+GGG | + | chr8_3:65022498-65022517 | None:intergenic | 50.0% | |
| ACTTCCTCTGGGTGTAACAG+AGG | + | chr8_3:65022499-65022518 | None:intergenic | 50.0% | |
| CTGTTTGAGTGCACTTCCTC+TGG | + | chr8_3:65022511-65022530 | None:intergenic | 50.0% | |
| ! | CAGAGGAAGTGCACTCAAAC+AGG | - | chr8_3:65022509-65022528 | Msa1302440:CDS | 50.0% |
| ATCTCTCTGATTGGACCTGG+AGG | + | chr8_3:65022540-65022559 | None:intergenic | 50.0% | |
| !! | TGGAGAGGCATCTCTCTGAT+TGG | + | chr8_3:65022549-65022568 | None:intergenic | 50.0% |
| TCCTCACTATGCGTCGCGAA+TGG | - | chr8_3:65021313-65021332 | Msa1302440:CDS | 55.0% | |
| ACCATTCGCGACGCATAGTG+AGG | + | chr8_3:65021317-65021336 | None:intergenic | 55.0% | |
| ACTATGCGTCGCGAATGGTC+CGG | - | chr8_3:65021318-65021337 | Msa1302440:CDS | 55.0% | |
| !! | GGTCCGGTATCGATGCTTTG+AGG | - | chr8_3:65021334-65021353 | Msa1302440:CDS | 55.0% |
| ! | AAGAGTGGTGGGGATGAAGG+TGG | - | chr8_3:65021709-65021728 | Msa1302440:CDS | 55.0% |
| GGAACGATTGCGTTGGGGAT+GGG | - | chr8_3:65021754-65021773 | Msa1302440:CDS | 55.0% | |
| GCGGAAGCAGGTTTGGAAGA+CGG | - | chr8_3:65022234-65022253 | Msa1302440:CDS | 55.0% | |
| TGTGCTACACCCAAAGCTGC+CGG | - | chr8_3:65022270-65022289 | Msa1302440:CDS | 55.0% | |
| GAAACATCCCCGGCAGCTTT+GGG | + | chr8_3:65022282-65022301 | None:intergenic | 55.0% | |
| AGAAACATCCCCGGCAGCTT+TGG | + | chr8_3:65022283-65022302 | None:intergenic | 55.0% | |
| GACTGTGTGGCTTCCATACC+AGG | + | chr8_3:65022446-65022465 | None:intergenic | 55.0% | |
| CTCAAACAGGGTGTACCTCC+AGG | - | chr8_3:65022522-65022541 | Msa1302440:CDS | 55.0% | |
| GGCATCTCTCTGATTGGACC+TGG | + | chr8_3:65022543-65022562 | None:intergenic | 55.0% | |
| TCCTCACTATGCGTCGCGAA+TGG | - | chr8_3:65021313-65021332 | Msa1302440:CDS | 55.0% | |
| ACCATTCGCGACGCATAGTG+AGG | + | chr8_3:65021317-65021336 | None:intergenic | 55.0% | |
| ACTATGCGTCGCGAATGGTC+CGG | - | chr8_3:65021318-65021337 | Msa1302440:CDS | 55.0% | |
| !! | GGTCCGGTATCGATGCTTTG+AGG | - | chr8_3:65021334-65021353 | Msa1302440:CDS | 55.0% |
| ! | AAGAGTGGTGGGGATGAAGG+TGG | - | chr8_3:65021709-65021728 | Msa1302440:CDS | 55.0% |
| GGAACGATTGCGTTGGGGAT+GGG | - | chr8_3:65021754-65021773 | Msa1302440:CDS | 55.0% | |
| GCGGAAGCAGGTTTGGAAGA+CGG | - | chr8_3:65022234-65022253 | Msa1302440:CDS | 55.0% | |
| TGTGCTACACCCAAAGCTGC+CGG | - | chr8_3:65022270-65022289 | Msa1302440:CDS | 55.0% | |
| GAAACATCCCCGGCAGCTTT+GGG | + | chr8_3:65022282-65022301 | None:intergenic | 55.0% | |
| AGAAACATCCCCGGCAGCTT+TGG | + | chr8_3:65022283-65022302 | None:intergenic | 55.0% | |
| GACTGTGTGGCTTCCATACC+AGG | + | chr8_3:65022446-65022465 | None:intergenic | 55.0% | |
| CTCAAACAGGGTGTACCTCC+AGG | - | chr8_3:65022522-65022541 | Msa1302440:CDS | 55.0% | |
| GGCATCTCTCTGATTGGACC+TGG | + | chr8_3:65022543-65022562 | None:intergenic | 55.0% | |
| GCGACAAACGCATCCGAAGC+TGG | - | chr8_3:65021033-65021052 | Msa1302440:CDS | 60.0% | |
| GCGAAGCGAGACGATCGATG+AGG | + | chr8_3:65021242-65021261 | None:intergenic | 60.0% | |
| GGTGGGGATGAAGGTGGTGA+TGG | - | chr8_3:65021715-65021734 | Msa1302440:CDS | 60.0% | |
| GGGAACGATTGCGTTGGGGA+TGG | - | chr8_3:65021753-65021772 | Msa1302440:CDS | 60.0% | |
| GAGAAGGTTGCTGCGGAAGC+AGG | - | chr8_3:65022222-65022241 | Msa1302440:CDS | 60.0% | |
| GGTTGCTGCGGAAGCAGGTT+TGG | - | chr8_3:65022227-65022246 | Msa1302440:CDS | 60.0% | |
| GTGCTACACCCAAAGCTGCC+GGG | - | chr8_3:65022271-65022290 | Msa1302440:CDS | 60.0% | |
| TGCTACACCCAAAGCTGCCG+GGG | - | chr8_3:65022272-65022291 | Msa1302440:CDS | 60.0% | |
| CCTCTGGGTGTAACAGAGGG+AGG | + | chr8_3:65022495-65022514 | None:intergenic | 60.0% | |
| CCTCCCTCTGTTACACCCAG+AGG | - | chr8_3:65022492-65022511 | Msa1302440:CDS | 60.0% | |
| GCGACAAACGCATCCGAAGC+TGG | - | chr8_3:65021033-65021052 | Msa1302440:CDS | 60.0% | |
| GCGAAGCGAGACGATCGATG+AGG | + | chr8_3:65021242-65021261 | None:intergenic | 60.0% | |
| GGTGGGGATGAAGGTGGTGA+TGG | - | chr8_3:65021715-65021734 | Msa1302440:CDS | 60.0% | |
| GGGAACGATTGCGTTGGGGA+TGG | - | chr8_3:65021753-65021772 | Msa1302440:CDS | 60.0% | |
| GAGAAGGTTGCTGCGGAAGC+AGG | - | chr8_3:65022222-65022241 | Msa1302440:CDS | 60.0% | |
| GGTTGCTGCGGAAGCAGGTT+TGG | - | chr8_3:65022227-65022246 | Msa1302440:CDS | 60.0% | |
| GTGCTACACCCAAAGCTGCC+GGG | - | chr8_3:65022271-65022290 | Msa1302440:CDS | 60.0% | |
| TGCTACACCCAAAGCTGCCG+GGG | - | chr8_3:65022272-65022291 | Msa1302440:CDS | 60.0% | |
| CCTCTGGGTGTAACAGAGGG+AGG | + | chr8_3:65022495-65022514 | None:intergenic | 60.0% | |
| CCTCCCTCTGTTACACCCAG+AGG | - | chr8_3:65022492-65022511 | Msa1302440:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 65021030 | 65022668 | 65021030 | ID=Msa1302440;Name=Msa1302440 |
| chr8_3 | mRNA | 65021030 | 65022668 | 65021030 | ID=Msa1302440-mRNA-1;Parent=Msa1302440;Name=Msa1302440-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|2|0|509 |
| chr8_3 | exon | 65022126 | 65022668 | 65022126 | ID=Msa1302440-mRNA-1:exon:19704;Parent=Msa1302440-mRNA-1 |
| chr8_3 | exon | 65021030 | 65022016 | 65021030 | ID=Msa1302440-mRNA-1:exon:19703;Parent=Msa1302440-mRNA-1 |
| chr8_3 | CDS | 65022126 | 65022668 | 65022126 | ID=Msa1302440-mRNA-1:cds;Parent=Msa1302440-mRNA-1 |
| chr8_3 | CDS | 65021030 | 65022016 | 65021030 | ID=Msa1302440-mRNA-1:cds;Parent=Msa1302440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
