Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437860 | XP_003625506.1 | 96.162 | 495 | 19 | 0 | 1 | 495 | 465 | 959 | 0.0 | 946 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437860 | sp|Q9LD55|EIF3A_ARATH | 56.731 | 520 | 196 | 5 | 1 | 492 | 465 | 983 | 8.24e-147 | 448 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437860 | G7L0K9 | 96.162 | 495 | 19 | 0 | 1 | 495 | 465 | 959 | 0.0 | 946 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003780 | Msa1437860 | 0.818531 | 1.867124e-52 | -8.615850e-47 |
| Msa0010490 | Msa1437860 | 0.808502 | 3.001610e-50 | -8.615850e-47 |
| Msa0010500 | Msa1437860 | 0.815313 | 9.856361e-52 | -8.615850e-47 |
| Msa0024110 | Msa1437860 | 0.815653 | 8.278177e-52 | -8.615850e-47 |
| Msa0033110 | Msa1437860 | 0.812885 | 3.384691e-51 | -8.615850e-47 |
| Msa0033260 | Msa1437860 | 0.810949 | 8.936328e-51 | -8.615850e-47 |
| Msa0037250 | Msa1437860 | 0.804637 | 1.963457e-49 | -8.615850e-47 |
| Msa0042280 | Msa1437860 | 0.810287 | 1.242626e-50 | -8.615850e-47 |
| Msa0045730 | Msa1437860 | 0.848002 | 8.085961e-60 | -8.615850e-47 |
| Msa0048180 | Msa1437860 | 0.802899 | 4.507154e-49 | -8.615850e-47 |
| Msa0059950 | Msa1437860 | 0.826584 | 2.503988e-54 | -8.615850e-47 |
| Msa0072420 | Msa1437860 | 0.840793 | 7.018521e-58 | -8.615850e-47 |
| Msa0091410 | Msa1437860 | 0.817282 | 3.575741e-52 | -8.615850e-47 |
| Msa0118710 | Msa1437860 | 0.810545 | 1.092962e-50 | -8.615850e-47 |
| Msa0119900 | Msa1437860 | 0.818384 | 2.016364e-52 | -8.615850e-47 |
| Msa1360980 | Msa1437860 | 0.803484 | 3.409612e-49 | -8.615850e-47 |
| Msa1369190 | Msa1437860 | 0.806160 | 9.415879e-50 | -8.615850e-47 |
| Msa1399530 | Msa1437860 | 0.817949 | 2.528526e-52 | -8.615850e-47 |
| Msa1410130 | Msa1437860 | -0.813370 | 2.649324e-51 | -8.615850e-47 |
| Msa1413260 | Msa1437860 | 0.805219 | 1.483858e-49 | -8.615850e-47 |
| Msa1425670 | Msa1437860 | 0.805743 | 1.152183e-49 | -8.615850e-47 |
| Msa1428880 | Msa1437860 | 0.826719 | 2.324899e-54 | -8.615850e-47 |
| Msa1435170 | Msa1437860 | -0.807593 | 4.686462e-50 | -8.615850e-47 |
| Msa1437860 | Msa1456050 | 0.840816 | 6.923119e-58 | -8.615850e-47 |
| Msa0607690 | Msa1437860 | 0.822045 | 2.922194e-53 | -8.615850e-47 |
| Msa0618930 | Msa1437860 | 0.802009 | 6.874071e-49 | -8.615850e-47 |
| Msa0622750 | Msa1437860 | 0.812068 | 5.106845e-51 | -8.615850e-47 |
| Msa0623200 | Msa1437860 | 0.844262 | 8.430661e-59 | -8.615850e-47 |
| Msa0634890 | Msa1437860 | 0.875668 | 2.570690e-68 | -8.615850e-47 |
| Msa0666230 | Msa1437860 | 0.810337 | 1.211914e-50 | -8.615850e-47 |
| Msa0672100 | Msa1437860 | 0.813268 | 2.789606e-51 | -8.615850e-47 |
| Msa0673160 | Msa1437860 | 0.822993 | 1.759035e-53 | -8.615850e-47 |
| Msa0695950 | Msa1437860 | 0.800465 | 1.422736e-48 | -8.615850e-47 |
| Msa0698780 | Msa1437860 | 0.827152 | 1.831705e-54 | -8.615850e-47 |
| Msa0698800 | Msa1437860 | 0.806784 | 6.953947e-50 | -8.615850e-47 |
| Msa0702700 | Msa1437860 | 0.850903 | 1.256563e-60 | -8.615850e-47 |
| Msa0704660 | Msa1437860 | 0.815065 | 1.118797e-51 | -8.615850e-47 |
| Msa0719180 | Msa1437860 | 0.826509 | 2.608478e-54 | -8.615850e-47 |
| Msa0741440 | Msa1437860 | 0.826384 | 2.794551e-54 | -8.615850e-47 |
| Msa0808800 | Msa1437860 | 0.817524 | 3.154401e-52 | -8.615850e-47 |
| Msa0819060 | Msa1437860 | 0.823578 | 1.284472e-53 | -8.615850e-47 |
| Msa0123510 | Msa1437860 | 0.800062 | 1.718481e-48 | -8.615850e-47 |
| Msa0131590 | Msa1437860 | 0.801290 | 9.652770e-49 | -8.615850e-47 |
| Msa0146340 | Msa1437860 | 0.822720 | 2.036734e-53 | -8.615850e-47 |
| Msa0150300 | Msa1437860 | 0.827509 | 1.504651e-54 | -8.615850e-47 |
| Msa0202490 | Msa1437860 | 0.839041 | 2.008029e-57 | -8.615850e-47 |
| Msa0207670 | Msa1437860 | 0.801729 | 7.849098e-49 | -8.615850e-47 |
| Msa0229170 | Msa1437860 | 0.807390 | 5.174391e-50 | -8.615850e-47 |
| Msa1235460 | Msa1437860 | 0.880396 | 5.683789e-70 | -8.615850e-47 |
| Msa1262890 | Msa1437860 | 0.825287 | 5.089845e-54 | -8.615850e-47 |
| Msa1265630 | Msa1437860 | 0.800938 | 1.139762e-48 | -8.615850e-47 |
| Msa1302440 | Msa1437860 | 0.815346 | 9.691807e-52 | -8.615850e-47 |
| Msa1315750 | Msa1437860 | 0.800141 | 1.656792e-48 | -8.615850e-47 |
| Msa1315890 | Msa1437860 | 0.819027 | 1.440419e-52 | -8.615850e-47 |
| Msa1329540 | Msa1437860 | 0.802340 | 5.878228e-49 | -8.615850e-47 |
| Msa1331250 | Msa1437860 | 0.829790 | 4.225999e-55 | -8.615850e-47 |
| Msa1341060 | Msa1437860 | 0.856213 | 3.745560e-62 | -8.615850e-47 |
| Msa0423750 | Msa1437860 | 0.833021 | 6.773067e-56 | -8.615850e-47 |
| Msa0443390 | Msa1437860 | 0.815614 | 8.446047e-52 | -8.615850e-47 |
| Msa0458370 | Msa1437860 | -0.818599 | 1.801978e-52 | -8.615850e-47 |
| Msa0460740 | Msa1437860 | 0.812147 | 4.907390e-51 | -8.615850e-47 |
| Msa0471960 | Msa1437860 | 0.814236 | 1.707065e-51 | -8.615850e-47 |
| Msa0980270 | Msa1437860 | 0.856704 | 2.687157e-62 | -8.615850e-47 |
| Msa1006840 | Msa1437860 | 0.804094 | 2.547535e-49 | -8.615850e-47 |
| Msa1039900 | Msa1437860 | 0.813615 | 2.339558e-51 | -8.615850e-47 |
| Msa1042780 | Msa1437860 | 0.859006 | 5.573854e-63 | -8.615850e-47 |
| Msa1059470 | Msa1437860 | 0.808355 | 3.226358e-50 | -8.615850e-47 |
| Msa1104140 | Msa1437860 | 0.807063 | 6.070732e-50 | -8.615850e-47 |
| Msa0245580 | Msa1437860 | 0.800784 | 1.225023e-48 | -8.615850e-47 |
| Msa0257520 | Msa1437860 | 0.808493 | 3.013949e-50 | -8.615850e-47 |
| Msa0284180 | Msa1437860 | 0.835643 | 1.488809e-56 | -8.615850e-47 |
| Msa0289280 | Msa1437860 | -0.811280 | 7.574545e-51 | -8.615850e-47 |
| Msa0317910 | Msa1437860 | 0.808841 | 2.540773e-50 | -8.615850e-47 |
| Msa0319640 | Msa1437860 | 0.812836 | 3.469591e-51 | -8.615850e-47 |
| Msa0327330 | Msa1437860 | 0.836858 | 7.315760e-57 | -8.615850e-47 |
| Msa0348830 | Msa1437860 | 0.827117 | 1.867654e-54 | -8.615850e-47 |
| Msa0357900 | Msa1437860 | 0.827158 | 1.825358e-54 | -8.615850e-47 |
| Msa1122310 | Msa1437860 | -0.812579 | 3.949171e-51 | -8.615850e-47 |
| Msa1123830 | Msa1437860 | 0.930157 | 2.464250e-93 | -8.615850e-47 |
| Msa1124070 | Msa1437860 | 0.806645 | 7.437460e-50 | -8.615850e-47 |
| Msa1126830 | Msa1437860 | 0.813808 | 2.121815e-51 | -8.615850e-47 |
| Msa1165780 | Msa1437860 | 0.831039 | 2.092435e-55 | -8.615850e-47 |
| Msa1175350 | Msa1437860 | 0.819755 | 9.829996e-53 | -8.615850e-47 |
| Msa1208020 | Msa1437860 | 0.859138 | 5.090160e-63 | -8.615850e-47 |
| Msa1209200 | Msa1437860 | 0.835311 | 1.806764e-56 | -8.615850e-47 |
| Msa1212730 | Msa1437860 | 0.809283 | 2.042776e-50 | -8.615850e-47 |
| Msa0531650 | Msa1437860 | 0.802054 | 6.730923e-49 | -8.615850e-47 |
| Msa0539410 | Msa1437860 | 0.835757 | 1.393542e-56 | -8.615850e-47 |
| Msa0581110 | Msa1437860 | 0.811018 | 8.632868e-51 | -8.615850e-47 |
| Msa0581280 | Msa1437860 | 0.835051 | 2.100766e-56 | -8.615850e-47 |
| Msa0595170 | Msa1437860 | 0.855096 | 7.933140e-62 | -8.615850e-47 |
| Msa0601150 | Msa1437860 | 0.811128 | 8.173228e-51 | -8.615850e-47 |
| Msa0878260 | Msa1437860 | 0.802306 | 5.973772e-49 | -8.615850e-47 |
| Msa0888810 | Msa1437860 | 0.803207 | 3.891317e-49 | -8.615850e-47 |
| Msa0943990 | Msa1437860 | 0.856534 | 3.015666e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437860 | MtrunA17_Chr7g0262991 | 96.162 | 495 | 19 | 0 | 1 | 495 | 465 | 959 | 0.0 | 946 |
| Msa1437860 | MtrunA17_Chr7g0254441 | 64.494 | 445 | 102 | 7 | 1 | 442 | 459 | 850 | 4.17e-132 | 403 |
| Msa1437860 | MtrunA17_Chr7g0262301 | 84.756 | 164 | 25 | 0 | 191 | 354 | 44 | 207 | 8.77e-84 | 258 |
| Msa1437860 | MtrunA17_Chr7g0234611 | 49.020 | 204 | 56 | 4 | 65 | 266 | 1 | 158 | 4.42e-43 | 150 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1437860 | AT4G11420.1 | 56.731 | 520 | 196 | 5 | 1 | 492 | 465 | 983 | 8.37e-148 | 448 |
Find 158 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATATCAGACGAGTATTT+TGG | 0.188395 | tig0028373:+3365 | Msa1437860:three_prime_UTR |
| TCAAGGATTCCCTAGAAATT+TGG | 0.239496 | tig0028373:-1593 | Msa1437860:intergenic |
| AAGGAGCCTCTTGTGTTCTT+TGG | 0.257731 | tig0028373:-748 | Msa1437860:intergenic |
| CAATCCCACTGGATCATAAA+TGG | 0.264502 | tig0028373:-3325 | Msa1437860:intergenic |
| GGGGCTGCTGCAGCAGCAGC+TGG | 0.264887 | tig0028373:-2889 | Msa1437860:intergenic |
| GGCTGAACGCCAAGCTAAAT+TGG | 0.281694 | tig0028373:+2714 | Msa1437860:CDS |
| ATCTGTAGGGCCAAATTTCT+AGG | 0.289773 | tig0028373:+1583 | Msa1437860:intron |
| GCTGCAGCAGCCCCAGCTCC+AGG | 0.290580 | tig0028373:+2898 | Msa1437860:CDS |
| GGAGAAGAAGCTTCAGAAAT+TGG | 0.302055 | tig0028373:+1659 | Msa1437860:CDS |
| AATTCTTCCTCATTTGGTTC+TGG | 0.310248 | tig0028373:+3036 | Msa1437860:CDS |
| ACCTCCTCCTCGCCGGAACT+TGG | 0.310856 | tig0028373:-2932 | Msa1437860:intergenic |
| GGCCAAAACCATGGATCATT+TGG | 0.313534 | tig0028373:+1680 | Msa1437860:CDS |
| TGATAGGAAACAATCAAAAC+TGG | 0.315349 | tig0028373:+692 | Msa1437860:CDS |
| CTTCAACTTGGTCATCTTCC+AGG | 0.315541 | tig0028373:+3076 | Msa1437860:CDS |
| TCAACTTACCCCTTCAATTA+CGG | 0.318023 | tig0028373:-1132 | Msa1437860:intergenic |
| TTCCAAATGATCCATGGTTT+TGG | 0.318570 | tig0028373:-1682 | Msa1437860:intergenic |
| GCAGCTGGAGCAGCAGTGCC+AGG | 0.320822 | tig0028373:-2874 | Msa1437860:intergenic |
| CAACTTACCCCTTCAATTAC+GGG | 0.323728 | tig0028373:-1131 | Msa1437860:intergenic |
| TTACCCCAACGATCTGCTTC+TGG | 0.328071 | tig0028373:-2976 | Msa1437860:intergenic |
| GATCGTAATTCTTCCTCATT+TGG | 0.328698 | tig0028373:+3030 | Msa1437860:CDS |
| GGAACGTATTTCCCTGGAGC+TGG | 0.333714 | tig0028373:-2910 | Msa1437860:intergenic |
| TCCTCATTTGGTTCTGGTGG+GGG | 0.346368 | tig0028373:+3042 | Msa1437860:CDS |
| TAGAATTCTAAAACTCAAAC+AGG | 0.349256 | tig0028373:-3218 | Msa1437860:intergenic |
| TCCTCCAGAAGCAGATCGTT+GGG | 0.357386 | tig0028373:+2972 | Msa1437860:CDS |
| AGAGCAACCAGCACAATATC+AGG | 0.372092 | tig0028373:-3166 | Msa1437860:intergenic |
| CTTCCTCATTTGGTTCTGGT+GGG | 0.373310 | tig0028373:+3040 | Msa1437860:CDS |
| CCCAACTTTGTCAGAGGTTG+TGG | 0.373901 | tig0028373:+725 | Msa1437860:CDS |
| AAAATTGAAGTATTATCTTA+AGG | 0.376850 | tig0028373:+2296 | Msa1437860:CDS |
| CATTTATGATCCAGTGGGAT+TGG | 0.381255 | tig0028373:+3326 | Msa1437860:three_prime_UTR |
| GGAGAAGAGGGAAGCATTGT+TGG | 0.382074 | tig0028373:+2795 | Msa1437860:CDS |
| ACCTATTGAATTCCGCTTCG+CGG | 0.385015 | tig0028373:-2203 | Msa1437860:intergenic |
| GGAAATACGTTCCCAAGTTC+CGG | 0.398968 | tig0028373:+2920 | Msa1437860:CDS |
| CCTGTCCGTCCAGTTGATCC+TGG | 0.400409 | tig0028373:+2856 | Msa1437860:CDS |
| CGAGGAGGAGGTGAAACAAC+AGG | 0.403757 | tig0028373:+2943 | Msa1437860:CDS |
| AAAGGCTGAGAGGGAGAAGA+GGG | 0.410460 | tig0028373:+2783 | Msa1437860:CDS |
| AAATGATTTGTCCTCCTGAT+AGG | 0.412493 | tig0028373:+676 | Msa1437860:CDS |
| GCAGCAGTGCCAGGATCAAC+TGG | 0.414042 | tig0028373:-2865 | Msa1437860:intergenic |
| ACCGCGAAGCGGAATTCAAT+AGG | 0.414418 | tig0028373:+2202 | Msa1437860:CDS |
| ATGAAGATTGAGAACTTAGC+TGG | 0.416118 | tig0028373:+70 | Msa1437860:CDS |
| TCTCCATTTCCTGTCTCTCC+CGG | 0.417919 | tig0028373:-1641 | Msa1437860:intergenic |
| GATAAAACAAAACTGAAAAC+AGG | 0.421105 | tig0028373:-3412 | Msa1437860:intergenic |
| TTCCTCATTTGGTTCTGGTG+GGG | 0.421834 | tig0028373:+3041 | Msa1437860:CDS |
| GGCCTAAGAGCTGGTTCAGC+AGG | 0.423168 | tig0028373:-2823 | Msa1437860:intergenic |
| TGCTCTTTCCAAATGATCCA+TGG | 0.429014 | tig0028373:-1688 | Msa1437860:intergenic |
| GTTCTTGCCTGATATTGTGC+TGG | 0.431907 | tig0028373:+3159 | Msa1437860:three_prime_UTR |
| TCTTCCTCATTTGGTTCTGG+TGG | 0.434827 | tig0028373:+3039 | Msa1437860:CDS |
| ACTAAGAGAAATTGAAGAAA+AGG | 0.436141 | tig0028373:+2765 | Msa1437860:CDS |
| CCTCCTCCTCGCCGGAACTT+GGG | 0.437831 | tig0028373:-2931 | Msa1437860:intergenic |
| TCAAGTACGATCACGCATCC+TGG | 0.446052 | tig0028373:-3094 | Msa1437860:intergenic |
| TGGAAGCTGAAAAGCTTTCA+AGG | 0.447111 | tig0028373:+1093 | Msa1437860:CDS |
| AAAAGGCTGAGAGGGAGAAG+AGG | 0.447531 | tig0028373:+2782 | Msa1437860:CDS |
| GACCTGCTGAACCAGCTCTT+AGG | 0.452937 | tig0028373:+2821 | Msa1437860:CDS |
| GAACGTATTTCCCTGGAGCT+GGG | 0.455189 | tig0028373:-2909 | Msa1437860:intergenic |
| TGAAAAGCTTTCAAGGAGAA+AGG | 0.462564 | tig0028373:+1100 | Msa1437860:CDS |
| GGACGGACAGGAGGCTCATA+AGG | 0.465355 | tig0028373:-2844 | Msa1437860:intergenic |
| TCAATAGGTTGAAGAAAGAC+AGG | 0.467259 | tig0028373:+2217 | Msa1437860:CDS |
| CTAAGCAGACAGCGCCATGC+TGG | 0.467723 | tig0028373:+1954 | Msa1437860:CDS |
| GCAGCAGGCCGGATGGTGAC+AGG | 0.468013 | tig0028373:+3004 | Msa1437860:CDS |
| TCCAATGTTTATGAACTCCT+TGG | 0.468095 | tig0028373:+3272 | Msa1437860:three_prime_UTR |
| CTCCTCCAGAAGCAGATCGT+TGG | 0.469492 | tig0028373:+2971 | Msa1437860:CDS |
| TCTTGAAGCTGATGGCTTGA+GGG | 0.471343 | tig0028373:+611 | Msa1437860:CDS |
| CCCAAGTTCCGGCGAGGAGG+AGG | 0.471702 | tig0028373:+2931 | Msa1437860:CDS |
| CAACGATCTGCTTCTGGAGG+AGG | 0.472979 | tig0028373:-2970 | Msa1437860:intergenic |
| TGCATATCAGCAGCGATTAG+TGG | 0.476367 | tig0028373:+1743 | Msa1437860:CDS |
| GAAATTTCTATCAATGAAAG+TGG | 0.476411 | tig0028373:+153 | Msa1437860:CDS |
| GAAAATCCATTATTGAGAAA+AGG | 0.478242 | tig0028373:+775 | Msa1437860:CDS |
| GCCACAACCTCTGACAAAGT+TGG | 0.484054 | tig0028373:-726 | Msa1437860:intergenic |
| CCACAACCTCTGACAAAGTT+GGG | 0.484521 | tig0028373:-725 | Msa1437860:intergenic |
| GAGAAGAGGGAAGCATTGTT+GGG | 0.484930 | tig0028373:+2796 | Msa1437860:CDS |
| AGAAGCCGAGGCTTTACGTC+TGG | 0.485994 | tig0028373:+1073 | Msa1437860:CDS |
| CGAACAACTCCGGGAGAGAC+AGG | 0.487611 | tig0028373:+1632 | Msa1437860:CDS |
| ACTCCGGGAGAGACAGGAAA+TGG | 0.488034 | tig0028373:+1638 | Msa1437860:CDS |
| TCAAAGAATCCAAAGGGAAA+AGG | 0.490575 | tig0028373:+1034 | Msa1437860:CDS |
| AACTTGGGAACGTATTTCCC+TGG | 0.493869 | tig0028373:-2916 | Msa1437860:intergenic |
| AGAACGACAGCTTCTTGAAA+AGG | 0.498078 | tig0028373:+809 | Msa1437860:CDS |
| GGAGAGGCTTAGTCGAATGA+TGG | 0.498886 | tig0028373:+1992 | Msa1437860:CDS |
| TTGTTTCACCTCCTCCTCGC+CGG | 0.500555 | tig0028373:-2939 | Msa1437860:intergenic |
| TGATCCAGTGGGATTGGATA+CGG | 0.501207 | tig0028373:+3332 | Msa1437860:three_prime_UTR |
| AGTTCTCAATCTTCATCGAT+TGG | 0.502020 | tig0028373:-63 | Msa1437860:intergenic |
| CGATCCCACCTGTCACCATC+CGG | 0.504085 | tig0028373:-3012 | Msa1437860:intergenic |
| AATTGAAGAAAAGGCTGAGA+GGG | 0.512136 | tig0028373:+2774 | Msa1437860:CDS |
| GAAAAGCTTTCAAGGAGAAA+GGG | 0.518287 | tig0028373:+1101 | Msa1437860:CDS |
| CCAGGATCAACTGGACGGAC+AGG | 0.522631 | tig0028373:-2856 | Msa1437860:intergenic |
| ACCAAGGAGTTCATAAACAT+TGG | 0.525353 | tig0028373:-3273 | Msa1437860:intergenic |
| GCGTGAGGAGGAAGAAGCTC+GGG | 0.529639 | tig0028373:+2344 | Msa1437860:CDS |
| CTATCTCATCCAATTTAGCT+TGG | 0.529887 | tig0028373:-2723 | Msa1437860:intergenic |
| GTCTTGAAGCTGATGGCTTG+AGG | 0.530493 | tig0028373:+610 | Msa1437860:CDS |
| TGATGGCTTGAGGGATCACT+TGG | 0.531074 | tig0028373:+620 | Msa1437860:CDS |
| GGCTCATAAGGCCTAAGAGC+TGG | 0.536976 | tig0028373:-2832 | Msa1437860:intergenic |
| CTGCAGCAGCCCCAGCTCCA+GGG | 0.538924 | tig0028373:+2899 | Msa1437860:CDS |
| GAAAATTCAAAGAATCCAAA+GGG | 0.541840 | tig0028373:+1028 | Msa1437860:CDS |
| ATTGAAGTATTATCTTAAGG+TGG | 0.542932 | tig0028373:+2299 | Msa1437860:CDS |
| GACGTTGGTCGAACAACTCC+GGG | 0.546261 | tig0028373:+1623 | Msa1437860:CDS |
| TGACGTTGGTCGAACAACTC+CGG | 0.546593 | tig0028373:+1622 | Msa1437860:CDS |
| ACAGGGAGGACCGTATCTCT+AGG | 0.551931 | tig0028373:+2235 | Msa1437860:CDS |
| GAGGAGGAGGTGAAACAACA+GGG | 0.553020 | tig0028373:+2944 | Msa1437860:CDS |
| AGCTTCCAGACGTAAAGCCT+CGG | 0.556052 | tig0028373:-1078 | Msa1437860:intergenic |
| GGAAAATTCAAAGAATCCAA+AGG | 0.556328 | tig0028373:+1027 | Msa1437860:CDS |
| CATTATTGAGAAAAGGAAAG+AGG | 0.560575 | tig0028373:+782 | Msa1437860:CDS |
| AGAGTTAATAAGATCCAAGA+AGG | 0.561059 | tig0028373:-3455 | Msa1437860:intergenic |
| TCTGTAGGGCCAAATTTCTA+GGG | 0.561705 | tig0028373:+1584 | Msa1437860:intron |
| TGCGTGAGGAGGAAGAAGCT+CGG | 0.561806 | tig0028373:+2343 | Msa1437860:CDS |
| TGAAGATTGAGAACTTAGCT+GGG | 0.571963 | tig0028373:+71 | Msa1437860:CDS |
| GTTCAAGGTCATCTTCAACT+TGG | 0.572493 | tig0028373:+3064 | Msa1437860:CDS |
| GCAGGCCGGATGGTGACAGG+TGG | 0.573758 | tig0028373:+3007 | Msa1437860:CDS |
| TCAGAAATTGGCCAAAACCA+TGG | 0.575799 | tig0028373:+1671 | Msa1437860:CDS |
| TGCTGGAGATCTCAATGAGA+AGG | 0.577519 | tig0028373:+1971 | Msa1437860:CDS |
| GAGAGGCTTAGTCGAATGAT+GGG | 0.578055 | tig0028373:+1993 | Msa1437860:CDS |
| CTGAACAATTGAATAAGGCA+AGG | 0.580743 | tig0028373:+652 | Msa1437860:CDS |
| ATTGCTCCCAACTTTGTCAG+AGG | 0.581414 | tig0028373:+719 | Msa1437860:CDS |
| TTTGATTGTTTCCTATCAGG+AGG | 0.581585 | tig0028373:-687 | Msa1437860:intergenic |
| TATCAGGCAAGAACCCCAAA+GGG | 0.584611 | tig0028373:-3150 | Msa1437860:intergenic |
| TGTTCCATTTATGATCCAGT+GGG | 0.584751 | tig0028373:+3321 | Msa1437860:three_prime_UTR |
| AACAGTAGCAGCAGGCCGGA+TGG | 0.585245 | tig0028373:+2997 | Msa1437860:CDS |
| TCTCAGAGTCTTGAAGCTGA+TGG | 0.588116 | tig0028373:+603 | Msa1437860:intron |
| GGGTAACAGTAGCAGCAGGC+CGG | 0.589125 | tig0028373:+2993 | Msa1437860:CDS |
| AGCAGCGATTAGTGGAAGAG+AGG | 0.590290 | tig0028373:+1751 | Msa1437860:CDS |
| AACGTATTTCCCTGGAGCTG+GGG | 0.590645 | tig0028373:-2908 | Msa1437860:intergenic |
| AAGAATCCAAAGGGAAAAGG+AGG | 0.591136 | tig0028373:+1037 | Msa1437860:CDS |
| TACTCTCCAGGAAACTGGAG+AGG | 0.595502 | tig0028373:+2262 | Msa1437860:CDS |
| GTTGGGGTAACAGTAGCAGC+AGG | 0.598534 | tig0028373:+2989 | Msa1437860:CDS |
| ATGAAGAAGCAGAGCAAAGG+CGG | 0.598613 | tig0028373:+982 | Msa1437860:CDS |
| GAGATCTCAATGAGAAGGAG+AGG | 0.599256 | tig0028373:+1976 | Msa1437860:CDS |
| ATCCTTGATGCAGTTGACGT+TGG | 0.599796 | tig0028373:+1608 | Msa1437860:CDS |
| AGAGTAAAATCCTAGAGATA+CGG | 0.601570 | tig0028373:-2245 | Msa1437860:intergenic |
| GACCAACGTCAACTGCATCA+AGG | 0.602329 | tig0028373:-1610 | Msa1437860:intergenic |
| AAGAGATAAAGAAGAAGCCG+AGG | 0.602354 | tig0028373:+1061 | Msa1437860:CDS |
| AAGACAGAAATTGCGTGAGG+AGG | 0.603400 | tig0028373:+2332 | Msa1437860:CDS |
| TTGATGAAGAAGCAGAGCAA+AGG | 0.605854 | tig0028373:+979 | Msa1437860:CDS |
| ATGTTCCATTTATGATCCAG+TGG | 0.607073 | tig0028373:+3320 | Msa1437860:three_prime_UTR |
| ATTACCGTATCCAATCCCAC+TGG | 0.607424 | tig0028373:-3336 | Msa1437860:intergenic |
| ACTCTCCAGGAAACTGGAGA+GGG | 0.610063 | tig0028373:+2263 | Msa1437860:CDS |
| ATATCAGGCAAGAACCCCAA+AGG | 0.621959 | tig0028373:-3151 | Msa1437860:intergenic |
| CAGGCCGGATGGTGACAGGT+GGG | 0.622641 | tig0028373:+3008 | Msa1437860:CDS |
| GAAGAAGCTCGGGAGCGTGA+AGG | 0.623829 | tig0028373:+2354 | Msa1437860:CDS |
| AAATTGAAGAAAAGGCTGAG+AGG | 0.628286 | tig0028373:+2773 | Msa1437860:CDS |
| CAATAGGTTGAAGAAAGACA+GGG | 0.633169 | tig0028373:+2218 | Msa1437860:CDS |
| GGATCAACTGGACGGACAGG+AGG | 0.635133 | tig0028373:-2853 | Msa1437860:intergenic |
| GCAAAATGAGCAGTAAATCA+CGG | 0.637255 | tig0028373:-3128 | Msa1437860:intergenic |
| TCTCATTGAGATCTCCAGCA+TGG | 0.638426 | tig0028373:-1968 | Msa1437860:intergenic |
| CCCCAACGATCTGCTTCTGG+AGG | 0.639482 | tig0028373:-2973 | Msa1437860:intergenic |
| AACGCGAGGAGGAGTCAAAG+AGG | 0.639800 | tig0028373:+940 | Msa1437860:CDS |
| GGAAAGAGCAAAGAGAGAAG+AGG | 0.640905 | tig0028373:+1701 | Msa1437860:CDS |
| GTTCCCAAGTTCCGGCGAGG+AGG | 0.642650 | tig0028373:+2928 | Msa1437860:CDS |
| TTGTGGCCAAAGAACACAAG+AGG | 0.642857 | tig0028373:+742 | Msa1437860:CDS |
| AGTTGTGAGTCACCGCGAAG+CGG | 0.645879 | tig0028373:+2191 | Msa1437860:CDS |
| CAGTGCCAGGATCAACTGGA+CGG | 0.663272 | tig0028373:-2861 | Msa1437860:intergenic |
| GAGAAGACAGAAATTGCGTG+AGG | 0.663361 | tig0028373:+2329 | Msa1437860:CDS |
| CGTGTTCTTCAACAGAACCA+AGG | 0.665798 | tig0028373:-3289 | Msa1437860:intergenic |
| CCTCCAGAAGCAGATCGTTG+GGG | 0.672181 | tig0028373:+2973 | Msa1437860:CDS |
| TACGTTCCCAAGTTCCGGCG+AGG | 0.672418 | tig0028373:+2925 | Msa1437860:CDS |
| AGGAGGAGGTGAAACAACAG+GGG | 0.677894 | tig0028373:+2945 | Msa1437860:CDS |
| GATAGGAAACAATCAAAACT+GGG | 0.677940 | tig0028373:+693 | Msa1437860:CDS |
| TGATATGCAGCATCAATCAG+CGG | 0.691724 | tig0028373:-1729 | Msa1437860:intergenic |
| TGGTAAACATTAGACACCTG+AGG | 0.706238 | tig0028373:-43 | Msa1437860:intergenic |
| TTGCAACTGAGATTGAGCAG+AGG | 0.710712 | tig0028373:+1006 | Msa1437860:CDS |
| AGAATTCTAAAACTCAAACA+GGG | 0.719811 | tig0028373:-3217 | Msa1437860:intergenic |
| TAGGTTGAAGAAAGACAGGG+AGG | 0.748741 | tig0028373:+2221 | Msa1437860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCAAATTTAAACATATAA+AGG | - | tig0028373:911-930 | Msa1437860:intergenic | 10.0% |
| !! | TTCTGTTTAAATTAATGTTA+TGG | + | tig0028373:252-271 | Msa1437860:intron | 15.0% |
| !!! | GTTTAAATTTGAAATTTTGA+AGG | + | tig0028373:917-936 | Msa1437860:intron | 15.0% |
| !! | AGTAATATAATATATTGGAT+GGG | - | tig0028373:1218-1237 | Msa1437860:intergenic | 15.0% |
| !! | AAGTAATATAATATATTGGA+TGG | - | tig0028373:1219-1238 | Msa1437860:intergenic | 15.0% |
| !!! | ATCATTTTAAAATTTTGGAT+GGG | - | tig0028373:1295-1314 | Msa1437860:intergenic | 15.0% |
| !! | AAATAACATCAATTGTTAAA+AGG | - | tig0028373:2071-2090 | Msa1437860:intergenic | 15.0% |
| !! | TACTAGGTAAATTTAATAAA+TGG | - | tig0028373:2119-2138 | Msa1437860:intergenic | 15.0% |
| !!! | AAAATTGAAGTATTATCTTA+AGG | + | tig0028373:2296-2315 | Msa1437860:CDS | 15.0% |
| !!! | TTGTTTTATCGAAAATAAAA+AGG | + | tig0028373:3425-3444 | Msa1437860:three_prime_UTR | 15.0% |
| !!! | TTTTCCTTTATCTTAGTATT+AGG | + | tig0028373:216-235 | Msa1437860:intron | 20.0% |
| !! | TGTTTAAATTAATGTTATGG+TGG | + | tig0028373:255-274 | Msa1437860:intron | 20.0% |
| !! | TCTAATTATACCACAAATAT+GGG | - | tig0028373:1194-1213 | Msa1437860:intergenic | 20.0% |
| !! | GTAATATAATATATTGGATG+GGG | - | tig0028373:1217-1236 | Msa1437860:intergenic | 20.0% |
| !! | CGCTAAGTAATATAATATAT+TGG | - | tig0028373:1223-1242 | Msa1437860:intergenic | 20.0% |
| !!! | GATCATTTTAAAATTTTGGA+TGG | - | tig0028373:1296-1315 | Msa1437860:intergenic | 20.0% |
| !!! | GAGAGATCATTTTAAAATTT+TGG | - | tig0028373:1300-1319 | Msa1437860:intergenic | 20.0% |
| !! | AAAAATTGAATTGTTTCCAA+GGG | - | tig0028373:1818-1837 | Msa1437860:intergenic | 20.0% |
| !! | TAAAAATTGAATTGTTTCCA+AGG | - | tig0028373:1819-1838 | Msa1437860:intergenic | 20.0% |
| !!! | ATCATTATTGATTTGTTTTC+TGG | + | tig0028373:2379-2398 | Msa1437860:intron | 20.0% |
| !! | TTTCAATACTATATGATATG+GGG | - | tig0028373:2430-2449 | Msa1437860:intergenic | 20.0% |
| !! | CTTTCAATACTATATGATAT+GGG | - | tig0028373:2431-2450 | Msa1437860:intergenic | 20.0% |
| !! | TGAAATACAAAAGATAGAAT+TGG | - | tig0028373:2526-2545 | Msa1437860:intergenic | 20.0% |
| ! | GAAATTTCTATCAATGAAAG+TGG | + | tig0028373:153-172 | Msa1437860:CDS | 25.0% |
| !! | AAATTACAACATTTTTCGTG+TGG | - | tig0028373:180-199 | Msa1437860:intergenic | 25.0% |
| !! | TGTTGTAATTTTCTGTAAGA+CGG | + | tig0028373:189-208 | Msa1437860:CDS | 25.0% |
| ! | TCTTCCTAATACTAAGATAA+AGG | - | tig0028373:223-242 | Msa1437860:intergenic | 25.0% |
| !!! | TGGTTGATTTTTGATTTAAG+TGG | + | tig0028373:332-351 | Msa1437860:intron | 25.0% |
| ! | AATGTATTCCTCAAATAACA+TGG | - | tig0028373:363-382 | Msa1437860:intergenic | 25.0% |
| ! | TTATGTAAACAACTTATCCT+AGG | - | tig0028373:471-490 | Msa1437860:intergenic | 25.0% |
| !! | TCTCATTTTACCAAATCTTA+CGG | + | tig0028373:563-582 | Msa1437860:intron | 25.0% |
| !! | TTTTGCTGAACAATTGAATA+AGG | + | tig0028373:647-666 | Msa1437860:CDS | 25.0% |
| ! | GAAAATCCATTATTGAGAAA+AGG | + | tig0028373:775-794 | Msa1437860:CDS | 25.0% |
| ! | TATTATTCATTTCGCTCATT+AGG | + | tig0028373:855-874 | Msa1437860:intron | 25.0% |
| ! | GAAAATTCAAAGAATCCAAA+GGG | + | tig0028373:1028-1047 | Msa1437860:CDS | 25.0% |
| ! | TAATTATACCACAAATATGG+GGG | - | tig0028373:1192-1211 | Msa1437860:intergenic | 25.0% |
| ! | CTAATTATACCACAAATATG+GGG | - | tig0028373:1193-1212 | Msa1437860:intergenic | 25.0% |
| ! | GTCTAATTATACCACAAATA+TGG | - | tig0028373:1195-1214 | Msa1437860:intergenic | 25.0% |
| !! | AAGCTTGTTTAAATAGAATG+CGG | - | tig0028373:1882-1901 | Msa1437860:intergenic | 25.0% |
| ! | AGTTAGTATCATAAACTCTT+AGG | + | tig0028373:2022-2041 | Msa1437860:intron | 25.0% |
| ! | AACATCAATTGTTAAAAGGT+AGG | - | tig0028373:2067-2086 | Msa1437860:intergenic | 25.0% |
| ! | GATAAAACATTAGACATACT+AGG | - | tig0028373:2135-2154 | Msa1437860:intergenic | 25.0% |
| !! | ATTGAAGTATTATCTTAAGG+TGG | + | tig0028373:2299-2318 | Msa1437860:CDS | 25.0% |
| ! | TTCAATACTATATGATATGG+GGG | - | tig0028373:2429-2448 | Msa1437860:intergenic | 25.0% |
| ! | CCTTTCAATACTATATGATA+TGG | - | tig0028373:2432-2451 | Msa1437860:intergenic | 25.0% |
| !! | CCATATCATATAGTATTGAA+AGG | + | tig0028373:2429-2448 | Msa1437860:intron | 25.0% |
| ! | CACATGTTAACTAAATACAA+AGG | - | tig0028373:2652-2671 | Msa1437860:intergenic | 25.0% |
| ! | CTTTGTATTTAGTTAACATG+TGG | + | tig0028373:2650-2669 | Msa1437860:intron | 25.0% |
| ! | ACTAAGAGAAATTGAAGAAA+AGG | + | tig0028373:2765-2784 | Msa1437860:CDS | 25.0% |
| !!! | AGAATTCTAAAACTCAAACA+GGG | - | tig0028373:3220-3239 | Msa1437860:intergenic | 25.0% |
| !!! | TAGAATTCTAAAACTCAAAC+AGG | - | tig0028373:3221-3240 | Msa1437860:intergenic | 25.0% |
| !! | TCATAAATGGAACATTTTGT+TGG | - | tig0028373:3315-3334 | Msa1437860:intergenic | 25.0% |
| ! | GATAAAACAAAACTGAAAAC+AGG | - | tig0028373:3415-3434 | Msa1437860:intergenic | 25.0% |
| !! | ATTAATGTTATGGTGGATCA+TGG | + | tig0028373:262-281 | Msa1437860:intron | 30.0% |
| ! | TAGGATTTGGAATGATTAGT+TGG | + | tig0028373:286-305 | Msa1437860:intron | 30.0% |
| ! | AGGATTTGGAATGATTAGTT+GGG | + | tig0028373:287-306 | Msa1437860:intron | 30.0% |
| ! | ATTCGATTGTTGTTCAATCA+TGG | + | tig0028373:380-399 | Msa1437860:intron | 30.0% |
| !! | TAACGGATTATTTCCATGTT+GGG | - | tig0028373:424-443 | Msa1437860:intergenic | 30.0% |
| !! | ATAACGGATTATTTCCATGT+TGG | - | tig0028373:425-444 | Msa1437860:intergenic | 30.0% |
| CATAGGTGCAAACAAAATAA+CGG | - | tig0028373:441-460 | Msa1437860:intergenic | 30.0% | |
| !!! | AGTTTTGATTGTTTCCTATC+AGG | - | tig0028373:693-712 | Msa1437860:intergenic | 30.0% |
| TGATAGGAAACAATCAAAAC+TGG | + | tig0028373:692-711 | Msa1437860:CDS | 30.0% | |
| GATAGGAAACAATCAAAACT+GGG | + | tig0028373:693-712 | Msa1437860:CDS | 30.0% | |
| ! | CTCTTTCCTTTTCTCAATAA+TGG | - | tig0028373:784-803 | Msa1437860:intergenic | 30.0% |
| CATTATTGAGAAAAGGAAAG+AGG | + | tig0028373:782-801 | Msa1437860:CDS | 30.0% | |
| GGAAAATTCAAAGAATCCAA+AGG | + | tig0028373:1027-1046 | Msa1437860:CDS | 30.0% | |
| ! | AAAATTTTGGATGGGTAGTA+TGG | - | tig0028373:1287-1306 | Msa1437860:intergenic | 30.0% |
| !! | AATAAAACTCTGCTTTTGAG+TGG | - | tig0028373:1398-1417 | Msa1437860:intergenic | 30.0% |
| ! | ATGTCTAATGTTTTATCACG+TGG | + | tig0028373:2138-2157 | Msa1437860:intron | 30.0% |
| ! | TAATGTTTTATCACGTGGTT+TGG | + | tig0028373:2143-2162 | Msa1437860:intron | 30.0% |
| AGAGTAAAATCCTAGAGATA+CGG | - | tig0028373:2248-2267 | Msa1437860:intergenic | 30.0% | |
| AAATAATCACAAGTCTGTGT+TGG | - | tig0028373:2495-2514 | Msa1437860:intergenic | 30.0% | |
| TACAAAGGATGATTATCTAC+TGG | - | tig0028373:2637-2656 | Msa1437860:intergenic | 30.0% | |
| ! | TTCATATCAGACGAGTATTT+TGG | + | tig0028373:3365-3384 | Msa1437860:three_prime_UTR | 30.0% |
| ATCGAAAATAAAAAGGTCTG+CGG | + | tig0028373:3432-3451 | Msa1437860:three_prime_UTR | 30.0% | |
| AGTTCTCAATCTTCATCGAT+TGG | - | tig0028373:66-85 | None:intergenic | 35.0% | |
| ATGAAGATTGAGAACTTAGC+TGG | + | tig0028373:70-89 | Msa1437860:CDS | 35.0% | |
| TGAAGATTGAGAACTTAGCT+GGG | + | tig0028373:71-90 | Msa1437860:CDS | 35.0% | |
| CGACTGAAAAATCGAAGAAA+GGG | - | tig0028373:102-121 | Msa1437860:intergenic | 35.0% | |
| ACGACTGAAAAATCGAAGAA+AGG | - | tig0028373:103-122 | Msa1437860:intergenic | 35.0% | |
| !! | TTTCTTCGATTTTTCAGTCG+TGG | + | tig0028373:102-121 | Msa1437860:CDS | 35.0% |
| ! | GGATTTGGAATGATTAGTTG+GGG | + | tig0028373:288-307 | Msa1437860:intron | 35.0% |
| ! | TGGTTTGACCATGTTATTTG+AGG | + | tig0028373:352-371 | Msa1437860:intron | 35.0% |
| CTGAATCATTATTCCCAACA+TGG | + | tig0028373:408-427 | Msa1437860:intron | 35.0% | |
| GTTGTTTACATAAACTCTCG+TGG | + | tig0028373:478-497 | Msa1437860:intron | 35.0% | |
| ATAAACTCTCGTGGTTTAGA+TGG | + | tig0028373:487-506 | Msa1437860:intron | 35.0% | |
| CAAGCAAATTCCGTAAGATT+TGG | - | tig0028373:576-595 | Msa1437860:intergenic | 35.0% | |
| ! | CAAATCTTACGGAATTTGCT+TGG | + | tig0028373:574-593 | Msa1437860:intron | 35.0% |
| CTGAACAATTGAATAAGGCA+AGG | + | tig0028373:652-671 | Msa1437860:CDS | 35.0% | |
| ! | AAATGATTTGTCCTCCTGAT+AGG | + | tig0028373:676-695 | Msa1437860:CDS | 35.0% |
| TTTGATTGTTTCCTATCAGG+AGG | - | tig0028373:690-709 | Msa1437860:intergenic | 35.0% | |
| !!! | CAATAATGGATTTTCGAGCA+AGG | - | tig0028373:770-789 | Msa1437860:intergenic | 35.0% |
| TCAAAGAATCCAAAGGGAAA+AGG | + | tig0028373:1034-1053 | Msa1437860:CDS | 35.0% | |
| TGAAAAGCTTTCAAGGAGAA+AGG | + | tig0028373:1100-1119 | Msa1437860:CDS | 35.0% | |
| GAAAAGCTTTCAAGGAGAAA+GGG | + | tig0028373:1101-1120 | Msa1437860:CDS | 35.0% | |
| TCAACTTACCCCTTCAATTA+CGG | - | tig0028373:1135-1154 | Msa1437860:intergenic | 35.0% | |
| ACCTAAAGAAACCCAATTAG+TGG | + | tig0028373:1481-1500 | Msa1437860:intron | 35.0% | |
| ACCACTAATTGGGTTTCTTT+AGG | - | tig0028373:1485-1504 | Msa1437860:intergenic | 35.0% | |
| TGACAATACACACTATCTGT+AGG | + | tig0028373:1569-1588 | Msa1437860:intron | 35.0% | |
| GACAATACACACTATCTGTA+GGG | + | tig0028373:1570-1589 | Msa1437860:intron | 35.0% | |
| TCAAGGATTCCCTAGAAATT+TGG | - | tig0028373:1596-1615 | Msa1437860:intergenic | 35.0% | |
| ! | TTCCAAATGATCCATGGTTT+TGG | - | tig0028373:1685-1704 | Msa1437860:intergenic | 35.0% |
| ! | ACACATTTTTCCTCTCAAGT+TGG | + | tig0028373:1838-1857 | Msa1437860:intron | 35.0% |
| ! | AGATTTTGTTCCAACTTGAG+AGG | - | tig0028373:1851-1870 | Msa1437860:intergenic | 35.0% |
| TAGGCTACTCTTCTATATCT+TGG | + | tig0028373:2041-2060 | Msa1437860:intron | 35.0% | |
| ! | TCAATAGGTTGAAGAAAGAC+AGG | + | tig0028373:2217-2236 | Msa1437860:CDS | 35.0% |
| ! | CAATAGGTTGAAGAAAGACA+GGG | + | tig0028373:2218-2237 | Msa1437860:CDS | 35.0% |
| TTAGTAAATGTCTGTTGCTC+TGG | + | tig0028373:2584-2603 | Msa1437860:intron | 35.0% | |
| ! | TACTGGTTGTGTGTAAAAGA+TGG | - | tig0028373:2620-2639 | Msa1437860:intergenic | 35.0% |
| TGAGAGAAAAAAGAAGGAAC+AGG | + | tig0028373:2693-2712 | Msa1437860:CDS | 35.0% | |
| CTATCTCATCCAATTTAGCT+TGG | - | tig0028373:2726-2745 | Msa1437860:intergenic | 35.0% | |
| AAATTGAAGAAAAGGCTGAG+AGG | + | tig0028373:2773-2792 | Msa1437860:CDS | 35.0% | |
| AATTGAAGAAAAGGCTGAGA+GGG | + | tig0028373:2774-2793 | Msa1437860:CDS | 35.0% | |
| GATCGTAATTCTTCCTCATT+TGG | + | tig0028373:3030-3049 | Msa1437860:CDS | 35.0% | |
| ! | AATTCTTCCTCATTTGGTTC+TGG | + | tig0028373:3036-3055 | Msa1437860:CDS | 35.0% |
| GCAAAATGAGCAGTAAATCA+CGG | - | tig0028373:3131-3150 | Msa1437860:intergenic | 35.0% | |
| TCCAATGTTTATGAACTCCT+TGG | + | tig0028373:3272-3291 | Msa1437860:three_prime_UTR | 35.0% | |
| ACCAAGGAGTTCATAAACAT+TGG | - | tig0028373:3276-3295 | Msa1437860:intergenic | 35.0% | |
| ATGTTCCATTTATGATCCAG+TGG | + | tig0028373:3320-3339 | Msa1437860:three_prime_UTR | 35.0% | |
| TGTTCCATTTATGATCCAGT+GGG | + | tig0028373:3321-3340 | Msa1437860:three_prime_UTR | 35.0% | |
| !! | TGTTATGGTGGATCATGGAT+AGG | + | tig0028373:267-286 | Msa1437860:intron | 40.0% |
| ! | TTTGGAATGATTAGTTGGGG+CGG | + | tig0028373:291-310 | Msa1437860:intron | 40.0% |
| GGCACATATTACTGAGAAGA+TGG | + | tig0028373:312-331 | Msa1437860:intron | 40.0% | |
| TTATCCTAGGCATCTGACAT+AGG | - | tig0028373:458-477 | Msa1437860:intergenic | 40.0% | |
| AGAACGACAGCTTCTTGAAA+AGG | + | tig0028373:809-828 | Msa1437860:CDS | 40.0% | |
| !! | TGAAATTTTGAAGGAACGCG+AGG | + | tig0028373:926-945 | Msa1437860:intron | 40.0% |
| TTGATGAAGAAGCAGAGCAA+AGG | + | tig0028373:979-998 | Msa1437860:CDS | 40.0% | |
| AAGAATCCAAAGGGAAAAGG+AGG | + | tig0028373:1037-1056 | Msa1437860:CDS | 40.0% | |
| AAGAGATAAAGAAGAAGCCG+AGG | + | tig0028373:1061-1080 | Msa1437860:CDS | 40.0% | |
| TGGAAGCTGAAAAGCTTTCA+AGG | + | tig0028373:1093-1112 | Msa1437860:CDS | 40.0% | |
| GCAAAAAGCCCGTAATTGAA+GGG | + | tig0028373:1123-1142 | Msa1437860:CDS | 40.0% | |
| CAAAAAGCCCGTAATTGAAG+GGG | + | tig0028373:1124-1143 | Msa1437860:CDS | 40.0% | |
| CAACTTACCCCTTCAATTAC+GGG | - | tig0028373:1134-1153 | Msa1437860:intergenic | 40.0% | |
| ! | GGATGCTCTAAATTGAATGC+AGG | - | tig0028373:1160-1179 | Msa1437860:intergenic | 40.0% |
| CAGAATGGACACCACTAATT+GGG | - | tig0028373:1495-1514 | Msa1437860:intergenic | 40.0% | |
| TCAGAATGGACACCACTAAT+TGG | - | tig0028373:1496-1515 | Msa1437860:intergenic | 40.0% | |
| ATCTGTAGGGCCAAATTTCT+AGG | + | tig0028373:1583-1602 | Msa1437860:intron | 40.0% | |
| TCTGTAGGGCCAAATTTCTA+GGG | + | tig0028373:1584-1603 | Msa1437860:intron | 40.0% | |
| GGAGAAGAAGCTTCAGAAAT+TGG | + | tig0028373:1659-1678 | Msa1437860:CDS | 40.0% | |
| TCAGAAATTGGCCAAAACCA+TGG | + | tig0028373:1671-1690 | Msa1437860:CDS | 40.0% | |
| TGCTCTTTCCAAATGATCCA+TGG | - | tig0028373:1691-1710 | Msa1437860:intergenic | 40.0% | |
| TGATATGCAGCATCAATCAG+CGG | - | tig0028373:1732-1751 | Msa1437860:intergenic | 40.0% | |
| TATGTCTACTTGTGTTCCCT+TGG | + | tig0028373:1799-1818 | Msa1437860:intron | 40.0% | |
| CCTCTAGCTGCATAAAACAA+TGG | - | tig0028373:1929-1948 | Msa1437860:intergenic | 40.0% | |
| !! | CCATTGTTTTATGCAGCTAG+AGG | + | tig0028373:1926-1945 | Msa1437860:intron | 40.0% |
| !!! | TCTCTAGGATTTTACTCTCC+AGG | + | tig0028373:2250-2269 | Msa1437860:CDS | 40.0% |
| ! | GATTTTACTCTCCAGGAAAC+TGG | + | tig0028373:2257-2276 | Msa1437860:CDS | 40.0% |
| TAATCACAAGTCTGTGTTGG+CGG | - | tig0028373:2492-2511 | Msa1437860:intergenic | 40.0% | |
| !!! | TTCTTTTTTCTCTCAGCCTC+TGG | - | tig0028373:2688-2707 | Msa1437860:intergenic | 40.0% |
| AGAGGCTGAGAGAAAAAAGA+AGG | + | tig0028373:2687-2706 | Msa1437860:intron | 40.0% | |
| GTTCAAGGTCATCTTCAACT+TGG | + | tig0028373:3064-3083 | Msa1437860:CDS | 40.0% | |
| ! | TTACTGCTCATTTTGCCCTT+TGG | + | tig0028373:3135-3154 | Msa1437860:three_prime_UTR | 40.0% |
| ! | TACTGCTCATTTTGCCCTTT+GGG | + | tig0028373:3136-3155 | Msa1437860:three_prime_UTR | 40.0% |
| CAATCCCACTGGATCATAAA+TGG | - | tig0028373:3328-3347 | Msa1437860:intergenic | 40.0% | |
| CATTTATGATCCAGTGGGAT+TGG | + | tig0028373:3326-3345 | Msa1437860:three_prime_UTR | 40.0% | |
| GGTGGATCATGGATAGGATT+TGG | + | tig0028373:273-292 | Msa1437860:intron | 45.0% | |
| TCTCAGAGTCTTGAAGCTGA+TGG | + | tig0028373:603-622 | Msa1437860:intron | 45.0% | |
| TCTTGAAGCTGATGGCTTGA+GGG | + | tig0028373:611-630 | Msa1437860:CDS | 45.0% | |
| ATTGCTCCCAACTTTGTCAG+AGG | + | tig0028373:719-738 | Msa1437860:CDS | 45.0% | |
| CCACAACCTCTGACAAAGTT+GGG | - | tig0028373:728-747 | Msa1437860:intergenic | 45.0% | |
| TTGTGGCCAAAGAACACAAG+AGG | + | tig0028373:742-761 | Msa1437860:CDS | 45.0% | |
| AAGGAGCCTCTTGTGTTCTT+TGG | - | tig0028373:751-770 | Msa1437860:intergenic | 45.0% | |
| !! | AATTTTGAAGGAACGCGAGG+AGG | + | tig0028373:929-948 | Msa1437860:intron | 45.0% |
| ATGAAGAAGCAGAGCAAAGG+CGG | + | tig0028373:982-1001 | Msa1437860:CDS | 45.0% | |
| TTGCAACTGAGATTGAGCAG+AGG | + | tig0028373:1006-1025 | Msa1437860:CDS | 45.0% | |
| ! | CTCTTTCCTCCTTTTCCCTT+TGG | - | tig0028373:1046-1065 | Msa1437860:intergenic | 45.0% |
| GGCAAAAAGCCCGTAATTGA+AGG | + | tig0028373:1122-1141 | Msa1437860:CDS | 45.0% | |
| ATACCACAAATATGGGGGCA+TGG | - | tig0028373:1187-1206 | Msa1437860:intergenic | 45.0% | |
| GTATGCACAGCTTGTCAGAA+TGG | - | tig0028373:1510-1529 | Msa1437860:intergenic | 45.0% | |
| ATCCTTGATGCAGTTGACGT+TGG | + | tig0028373:1608-1627 | Msa1437860:CDS | 45.0% | |
| GGCCAAAACCATGGATCATT+TGG | + | tig0028373:1680-1699 | Msa1437860:CDS | 45.0% | |
| GGAAAGAGCAAAGAGAGAAG+AGG | + | tig0028373:1701-1720 | Msa1437860:CDS | 45.0% | |
| TGCATATCAGCAGCGATTAG+TGG | + | tig0028373:1743-1762 | Msa1437860:CDS | 45.0% | |
| TCTCATTGAGATCTCCAGCA+TGG | - | tig0028373:1971-1990 | Msa1437860:intergenic | 45.0% | |
| TGCTGGAGATCTCAATGAGA+AGG | + | tig0028373:1971-1990 | Msa1437860:CDS | 45.0% | |
| GAGATCTCAATGAGAAGGAG+AGG | + | tig0028373:1976-1995 | Msa1437860:CDS | 45.0% | |
| GAGAGGCTTAGTCGAATGAT+GGG | + | tig0028373:1993-2012 | Msa1437860:CDS | 45.0% | |
| !! | ATCACGTGGTTTGGCTTTAC+AGG | + | tig0028373:2152-2171 | Msa1437860:intron | 45.0% |
| ACCTATTGAATTCCGCTTCG+CGG | - | tig0028373:2206-2225 | Msa1437860:intergenic | 45.0% | |
| ! | TAGGTTGAAGAAAGACAGGG+AGG | + | tig0028373:2221-2240 | Msa1437860:CDS | 45.0% |
| GAGAAGACAGAAATTGCGTG+AGG | + | tig0028373:2329-2348 | Msa1437860:CDS | 45.0% | |
| AAGACAGAAATTGCGTGAGG+AGG | + | tig0028373:2332-2351 | Msa1437860:CDS | 45.0% | |
| ATGATATGGGGGAAAACGCT+TGG | - | tig0028373:2418-2437 | Msa1437860:intergenic | 45.0% | |
| !! | ATGTCTGTTGCTCTGGAATC+AGG | + | tig0028373:2591-2610 | Msa1437860:intron | 45.0% |
| !! | TGTCTGTTGCTCTGGAATCA+GGG | + | tig0028373:2592-2611 | Msa1437860:intron | 45.0% |
| ! | GTGGTTTTTCTGAACTCCAG+AGG | + | tig0028373:2669-2688 | Msa1437860:intron | 45.0% |
| !! | GAGAAGAGGGAAGCATTGTT+GGG | + | tig0028373:2796-2815 | Msa1437860:CDS | 45.0% |
| AACTTGGGAACGTATTTCCC+TGG | - | tig0028373:2919-2938 | Msa1437860:intergenic | 45.0% | |
| GGAAATACGTTCCCAAGTTC+CGG | + | tig0028373:2920-2939 | Msa1437860:CDS | 45.0% | |
| !! | TCTTCCTCATTTGGTTCTGG+TGG | + | tig0028373:3039-3058 | Msa1437860:CDS | 45.0% |
| !! | CTTCCTCATTTGGTTCTGGT+GGG | + | tig0028373:3040-3059 | Msa1437860:CDS | 45.0% |
| !! | TTCCTCATTTGGTTCTGGTG+GGG | + | tig0028373:3041-3060 | Msa1437860:CDS | 45.0% |
| CTTCAACTTGGTCATCTTCC+AGG | + | tig0028373:3076-3095 | Msa1437860:CDS | 45.0% | |
| ! | ACTGCTCATTTTGCCCTTTG+GGG | + | tig0028373:3137-3156 | Msa1437860:three_prime_UTR | 45.0% |
| TATCAGGCAAGAACCCCAAA+GGG | - | tig0028373:3153-3172 | Msa1437860:intergenic | 45.0% | |
| ATATCAGGCAAGAACCCCAA+AGG | - | tig0028373:3154-3173 | Msa1437860:intergenic | 45.0% | |
| GTTCTTGCCTGATATTGTGC+TGG | + | tig0028373:3159-3178 | Msa1437860:three_prime_UTR | 45.0% | |
| AGAGCAACCAGCACAATATC+AGG | - | tig0028373:3169-3188 | Msa1437860:intergenic | 45.0% | |
| CGTGTTCTTCAACAGAACCA+AGG | - | tig0028373:3292-3311 | Msa1437860:intergenic | 45.0% | |
| TGATCCAGTGGGATTGGATA+CGG | + | tig0028373:3332-3351 | Msa1437860:three_prime_UTR | 45.0% | |
| ATTACCGTATCCAATCCCAC+TGG | - | tig0028373:3339-3358 | Msa1437860:intergenic | 45.0% | |
| !! | ATAATAATAAATAAACTAAA+AGG | - | tig0028373:841-860 | Msa1437860:intergenic | 5.0% |
| TGCACCTATGTCAGATGCCT+AGG | + | tig0028373:451-470 | Msa1437860:intron | 50.0% | |
| GTCTTGAAGCTGATGGCTTG+AGG | + | tig0028373:610-629 | Msa1437860:CDS | 50.0% | |
| TGATGGCTTGAGGGATCACT+TGG | + | tig0028373:620-639 | Msa1437860:CDS | 50.0% | |
| CCCAACTTTGTCAGAGGTTG+TGG | + | tig0028373:725-744 | Msa1437860:CDS | 50.0% | |
| GCCACAACCTCTGACAAAGT+TGG | - | tig0028373:729-748 | Msa1437860:intergenic | 50.0% | |
| AGCTTCCAGACGTAAAGCCT+CGG | - | tig0028373:1081-1100 | Msa1437860:intergenic | 50.0% | |
| ! | CAAATATGGGGGCATGGATG+TGG | - | tig0028373:1181-1200 | Msa1437860:intergenic | 50.0% |
| CATCCATGCCCCCATATTTG+TGG | + | tig0028373:1181-1200 | Msa1437860:intron | 50.0% | |
| GACCAACGTCAACTGCATCA+AGG | - | tig0028373:1613-1632 | Msa1437860:intergenic | 50.0% | |
| TGACGTTGGTCGAACAACTC+CGG | + | tig0028373:1622-1641 | Msa1437860:CDS | 50.0% | |
| TCTCCATTTCCTGTCTCTCC+CGG | - | tig0028373:1644-1663 | Msa1437860:intergenic | 50.0% | |
| AGCAGCGATTAGTGGAAGAG+AGG | + | tig0028373:1751-1770 | Msa1437860:CDS | 50.0% | |
| GGAGAGGCTTAGTCGAATGA+TGG | + | tig0028373:1992-2011 | Msa1437860:CDS | 50.0% | |
| ACCGCGAAGCGGAATTCAAT+AGG | + | tig0028373:2202-2221 | Msa1437860:CDS | 50.0% | |
| TACTCTCCAGGAAACTGGAG+AGG | + | tig0028373:2262-2281 | Msa1437860:CDS | 50.0% | |
| ACTCTCCAGGAAACTGGAGA+GGG | + | tig0028373:2263-2282 | Msa1437860:CDS | 50.0% | |
| ! | CTTTTCCCTCTCCAGTTTCC+TGG | - | tig0028373:2271-2290 | Msa1437860:intergenic | 50.0% |
| GGCTGAACGCCAAGCTAAAT+TGG | + | tig0028373:2714-2733 | Msa1437860:CDS | 50.0% | |
| AAAAGGCTGAGAGGGAGAAG+AGG | + | tig0028373:2782-2801 | Msa1437860:CDS | 50.0% | |
| AAAGGCTGAGAGGGAGAAGA+GGG | + | tig0028373:2783-2802 | Msa1437860:CDS | 50.0% | |
| !! | GGAGAAGAGGGAAGCATTGT+TGG | + | tig0028373:2795-2814 | Msa1437860:CDS | 50.0% |
| AACGTATTTCCCTGGAGCTG+GGG | - | tig0028373:2911-2930 | Msa1437860:intergenic | 50.0% | |
| GAACGTATTTCCCTGGAGCT+GGG | - | tig0028373:2912-2931 | Msa1437860:intergenic | 50.0% | |
| GAGGAGGAGGTGAAACAACA+GGG | + | tig0028373:2944-2963 | Msa1437860:CDS | 50.0% | |
| AGGAGGAGGTGAAACAACAG+GGG | + | tig0028373:2945-2964 | Msa1437860:CDS | 50.0% | |
| TCCTCCAGAAGCAGATCGTT+GGG | + | tig0028373:2972-2991 | Msa1437860:CDS | 50.0% | |
| TTACCCCAACGATCTGCTTC+TGG | - | tig0028373:2979-2998 | Msa1437860:intergenic | 50.0% | |
| !! | TCCTCATTTGGTTCTGGTGG+GGG | + | tig0028373:3042-3061 | Msa1437860:CDS | 50.0% |
| TCAAGTACGATCACGCATCC+TGG | - | tig0028373:3097-3116 | Msa1437860:intergenic | 50.0% | |
| AAAAAGGTCTGCGGCCTTCT+TGG | + | tig0028373:3441-3460 | Msa1437860:three_prime_UTR | 50.0% | |
| AACGCGAGGAGGAGTCAAAG+AGG | + | tig0028373:940-959 | Msa1437860:CDS | 55.0% | |
| AGAAGCCGAGGCTTTACGTC+TGG | + | tig0028373:1073-1092 | Msa1437860:CDS | 55.0% | |
| ACCGTTGCTCTGCATGGGTA+CGG | + | tig0028373:1444-1463 | Msa1437860:intron | 55.0% | |
| GACGTTGGTCGAACAACTCC+GGG | + | tig0028373:1623-1642 | Msa1437860:CDS | 55.0% | |
| ACTCCGGGAGAGACAGGAAA+TGG | + | tig0028373:1638-1657 | Msa1437860:CDS | 55.0% | |
| AGTTGTGAGTCACCGCGAAG+CGG | + | tig0028373:2191-2210 | Msa1437860:CDS | 55.0% | |
| ACAGGGAGGACCGTATCTCT+AGG | + | tig0028373:2235-2254 | Msa1437860:CDS | 55.0% | |
| TGCGTGAGGAGGAAGAAGCT+CGG | + | tig0028373:2343-2362 | Msa1437860:CDS | 55.0% | |
| GACCTGCTGAACCAGCTCTT+AGG | + | tig0028373:2821-2840 | Msa1437860:CDS | 55.0% | |
| GGCTCATAAGGCCTAAGAGC+TGG | - | tig0028373:2835-2854 | Msa1437860:intergenic | 55.0% | |
| CAGTGCCAGGATCAACTGGA+CGG | - | tig0028373:2864-2883 | Msa1437860:intergenic | 55.0% | |
| GGAACGTATTTCCCTGGAGC+TGG | - | tig0028373:2913-2932 | Msa1437860:intergenic | 55.0% | |
| TTGTTTCACCTCCTCCTCGC+CGG | - | tig0028373:2942-2961 | Msa1437860:intergenic | 55.0% | |
| CGAGGAGGAGGTGAAACAAC+AGG | + | tig0028373:2943-2962 | Msa1437860:CDS | 55.0% | |
| ! | CAACGATCTGCTTCTGGAGG+AGG | - | tig0028373:2973-2992 | Msa1437860:intergenic | 55.0% |
| CTCCTCCAGAAGCAGATCGT+TGG | + | tig0028373:2971-2990 | Msa1437860:CDS | 55.0% | |
| CCTCCAGAAGCAGATCGTTG+GGG | + | tig0028373:2973-2992 | Msa1437860:CDS | 55.0% | |
| GTTGGGGTAACAGTAGCAGC+AGG | + | tig0028373:2989-3008 | Msa1437860:CDS | 55.0% | |
| ACCCCCACCAGAACCAAATG+AGG | - | tig0028373:3046-3065 | Msa1437860:intergenic | 55.0% | |
| !! | TTGGTTCTGGTGGGGGTTCA+AGG | + | tig0028373:3049-3068 | Msa1437860:CDS | 55.0% |
| ACAGCCACCGTTGCTCTGCA+TGG | + | tig0028373:1438-1457 | Msa1437860:intron | 60.0% | |
| CAGCCACCGTTGCTCTGCAT+GGG | + | tig0028373:1439-1458 | Msa1437860:intron | 60.0% | |
| GTACCCATGCAGAGCAACGG+TGG | - | tig0028373:1445-1464 | Msa1437860:intergenic | 60.0% | |
| CCCGTACCCATGCAGAGCAA+CGG | - | tig0028373:1448-1467 | Msa1437860:intergenic | 60.0% | |
| CCGTTGCTCTGCATGGGTAC+GGG | + | tig0028373:1445-1464 | Msa1437860:intron | 60.0% | |
| CGTTGCTCTGCATGGGTACG+GGG | + | tig0028373:1446-1465 | Msa1437860:intron | 60.0% | |
| CGAACAACTCCGGGAGAGAC+AGG | + | tig0028373:1632-1651 | Msa1437860:CDS | 60.0% | |
| CTAAGCAGACAGCGCCATGC+TGG | + | tig0028373:1954-1973 | Msa1437860:CDS | 60.0% | |
| GCGTGAGGAGGAAGAAGCTC+GGG | + | tig0028373:2344-2363 | Msa1437860:CDS | 60.0% | |
| ! | GAAGAAGCTCGGGAGCGTGA+AGG | + | tig0028373:2354-2373 | Msa1437860:CDS | 60.0% |
| ! | GGCCTAAGAGCTGGTTCAGC+AGG | - | tig0028373:2826-2845 | Msa1437860:intergenic | 60.0% |
| GGACGGACAGGAGGCTCATA+AGG | - | tig0028373:2847-2866 | Msa1437860:intergenic | 60.0% | |
| GGATCAACTGGACGGACAGG+AGG | - | tig0028373:2856-2875 | Msa1437860:intergenic | 60.0% | |
| CCAGGATCAACTGGACGGAC+AGG | - | tig0028373:2859-2878 | Msa1437860:intergenic | 60.0% | |
| CCTGTCCGTCCAGTTGATCC+TGG | + | tig0028373:2856-2875 | Msa1437860:CDS | 60.0% | |
| GCAGCAGTGCCAGGATCAAC+TGG | - | tig0028373:2868-2887 | Msa1437860:intergenic | 60.0% | |
| TACGTTCCCAAGTTCCGGCG+AGG | + | tig0028373:2925-2944 | Msa1437860:CDS | 60.0% | |
| CCCCAACGATCTGCTTCTGG+AGG | - | tig0028373:2976-2995 | Msa1437860:intergenic | 60.0% | |
| GGGTAACAGTAGCAGCAGGC+CGG | + | tig0028373:2993-3012 | Msa1437860:CDS | 60.0% | |
| AACAGTAGCAGCAGGCCGGA+TGG | + | tig0028373:2997-3016 | Msa1437860:CDS | 60.0% | |
| CGATCCCACCTGTCACCATC+CGG | - | tig0028373:3015-3034 | Msa1437860:intergenic | 60.0% | |
| GTTCCCAAGTTCCGGCGAGG+AGG | + | tig0028373:2928-2947 | Msa1437860:CDS | 65.0% | |
| CCTCCTCCTCGCCGGAACTT+GGG | - | tig0028373:2934-2953 | Msa1437860:intergenic | 65.0% | |
| ACCTCCTCCTCGCCGGAACT+TGG | - | tig0028373:2935-2954 | Msa1437860:intergenic | 65.0% | |
| CAGGCCGGATGGTGACAGGT+GGG | + | tig0028373:3008-3027 | Msa1437860:CDS | 65.0% | |
| GCAGCTGGAGCAGCAGTGCC+AGG | - | tig0028373:2877-2896 | Msa1437860:intergenic | 70.0% | |
| CTGCAGCAGCCCCAGCTCCA+GGG | + | tig0028373:2899-2918 | Msa1437860:CDS | 70.0% | |
| CCCAAGTTCCGGCGAGGAGG+AGG | + | tig0028373:2931-2950 | Msa1437860:CDS | 70.0% | |
| GCAGCAGGCCGGATGGTGAC+AGG | + | tig0028373:3004-3023 | Msa1437860:CDS | 70.0% | |
| GCAGGCCGGATGGTGACAGG+TGG | + | tig0028373:3007-3026 | Msa1437860:CDS | 70.0% | |
| GGGGCTGCTGCAGCAGCAGC+TGG | - | tig0028373:2892-2911 | Msa1437860:intergenic | 75.0% | |
| GCTGCAGCAGCCCCAGCTCC+AGG | + | tig0028373:2898-2917 | Msa1437860:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0028373 | gene | 46 | 3464 | 46 | ID=Msa1437860;Name=Msa1437860 |
| tig0028373 | mRNA | 46 | 3464 | 46 | ID=Msa1437860-mRNA-1;Parent=Msa1437860;Name=Msa1437860-mRNA-1;_AED=0.07;_eAED=0.07;_QI=24|1|1|1|1|1|7|348|495 |
| tig0028373 | exon | 46 | 210 | 46 | ID=Msa1437860-mRNA-1:exon:10948;Parent=Msa1437860-mRNA-1 |
| tig0028373 | exon | 609 | 830 | 609 | ID=Msa1437860-mRNA-1:exon:10949;Parent=Msa1437860-mRNA-1 |
| tig0028373 | exon | 939 | 1145 | 939 | ID=Msa1437860-mRNA-1:exon:10950;Parent=Msa1437860-mRNA-1 |
| tig0028373 | exon | 1591 | 1797 | 1591 | ID=Msa1437860-mRNA-1:exon:10951;Parent=Msa1437860-mRNA-1 |
| tig0028373 | exon | 1942 | 2022 | 1942 | ID=Msa1437860-mRNA-1:exon:10952;Parent=Msa1437860-mRNA-1 |
| tig0028373 | exon | 2174 | 2375 | 2174 | ID=Msa1437860-mRNA-1:exon:10953;Parent=Msa1437860-mRNA-1 |
| tig0028373 | exon | 2689 | 3464 | 2689 | ID=Msa1437860-mRNA-1:exon:10954;Parent=Msa1437860-mRNA-1 |
| tig0028373 | five_prime_UTR | 46 | 69 | 46 | ID=Msa1437860-mRNA-1:five_prime_utr;Parent=Msa1437860-mRNA-1 |
| tig0028373 | CDS | 70 | 210 | 70 | ID=Msa1437860-mRNA-1:cds;Parent=Msa1437860-mRNA-1 |
| tig0028373 | CDS | 609 | 830 | 609 | ID=Msa1437860-mRNA-1:cds;Parent=Msa1437860-mRNA-1 |
| tig0028373 | CDS | 939 | 1145 | 939 | ID=Msa1437860-mRNA-1:cds;Parent=Msa1437860-mRNA-1 |
| tig0028373 | CDS | 1591 | 1797 | 1591 | ID=Msa1437860-mRNA-1:cds;Parent=Msa1437860-mRNA-1 |
| tig0028373 | CDS | 1942 | 2022 | 1942 | ID=Msa1437860-mRNA-1:cds;Parent=Msa1437860-mRNA-1 |
| tig0028373 | CDS | 2174 | 2375 | 2174 | ID=Msa1437860-mRNA-1:cds;Parent=Msa1437860-mRNA-1 |
| tig0028373 | CDS | 2689 | 3116 | 2689 | ID=Msa1437860-mRNA-1:cds;Parent=Msa1437860-mRNA-1 |
| tig0028373 | three_prime_UTR | 3117 | 3464 | 3117 | ID=Msa1437860-mRNA-1:three_prime_utr;Parent=Msa1437860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
