Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302840 | sp|Q9S9P3|FDM1_ARATH | 52.525 | 495 | 219 | 7 | 18 | 499 | 17 | 508 | 1.35e-167 | 492 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302840 | G7JHX7 | 88.719 | 523 | 56 | 1 | 1 | 520 | 54 | 576 | 0.0 | 888 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0083550 | Msa1302840 | 0.816193 | 6.272823e-52 | -8.615850e-47 |
| Msa0090040 | Msa1302840 | -0.811940 | 5.443222e-51 | -8.615850e-47 |
| Msa0826650 | Msa1302840 | 0.806847 | 6.741079e-50 | -8.615850e-47 |
| Msa1302840 | Msa1371080 | -0.813564 | 2.400967e-51 | -8.615850e-47 |
| Msa0864690 | Msa1302840 | 0.807647 | 4.563627e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302840 | MtrunA17_Chr4g0074301 | 88.719 | 523 | 56 | 1 | 1 | 520 | 1 | 523 | 0.0 | 887 |
| Msa1302840 | MtrunA17_Chr4g0070931 | 86.754 | 536 | 66 | 2 | 1 | 531 | 1 | 536 | 0.0 | 885 |
| Msa1302840 | MtrunA17_Chr4g0070931 | 94.595 | 37 | 2 | 0 | 502 | 538 | 593 | 629 | 1.04e-14 | 77.0 |
| Msa1302840 | MtrunA17_Chr4g0001231 | 80.247 | 486 | 90 | 4 | 22 | 504 | 22 | 504 | 0.0 | 753 |
| Msa1302840 | MtrunA17_Chr4g0074271 | 83.166 | 398 | 46 | 3 | 1 | 395 | 18 | 397 | 0.0 | 610 |
| Msa1302840 | MtrunA17_Chr3g0111661 | 40.000 | 525 | 290 | 9 | 1 | 505 | 1 | 520 | 2.06e-118 | 363 |
| Msa1302840 | MtrunA17_Chr5g0435301 | 38.433 | 536 | 290 | 13 | 4 | 505 | 471 | 1000 | 2.28e-97 | 319 |
| Msa1302840 | MtrunA17_Chr5g0435301 | 32.877 | 146 | 85 | 5 | 1 | 144 | 1 | 135 | 3.38e-15 | 79.0 |
| Msa1302840 | MtrunA17_Chr5g0435301 | 41.860 | 86 | 44 | 3 | 19 | 103 | 131 | 211 | 3.38e-14 | 75.9 |
| Msa1302840 | MtrunA17_Chr5g0435301 | 38.372 | 86 | 48 | 2 | 19 | 103 | 247 | 328 | 2.12e-13 | 73.2 |
| Msa1302840 | MtrunA17_Chr5g0435301 | 37.624 | 101 | 59 | 3 | 5 | 101 | 353 | 453 | 3.79e-11 | 66.2 |
| Msa1302840 | MtrunA17_Chr2g0328251 | 32.860 | 563 | 295 | 16 | 13 | 505 | 10 | 559 | 1.64e-60 | 212 |
| Msa1302840 | MtrunA17_Chr2g0328241 | 32.270 | 533 | 296 | 13 | 26 | 505 | 23 | 543 | 2.77e-53 | 191 |
| Msa1302840 | MtrunA17_Chr4g0024031 | 29.167 | 552 | 283 | 15 | 26 | 505 | 23 | 538 | 5.61e-45 | 168 |
| Msa1302840 | MtrunA17_Chr2g0327251 | 32.678 | 407 | 225 | 9 | 116 | 505 | 79 | 453 | 5.81e-43 | 161 |
| Msa1302840 | MtrunA17_Chr4g0071151 | 41.463 | 123 | 61 | 3 | 383 | 505 | 3 | 114 | 1.49e-15 | 76.6 |
| Msa1302840 | MtrunA17_Chr2g0328231 | 43.103 | 116 | 59 | 4 | 393 | 505 | 120 | 231 | 3.17e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1302840 | AT1G15910.1 | 52.525 | 495 | 219 | 7 | 18 | 499 | 17 | 508 | 1.37e-168 | 492 |
| Msa1302840 | AT4G00380.1 | 51.503 | 499 | 225 | 6 | 19 | 503 | 18 | 513 | 3.13e-165 | 483 |
| Msa1302840 | AT4G00380.3 | 51.503 | 499 | 225 | 6 | 19 | 503 | 18 | 513 | 3.13e-165 | 483 |
| Msa1302840 | AT4G00380.2 | 47.782 | 496 | 220 | 7 | 19 | 503 | 18 | 485 | 1.31e-146 | 435 |
| Msa1302840 | AT1G80790.1 | 49.087 | 493 | 233 | 8 | 19 | 498 | 19 | 506 | 4.62e-144 | 429 |
| Msa1302840 | AT1G80790.2 | 49.087 | 493 | 233 | 8 | 19 | 498 | 19 | 506 | 4.62e-144 | 429 |
| Msa1302840 | AT1G80790.3 | 48.936 | 423 | 203 | 6 | 19 | 431 | 19 | 438 | 1.97e-134 | 399 |
| Msa1302840 | AT3G48670.2 | 36.523 | 512 | 294 | 8 | 16 | 505 | 21 | 523 | 4.09e-97 | 308 |
| Msa1302840 | AT3G48670.1 | 36.523 | 512 | 294 | 8 | 16 | 505 | 21 | 523 | 4.09e-97 | 308 |
| Msa1302840 | AT3G48670.3 | 36.523 | 512 | 294 | 8 | 16 | 505 | 21 | 523 | 4.09e-97 | 308 |
| Msa1302840 | AT3G12550.3 | 33.333 | 513 | 298 | 12 | 24 | 503 | 13 | 514 | 2.17e-73 | 244 |
| Msa1302840 | AT3G12550.5 | 33.333 | 513 | 298 | 12 | 24 | 503 | 13 | 514 | 1.10e-72 | 244 |
| Msa1302840 | AT3G12550.4 | 33.333 | 513 | 298 | 12 | 24 | 503 | 13 | 514 | 1.17e-72 | 244 |
| Msa1302840 | AT3G12550.2 | 33.333 | 513 | 298 | 12 | 24 | 503 | 13 | 514 | 1.17e-72 | 244 |
| Msa1302840 | AT3G12550.1 | 33.333 | 513 | 298 | 12 | 24 | 503 | 13 | 514 | 1.17e-72 | 244 |
| Msa1302840 | AT1G13790.2 | 33.416 | 401 | 237 | 7 | 118 | 499 | 219 | 608 | 5.34e-51 | 186 |
| Msa1302840 | AT1G13790.2 | 35.897 | 78 | 50 | 0 | 11 | 88 | 2 | 79 | 1.35e-12 | 70.9 |
| Msa1302840 | AT1G13790.1 | 33.416 | 401 | 237 | 7 | 118 | 499 | 219 | 608 | 5.34e-51 | 186 |
| Msa1302840 | AT1G13790.1 | 35.897 | 78 | 50 | 0 | 11 | 88 | 2 | 79 | 1.35e-12 | 70.9 |
| Msa1302840 | AT5G59390.2 | 32.048 | 415 | 242 | 11 | 112 | 503 | 28 | 425 | 1.27e-46 | 171 |
| Msa1302840 | AT5G59390.4 | 32.048 | 415 | 242 | 11 | 112 | 503 | 28 | 425 | 1.27e-46 | 171 |
| Msa1302840 | AT5G59390.3 | 32.048 | 415 | 242 | 11 | 112 | 503 | 28 | 425 | 1.27e-46 | 171 |
| Msa1302840 | AT4G01180.1 | 31.785 | 409 | 244 | 9 | 114 | 503 | 28 | 420 | 3.49e-46 | 170 |
| Msa1302840 | AT5G59390.1 | 31.667 | 420 | 242 | 12 | 112 | 503 | 28 | 430 | 2.19e-44 | 165 |
| Msa1302840 | AT5G59390.5 | 31.667 | 420 | 242 | 12 | 112 | 503 | 28 | 430 | 2.19e-44 | 165 |
| Msa1302840 | AT4G01780.1 | 28.022 | 364 | 160 | 9 | 123 | 483 | 79 | 343 | 2.68e-26 | 112 |
| Msa1302840 | AT2G16490.1 | 35.065 | 154 | 70 | 5 | 408 | 537 | 1 | 148 | 1.56e-14 | 72.4 |
Find 151 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTGAAGGATCTTGTTTA+AGG | 0.184121 | 8_3:-65495374 | None:intergenic |
| GGTAATAATAAAACTAATAT+TGG | 0.209949 | 8_3:+65495949 | Msa1302840:CDS |
| CCATCCTTTAACTCCTTATA+AGG | 0.231876 | 8_3:-65493059 | None:intergenic |
| AAGAGCAACCTTAATGATTC+TGG | 0.249360 | 8_3:+65493380 | Msa1302840:CDS |
| GAAGAAAGAGTTCAAATATA+AGG | 0.256178 | 8_3:+65493142 | Msa1302840:CDS |
| CAAACCTTATAAGGAGTTAA+AGG | 0.267169 | 8_3:+65493055 | Msa1302840:CDS |
| GCCAGTATCCAGAATCATTA+AGG | 0.269275 | 8_3:-65493388 | None:intergenic |
| ATGGAGATTGAGGAACTAAA+AGG | 0.270338 | 8_3:+65495430 | Msa1302840:CDS |
| CTCCTCCAGCATCCTACTTA+TGG | 0.276527 | 8_3:-65493816 | None:intergenic |
| TACTGAATTGGAAGAAAGTT+TGG | 0.280963 | 8_3:+65495525 | Msa1302840:CDS |
| CAGGCCAGTTCAGACATTTA+TGG | 0.299736 | 8_3:+65493587 | Msa1302840:CDS |
| ATACTCTGACAAACCTTATA+AGG | 0.314776 | 8_3:+65493046 | Msa1302840:CDS |
| ACTAATGATGAAACGGTTAC+TGG | 0.320368 | 8_3:+65496392 | Msa1302840:three_prime_UTR |
| CAGCATACCCTTCAGCATTA+AGG | 0.320481 | 8_3:-65495990 | None:intergenic |
| GGAAGAAATGAGTACTGAAT+TGG | 0.340118 | 8_3:+65495513 | Msa1302840:CDS |
| ATTTGTAATGTCAATTTCAT+TGG | 0.353548 | 8_3:-65493747 | None:intergenic |
| GGAAAAGTTGCGTAATGAAT+TGG | 0.355859 | 8_3:+65494122 | Msa1302840:CDS |
| TTTGGTCTGCTTCATTTACT+AGG | 0.363332 | 8_3:-65493265 | None:intergenic |
| AGGAAGGCTGAGAACAATTT+CGG | 0.365624 | 8_3:+65493673 | Msa1302840:CDS |
| GTTTCATCATTAGTTCAAAC+TGG | 0.370603 | 8_3:-65496383 | None:intergenic |
| CGATCAAGAGAGGCAGAAAC+TGG | 0.373050 | 8_3:+65494206 | Msa1302840:CDS |
| GAGTAAAATGTGAGGGGATG+TGG | 0.380422 | 8_3:-65491207 | None:intergenic |
| TGAGGAGGTGCGAAGGATCT+TGG | 0.385235 | 8_3:+65494092 | Msa1302840:CDS |
| ATAAATATATTATAAGTAAT+AGG | 0.387139 | 8_3:+65496294 | Msa1302840:three_prime_UTR |
| ACCTTAATGATTCTGGATAC+TGG | 0.387551 | 8_3:+65493387 | Msa1302840:CDS |
| AATTGTATGCAGAGCTTCAA+TGG | 0.388855 | 8_3:+65492974 | Msa1302840:intron |
| GAAAAGTAGGATCAATTTCA+TGG | 0.390528 | 8_3:+65496238 | Msa1302840:three_prime_UTR |
| TTGCAAGTTATGAAACATCT+TGG | 0.395938 | 8_3:+65495457 | Msa1302840:CDS |
| GGCCAATCGGGGAGTACCTT+CGG | 0.401670 | 8_3:+65493645 | Msa1302840:CDS |
| CTTAAACAAGATCCTTCAAT+TGG | 0.401905 | 8_3:+65495375 | Msa1302840:CDS |
| CTTGTAGTTCATCATTGCTC+TGG | 0.417100 | 8_3:-65495591 | None:intergenic |
| AATGTGAGGGGATGTGGGAC+CGG | 0.417236 | 8_3:-65491201 | None:intergenic |
| GGATGTCCATGTATTCTTCA+TGG | 0.417376 | 8_3:+65493439 | Msa1302840:CDS |
| GAGGAATGAGTTACTCTTGT+TGG | 0.420705 | 8_3:+65495140 | Msa1302840:CDS |
| AAGAGTAAGAGTTGCTCGTC+GGG | 0.421143 | 8_3:-65491252 | None:intergenic |
| CAGGCTTATTGAAGAGCAAA+AGG | 0.427969 | 8_3:+65495200 | Msa1302840:CDS |
| GTAATAATAAAACTAATATT+GGG | 0.428154 | 8_3:+65495950 | Msa1302840:CDS |
| GTCTGCTTCATTTACTAGGT+CGG | 0.430421 | 8_3:-65493261 | None:intergenic |
| CACAAAGTGAAGAATTTAAA+CGG | 0.430749 | 8_3:+65493086 | Msa1302840:CDS |
| TGAAAGAGAAAATAGAAAAT+CGG | 0.433278 | 8_3:+65493715 | Msa1302840:CDS |
| TTGACAGCTTCGACCAAAGC+CGG | 0.434672 | 8_3:-65493296 | None:intergenic |
| TATAATTGTGGAGGGCCAAT+CGG | 0.436933 | 8_3:+65493632 | Msa1302840:CDS |
| CCCATGATGTTTAGTTTCAA+AGG | 0.437487 | 8_3:-65493537 | None:intergenic |
| AAACAGAAACGCCAAACAAA+AGG | 0.444045 | 8_3:+65493205 | Msa1302840:CDS |
| GTGGACTTCATTGTTTATTG+TGG | 0.449455 | 8_3:+65496325 | Msa1302840:three_prime_UTR |
| GTGGGACCGGGCTTCTCTTA+CGG | 0.449595 | 8_3:-65491188 | None:intergenic |
| AGATCCTTCGCACCTCCTCA+TGG | 0.450183 | 8_3:-65494089 | None:intergenic |
| TAATTCTCAACCTGCGGTAC+AGG | 0.455932 | 8_3:-65493323 | None:intergenic |
| GCGAAGGATCTTGGAAGAAC+AGG | 0.456862 | 8_3:+65494101 | Msa1302840:CDS |
| CAGTTTCTGCCTCTCTTGAT+CGG | 0.457451 | 8_3:-65494205 | None:intergenic |
| ATGTGAGGGGATGTGGGACC+GGG | 0.458322 | 8_3:-65491200 | None:intergenic |
| GTTACTCTTGTTGGCTTCAA+AGG | 0.458746 | 8_3:+65495149 | Msa1302840:CDS |
| ATAATTGTGGAGGGCCAATC+GGG | 0.458752 | 8_3:+65493633 | Msa1302840:CDS |
| TGGAGATTGAGGAACTAAAA+GGG | 0.462021 | 8_3:+65495431 | Msa1302840:CDS |
| TTTCAGTGAGTCTGAGATTG+AGG | 0.464919 | 8_3:+65493022 | Msa1302840:CDS |
| TAGCTGATGAGAATGTCTTC+AGG | 0.469727 | 8_3:+65495181 | Msa1302840:CDS |
| TCCTTTGAAACTAAACATCA+TGG | 0.472800 | 8_3:+65493536 | Msa1302840:CDS |
| CGCAAGAGAGGATAGGCAAA+AGG | 0.473650 | 8_3:+65496102 | Msa1302840:exon |
| ATTTGAGCTATGGAACTTCA+AGG | 0.478463 | 8_3:+65496014 | Msa1302840:CDS |
| TTCCGAAGGTACTCCCCGAT+TGG | 0.479350 | 8_3:-65493647 | None:intergenic |
| TGCTGAACCTTTGCTTACTC+CGG | 0.483792 | 8_3:-65493183 | None:intergenic |
| CCATCCATAAATGTCTGAAC+TGG | 0.485326 | 8_3:-65493591 | None:intergenic |
| CAATGTCGAGTTGGAAAAGT+AGG | 0.486269 | 8_3:+65496225 | Msa1302840:three_prime_UTR |
| GTAGTGCTGTACCTTGACTT+TGG | 0.487037 | 8_3:+65496265 | Msa1302840:three_prime_UTR |
| TGACAGCTTCGACCAAAGCC+GGG | 0.488259 | 8_3:-65493295 | None:intergenic |
| TAATATTGGGACGAAAAGAA+TGG | 0.490015 | 8_3:+65495963 | Msa1302840:CDS |
| CACCATCCATGAAGAATACA+TGG | 0.492568 | 8_3:-65493445 | None:intergenic |
| TTGCTCGTCGGGAAGGGCAG+CGG | 0.497567 | 8_3:-65491241 | None:intergenic |
| AAAGGCAAACCACCTCGCTC+TGG | 0.499352 | 8_3:+65493223 | Msa1302840:CDS |
| GATTTGATGCAACATGCAAC+CGG | 0.499938 | 8_3:+65493164 | Msa1302840:CDS |
| AAAATTAGAAATGGAGATTG+AGG | 0.501255 | 8_3:+65495420 | Msa1302840:CDS |
| TCAGCCTTCCTTTGTTCCGA+AGG | 0.504609 | 8_3:-65493661 | None:intergenic |
| GGATGCTGGAGGAGAAAGAC+AGG | 0.505595 | 8_3:+65493825 | Msa1302840:CDS |
| TAATGTCAATTTCATTGGCT+AGG | 0.506445 | 8_3:-65493742 | None:intergenic |
| CAGTTCAGACATTTATGGAT+GGG | 0.508021 | 8_3:+65493592 | Msa1302840:CDS |
| GAAGAAGGAATGGAATTCAA+TGG | 0.511745 | 8_3:+65493559 | Msa1302840:CDS |
| CATGTCCATAAGTAGGATGC+TGG | 0.514097 | 8_3:+65493811 | Msa1302840:CDS |
| AACATCATGGGAAGAAGGAA+TGG | 0.514921 | 8_3:+65493549 | Msa1302840:CDS |
| CGCAGGTTGAGAATTATGTC+TGG | 0.517832 | 8_3:+65493330 | Msa1302840:CDS |
| AATTATGTCTGGCCATGGAC+AGG | 0.519380 | 8_3:+65493341 | Msa1302840:CDS |
| CTCAGGTGCCCATATTGTGC+TGG | 0.519768 | 8_3:+65493113 | Msa1302840:CDS |
| AACTAAACATCATGGGAAGA+AGG | 0.520666 | 8_3:+65493544 | Msa1302840:CDS |
| CCAGTTCAGACATTTATGGA+TGG | 0.523268 | 8_3:+65493591 | Msa1302840:CDS |
| AATATTGGGACGAAAAGAAT+GGG | 0.525422 | 8_3:+65495964 | Msa1302840:CDS |
| AGTTTGAACTAATGATGAAA+CGG | 0.526588 | 8_3:+65496385 | Msa1302840:three_prime_UTR |
| ATTTGCAAAGTACAGACCAT+TGG | 0.526943 | 8_3:+65493418 | Msa1302840:CDS |
| CTTATTTAGATCTCTGCTCC+AGG | 0.528367 | 8_3:-65494169 | None:intergenic |
| GATCCTTCGCACCTCCTCAT+GGG | 0.531486 | 8_3:-65494088 | None:intergenic |
| ATGGAATTCAATGGACATGC+AGG | 0.532227 | 8_3:+65493568 | Msa1302840:CDS |
| GGGGTTAAATGAAATGCTGA+AGG | 0.533320 | 8_3:+65495927 | Msa1302840:intron |
| TAAGAGTTGCTCGTCGGGAA+GGG | 0.533798 | 8_3:-65491247 | None:intergenic |
| AGTAAAATGTGAGGGGATGT+GGG | 0.539880 | 8_3:-65491206 | None:intergenic |
| CGTGAAGATGATTATAATTG+TGG | 0.540581 | 8_3:+65493620 | Msa1302840:CDS |
| TGATTCTGGATACTGGCTAA+AGG | 0.547223 | 8_3:+65493394 | Msa1302840:CDS |
| TAGTAGACTTCATCAATGAC+TGG | 0.548076 | 8_3:+65493480 | Msa1302840:CDS |
| GAAAAGAGAGAACTATATGC+AGG | 0.548639 | 8_3:-65491166 | None:intergenic |
| CTTCATGGATGGTGACACTC+AGG | 0.551198 | 8_3:+65493454 | Msa1302840:CDS |
| AAATGCGGAAGCTTGATACC+TGG | 0.551489 | 8_3:+65494151 | Msa1302840:CDS |
| GTAAGAGTTGCTCGTCGGGA+AGG | 0.552659 | 8_3:-65491248 | None:intergenic |
| ACTGGAAGAGGACAAGAAGA+AGG | 0.555312 | 8_3:+65494224 | Msa1302840:CDS |
| TTGAGAATTATGTCTGGCCA+TGG | 0.559406 | 8_3:+65493336 | Msa1302840:CDS |
| AGAGGATCATGTCCATAAGT+AGG | 0.561441 | 8_3:+65493804 | Msa1302840:CDS |
| ATGGGAGACCTTAATGCTGA+AGG | 0.562568 | 8_3:+65495982 | Msa1302840:CDS |
| TGAATTGGAAGAAAGTTTGG+AGG | 0.564539 | 8_3:+65495528 | Msa1302840:CDS |
| AAAAGTAGGATCAATTTCAT+GGG | 0.570668 | 8_3:+65496239 | Msa1302840:three_prime_UTR |
| TGTCAACCAACCTGTACCGC+AGG | 0.572117 | 8_3:+65493313 | Msa1302840:CDS |
| TCTGGCGCTCCTTGTCAATG+AGG | 0.572379 | 8_3:-65495573 | None:intergenic |
| GGTATGCTGAATTTGAGCTA+TGG | 0.573218 | 8_3:+65496004 | Msa1302840:CDS |
| AGCAGACCAAATACCTCCCC+CGG | 0.574685 | 8_3:+65493277 | Msa1302840:CDS |
| GACTTCATCAATGACTGGAA+TGG | 0.577060 | 8_3:+65493485 | Msa1302840:CDS |
| GGAGCATCTCAATGTCGAGT+TGG | 0.582945 | 8_3:+65496216 | Msa1302840:intron |
| ACTTAAGCGCAAGAGAGGAT+AGG | 0.584806 | 8_3:+65496095 | Msa1302840:CDS |
| GAAGATGATTATAATTGTGG+AGG | 0.585641 | 8_3:+65493623 | Msa1302840:CDS |
| AGAAGTTATTACTTATATCG+TGG | 0.586754 | 8_3:+65496059 | Msa1302840:CDS |
| AGTACCTTCGGAACAAAGGA+AGG | 0.587192 | 8_3:+65493657 | Msa1302840:CDS |
| AGAGAGGCAGAAACTGGAAG+AGG | 0.587763 | 8_3:+65494212 | Msa1302840:CDS |
| CCGATCAGAGTAAAATGTGA+GGG | 0.589970 | 8_3:-65491214 | None:intergenic |
| TGGGAGACCTTAATGCTGAA+GGG | 0.590968 | 8_3:+65495983 | Msa1302840:CDS |
| AAGAATACATGGACATCCAA+TGG | 0.592903 | 8_3:-65493434 | None:intergenic |
| GACAGCTTCGACCAAAGCCG+GGG | 0.593808 | 8_3:-65493294 | None:intergenic |
| TTAACAATTATGCCTGTCCA+TGG | 0.594850 | 8_3:-65493353 | None:intergenic |
| GAACTTCAAGGAACAGAGGA+AGG | 0.596171 | 8_3:+65496026 | Msa1302840:CDS |
| GTCCATGTATTCTTCATGGA+TGG | 0.597803 | 8_3:+65493443 | Msa1302840:CDS |
| CCTTATAAGGAGTTAAAGGA+TGG | 0.598931 | 8_3:+65493059 | Msa1302840:CDS |
| AGAATTTAAACGGCACACTC+AGG | 0.609073 | 8_3:+65493096 | Msa1302840:CDS |
| GGGGAGTACCTTCGGAACAA+AGG | 0.609491 | 8_3:+65493653 | Msa1302840:CDS |
| TTTATAGCTATCCAAAGTCA+AGG | 0.612108 | 8_3:-65496276 | None:intergenic |
| GAAGAGTAAGAGTTGCTCGT+CGG | 0.612194 | 8_3:-65491253 | None:intergenic |
| AAGCAACTTAAGCGCAAGAG+AGG | 0.619700 | 8_3:+65496090 | Msa1302840:CDS |
| TGCAGTATAAGTATAATGAG+AGG | 0.621962 | 8_3:+65493786 | Msa1302840:CDS |
| AAGCCCATGAGGAGGTGCGA+AGG | 0.622847 | 8_3:+65494085 | Msa1302840:CDS |
| AGGTACTAACCGATCAAGAG+AGG | 0.623269 | 8_3:+65494196 | Msa1302840:CDS |
| TATTAGAGTCTAGGAGTATG+CGG | 0.623386 | 8_3:+65494058 | Msa1302840:intron |
| TCTCAACCTGCGGTACAGGT+TGG | 0.626635 | 8_3:-65493319 | None:intergenic |
| CCTTTGAAACTAAACATCAT+GGG | 0.626908 | 8_3:+65493537 | Msa1302840:CDS |
| AAGATGATTATAATTGTGGA+GGG | 0.627167 | 8_3:+65493624 | Msa1302840:CDS |
| CATGCAACCGGAGTAAGCAA+AGG | 0.637786 | 8_3:+65493176 | Msa1302840:CDS |
| GGGTTAAATGAAATGCTGAA+GGG | 0.639837 | 8_3:+65495928 | Msa1302840:CDS |
| GAATCAAATCCTCATTGACA+AGG | 0.659917 | 8_3:+65495564 | Msa1302840:CDS |
| GTCCATAAGTAGGATGCTGG+AGG | 0.664077 | 8_3:+65493814 | Msa1302840:CDS |
| TCCGATCAGAGTAAAATGTG+AGG | 0.667395 | 8_3:-65491215 | None:intergenic |
| AAAACTTTGCCAGAGCGAGG+TGG | 0.669720 | 8_3:-65493232 | None:intergenic |
| ACAGCTTCGACCAAAGCCGG+GGG | 0.670168 | 8_3:-65493293 | None:intergenic |
| CGATCAGAGTAAAATGTGAG+GGG | 0.672106 | 8_3:-65491213 | None:intergenic |
| CAGAGATCTAAATAAGCGTG+AGG | 0.673270 | 8_3:+65494176 | Msa1302840:CDS |
| CAGACATAATTCTCAACCTG+CGG | 0.676717 | 8_3:-65493329 | None:intergenic |
| TAATTGTGGAGGGCCAATCG+GGG | 0.679230 | 8_3:+65493634 | Msa1302840:CDS |
| GCGGCGTAAAGCCCATGAGG+AGG | 0.682401 | 8_3:+65494077 | Msa1302840:CDS |
| TATGGAACTTCAAGGAACAG+AGG | 0.683112 | 8_3:+65496022 | Msa1302840:CDS |
| TGTCCTTCTAGAAAGACTCG+AGG | 0.692197 | 8_3:+65495121 | Msa1302840:intron |
| TATGCGGCGTAAAGCCCATG+AGG | 0.709522 | 8_3:+65494074 | Msa1302840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATAATAATAGAACAA+AGG | - | chr8_3:65492814-65492833 | None:intergenic | 10.0% |
| !!! | TTTTTAATCCAAAAAAATAA+AGG | - | chr8_3:65494953-65494972 | None:intergenic | 10.0% |
| !! | GTAATAATAAAACTAATATT+GGG | + | chr8_3:65495950-65495969 | Msa1302840:CDS | 10.0% |
| !!! | ATTATTCTTTAACTTTACTA+GGG | - | chr8_3:65491278-65491297 | None:intergenic | 15.0% |
| !! | TTATGTTAATTAAGCAATTA+GGG | + | chr8_3:65491793-65491812 | Msa1302840:intron | 15.0% |
| !!! | TTTTCATTTTATTTTATGTC+AGG | + | chr8_3:65491911-65491930 | Msa1302840:intron | 15.0% |
| !!! | TTTCATTTTATTTTATGTCA+GGG | + | chr8_3:65491912-65491931 | Msa1302840:intron | 15.0% |
| !!! | TTATTTTATTATTAGAGTCT+AGG | + | chr8_3:65494049-65494068 | Msa1302840:intron | 15.0% |
| !!! | TTTTTACAAATATATGGTTT+TGG | + | chr8_3:65494561-65494580 | Msa1302840:intron | 15.0% |
| !! | ATGCATATATAAAATAAGAT+GGG | + | chr8_3:65494717-65494736 | Msa1302840:intron | 15.0% |
| !! | ATAAATTCTATTCATTAGAT+TGG | - | chr8_3:65494787-65494806 | None:intergenic | 15.0% |
| !! | TCTAATGAATAGAATTTATT+TGG | + | chr8_3:65494788-65494807 | Msa1302840:intron | 15.0% |
| !!! | AAAATCATCCTTTATTTTTT+TGG | + | chr8_3:65494942-65494961 | Msa1302840:intron | 15.0% |
| !! | GGTAATAATAAAACTAATAT+TGG | + | chr8_3:65495949-65495968 | Msa1302840:CDS | 15.0% |
| !!! | CATTATTCTTTAACTTTACT+AGG | - | chr8_3:65491279-65491298 | None:intergenic | 20.0% |
| !!! | TGATATACAAAGGTATTTAT+AGG | - | chr8_3:65491449-65491468 | None:intergenic | 20.0% |
| !!! | ATTTTCCTAATTTAGGATTT+AGG | + | chr8_3:65491686-65491705 | Msa1302840:intron | 20.0% |
| !! | TGTTAATTAGTAATTAGTGA+GGG | + | chr8_3:65491770-65491789 | Msa1302840:intron | 20.0% |
| !! | GTTATGTTAATTAAGCAATT+AGG | + | chr8_3:65491792-65491811 | Msa1302840:intron | 20.0% |
| !!! | TTCATTTTATTTTATGTCAG+GGG | + | chr8_3:65491913-65491932 | Msa1302840:intron | 20.0% |
| !! | TAGGTTAAAATAACTAAAGT+TGG | - | chr8_3:65492639-65492658 | None:intergenic | 20.0% |
| !!! | TATTTTTGTTTGGTAGTAAA+GGG | - | chr8_3:65492764-65492783 | None:intergenic | 20.0% |
| !!! | ATATTTTTGTTTGGTAGTAA+AGG | - | chr8_3:65492765-65492784 | None:intergenic | 20.0% |
| !!! | AATTTTTGAATAACTCAGAT+GGG | - | chr8_3:65492788-65492807 | None:intergenic | 20.0% |
| !!! | AAATTTTTGAATAACTCAGA+TGG | - | chr8_3:65492789-65492808 | None:intergenic | 20.0% |
| !! | TGAAAGAGAAAATAGAAAAT+CGG | + | chr8_3:65493715-65493734 | Msa1302840:CDS | 20.0% |
| !! | ATTTGTAATGTCAATTTCAT+TGG | - | chr8_3:65493750-65493769 | None:intergenic | 20.0% |
| !!! | TTTTAAATGTTTTTTGTTGC+TGG | + | chr8_3:65494280-65494299 | Msa1302840:intron | 20.0% |
| !! | TGAAATATCAATGTATACTT+TGG | + | chr8_3:65494525-65494544 | Msa1302840:intron | 20.0% |
| !! | CATGCATATATAAAATAAGA+TGG | + | chr8_3:65494716-65494735 | Msa1302840:intron | 20.0% |
| !! | TGCATATATAAAATAAGATG+GGG | + | chr8_3:65494718-65494737 | Msa1302840:intron | 20.0% |
| !! | TCTAATGTTCTTGTAATATT+AGG | + | chr8_3:65494824-65494843 | Msa1302840:intron | 20.0% |
| !! | TGAAGCTATTAAGAAAAAAA+TGG | + | chr8_3:65495492-65495511 | Msa1302840:CDS | 20.0% |
| !!! | AATTCTTATTTCCTAAAGAA+AGG | - | chr8_3:65495821-65495840 | None:intergenic | 20.0% |
| !!! | TGTCTAATTTCTATTGTTTT+AGG | + | chr8_3:65495906-65495925 | Msa1302840:intron | 20.0% |
| !!! | GTCTAATTTCTATTGTTTTA+GGG | + | chr8_3:65495907-65495926 | Msa1302840:intron | 20.0% |
| !!! | TCTAATTTCTATTGTTTTAG+GGG | + | chr8_3:65495908-65495927 | Msa1302840:intron | 20.0% |
| ! | ATTAGTAGTACTACTATCTA+AGG | - | chr8_3:65491323-65491342 | None:intergenic | 25.0% |
| ! | AGTACTACTAATTGTATCAT+AGG | + | chr8_3:65491331-65491350 | Msa1302840:intron | 25.0% |
| ! | GAAGAGTTTATGATATACAA+AGG | - | chr8_3:65491459-65491478 | None:intergenic | 25.0% |
| ! | AATGACCTAAATCCTAAATT+AGG | - | chr8_3:65491694-65491713 | None:intergenic | 25.0% |
| ! | CTGTTAATTAGTAATTAGTG+AGG | + | chr8_3:65491769-65491788 | Msa1302840:intron | 25.0% |
| ! | ATACAAATTCAGAACATACA+AGG | - | chr8_3:65492388-65492407 | None:intergenic | 25.0% |
| ! | TACAGTTGCATATAATTGAA+AGG | - | chr8_3:65492840-65492859 | None:intergenic | 25.0% |
| ! | AAGTTGCATATAATTTGAAG+AGG | - | chr8_3:65492931-65492950 | None:intergenic | 25.0% |
| ! | CACAAAGTGAAGAATTTAAA+CGG | + | chr8_3:65493086-65493105 | Msa1302840:CDS | 25.0% |
| ! | GAAGAAAGAGTTCAAATATA+AGG | + | chr8_3:65493142-65493161 | Msa1302840:CDS | 25.0% |
| ! | AAGATGATTATAATTGTGGA+GGG | + | chr8_3:65493624-65493643 | Msa1302840:CDS | 25.0% |
| !! | TTTCTATTTTCTCTTTCAGA+TGG | - | chr8_3:65493713-65493732 | None:intergenic | 25.0% |
| !!! | TTTTGCCTTATTGTATGTAA+AGG | + | chr8_3:65493897-65493916 | Msa1302840:intron | 25.0% |
| ! | ATGAATTGGATGAAAAAATG+CGG | + | chr8_3:65494136-65494155 | Msa1302840:CDS | 25.0% |
| !!! | TACAAAAAAAGCACTTTGTT+AGG | - | chr8_3:65494405-65494424 | None:intergenic | 25.0% |
| ! | AAAAGTTGGATTCACTTAAA+GGG | - | chr8_3:65494439-65494458 | None:intergenic | 25.0% |
| ! | TAAAAGTTGGATTCACTTAA+AGG | - | chr8_3:65494440-65494459 | None:intergenic | 25.0% |
| !! | TAAGTGAATCCAACTTTTAT+TGG | + | chr8_3:65494441-65494460 | Msa1302840:intron | 25.0% |
| !! | TCACAATAATCAAAAGCTTT+TGG | - | chr8_3:65494505-65494524 | None:intergenic | 25.0% |
| !! | TAGAAAAGCATAAATGATCA+AGG | + | chr8_3:65494677-65494696 | Msa1302840:intron | 25.0% |
| ! | GAAGTAATATTTGAATCTTG+AGG | - | chr8_3:65495099-65495118 | None:intergenic | 25.0% |
| ! | TATAAACGAGAGTAAATAGA+GGG | - | chr8_3:65495230-65495249 | None:intergenic | 25.0% |
| ! | TTATAAACGAGAGTAAATAG+AGG | - | chr8_3:65495231-65495250 | None:intergenic | 25.0% |
| ! | TGCCAAACAAAAATTAGAAA+TGG | + | chr8_3:65495411-65495430 | Msa1302840:CDS | 25.0% |
| !! | CTCCATTTCTAATTTTTGTT+TGG | - | chr8_3:65495416-65495435 | None:intergenic | 25.0% |
| ! | AAAATTAGAAATGGAGATTG+AGG | + | chr8_3:65495420-65495439 | Msa1302840:CDS | 25.0% |
| ! | ACAAGAAGATAAAGGTTAAA+AGG | - | chr8_3:65495717-65495736 | None:intergenic | 25.0% |
| ! | TCAAGAATACAAGAAGATAA+AGG | - | chr8_3:65495725-65495744 | None:intergenic | 25.0% |
| ! | AATTAGACAGAGAAAAATGA+GGG | - | chr8_3:65495895-65495914 | None:intergenic | 25.0% |
| ! | AAATTAGACAGAGAAAAATG+AGG | - | chr8_3:65495896-65495915 | None:intergenic | 25.0% |
| ! | AGAAGTTATTACTTATATCG+TGG | + | chr8_3:65496059-65496078 | Msa1302840:CDS | 25.0% |
| !!! | AATTTCTGAGATTACAATTG+TGG | + | chr8_3:65496135-65496154 | Msa1302840:intron | 25.0% |
| ! | AAAAGTAGGATCAATTTCAT+GGG | + | chr8_3:65496239-65496258 | Msa1302840:three_prime_UTR | 25.0% |
| ! | AGTTTGAACTAATGATGAAA+CGG | + | chr8_3:65496385-65496404 | Msa1302840:three_prime_UTR | 25.0% |
| ! | AGAGAGAGATTTTTACTTTG+AGG | - | chr8_3:65491519-65491538 | None:intergenic | 30.0% |
| ACAAACGTATCACATAATAC+AGG | - | chr8_3:65491661-65491680 | None:intergenic | 30.0% | |
| !!! | GTTGCTGATTTTCCTAATTT+AGG | + | chr8_3:65491679-65491698 | Msa1302840:intron | 30.0% |
| AAAAATGCAGAGCTGATAAT+GGG | - | chr8_3:65492014-65492033 | None:intergenic | 30.0% | |
| ! | CATTTTTGTGATAGGAACTA+GGG | + | chr8_3:65492027-65492046 | Msa1302840:intron | 30.0% |
| ! | ATAGGAACTAGGGTATTATA+AGG | + | chr8_3:65492037-65492056 | Msa1302840:intron | 30.0% |
| ! | AATAAAGACTGGTTGAAACT+AGG | - | chr8_3:65492089-65492108 | None:intergenic | 30.0% |
| ! | TCAACCAGTCTTTATTTCTT+TGG | + | chr8_3:65492093-65492112 | Msa1302840:intron | 30.0% |
| ! | CAACCAGTCTTTATTTCTTT+GGG | + | chr8_3:65492094-65492113 | Msa1302840:intron | 30.0% |
| ! | AACCAGTCTTTATTTCTTTG+GGG | + | chr8_3:65492095-65492114 | Msa1302840:intron | 30.0% |
| !!! | TTATGCAGTTTGTTTTGCTT+TGG | + | chr8_3:65492439-65492458 | Msa1302840:intron | 30.0% |
| !!! | TATGCAGTTTGTTTTGCTTT+GGG | + | chr8_3:65492440-65492459 | Msa1302840:intron | 30.0% |
| GAGATATACATGATGCAATT+AGG | - | chr8_3:65492484-65492503 | None:intergenic | 30.0% | |
| CAACATTATAGTGAGATAGA+TGG | - | chr8_3:65492513-65492532 | None:intergenic | 30.0% | |
| CTTCTATATACCTGTGTATT+TGG | + | chr8_3:65492579-65492598 | Msa1302840:intron | 30.0% | |
| CACTTTCACAGAATATGAAT+AGG | - | chr8_3:65492658-65492677 | None:intergenic | 30.0% | |
| !! | TCAGATGGGATATTTTTGTT+TGG | - | chr8_3:65492774-65492793 | None:intergenic | 30.0% |
| ATACTCTGACAAACCTTATA+AGG | + | chr8_3:65493046-65493065 | Msa1302840:CDS | 30.0% | |
| CAAACCTTATAAGGAGTTAA+AGG | + | chr8_3:65493055-65493074 | Msa1302840:CDS | 30.0% | |
| !!! | TCTTTTTTCCAGCACAATAT+GGG | - | chr8_3:65493124-65493143 | None:intergenic | 30.0% |
| !!! | TTCTTTTTTCCAGCACAATA+TGG | - | chr8_3:65493125-65493144 | None:intergenic | 30.0% |
| !! | TCCTTTGAAACTAAACATCA+TGG | + | chr8_3:65493536-65493555 | Msa1302840:CDS | 30.0% |
| !! | CCTTTGAAACTAAACATCAT+GGG | + | chr8_3:65493537-65493556 | Msa1302840:CDS | 30.0% |
| CGTGAAGATGATTATAATTG+TGG | + | chr8_3:65493620-65493639 | Msa1302840:CDS | 30.0% | |
| GAAGATGATTATAATTGTGG+AGG | + | chr8_3:65493623-65493642 | Msa1302840:CDS | 30.0% | |
| ! | TAATGTCAATTTCATTGGCT+AGG | - | chr8_3:65493745-65493764 | None:intergenic | 30.0% |
| ! | ACTTATACTGCATTTTGTAG+AGG | - | chr8_3:65493778-65493797 | None:intergenic | 30.0% |
| TGCAGTATAAGTATAATGAG+AGG | + | chr8_3:65493786-65493805 | Msa1302840:CDS | 30.0% | |
| GAGTAGAAAAAAACTTGCAT+AGG | + | chr8_3:65493981-65494000 | Msa1302840:intron | 30.0% | |
| !! | CTAATCTTTTAGAAGGACAA+TGG | - | chr8_3:65494330-65494349 | None:intergenic | 30.0% |
| ACGAAATTTCGACATAAATG+AGG | - | chr8_3:65494596-65494615 | None:intergenic | 30.0% | |
| TCGTATCCAAACACAAAAAA+TGG | + | chr8_3:65494612-65494631 | Msa1302840:intron | 30.0% | |
| TATCCAAACACAAAAAATGG+AGG | + | chr8_3:65494615-65494634 | Msa1302840:intron | 30.0% | |
| !!! | TTTCCTCCATTTTTTGTGTT+TGG | - | chr8_3:65494621-65494640 | None:intergenic | 30.0% |
| AAACACAAAAAATGGAGGAA+AGG | + | chr8_3:65494620-65494639 | Msa1302840:intron | 30.0% | |
| ! | TATGCTTTTCTACTTTGCTA+AGG | - | chr8_3:65494669-65494688 | None:intergenic | 30.0% |
| TATATAAAATAAGATGGGGC+AGG | + | chr8_3:65494722-65494741 | Msa1302840:intron | 30.0% | |
| TGGGATGAAAAAAAACACAT+CGG | - | chr8_3:65495011-65495030 | None:intergenic | 30.0% | |
| !!! | CTGATGATTTTAAAGTATCG+AGG | - | chr8_3:65495061-65495080 | None:intergenic | 30.0% |
| ! | CAATTGAAGGATCTTGTTTA+AGG | - | chr8_3:65495377-65495396 | None:intergenic | 30.0% |
| CTTAAACAAGATCCTTCAAT+TGG | + | chr8_3:65495375-65495394 | Msa1302840:CDS | 30.0% | |
| TTGCAAGTTATGAAACATCT+TGG | + | chr8_3:65495457-65495476 | Msa1302840:CDS | 30.0% | |
| TACTGAATTGGAAGAAAGTT+TGG | + | chr8_3:65495525-65495544 | Msa1302840:CDS | 30.0% | |
| !! | AATCTATGCAACTTGTTAGT+TGG | - | chr8_3:65495754-65495773 | None:intergenic | 30.0% |
| ATTAGACAGAGAAAAATGAG+GGG | - | chr8_3:65495894-65495913 | None:intergenic | 30.0% | |
| TAATATTGGGACGAAAAGAA+TGG | + | chr8_3:65495963-65495982 | Msa1302840:CDS | 30.0% | |
| AATATTGGGACGAAAAGAAT+GGG | + | chr8_3:65495964-65495983 | Msa1302840:CDS | 30.0% | |
| GAAAAGTAGGATCAATTTCA+TGG | + | chr8_3:65496238-65496257 | Msa1302840:three_prime_UTR | 30.0% | |
| TTTATAGCTATCCAAAGTCA+AGG | - | chr8_3:65496279-65496298 | None:intergenic | 30.0% | |
| ! | TAAGTAATAGGACATTTTCG+TGG | + | chr8_3:65496306-65496325 | Msa1302840:three_prime_UTR | 30.0% |
| GTTTCATCATTAGTTCAAAC+TGG | - | chr8_3:65496386-65496405 | None:intergenic | 30.0% | |
| GAAAAGAGAGAACTATATGC+AGG | - | chr8_3:65491169-65491188 | None:intergenic | 35.0% | |
| CAAGTTCAGGTCATAATTCT+GGG | + | chr8_3:65491412-65491431 | Msa1302840:intron | 35.0% | |
| !! | GAGAGATTTTTACTTTGAGG+TGG | - | chr8_3:65491516-65491535 | None:intergenic | 35.0% |
| ACAGGCAATTCTACAATAGA+AGG | - | chr8_3:65491643-65491662 | None:intergenic | 35.0% | |
| AAATAAATGCTGCATTGTGC+AGG | + | chr8_3:65491847-65491866 | Msa1302840:intron | 35.0% | |
| TGTCAGGGGTTATGTTAATT+TGG | + | chr8_3:65491927-65491946 | Msa1302840:intron | 35.0% | |
| GCATTTAAACTTTCATGCGA+AGG | - | chr8_3:65491976-65491995 | None:intergenic | 35.0% | |
| CAAAAATGCAGAGCTGATAA+TGG | - | chr8_3:65492015-65492034 | None:intergenic | 35.0% | |
| ! | GCATTTTTGTGATAGGAACT+AGG | + | chr8_3:65492026-65492045 | Msa1302840:intron | 35.0% |
| !!! | ATGCAGTTTGTTTTGCTTTG+GGG | + | chr8_3:65492441-65492460 | Msa1302840:intron | 35.0% |
| AAGAAGCAAACCAAATACAC+AGG | - | chr8_3:65492592-65492611 | None:intergenic | 35.0% | |
| !!! | TGTGAAAGTGTCCTGTTTTA+GGG | + | chr8_3:65492668-65492687 | Msa1302840:intron | 35.0% |
| !! | TTGTGGATTGGTGTTATAGA+TGG | + | chr8_3:65492692-65492711 | Msa1302840:intron | 35.0% |
| !! | TGTGGATTGGTGTTATAGAT+GGG | + | chr8_3:65492693-65492712 | Msa1302840:intron | 35.0% |
| !! | ATTGGTGTTATAGATGGGAA+TGG | + | chr8_3:65492698-65492717 | Msa1302840:intron | 35.0% |
| !! | TTGGTGTTATAGATGGGAAT+GGG | + | chr8_3:65492699-65492718 | Msa1302840:intron | 35.0% |
| !! | TTTTGTTTGGTAGTAAAGGG+TGG | - | chr8_3:65492761-65492780 | None:intergenic | 35.0% |
| AATTGTATGCAGAGCTTCAA+TGG | + | chr8_3:65492974-65492993 | Msa1302840:intron | 35.0% | |
| CCATCCTTTAACTCCTTATA+AGG | - | chr8_3:65493062-65493081 | None:intergenic | 35.0% | |
| CCTTATAAGGAGTTAAAGGA+TGG | + | chr8_3:65493059-65493078 | Msa1302840:CDS | 35.0% | |
| AAACAGAAACGCCAAACAAA+AGG | + | chr8_3:65493205-65493224 | Msa1302840:CDS | 35.0% | |
| TTTGGTCTGCTTCATTTACT+AGG | - | chr8_3:65493268-65493287 | None:intergenic | 35.0% | |
| TTAACAATTATGCCTGTCCA+TGG | - | chr8_3:65493356-65493375 | None:intergenic | 35.0% | |
| AAGAGCAACCTTAATGATTC+TGG | + | chr8_3:65493380-65493399 | Msa1302840:CDS | 35.0% | |
| ACCTTAATGATTCTGGATAC+TGG | + | chr8_3:65493387-65493406 | Msa1302840:CDS | 35.0% | |
| ATTTGCAAAGTACAGACCAT+TGG | + | chr8_3:65493418-65493437 | Msa1302840:CDS | 35.0% | |
| AAGAATACATGGACATCCAA+TGG | - | chr8_3:65493437-65493456 | None:intergenic | 35.0% | |
| TAGTAGACTTCATCAATGAC+TGG | + | chr8_3:65493480-65493499 | Msa1302840:CDS | 35.0% | |
| ! | CCCATGATGTTTAGTTTCAA+AGG | - | chr8_3:65493540-65493559 | None:intergenic | 35.0% |
| AACTAAACATCATGGGAAGA+AGG | + | chr8_3:65493544-65493563 | Msa1302840:CDS | 35.0% | |
| GAAGAAGGAATGGAATTCAA+TGG | + | chr8_3:65493559-65493578 | Msa1302840:CDS | 35.0% | |
| CAGTTCAGACATTTATGGAT+GGG | + | chr8_3:65493592-65493611 | Msa1302840:CDS | 35.0% | |
| ! | CTTCACAATGCTTTTGTTGA+AGG | + | chr8_3:65493848-65493867 | Msa1302840:CDS | 35.0% |
| CACAGCCTTTACATACAATA+AGG | - | chr8_3:65493905-65493924 | None:intergenic | 35.0% | |
| ! | TATTAGAGTCTAGGAGTATG+CGG | + | chr8_3:65494058-65494077 | Msa1302840:intron | 35.0% |
| GGAAAAGTTGCGTAATGAAT+TGG | + | chr8_3:65494122-65494141 | Msa1302840:CDS | 35.0% | |
| ! | GACAGGTCTAATCTTTTAGA+AGG | - | chr8_3:65494337-65494356 | None:intergenic | 35.0% |
| TTCACTTAAAGGGAGTCAAT+AGG | - | chr8_3:65494429-65494448 | None:intergenic | 35.0% | |
| GGGATGAAAAAAAACACATC+GGG | - | chr8_3:65495010-65495029 | None:intergenic | 35.0% | |
| GCAAGTAGAGATTAGAAAGT+GGG | - | chr8_3:65495030-65495049 | None:intergenic | 35.0% | |
| AGCAAGTAGAGATTAGAAAG+TGG | - | chr8_3:65495031-65495050 | None:intergenic | 35.0% | |
| ! | TCTTTTTCTCTCTGGTAGTT+TGG | - | chr8_3:65495349-65495368 | None:intergenic | 35.0% |
| !!! | CTAGTTGCTTTTCCAATTGA+AGG | - | chr8_3:65495390-65495409 | None:intergenic | 35.0% |
| ATGGAGATTGAGGAACTAAA+AGG | + | chr8_3:65495430-65495449 | Msa1302840:CDS | 35.0% | |
| TGGAGATTGAGGAACTAAAA+GGG | + | chr8_3:65495431-65495450 | Msa1302840:CDS | 35.0% | |
| !! | GGAAGAAATGAGTACTGAAT+TGG | + | chr8_3:65495513-65495532 | Msa1302840:CDS | 35.0% |
| TGAATTGGAAGAAAGTTTGG+AGG | + | chr8_3:65495528-65495547 | Msa1302840:CDS | 35.0% | |
| GAATCAAATCCTCATTGACA+AGG | + | chr8_3:65495564-65495583 | Msa1302840:CDS | 35.0% | |
| GATCATCTCTACCTTTCTTT+AGG | + | chr8_3:65495807-65495826 | Msa1302840:intron | 35.0% | |
| GTTCTGCTGTGAATATATTG+TGG | + | chr8_3:65495853-65495872 | Msa1302840:intron | 35.0% | |
| TTAGACAGAGAAAAATGAGG+GGG | - | chr8_3:65495893-65495912 | None:intergenic | 35.0% | |
| GGGTTAAATGAAATGCTGAA+GGG | + | chr8_3:65495928-65495947 | Msa1302840:CDS | 35.0% | |
| ATTTGAGCTATGGAACTTCA+AGG | + | chr8_3:65496014-65496033 | Msa1302840:CDS | 35.0% | |
| ! | TTCTGAGCTAGTTTATTTGC+AGG | + | chr8_3:65496195-65496214 | Msa1302840:intron | 35.0% |
| GTGGACTTCATTGTTTATTG+TGG | + | chr8_3:65496325-65496344 | Msa1302840:three_prime_UTR | 35.0% | |
| ACTAATGATGAAACGGTTAC+TGG | + | chr8_3:65496392-65496411 | Msa1302840:three_prime_UTR | 35.0% | |
| AGTAAAATGTGAGGGGATGT+GGG | - | chr8_3:65491209-65491228 | None:intergenic | 40.0% | |
| CGATCAGAGTAAAATGTGAG+GGG | - | chr8_3:65491216-65491235 | None:intergenic | 40.0% | |
| CCGATCAGAGTAAAATGTGA+GGG | - | chr8_3:65491217-65491236 | None:intergenic | 40.0% | |
| ! | CCCTCACATTTTACTCTGAT+CGG | + | chr8_3:65491214-65491233 | Msa1302840:five_prime_UTR | 40.0% |
| TCCGATCAGAGTAAAATGTG+AGG | - | chr8_3:65491218-65491237 | None:intergenic | 40.0% | |
| CTTAGTATTCCACCAAGTTC+AGG | + | chr8_3:65491399-65491418 | Msa1302840:intron | 40.0% | |
| GAATTATGACCTGAACTTGG+TGG | - | chr8_3:65491411-65491430 | None:intergenic | 40.0% | |
| CCAGAATTATGACCTGAACT+TGG | - | chr8_3:65491414-65491433 | None:intergenic | 40.0% | |
| CCAAGTTCAGGTCATAATTC+TGG | + | chr8_3:65491411-65491430 | Msa1302840:intron | 40.0% | |
| TAAGCAATTAGGGCTAAGAG+TGG | + | chr8_3:65491803-65491822 | Msa1302840:intron | 40.0% | |
| ! | CAGCTCTGCATTTTTGTGAT+AGG | + | chr8_3:65492019-65492038 | Msa1302840:intron | 40.0% |
| TGCCCCAAAGAAATAAAGAC+TGG | - | chr8_3:65492100-65492119 | None:intergenic | 40.0% | |
| TGAAACACTGACATAGACAC+TGG | - | chr8_3:65492238-65492257 | None:intergenic | 40.0% | |
| !!! | CTGTGAAAGTGTCCTGTTTT+AGG | + | chr8_3:65492667-65492686 | Msa1302840:intron | 40.0% |
| CAATCCACAAACCCTAAAAC+AGG | - | chr8_3:65492682-65492701 | None:intergenic | 40.0% | |
| !!! | CTGTTTTAGGGTTTGTGGAT+TGG | + | chr8_3:65492680-65492699 | Msa1302840:intron | 40.0% |
| TAGTAAAGGGTGGATGGAAT+AGG | - | chr8_3:65492751-65492770 | None:intergenic | 40.0% | |
| ! | TTTCAGTGAGTCTGAGATTG+AGG | + | chr8_3:65493022-65493041 | Msa1302840:CDS | 40.0% |
| AGAATTTAAACGGCACACTC+AGG | + | chr8_3:65493096-65493115 | Msa1302840:CDS | 40.0% | |
| GATTTGATGCAACATGCAAC+CGG | + | chr8_3:65493164-65493183 | Msa1302840:CDS | 40.0% | |
| GTCTGCTTCATTTACTAGGT+CGG | - | chr8_3:65493264-65493283 | None:intergenic | 40.0% | |
| CAGACATAATTCTCAACCTG+CGG | - | chr8_3:65493332-65493351 | None:intergenic | 40.0% | |
| TTGAGAATTATGTCTGGCCA+TGG | + | chr8_3:65493336-65493355 | Msa1302840:CDS | 40.0% | |
| GCCAGTATCCAGAATCATTA+AGG | - | chr8_3:65493391-65493410 | None:intergenic | 40.0% | |
| ! | TGATTCTGGATACTGGCTAA+AGG | + | chr8_3:65493394-65493413 | Msa1302840:CDS | 40.0% |
| GGATGTCCATGTATTCTTCA+TGG | + | chr8_3:65493439-65493458 | Msa1302840:CDS | 40.0% | |
| GTCCATGTATTCTTCATGGA+TGG | + | chr8_3:65493443-65493462 | Msa1302840:CDS | 40.0% | |
| CACCATCCATGAAGAATACA+TGG | - | chr8_3:65493448-65493467 | None:intergenic | 40.0% | |
| GACTTCATCAATGACTGGAA+TGG | + | chr8_3:65493485-65493504 | Msa1302840:CDS | 40.0% | |
| AACATCATGGGAAGAAGGAA+TGG | + | chr8_3:65493549-65493568 | Msa1302840:CDS | 40.0% | |
| ATGGAATTCAATGGACATGC+AGG | + | chr8_3:65493568-65493587 | Msa1302840:CDS | 40.0% | |
| CCATCCATAAATGTCTGAAC+TGG | - | chr8_3:65493594-65493613 | None:intergenic | 40.0% | |
| CCAGTTCAGACATTTATGGA+TGG | + | chr8_3:65493591-65493610 | Msa1302840:CDS | 40.0% | |
| TATAATTGTGGAGGGCCAAT+CGG | + | chr8_3:65493632-65493651 | Msa1302840:CDS | 40.0% | |
| AGGAAGGCTGAGAACAATTT+CGG | + | chr8_3:65493673-65493692 | Msa1302840:CDS | 40.0% | |
| AGAGGATCATGTCCATAAGT+AGG | + | chr8_3:65493804-65493823 | Msa1302840:CDS | 40.0% | |
| CTTATTTAGATCTCTGCTCC+AGG | - | chr8_3:65494172-65494191 | None:intergenic | 40.0% | |
| CAGAGATCTAAATAAGCGTG+AGG | + | chr8_3:65494176-65494195 | Msa1302840:CDS | 40.0% | |
| ATTAGACCTGTCTTTGTCGA+TGG | + | chr8_3:65494345-65494364 | Msa1302840:intron | 40.0% | |
| GGTAGAAGGCCAATAAAAGT+TGG | - | chr8_3:65494453-65494472 | None:intergenic | 40.0% | |
| TCCAATTAGCAGATGGTAGA+AGG | - | chr8_3:65494467-65494486 | None:intergenic | 40.0% | |
| ! | GCTTTTGGCATATAGACTCT+CGG | - | chr8_3:65494490-65494509 | None:intergenic | 40.0% |
| AAGATGGGGCAGGATTTAAT+TGG | + | chr8_3:65494732-65494751 | Msa1302840:intron | 40.0% | |
| !!! | CGGGCAGATGTGATTTTTTA+TGG | - | chr8_3:65494991-65495010 | None:intergenic | 40.0% |
| ATTCCTCGAGTCTTTCTAGA+AGG | - | chr8_3:65495127-65495146 | None:intergenic | 40.0% | |
| GAGGAATGAGTTACTCTTGT+TGG | + | chr8_3:65495140-65495159 | Msa1302840:CDS | 40.0% | |
| !! | GTTACTCTTGTTGGCTTCAA+AGG | + | chr8_3:65495149-65495168 | Msa1302840:CDS | 40.0% |
| TAGCTGATGAGAATGTCTTC+AGG | + | chr8_3:65495181-65495200 | Msa1302840:CDS | 40.0% | |
| CAGGCTTATTGAAGAGCAAA+AGG | + | chr8_3:65495200-65495219 | Msa1302840:CDS | 40.0% | |
| CTACCAGAGAGAAAAAGAAG+AGG | + | chr8_3:65495351-65495370 | Msa1302840:intron | 40.0% | |
| CTTGTAGTTCATCATTGCTC+TGG | - | chr8_3:65495594-65495613 | None:intergenic | 40.0% | |
| GGGGTTAAATGAAATGCTGA+AGG | + | chr8_3:65495927-65495946 | Msa1302840:intron | 40.0% | |
| GGTATGCTGAATTTGAGCTA+TGG | + | chr8_3:65496004-65496023 | Msa1302840:CDS | 40.0% | |
| TATGGAACTTCAAGGAACAG+AGG | + | chr8_3:65496022-65496041 | Msa1302840:CDS | 40.0% | |
| !! | CAATGTCGAGTTGGAAAAGT+AGG | + | chr8_3:65496225-65496244 | Msa1302840:three_prime_UTR | 40.0% |
| ! | TCTTTTCCGTAAGAGAAGCC+CGG | + | chr8_3:65491182-65491201 | Msa1302840:five_prime_UTR | 45.0% |
| GAGTAAAATGTGAGGGGATG+TGG | - | chr8_3:65491210-65491229 | None:intergenic | 45.0% | |
| AAGAGTAAGAGTTGCTCGTC+GGG | - | chr8_3:65491255-65491274 | None:intergenic | 45.0% | |
| GAAGAGTAAGAGTTGCTCGT+CGG | - | chr8_3:65491256-65491275 | None:intergenic | 45.0% | |
| AATGCTGCATTGTGCAGGAT+CGG | + | chr8_3:65491852-65491871 | Msa1302840:intron | 45.0% | |
| !! | ATGCAGAGCTGATAATGGGA+AGG | - | chr8_3:65492010-65492029 | None:intergenic | 45.0% |
| GCACCAACACCTCTTATCAA+AGG | + | chr8_3:65492117-65492136 | Msa1302840:intron | 45.0% | |
| ! | ACGCCTTTGATAAGAGGTGT+TGG | - | chr8_3:65492123-65492142 | None:intergenic | 45.0% |
| CAACACCGACAAACAAGTGT+GGG | - | chr8_3:65492148-65492167 | None:intergenic | 45.0% | |
| !! | TTGTTTGTCGGTGTTGGACA+TGG | + | chr8_3:65492152-65492171 | Msa1302840:intron | 45.0% |
| CATGACATAGACGCATCATG+AGG | - | chr8_3:65492214-65492233 | None:intergenic | 45.0% | |
| !!! | GTGTCCTGTTTTAGGGTTTG+TGG | + | chr8_3:65492675-65492694 | Msa1302840:intron | 45.0% |
| ! | GTTTGGTAGTAAAGGGTGGA+TGG | - | chr8_3:65492757-65492776 | None:intergenic | 45.0% |
| TGCTGAACCTTTGCTTACTC+CGG | - | chr8_3:65493186-65493205 | None:intergenic | 45.0% | |
| !! | GAGGTGGTTTGCCTTTTGTT+TGG | - | chr8_3:65493219-65493238 | None:intergenic | 45.0% |
| TAATTCTCAACCTGCGGTAC+AGG | - | chr8_3:65493326-65493345 | None:intergenic | 45.0% | |
| ! | CGCAGGTTGAGAATTATGTC+TGG | + | chr8_3:65493330-65493349 | Msa1302840:CDS | 45.0% |
| AATTATGTCTGGCCATGGAC+AGG | + | chr8_3:65493341-65493360 | Msa1302840:CDS | 45.0% | |
| CAGGCCAGTTCAGACATTTA+TGG | + | chr8_3:65493587-65493606 | Msa1302840:CDS | 45.0% | |
| ATAATTGTGGAGGGCCAATC+GGG | + | chr8_3:65493633-65493652 | Msa1302840:CDS | 45.0% | |
| AGTACCTTCGGAACAAAGGA+AGG | + | chr8_3:65493657-65493676 | Msa1302840:CDS | 45.0% | |
| CATGTCCATAAGTAGGATGC+TGG | + | chr8_3:65493811-65493830 | Msa1302840:CDS | 45.0% | |
| AAGGCTGTGTGCTTCATGTT+TGG | + | chr8_3:65493916-65493935 | Msa1302840:intron | 45.0% | |
| AAATGCGGAAGCTTGATACC+TGG | + | chr8_3:65494151-65494170 | Msa1302840:CDS | 45.0% | |
| AGGTACTAACCGATCAAGAG+AGG | + | chr8_3:65494196-65494215 | Msa1302840:CDS | 45.0% | |
| CAGTTTCTGCCTCTCTTGAT+CGG | - | chr8_3:65494208-65494227 | None:intergenic | 45.0% | |
| ACTGGAAGAGGACAAGAAGA+AGG | + | chr8_3:65494224-65494243 | Msa1302840:CDS | 45.0% | |
| AGGATACCATCGACAAAGAC+AGG | - | chr8_3:65494354-65494373 | None:intergenic | 45.0% | |
| TGGTATCCTACCAATGTCCT+TGG | + | chr8_3:65494365-65494384 | Msa1302840:intron | 45.0% | |
| TCAAGAGCAACCAAGGACAT+TGG | - | chr8_3:65494378-65494397 | None:intergenic | 45.0% | |
| AGGCAAATCAAGAGCAACCA+AGG | - | chr8_3:65494385-65494404 | None:intergenic | 45.0% | |
| GCCTTCTACCATCTGCTAAT+TGG | + | chr8_3:65494463-65494482 | Msa1302840:intron | 45.0% | |
| ! | TGTCCTTCTAGAAAGACTCG+AGG | + | chr8_3:65495121-65495140 | Msa1302840:intron | 45.0% |
| TCAGCAGAAGACATTCGCAA+TGG | - | chr8_3:65495317-65495336 | None:intergenic | 45.0% | |
| ! | GCGAATGTCTTCTGCTGATT+TGG | + | chr8_3:65495319-65495338 | Msa1302840:intron | 45.0% |
| ! | AGGCCTCTTCTTTTTCTCTC+TGG | - | chr8_3:65495357-65495376 | None:intergenic | 45.0% |
| ATGGGAGACCTTAATGCTGA+AGG | + | chr8_3:65495982-65496001 | Msa1302840:CDS | 45.0% | |
| TGGGAGACCTTAATGCTGAA+GGG | + | chr8_3:65495983-65496002 | Msa1302840:CDS | 45.0% | |
| CAGCATACCCTTCAGCATTA+AGG | - | chr8_3:65495993-65496012 | None:intergenic | 45.0% | |
| GAACTTCAAGGAACAGAGGA+AGG | + | chr8_3:65496026-65496045 | Msa1302840:CDS | 45.0% | |
| AAGCAACTTAAGCGCAAGAG+AGG | + | chr8_3:65496090-65496109 | Msa1302840:CDS | 45.0% | |
| ACTTAAGCGCAAGAGAGGAT+AGG | + | chr8_3:65496095-65496114 | Msa1302840:CDS | 45.0% | |
| GTAGTGCTGTACCTTGACTT+TGG | + | chr8_3:65496265-65496284 | Msa1302840:three_prime_UTR | 45.0% | |
| !!! | TTTTTTTTTTTACAAATATA+TGG | + | chr8_3:65494555-65494574 | Msa1302840:intron | 5.0% |
| !! | ATAAATATATTATAAGTAAT+AGG | + | chr8_3:65496294-65496313 | Msa1302840:three_prime_UTR | 5.0% |
| TAAGAGTTGCTCGTCGGGAA+GGG | - | chr8_3:65491250-65491269 | None:intergenic | 50.0% | |
| TGGGACACGCCTTTGATAAG+AGG | - | chr8_3:65492129-65492148 | None:intergenic | 50.0% | |
| CGTGTCCCACACTTGTTTGT+CGG | + | chr8_3:65492140-65492159 | Msa1302840:intron | 50.0% | |
| CCAACACCGACAAACAAGTG+TGG | - | chr8_3:65492149-65492168 | None:intergenic | 50.0% | |
| CCACACTTGTTTGTCGGTGT+TGG | + | chr8_3:65492146-65492165 | Msa1302840:intron | 50.0% | |
| CATGCAACCGGAGTAAGCAA+AGG | + | chr8_3:65493176-65493195 | Msa1302840:CDS | 50.0% | |
| AAAACTTTGCCAGAGCGAGG+TGG | - | chr8_3:65493235-65493254 | None:intergenic | 50.0% | |
| CCAAAAACTTTGCCAGAGCG+AGG | - | chr8_3:65493238-65493257 | None:intergenic | 50.0% | |
| ! | CCTCGCTCTGGCAAAGTTTT+TGG | + | chr8_3:65493235-65493254 | Msa1302840:CDS | 50.0% |
| TTGACAGCTTCGACCAAAGC+CGG | - | chr8_3:65493299-65493318 | None:intergenic | 50.0% | |
| CTTCATGGATGGTGACACTC+AGG | + | chr8_3:65493454-65493473 | Msa1302840:CDS | 50.0% | |
| TAATTGTGGAGGGCCAATCG+GGG | + | chr8_3:65493634-65493653 | Msa1302840:CDS | 50.0% | |
| TCAGCCTTCCTTTGTTCCGA+AGG | - | chr8_3:65493664-65493683 | None:intergenic | 50.0% | |
| GTCCATAAGTAGGATGCTGG+AGG | + | chr8_3:65493814-65493833 | Msa1302840:CDS | 50.0% | |
| CTCCTCCAGCATCCTACTTA+TGG | - | chr8_3:65493819-65493838 | None:intergenic | 50.0% | |
| GCGAAGGATCTTGGAAGAAC+AGG | + | chr8_3:65494101-65494120 | Msa1302840:CDS | 50.0% | |
| CGATCAAGAGAGGCAGAAAC+TGG | + | chr8_3:65494206-65494225 | Msa1302840:CDS | 50.0% | |
| AGAGAGGCAGAAACTGGAAG+AGG | + | chr8_3:65494212-65494231 | Msa1302840:CDS | 50.0% | |
| GAGCAACCAAGGACATTGGT+AGG | - | chr8_3:65494374-65494393 | None:intergenic | 50.0% | |
| CTCTCGGTCCAATTAGCAGA+TGG | - | chr8_3:65494474-65494493 | None:intergenic | 50.0% | |
| GGTAGAGATGATCTTCACGC+AGG | - | chr8_3:65495800-65495819 | None:intergenic | 50.0% | |
| CGCAAGAGAGGATAGGCAAA+AGG | + | chr8_3:65496102-65496121 | Msa1302840:exon | 50.0% | |
| ! | GGAGCATCTCAATGTCGAGT+TGG | + | chr8_3:65496216-65496235 | Msa1302840:intron | 50.0% |
| AATGTGAGGGGATGTGGGAC+CGG | - | chr8_3:65491204-65491223 | None:intergenic | 55.0% | |
| GTAAGAGTTGCTCGTCGGGA+AGG | - | chr8_3:65491251-65491270 | None:intergenic | 55.0% | |
| CTCAGGTGCCCATATTGTGC+TGG | + | chr8_3:65493113-65493132 | Msa1302840:CDS | 55.0% | |
| AAAGGCAAACCACCTCGCTC+TGG | + | chr8_3:65493223-65493242 | Msa1302840:CDS | 55.0% | |
| AGCAGACCAAATACCTCCCC+CGG | + | chr8_3:65493277-65493296 | Msa1302840:CDS | 55.0% | |
| TGACAGCTTCGACCAAAGCC+GGG | - | chr8_3:65493298-65493317 | None:intergenic | 55.0% | |
| TGTCAACCAACCTGTACCGC+AGG | + | chr8_3:65493313-65493332 | Msa1302840:CDS | 55.0% | |
| TCTCAACCTGCGGTACAGGT+TGG | - | chr8_3:65493322-65493341 | None:intergenic | 55.0% | |
| !! | TTCCGAAGGTACTCCCCGAT+TGG | - | chr8_3:65493650-65493669 | None:intergenic | 55.0% |
| !! | GGGGAGTACCTTCGGAACAA+AGG | + | chr8_3:65493653-65493672 | Msa1302840:CDS | 55.0% |
| GGATGCTGGAGGAGAAAGAC+AGG | + | chr8_3:65493825-65493844 | Msa1302840:CDS | 55.0% | |
| TATGCGGCGTAAAGCCCATG+AGG | + | chr8_3:65494074-65494093 | Msa1302840:CDS | 55.0% | |
| GATCCTTCGCACCTCCTCAT+GGG | - | chr8_3:65494091-65494110 | None:intergenic | 55.0% | |
| AGATCCTTCGCACCTCCTCA+TGG | - | chr8_3:65494092-65494111 | None:intergenic | 55.0% | |
| ! | TGAGGAGGTGCGAAGGATCT+TGG | + | chr8_3:65494092-65494111 | Msa1302840:CDS | 55.0% |
| TCTGGCGCTCCTTGTCAATG+AGG | - | chr8_3:65495576-65495595 | None:intergenic | 55.0% | |
| GTGGGACCGGGCTTCTCTTA+CGG | - | chr8_3:65491191-65491210 | None:intergenic | 60.0% | |
| ATGTGAGGGGATGTGGGACC+GGG | - | chr8_3:65491203-65491222 | None:intergenic | 60.0% | |
| !! | CCAAAGCCGGGGGAGGTATT+TGG | - | chr8_3:65493286-65493305 | None:intergenic | 60.0% |
| CCAAATACCTCCCCCGGCTT+TGG | + | chr8_3:65493283-65493302 | Msa1302840:CDS | 60.0% | |
| ACAGCTTCGACCAAAGCCGG+GGG | - | chr8_3:65493296-65493315 | None:intergenic | 60.0% | |
| GACAGCTTCGACCAAAGCCG+GGG | - | chr8_3:65493297-65493316 | None:intergenic | 60.0% | |
| !! | GGCCAATCGGGGAGTACCTT+CGG | + | chr8_3:65493645-65493664 | Msa1302840:CDS | 60.0% |
| ! | AAGCCCATGAGGAGGTGCGA+AGG | + | chr8_3:65494085-65494104 | Msa1302840:CDS | 60.0% |
| TTGCTCGTCGGGAAGGGCAG+CGG | - | chr8_3:65491244-65491263 | None:intergenic | 65.0% | |
| GCGGCGTAAAGCCCATGAGG+AGG | + | chr8_3:65494077-65494096 | Msa1302840:CDS | 65.0% | |
| GCTTCGACCAAAGCCGGGGG+AGG | - | chr8_3:65493293-65493312 | None:intergenic | 70.0% | |
| CTCGTCGGGAAGGGCAGCGG+TGG | - | chr8_3:65491241-65491260 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 65491150 | 65496421 | 65491150 | ID=Msa1302840;Name=Msa1302840 |
| chr8_3 | mRNA | 65491150 | 65496421 | 65491150 | ID=Msa1302840-mRNA-1;Parent=Msa1302840;Name=Msa1302840-mRNA-1;_AED=0.04;_eAED=0.04;_QI=146|1|1|1|0.57|0.37|8|239|538 |
| chr8_3 | exon | 65491150 | 65491271 | 65491150 | ID=Msa1302840-mRNA-1:exon:19891;Parent=Msa1302840-mRNA-1 |
| chr8_3 | exon | 65491506 | 65491522 | 65491506 | ID=Msa1302840-mRNA-1:exon:19892;Parent=Msa1302840-mRNA-1 |
| chr8_3 | exon | 65492986 | 65493869 | 65492986 | ID=Msa1302840-mRNA-1:exon:19893;Parent=Msa1302840-mRNA-1 |
| chr8_3 | exon | 65494064 | 65494245 | 65494064 | ID=Msa1302840-mRNA-1:exon:19894;Parent=Msa1302840-mRNA-1 |
| chr8_3 | exon | 65495132 | 65495221 | 65495132 | ID=Msa1302840-mRNA-1:exon:19895;Parent=Msa1302840-mRNA-1 |
| chr8_3 | exon | 65495358 | 65495636 | 65495358 | ID=Msa1302840-mRNA-1:exon:19896;Parent=Msa1302840-mRNA-1 |
| chr8_3 | exon | 65495928 | 65496153 | 65495928 | ID=Msa1302840-mRNA-1:exon:19897;Parent=Msa1302840-mRNA-1 |
| chr8_3 | exon | 65496220 | 65496421 | 65496220 | ID=Msa1302840-mRNA-1:exon:19898;Parent=Msa1302840-mRNA-1 |
| chr8_3 | five_prime_UTR | 65491150 | 65491271 | 65491150 | ID=Msa1302840-mRNA-1:five_prime_utr;Parent=Msa1302840-mRNA-1 |
| chr8_3 | five_prime_UTR | 65491506 | 65491522 | 65491506 | ID=Msa1302840-mRNA-1:five_prime_utr;Parent=Msa1302840-mRNA-1 |
| chr8_3 | five_prime_UTR | 65492986 | 65492992 | 65492986 | ID=Msa1302840-mRNA-1:five_prime_utr;Parent=Msa1302840-mRNA-1 |
| chr8_3 | CDS | 65492993 | 65493869 | 65492993 | ID=Msa1302840-mRNA-1:cds;Parent=Msa1302840-mRNA-1 |
| chr8_3 | CDS | 65494064 | 65494245 | 65494064 | ID=Msa1302840-mRNA-1:cds;Parent=Msa1302840-mRNA-1 |
| chr8_3 | CDS | 65495132 | 65495221 | 65495132 | ID=Msa1302840-mRNA-1:cds;Parent=Msa1302840-mRNA-1 |
| chr8_3 | CDS | 65495358 | 65495636 | 65495358 | ID=Msa1302840-mRNA-1:cds;Parent=Msa1302840-mRNA-1 |
| chr8_3 | CDS | 65495928 | 65496116 | 65495928 | ID=Msa1302840-mRNA-1:cds;Parent=Msa1302840-mRNA-1 |
| chr8_3 | three_prime_UTR | 65496117 | 65496153 | 65496117 | ID=Msa1302840-mRNA-1:three_prime_utr;Parent=Msa1302840-mRNA-1 |
| chr8_3 | three_prime_UTR | 65496220 | 65496421 | 65496220 | ID=Msa1302840-mRNA-1:three_prime_utr;Parent=Msa1302840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
