Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303230 | XP_013457675.1 | 98.485 | 462 | 7 | 0 | 1 | 462 | 1 | 462 | 0.0 | 934 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303230 | sp|F4IDU4|MBOA1_ARATH | 76.242 | 463 | 106 | 2 | 3 | 462 | 1 | 462 | 0.0 | 720 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303230 | A0A072UQR7 | 98.485 | 462 | 7 | 0 | 1 | 462 | 1 | 462 | 0.0 | 934 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1208170 | Msa1303230 | 0.910887 | 1.132026e-82 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303230 | MtrunA17_Chr4g0057271 | 98.485 | 462 | 7 | 0 | 1 | 462 | 1 | 462 | 0.0 | 934 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303230 | AT1G12640.1 | 76.242 | 463 | 106 | 2 | 3 | 462 | 1 | 462 | 0.0 | 720 |
| Msa1303230 | AT1G63050.1 | 75.162 | 463 | 111 | 2 | 3 | 462 | 4 | 465 | 0.0 | 707 |
Find 135 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCACTTTCTTTCTTGGATT+TGG | 0.199879 | 8_3:-66200593 | Msa1303230:CDS |
| GGTATCATCACTTTCTTTCT+TGG | 0.213299 | 8_3:-66200599 | Msa1303230:CDS |
| TTTCTTGTTCCTATGGTTCT+TGG | 0.214151 | 8_3:-66200656 | Msa1303230:CDS |
| TTCGATCTGGCAGGCCTTCC+AGG | 0.216933 | 8_3:+66197669 | None:intergenic |
| CACAGACCGTTAGTGCTATT+TGG | 0.218362 | 8_3:-66198553 | Msa1303230:CDS |
| CCTATTGTTATCATCCTTCT+TGG | 0.234661 | 8_3:-66197705 | Msa1303230:CDS |
| TTATTCCTGTGTTGGCTTCA+TGG | 0.237906 | 8_3:-66197997 | Msa1303230:intron |
| GGTTCTTGGTTATGCTTCTA+TGG | 0.244748 | 8_3:-66200642 | Msa1303230:CDS |
| AACAGTGCAGTTATTCTCTT+TGG | 0.270236 | 8_3:-66197623 | Msa1303230:three_prime_UTR |
| GATTTGTAGATTTGGAATTT+TGG | 0.278800 | 8_3:-66199430 | Msa1303230:intron |
| TTTCTCTCTTATCTTTCATT+TGG | 0.281170 | 8_3:-66200698 | Msa1303230:CDS |
| CCATTCCCTTAAGTTTCTTT+TGG | 0.281676 | 8_3:-66200775 | Msa1303230:CDS |
| ATTGAGATATAACGAAGTTT+TGG | 0.284592 | 8_3:+66200914 | None:intergenic |
| ACTTGTTTGCATTAATTGTT+TGG | 0.308449 | 8_3:+66197337 | None:intergenic |
| GCACCATATGGTGATGGTTT+TGG | 0.315250 | 8_3:+66199397 | None:intergenic |
| TTGAAATCAAATTAGGATAG+TGG | 0.315943 | 8_3:-66197595 | Msa1303230:three_prime_UTR |
| CATATCATGAATGGTGCTTC+TGG | 0.319810 | 8_3:-66199282 | Msa1303230:CDS |
| TGTTGTGGAAGTCACTTTGC+TGG | 0.320070 | 8_3:-66200232 | Msa1303230:CDS |
| GCTCTGTCCCAACGCGGCTT+TGG | 0.320400 | 8_3:+66199130 | None:intergenic |
| TTCTATTATCATCTCTGGCT+TGG | 0.327718 | 8_3:-66199182 | Msa1303230:CDS |
| CTGGCTTGGGTTTCAGTGGC+TGG | 0.334935 | 8_3:-66199168 | Msa1303230:CDS |
| GTTGGAAATATTATTTCATT+TGG | 0.336497 | 8_3:-66199219 | Msa1303230:CDS |
| TACCAAAGCATGCACCATTT+AGG | 0.337015 | 8_3:+66197230 | None:intergenic |
| AAATGAAGGATTATCTTGAT+TGG | 0.344307 | 8_3:-66200198 | Msa1303230:CDS |
| CAGTCAGCATTGATGATTGC+TGG | 0.350154 | 8_3:-66198195 | Msa1303230:CDS |
| CATGAAACTCTTGCCTCATA+TGG | 0.355168 | 8_3:-66197756 | Msa1303230:CDS |
| AACTTAGTCAGAGGAAAATA+AGG | 0.357630 | 8_3:+66199316 | None:intergenic |
| TCTATTATCATCTCTGGCTT+GGG | 0.358985 | 8_3:-66199181 | Msa1303230:CDS |
| GTTCTAAGTTATTCCTGTGT+TGG | 0.360919 | 8_3:-66198005 | Msa1303230:CDS |
| GATTCCATGGCCGCTTCAAT+TGG | 0.370021 | 8_3:-66200842 | Msa1303230:CDS |
| CTGTCCCAACGCGGCTTTGG+TGG | 0.377191 | 8_3:+66199133 | None:intergenic |
| GAAGCTTCTATTATCATCTC+TGG | 0.389427 | 8_3:-66199187 | Msa1303230:CDS |
| AATTGTTGAGATTCAATTCA+AGG | 0.391370 | 8_3:+66200969 | None:intergenic |
| AGCTCCTTTAGTCTTGGAAA+TGG | 0.391446 | 8_3:-66197510 | Msa1303230:three_prime_UTR |
| CTCTCCACCAAAGCCGCGTT+GGG | 0.392120 | 8_3:-66199137 | Msa1303230:CDS |
| CTGTTAAGCCAGACATATAC+TGG | 0.392279 | 8_3:+66199245 | None:intergenic |
| AGTGATTATTGAAGAAATGT+TGG | 0.392740 | 8_3:-66197407 | Msa1303230:three_prime_UTR |
| CAGATGGCAATTTAATTAAA+CGG | 0.392771 | 8_3:+66200281 | None:intergenic |
| GCGGCGGAGTAGAAGTGTTT+AGG | 0.394399 | 8_3:+66200731 | None:intergenic |
| GTTTCCACGGGGTTCAGCTC+TGG | 0.399134 | 8_3:-66197551 | Msa1303230:three_prime_UTR |
| ATCCTAAATGGTGCATGCTT+TGG | 0.399412 | 8_3:-66197232 | None:intergenic |
| AAAATACACGCTTCCATATG+AGG | 0.415312 | 8_3:+66197743 | None:intergenic |
| GGCTGGATCTTCAGTTTCCA+CGG | 0.419594 | 8_3:-66197564 | Msa1303230:three_prime_UTR |
| GATGGATTGTTGAAAGAAGA+AGG | 0.421814 | 8_3:-66200328 | Msa1303230:CDS |
| TGTAACAGCTCCTTTAGTCT+TGG | 0.425070 | 8_3:-66197516 | Msa1303230:three_prime_UTR |
| GGCTCGTTGTGCTGTGTGGT+TGG | 0.435782 | 8_3:+66200884 | None:intergenic |
| CCAAGAAGGATGATAACAAT+AGG | 0.436962 | 8_3:+66197705 | None:intergenic |
| CTTTAGTCTTGGAAATGGTT+CGG | 0.437912 | 8_3:-66197505 | Msa1303230:three_prime_UTR |
| TTATTTCAGGGGTTGTATCC+TGG | 0.439877 | 8_3:-66198237 | Msa1303230:intron |
| TTGGATGACACAATCTTTGA+AGG | 0.447631 | 8_3:-66201059 | None:intergenic |
| TTGGGTTACCAGTATATGTC+TGG | 0.449963 | 8_3:-66199253 | Msa1303230:CDS |
| GTGATTATTGAAGAAATGTT+GGG | 0.454579 | 8_3:-66197406 | Msa1303230:three_prime_UTR |
| GCTGGATCTTCAGTTTCCAC+GGG | 0.460572 | 8_3:-66197563 | Msa1303230:three_prime_UTR |
| AAACGCCAAAAGAAACTTAA+GGG | 0.461538 | 8_3:+66200770 | None:intergenic |
| TGAAATCAAATTAGGATAGT+GGG | 0.462375 | 8_3:-66197594 | Msa1303230:three_prime_UTR |
| AAAACGCCAAAAGAAACTTA+AGG | 0.462926 | 8_3:+66200769 | None:intergenic |
| GGATAGTGGGAGAGGCTGGC+TGG | 0.465788 | 8_3:-66197581 | Msa1303230:three_prime_UTR |
| CCGAACCTTCATATCATGAA+TGG | 0.466521 | 8_3:-66199291 | Msa1303230:CDS |
| AATGACGTGATTACCCTTAC+CGG | 0.469655 | 8_3:+66201007 | None:intergenic |
| CCATCTGTTATTGAGTATGT+TGG | 0.475781 | 8_3:-66200265 | Msa1303230:CDS |
| ATTACATGAGCGGTGATGCT+TGG | 0.476065 | 8_3:-66200547 | Msa1303230:CDS |
| ATTAGGATAGTGGGAGAGGC+TGG | 0.476278 | 8_3:-66197585 | Msa1303230:three_prime_UTR |
| GCTCGAAGTGTTGCACCATA+TGG | 0.482462 | 8_3:+66199385 | None:intergenic |
| TGCCAGATCGAAAGCTCAAA+AGG | 0.484458 | 8_3:-66197658 | Msa1303230:CDS |
| ATCTCTGGCTTGGGTTTCAG+TGG | 0.486889 | 8_3:-66199172 | Msa1303230:CDS |
| TCAAGTTGAAGCTCCATGGC+TGG | 0.489644 | 8_3:+66200863 | None:intergenic |
| AACACCAATTGAAGCGGCCA+TGG | 0.492799 | 8_3:+66200838 | None:intergenic |
| GCAAGTAACTGAAGAAATCC+TGG | 0.496211 | 8_3:+66198578 | None:intergenic |
| TATGACTGTGATGGCCGGTA+AGG | 0.497527 | 8_3:-66201021 | Msa1303230:five_prime_UTR |
| ACAGCACAACGAGCCAGCCA+TGG | 0.498916 | 8_3:-66200876 | Msa1303230:exon |
| CCATTCATGATATGAAGGTT+CGG | 0.506149 | 8_3:+66199291 | None:intergenic |
| GATTATCTTGATTGGACTGA+AGG | 0.506375 | 8_3:-66200190 | Msa1303230:CDS |
| GGACCAAAACCATCACCATA+TGG | 0.507670 | 8_3:-66199400 | Msa1303230:CDS |
| CACTTCTACTCCGCCGCCGT+TGG | 0.513594 | 8_3:-66200725 | Msa1303230:CDS |
| TCAAATTAGGATAGTGGGAG+AGG | 0.513746 | 8_3:-66197589 | Msa1303230:three_prime_UTR |
| GGAGCTTCAACTTGATTCCA+TGG | 0.514766 | 8_3:-66200855 | Msa1303230:CDS |
| GAAGGTGGAATCGATGCAAC+TGG | 0.519690 | 8_3:-66200521 | Msa1303230:intron |
| AAGCAAAATTAGCGAACACC+AGG | 0.524642 | 8_3:+66198039 | None:intergenic |
| CCTCTCCACCAAAGCCGCGT+TGG | 0.529654 | 8_3:-66199138 | Msa1303230:CDS |
| ACAAAGAATATAATGTATCC+AGG | 0.530643 | 8_3:+66198219 | None:intergenic |
| CGAACCATTTCCAAGACTAA+AGG | 0.533406 | 8_3:+66197506 | None:intergenic |
| GCAGAGAAGGAAGCGGAGAA+CGG | 0.537707 | 8_3:+66200808 | None:intergenic |
| ATCCTGGCTTCTTCCCACTC+TGG | 0.537883 | 8_3:+66198594 | None:intergenic |
| AAGCACCATTCATGATATGA+AGG | 0.537918 | 8_3:+66199286 | None:intergenic |
| ATCCAGAGTGGGAAGAAGCC+AGG | 0.538068 | 8_3:-66198596 | Msa1303230:CDS |
| CTTGGTAAAGTGATCAAGCC+TGG | 0.542234 | 8_3:-66197687 | Msa1303230:CDS |
| ATGATAGGCTTATCCAGAGT+GGG | 0.543235 | 8_3:-66198607 | Msa1303230:CDS |
| ACTTGAATATTCCACACAGC+TGG | 0.544819 | 8_3:+66199055 | None:intergenic |
| GCTTGATCACTTTACCAAGA+AGG | 0.546312 | 8_3:+66197691 | None:intergenic |
| AGCGGTGATGCTTGGAAAGA+AGG | 0.547981 | 8_3:-66200539 | Msa1303230:CDS |
| CTTCGAGCTCTACTTCAAGC+TGG | 0.550167 | 8_3:-66199370 | Msa1303230:CDS |
| TGGTGGCGACGAAGCAGAGA+AGG | 0.551712 | 8_3:+66200795 | None:intergenic |
| CGACGAAGCAGAGAAGGAAG+CGG | 0.551927 | 8_3:+66200801 | None:intergenic |
| TTAGAAACATCGATGTTGAC+GGG | 0.552044 | 8_3:-66197438 | Msa1303230:three_prime_UTR |
| GTTAGAAACATCGATGTTGA+CGG | 0.553082 | 8_3:-66197439 | Msa1303230:three_prime_UTR |
| TTCAAACAGTCATTTACAGA+TGG | 0.556918 | 8_3:-66198094 | Msa1303230:intron |
| AAGGAAGCGGAGAACGGCGA+CGG | 0.558050 | 8_3:+66200814 | None:intergenic |
| AAACTCACAATGGCGAAGCC+AGG | 0.558480 | 8_3:+66199027 | None:intergenic |
| ATGACTGTGATGGCCGGTAA+GGG | 0.562185 | 8_3:-66201020 | Msa1303230:five_prime_UTR |
| GTAAAGTGATCAAGCCTGGA+AGG | 0.564430 | 8_3:-66197683 | Msa1303230:CDS |
| CCAAAAGAAACTTAAGGGAA+TGG | 0.567792 | 8_3:+66200775 | None:intergenic |
| GAAGCATAACCAAGAACCAT+AGG | 0.569556 | 8_3:+66200647 | None:intergenic |
| TGTGCAATTAATTATAACGA+TGG | 0.570026 | 8_3:-66200346 | Msa1303230:CDS |
| GGAATCAAGTTGAAGCTCCA+TGG | 0.572533 | 8_3:+66200859 | None:intergenic |
| GGCTGGCTCGTTGTGCTGTG+TGG | 0.573177 | 8_3:+66200880 | None:intergenic |
| CAAACTATGACTGTGATGGC+CGG | 0.583290 | 8_3:-66201026 | Msa1303230:five_prime_UTR |
| GATGATAACAATAGGTAGAA+CGG | 0.584053 | 8_3:+66197713 | None:intergenic |
| CCAACGCGGCTTTGGTGGAG+AGG | 0.585335 | 8_3:+66199138 | None:intergenic |
| GGAATATTCAAGTCAGCACC+TGG | 0.589501 | 8_3:-66199045 | Msa1303230:CDS |
| CCAACATACTCAATAACAGA+TGG | 0.592112 | 8_3:+66200265 | None:intergenic |
| CACATGCCAAATAGCACTAA+CGG | 0.598601 | 8_3:+66198547 | None:intergenic |
| CTTGATTGGACTGAAGGACA+AGG | 0.599300 | 8_3:-66200184 | Msa1303230:CDS |
| TTGATGATTGCTGGTTCCAG+AGG | 0.599868 | 8_3:-66198186 | Msa1303230:intron |
| GTCATTTACAGATGGCAGCA+AGG | 0.605840 | 8_3:-66198086 | Msa1303230:CDS |
| TTGATTGGACTGAAGGACAA+GGG | 0.609966 | 8_3:-66200183 | Msa1303230:CDS |
| GACGGAAACACCAATTGAAG+CGG | 0.615322 | 8_3:+66200832 | None:intergenic |
| GTAATTTATCGTCAGAGATG+TGG | 0.617829 | 8_3:-66200620 | Msa1303230:CDS |
| AGTGTTGCACCATATGGTGA+TGG | 0.624851 | 8_3:+66199391 | None:intergenic |
| ACAACAAACTATGACTGTGA+TGG | 0.626294 | 8_3:-66201030 | Msa1303230:five_prime_UTR |
| GGTTCGGTAAACTTAGTCAG+AGG | 0.636544 | 8_3:+66199307 | None:intergenic |
| TATGATAGGCTTATCCAGAG+TGG | 0.639089 | 8_3:-66198608 | Msa1303230:CDS |
| GCAAACCATGAAGCCAACAC+AGG | 0.646385 | 8_3:+66197992 | None:intergenic |
| AAAGAAACTTAAGGGAATGG+TGG | 0.647769 | 8_3:+66200778 | None:intergenic |
| TGATTGGACTGAAGGACAAG+GGG | 0.649786 | 8_3:-66200182 | Msa1303230:intron |
| CTGGATCTTCAGTTTCCACG+GGG | 0.658077 | 8_3:-66197562 | Msa1303230:three_prime_UTR |
| TGTCATGTTTATTACATGAG+CGG | 0.662354 | 8_3:-66200557 | Msa1303230:CDS |
| AAAGCTCAAAAGGAAGAGTG+AGG | 0.671201 | 8_3:-66197648 | Msa1303230:exon |
| AAGTGTTTAGGAAGACGACC+AGG | 0.672673 | 8_3:+66200743 | None:intergenic |
| GGTGATGCTTGGAAAGAAGG+TGG | 0.677292 | 8_3:-66200536 | Msa1303230:CDS |
| AATAGCACTAACGGTCTGTG+TGG | 0.678558 | 8_3:+66198556 | None:intergenic |
| TCAGAGGAAAATAAGGCACG+AGG | 0.693182 | 8_3:+66199323 | None:intergenic |
| AGCAAAATTAGCGAACACCA+GGG | 0.693283 | 8_3:+66198040 | None:intergenic |
| TGTCTGGCTTAACAGCACGT+TGG | 0.696548 | 8_3:-66199237 | Msa1303230:CDS |
| CAGTTGTAATTCCAGCTGTG+TGG | 0.697153 | 8_3:-66199066 | Msa1303230:CDS |
| AAAACCAGAGCTGAACCCCG+TGG | 0.727745 | 8_3:+66197547 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATCAGCATAAATTAAATT+GGG | + | chr8_3:66198212-66198231 | None:intergenic | 15.0% |
| !! | TTTATATCGGAAAAATAAAA+AGG | - | chr8_3:66198389-66198408 | Msa1303230:intron | 15.0% |
| !! | TTATATCGGAAAAATAAAAA+GGG | - | chr8_3:66198390-66198409 | Msa1303230:intron | 15.0% |
| !!! | TTTTTGTATAAACGATTTAT+TGG | - | chr8_3:66199431-66199450 | Msa1303230:intron | 15.0% |
| !!! | ATTTTGACATTTTTATTTCA+GGG | - | chr8_3:66200033-66200052 | Msa1303230:intron | 15.0% |
| !! | ATGTTATGTTAATGTTAATC+TGG | - | chr8_3:66198124-66198143 | Msa1303230:intron | 20.0% |
| !! | CTTATCAGCATAAATTAAAT+TGG | + | chr8_3:66198213-66198232 | None:intergenic | 20.0% |
| !!! | AAGGATAGTCTTTTTTATAT+CGG | - | chr8_3:66198376-66198395 | Msa1303230:intron | 20.0% |
| !! | GTTGGAAATATTATTTCATT+TGG | - | chr8_3:66199063-66199082 | Msa1303230:CDS | 20.0% |
| !!! | GAAGAAAGATTATTTTAACA+TGG | + | chr8_3:66199458-66199477 | None:intergenic | 20.0% |
| !!! | TTTTTGTAGATGTTTATGAT+AGG | - | chr8_3:66199660-66199679 | Msa1303230:intron | 20.0% |
| !!! | CTTTCTATTTCTACTATATT+TGG | - | chr8_3:66199802-66199821 | Msa1303230:intron | 20.0% |
| !!! | ATATGAATTTTTCTTGTCAA+CGG | + | chr8_3:66200009-66200028 | None:intergenic | 20.0% |
| !!! | CATTTTGACATTTTTATTTC+AGG | - | chr8_3:66200032-66200051 | Msa1303230:intron | 20.0% |
| !!! | TTTTGACATTTTTATTTCAG+GGG | - | chr8_3:66200034-66200053 | Msa1303230:intron | 20.0% |
| ! | AATTGTTGAGATTCAATTCA+AGG | + | chr8_3:66197316-66197335 | None:intergenic | 25.0% |
| !! | ATTGAGATATAACGAAGTTT+TGG | + | chr8_3:66197371-66197390 | None:intergenic | 25.0% |
| ! | TTTCTCTCTTATCTTTCATT+TGG | - | chr8_3:66197584-66197603 | Msa1303230:three_prime_UTR | 25.0% |
| !! | TTGAGGGTTTTTGTTAATTA+TGG | - | chr8_3:66197851-66197870 | Msa1303230:intron | 25.0% |
| !!! | ATTGGATTTTGGTGATTTTA+GGG | - | chr8_3:66197880-66197899 | Msa1303230:intron | 25.0% |
| !!! | TTTAATGGTTTTGACATTGA+AGG | - | chr8_3:66197905-66197924 | Msa1303230:intron | 25.0% |
| ! | TGTGCAATTAATTATAACGA+TGG | - | chr8_3:66197936-66197955 | Msa1303230:intron | 25.0% |
| ! | CAGATGGCAATTTAATTAAA+CGG | + | chr8_3:66198004-66198023 | None:intergenic | 25.0% |
| ! | TAATCCTTCATTTCAAAAAC+AGG | + | chr8_3:66198077-66198096 | None:intergenic | 25.0% |
| ! | AAATGAAGGATTATCTTGAT+TGG | - | chr8_3:66198084-66198103 | Msa1303230:CDS | 25.0% |
| !!! | GAAAAATAAAAAGGGCATTT+TGG | - | chr8_3:66198398-66198417 | Msa1303230:intron | 25.0% |
| ! | TTGATTTAGAAACTGATCAT+GGG | + | chr8_3:66198522-66198541 | None:intergenic | 25.0% |
| !! | TTTGATTTAGAAACTGATCA+TGG | + | chr8_3:66198523-66198542 | None:intergenic | 25.0% |
| ! | ATCAGTTTCTAAATCAAACA+TGG | - | chr8_3:66198525-66198544 | Msa1303230:intron | 25.0% |
| ! | TTTATTAGTGTTGTCAAATG+TGG | - | chr8_3:66198621-66198640 | Msa1303230:intron | 25.0% |
| ! | TTGTTAAATAGCAGTTATAG+AGG | + | chr8_3:66198801-66198820 | None:intergenic | 25.0% |
| !!! | GATTTGTAGATTTGGAATTT+TGG | - | chr8_3:66198852-66198871 | Msa1303230:intron | 25.0% |
| ! | GCTAAAAATGTGGATATATT+AGG | - | chr8_3:66199173-66199192 | Msa1303230:CDS | 25.0% |
| ! | TTAAGTTTCATGCGTAAAAT+TGG | + | chr8_3:66199322-66199341 | None:intergenic | 25.0% |
| ! | TTTACGCATGAAACTTAAAT+AGG | - | chr8_3:66199324-66199343 | Msa1303230:CDS | 25.0% |
| ! | TTACGCATGAAACTTAAATA+GGG | - | chr8_3:66199325-66199344 | Msa1303230:CDS | 25.0% |
| ! | AAATAACTAAAGAACCAAAC+AGG | + | chr8_3:66199414-66199433 | None:intergenic | 25.0% |
| ! | ACAAAGAATATAATGTATCC+AGG | + | chr8_3:66200066-66200085 | None:intergenic | 25.0% |
| ! | TAATTCAATATCTATACCTC+TGG | + | chr8_3:66200115-66200134 | None:intergenic | 25.0% |
| !! | AGAGGTATAGATATTGAATT+AGG | - | chr8_3:66200114-66200133 | Msa1303230:intron | 25.0% |
| !!! | GGAGTTTTTGAAATCAAATT+AGG | - | chr8_3:66200680-66200699 | Msa1303230:CDS | 25.0% |
| ! | TTGAAATCAAATTAGGATAG+TGG | - | chr8_3:66200687-66200706 | Msa1303230:CDS | 25.0% |
| ! | TGAAATCAAATTAGGATAGT+GGG | - | chr8_3:66200688-66200707 | Msa1303230:CDS | 25.0% |
| ! | AGTGATTATTGAAGAAATGT+TGG | - | chr8_3:66200875-66200894 | Msa1303230:exon | 25.0% |
| ! | GTGATTATTGAAGAAATGTT+GGG | - | chr8_3:66200876-66200895 | Msa1303230:exon | 25.0% |
| ! | ACTTGTTTGCATTAATTGTT+TGG | + | chr8_3:66200948-66200967 | None:intergenic | 25.0% |
| ! | AGCTATAGACAAAAAAAATC+AGG | - | chr8_3:66200986-66201005 | Msa1303230:five_prime_UTR | 25.0% |
| !! | TTTTCTGTTCTAATCCTAAA+TGG | - | chr8_3:66201038-66201057 | Msa1303230:five_prime_UTR | 25.0% |
| AAACGCCAAAAGAAACTTAA+GGG | + | chr8_3:66197515-66197534 | None:intergenic | 30.0% | |
| AAAACGCCAAAAGAAACTTA+AGG | + | chr8_3:66197516-66197535 | None:intergenic | 30.0% | |
| ATAAGAGAGAAAAACACCAA+CGG | + | chr8_3:66197576-66197595 | None:intergenic | 30.0% | |
| ! | TCTTCATTTTCTTGTTCCTA+TGG | - | chr8_3:66197619-66197638 | Msa1303230:three_prime_UTR | 30.0% |
| ATCACTTTCTTTCTTGGATT+TGG | - | chr8_3:66197689-66197708 | Msa1303230:CDS | 30.0% | |
| TGTCATGTTTATTACATGAG+CGG | - | chr8_3:66197725-66197744 | Msa1303230:CDS | 30.0% | |
| TGTTAATTATGGTGTGTGAT+TGG | - | chr8_3:66197862-66197881 | Msa1303230:intron | 30.0% | |
| !! | GATTGGATTTTGGTGATTTT+AGG | - | chr8_3:66197879-66197898 | Msa1303230:intron | 30.0% |
| !! | TTGGATTTTGGTGATTTTAG+GGG | - | chr8_3:66197881-66197900 | Msa1303230:intron | 30.0% |
| AATTAAATTGGGCATGCATT+CGG | + | chr8_3:66198201-66198220 | None:intergenic | 30.0% | |
| ! | ATGCCCAATTTATCATGTTT+TGG | - | chr8_3:66198266-66198285 | Msa1303230:intron | 30.0% |
| ! | TGCCCAATTTATCATGTTTT+GGG | - | chr8_3:66198267-66198286 | Msa1303230:intron | 30.0% |
| ACCCCAAAACATGATAAATT+GGG | + | chr8_3:66198272-66198291 | None:intergenic | 30.0% | |
| ATTCGTAAAACGTTAAGTAC+CGG | - | chr8_3:66198299-66198318 | Msa1303230:intron | 30.0% | |
| GTGTTATGTTCTATCTTATC+CGG | + | chr8_3:66198321-66198340 | None:intergenic | 30.0% | |
| !! | TGGGACAAAAAAGGTATTAA+GGG | + | chr8_3:66198503-66198522 | None:intergenic | 30.0% |
| !! | ATGGGACAAAAAAGGTATTA+AGG | + | chr8_3:66198504-66198523 | None:intergenic | 30.0% |
| GTACAAAATGTTGTCAAGTA+AGG | + | chr8_3:66198711-66198730 | None:intergenic | 30.0% | |
| ATAGAGGCAAAATATCGTTA+TGG | + | chr8_3:66198785-66198804 | None:intergenic | 30.0% | |
| ! | GTTGTTGTGATTTGTAGATT+TGG | - | chr8_3:66198844-66198863 | Msa1303230:intron | 30.0% |
| !! | ATTTGGAATTTTGGTGCAAA+AGG | - | chr8_3:66198861-66198880 | Msa1303230:intron | 30.0% |
| AACTTAGTCAGAGGAAAATA+AGG | + | chr8_3:66198969-66198988 | None:intergenic | 30.0% | |
| TAAAGAACTGAAACTCACAA+TGG | + | chr8_3:66199268-66199287 | None:intergenic | 30.0% | |
| ! | TTCAAGTTCTGGTAATAGTA+TGG | - | chr8_3:66199364-66199383 | Msa1303230:CDS | 30.0% |
| !!! | GCTAGATTAGTTTTTCATGT+TGG | - | chr8_3:66199386-66199405 | Msa1303230:CDS | 30.0% |
| ! | TTCAGCTATAACATCTGTTT+TGG | - | chr8_3:66199478-66199497 | Msa1303230:intron | 30.0% |
| AAACTATGAAAATCAACTGC+TGG | + | chr8_3:66199533-66199552 | None:intergenic | 30.0% | |
| GATGCAAAATTGAAATGTGA+AGG | - | chr8_3:66199594-66199613 | Msa1303230:intron | 30.0% | |
| GAATGCATTTGTAGTTTCTT+CGG | - | chr8_3:66199867-66199886 | Msa1303230:intron | 30.0% | |
| TTCAAACAGTCATTTACAGA+TGG | - | chr8_3:66200188-66200207 | Msa1303230:CDS | 30.0% | |
| ! | TAATTTTGCTTACACACTTC+TGG | - | chr8_3:66200255-66200274 | Msa1303230:CDS | 30.0% |
| ACACAAATGTCCAATTTGTA+TGG | - | chr8_3:66200421-66200440 | Msa1303230:intron | 30.0% | |
| GTAAATCTGACCATACAAAT+TGG | + | chr8_3:66200434-66200453 | None:intergenic | 30.0% | |
| !!! | TATGGAAGCGTGTATTTTTT+TGG | - | chr8_3:66200544-66200563 | Msa1303230:CDS | 30.0% |
| GATGATAACAATAGGTAGAA+CGG | + | chr8_3:66200572-66200591 | None:intergenic | 30.0% | |
| !! | GTTCGGCAGTTTTATATTTT+TGG | - | chr8_3:66200794-66200813 | Msa1303230:CDS | 30.0% |
| ACAACAAACTATGACTGTGA+TGG | - | chr8_3:66197252-66197271 | Msa1303230:three_prime_UTR | 35.0% | |
| !!! | TAACGAAGTTTTGGAGAAGA+AGG | + | chr8_3:66197362-66197381 | None:intergenic | 35.0% |
| AAAGAAACTTAAGGGAATGG+TGG | + | chr8_3:66197507-66197526 | None:intergenic | 35.0% | |
| CCAAAAGAAACTTAAGGGAA+TGG | + | chr8_3:66197510-66197529 | None:intergenic | 35.0% | |
| ! | CCATTCCCTTAAGTTTCTTT+TGG | - | chr8_3:66197507-66197526 | Msa1303230:three_prime_UTR | 35.0% |
| TTTCTTGTTCCTATGGTTCT+TGG | - | chr8_3:66197626-66197645 | Msa1303230:three_prime_UTR | 35.0% | |
| GTAATTTATCGTCAGAGATG+TGG | - | chr8_3:66197662-66197681 | Msa1303230:CDS | 35.0% | |
| GGTATCATCACTTTCTTTCT+TGG | - | chr8_3:66197683-66197702 | Msa1303230:CDS | 35.0% | |
| ! | TATGGTGTGTGATTGGATTT+TGG | - | chr8_3:66197869-66197888 | Msa1303230:intron | 35.0% |
| !! | GATGGATTGTTGAAAGAAGA+AGG | - | chr8_3:66197954-66197973 | Msa1303230:intron | 35.0% |
| CCAACATACTCAATAACAGA+TGG | + | chr8_3:66198020-66198039 | None:intergenic | 35.0% | |
| CCATCTGTTATTGAGTATGT+TGG | - | chr8_3:66198017-66198036 | Msa1303230:CDS | 35.0% | |
| !!! | GTTGGTTTTTGTCTTTGTTG+TGG | - | chr8_3:66198035-66198054 | Msa1303230:CDS | 35.0% |
| !!! | TGGTCCTGTTTTTGAAATGA+AGG | - | chr8_3:66198070-66198089 | Msa1303230:CDS | 35.0% |
| GATTATCTTGATTGGACTGA+AGG | - | chr8_3:66198092-66198111 | Msa1303230:intron | 35.0% | |
| ! | GCCCAATTTATCATGTTTTG+GGG | - | chr8_3:66198268-66198287 | Msa1303230:intron | 35.0% |
| CACCCCAAAACATGATAAAT+TGG | + | chr8_3:66198273-66198292 | None:intergenic | 35.0% | |
| TAGACAAGACAAAACTGTAC+TGG | - | chr8_3:66198343-66198362 | Msa1303230:intron | 35.0% | |
| AAAACTGTACTGGAGAAAGA+TGG | - | chr8_3:66198353-66198372 | Msa1303230:intron | 35.0% | |
| AACTGATCATGGGACAAAAA+AGG | + | chr8_3:66198512-66198531 | None:intergenic | 35.0% | |
| TAAAAACCAAAGAACTCGAC+TGG | + | chr8_3:66198566-66198585 | None:intergenic | 35.0% | |
| AATGTGGATAGCAGGAAATA+TGG | - | chr8_3:66198637-66198656 | Msa1303230:intron | 35.0% | |
| ATGTGGATAGCAGGAAATAT+GGG | - | chr8_3:66198638-66198657 | Msa1303230:intron | 35.0% | |
| TTGTCAAGTAAGGACTATAG+TGG | + | chr8_3:66198701-66198720 | None:intergenic | 35.0% | |
| !!! | ACTTCAAGCTGGTTTTTGTA+TGG | - | chr8_3:66198923-66198942 | Msa1303230:intron | 35.0% |
| !!! | CTTCAAGCTGGTTTTTGTAT+GGG | - | chr8_3:66198924-66198943 | Msa1303230:intron | 35.0% |
| CCATTCATGATATGAAGGTT+CGG | + | chr8_3:66198994-66199013 | None:intergenic | 35.0% | |
| AAGCACCATTCATGATATGA+AGG | + | chr8_3:66198999-66199018 | None:intergenic | 35.0% | |
| GAAGCTTCTATTATCATCTC+TGG | - | chr8_3:66199095-66199114 | Msa1303230:CDS | 35.0% | |
| TTCTATTATCATCTCTGGCT+TGG | - | chr8_3:66199100-66199119 | Msa1303230:CDS | 35.0% | |
| ! | TCTATTATCATCTCTGGCTT+GGG | - | chr8_3:66199101-66199120 | Msa1303230:CDS | 35.0% |
| GTTTCAGTTCTTTACTTGCA+CGG | - | chr8_3:66199274-66199293 | Msa1303230:CDS | 35.0% | |
| !!! | ACTTGATGGTTTTCAAGTTC+TGG | - | chr8_3:66199353-66199372 | Msa1303230:CDS | 35.0% |
| ! | TTTTCATGTTGGTACCTGTT+TGG | - | chr8_3:66199397-66199416 | Msa1303230:CDS | 35.0% |
| TTGTTCCTACCCTTTAAACT+AGG | - | chr8_3:66199568-66199587 | Msa1303230:intron | 35.0% | |
| TGCATCTAGCCTAGTTTAAA+GGG | + | chr8_3:66199580-66199599 | None:intergenic | 35.0% | |
| TTGCATCTAGCCTAGTTTAA+AGG | + | chr8_3:66199581-66199600 | None:intergenic | 35.0% | |
| TTCTTCGGAAAAACCAACAA+AGG | - | chr8_3:66199882-66199901 | Msa1303230:intron | 35.0% | |
| ATGACTATCTGTTCCTTTGT+TGG | + | chr8_3:66199898-66199917 | None:intergenic | 35.0% | |
| ATCACTCTTGTGAATTGTGA+TGG | - | chr8_3:66199925-66199944 | Msa1303230:intron | 35.0% | |
| ! | GTTCTAAGTTATTCCTGTGT+TGG | - | chr8_3:66200277-66200296 | Msa1303230:CDS | 35.0% |
| TTTGTGTGCTGTGTTTGAAT+AGG | - | chr8_3:66200492-66200511 | Msa1303230:intron | 35.0% | |
| AAAATACACGCTTCCATATG+AGG | + | chr8_3:66200542-66200561 | None:intergenic | 35.0% | |
| CCAAGAAGGATGATAACAAT+AGG | + | chr8_3:66200580-66200599 | None:intergenic | 35.0% | |
| CCTATTGTTATCATCCTTCT+TGG | - | chr8_3:66200577-66200596 | Msa1303230:CDS | 35.0% | |
| AACAGTGCAGTTATTCTCTT+TGG | - | chr8_3:66200659-66200678 | Msa1303230:CDS | 35.0% | |
| !! | CTTTAGTCTTGGAAATGGTT+CGG | - | chr8_3:66200777-66200796 | Msa1303230:CDS | 35.0% |
| GTTAGAAACATCGATGTTGA+CGG | - | chr8_3:66200843-66200862 | Msa1303230:CDS | 35.0% | |
| TTAGAAACATCGATGTTGAC+GGG | - | chr8_3:66200844-66200863 | Msa1303230:CDS | 35.0% | |
| !! | CTGTGATTTTAGTGCTCTTT+TGG | - | chr8_3:66200913-66200932 | Msa1303230:five_prime_UTR | 35.0% |
| AATGACGTGATTACCCTTAC+CGG | + | chr8_3:66197278-66197297 | None:intergenic | 40.0% | |
| !! | TTCTTTTGGCGTTTTGTTCC+TGG | - | chr8_3:66197521-66197540 | Msa1303230:three_prime_UTR | 40.0% |
| GAAGCATAACCAAGAACCAT+AGG | + | chr8_3:66197638-66197657 | None:intergenic | 40.0% | |
| GGTTCTTGGTTATGCTTCTA+TGG | - | chr8_3:66197640-66197659 | Msa1303230:exon | 40.0% | |
| !! | GGTGATTTTAGGGGCTTTAA+TGG | - | chr8_3:66197890-66197909 | Msa1303230:intron | 40.0% |
| TTGATTGGACTGAAGGACAA+GGG | - | chr8_3:66198099-66198118 | Msa1303230:intron | 40.0% | |
| AGATGTCCCATGGTTTAGTA+AGG | - | chr8_3:66198451-66198470 | Msa1303230:intron | 40.0% | |
| GATGTCCCATGGTTTAGTAA+GGG | - | chr8_3:66198452-66198471 | Msa1303230:intron | 40.0% | |
| TGTTGTCAAATGTGGATAGC+AGG | - | chr8_3:66198629-66198648 | Msa1303230:intron | 40.0% | |
| TGTTTAGATTCCTCTATGCC+AGG | - | chr8_3:66198759-66198778 | Msa1303230:intron | 40.0% | |
| CCGAACCTTCATATCATGAA+TGG | - | chr8_3:66198991-66199010 | Msa1303230:intron | 40.0% | |
| CATATCATGAATGGTGCTTC+TGG | - | chr8_3:66199000-66199019 | Msa1303230:intron | 40.0% | |
| ! | ATGGTGCTTCTGGAAAAAGT+TGG | - | chr8_3:66199010-66199029 | Msa1303230:intron | 40.0% |
| ! | TGGTGCTTCTGGAAAAAGTT+GGG | - | chr8_3:66199011-66199030 | Msa1303230:intron | 40.0% |
| TTGGGTTACCAGTATATGTC+TGG | - | chr8_3:66199029-66199048 | Msa1303230:intron | 40.0% | |
| CTGTTAAGCCAGACATATAC+TGG | + | chr8_3:66199040-66199059 | None:intergenic | 40.0% | |
| TTGGGACAGAGCTAAAAATG+TGG | - | chr8_3:66199163-66199182 | Msa1303230:CDS | 40.0% | |
| ACTTGAATATTCCACACAGC+TGG | + | chr8_3:66199230-66199249 | None:intergenic | 40.0% | |
| TAAATAGGGTGCAGACTTGA+TGG | - | chr8_3:66199339-66199358 | Msa1303230:CDS | 40.0% | |
| CTATGAAAATCAACTGCTGG+TGG | + | chr8_3:66199530-66199549 | None:intergenic | 40.0% | |
| TCTAGCCTAGTTTAAAGGGT+AGG | + | chr8_3:66199576-66199595 | None:intergenic | 40.0% | |
| TATGATAGGCTTATCCAGAG+TGG | - | chr8_3:66199674-66199693 | Msa1303230:intron | 40.0% | |
| ATGATAGGCTTATCCAGAGT+GGG | - | chr8_3:66199675-66199694 | Msa1303230:intron | 40.0% | |
| GCAAGTAACTGAAGAAATCC+TGG | + | chr8_3:66199707-66199726 | None:intergenic | 40.0% | |
| CACATGCCAAATAGCACTAA+CGG | + | chr8_3:66199738-66199757 | None:intergenic | 40.0% | |
| TTATTTCAGGGGTTGTATCC+TGG | - | chr8_3:66200045-66200064 | Msa1303230:intron | 40.0% | |
| !! | CAGTTAATTAACTTGCGCTG+CGG | - | chr8_3:66200157-66200176 | Msa1303230:intron | 40.0% |
| !! | AGGGCATTTTTAACTGTTGG+AGG | + | chr8_3:66200226-66200245 | None:intergenic | 40.0% |
| TCCAACAGTTAAAAATGCCC+TGG | - | chr8_3:66200225-66200244 | Msa1303230:CDS | 40.0% | |
| !! | ACCAGGGCATTTTTAACTGT+TGG | + | chr8_3:66200229-66200248 | None:intergenic | 40.0% |
| AGCAAAATTAGCGAACACCA+GGG | + | chr8_3:66200245-66200264 | None:intergenic | 40.0% | |
| AAGCAAAATTAGCGAACACC+AGG | + | chr8_3:66200246-66200265 | None:intergenic | 40.0% | |
| !! | TTATTCCTGTGTTGGCTTCA+TGG | - | chr8_3:66200285-66200304 | Msa1303230:CDS | 40.0% |
| TGTGAATGTGTTTGTGTGAG+TGG | + | chr8_3:66200404-66200423 | None:intergenic | 40.0% | |
| CATGAAACTCTTGCCTCATA+TGG | - | chr8_3:66200526-66200545 | Msa1303230:CDS | 40.0% | |
| GCTTGATCACTTTACCAAGA+AGG | + | chr8_3:66200594-66200613 | None:intergenic | 40.0% | |
| ! | TTCCTTTTGAGCTTTCGATC+TGG | + | chr8_3:66200629-66200648 | None:intergenic | 40.0% |
| AAAGCTCAAAAGGAAGAGTG+AGG | - | chr8_3:66200634-66200653 | Msa1303230:CDS | 40.0% | |
| !! | TCAAATTAGGATAGTGGGAG+AGG | - | chr8_3:66200693-66200712 | Msa1303230:CDS | 40.0% |
| TGTAACAGCTCCTTTAGTCT+TGG | - | chr8_3:66200766-66200785 | Msa1303230:CDS | 40.0% | |
| !! | AGCTCCTTTAGTCTTGGAAA+TGG | - | chr8_3:66200772-66200791 | Msa1303230:CDS | 40.0% |
| CGAACCATTTCCAAGACTAA+AGG | + | chr8_3:66200779-66200798 | None:intergenic | 40.0% | |
| CAAACTATGACTGTGATGGC+CGG | - | chr8_3:66197256-66197275 | Msa1303230:three_prime_UTR | 45.0% | |
| !! | GGAATCAAGTTGAAGCTCCA+TGG | + | chr8_3:66197426-66197445 | None:intergenic | 45.0% |
| GGAGCTTCAACTTGATTCCA+TGG | - | chr8_3:66197427-66197446 | Msa1303230:three_prime_UTR | 45.0% | |
| GACGGAAACACCAATTGAAG+CGG | + | chr8_3:66197453-66197472 | None:intergenic | 45.0% | |
| AAGTGTTTAGGAAGACGACC+AGG | + | chr8_3:66197542-66197561 | None:intergenic | 45.0% | |
| AGAGAGAAAAACACCAACGG+CGG | + | chr8_3:66197573-66197592 | None:intergenic | 45.0% | |
| ATTACATGAGCGGTGATGCT+TGG | - | chr8_3:66197735-66197754 | Msa1303230:CDS | 45.0% | |
| ACTGGTAGTCTCTACTCTGA+AGG | - | chr8_3:66197779-66197798 | Msa1303230:intron | 45.0% | |
| ! | TGTTGTGGAAGTCACTTTGC+TGG | - | chr8_3:66198050-66198069 | Msa1303230:CDS | 45.0% |
| CTTGATTGGACTGAAGGACA+AGG | - | chr8_3:66198098-66198117 | Msa1303230:intron | 45.0% | |
| TGATTGGACTGAAGGACAAG+GGG | - | chr8_3:66198100-66198119 | Msa1303230:intron | 45.0% | |
| CTGTACTGGAGAAAGATGGA+AGG | - | chr8_3:66198357-66198376 | Msa1303230:intron | 45.0% | |
| CTAGATCGAAAGATGTCCCA+TGG | - | chr8_3:66198441-66198460 | Msa1303230:intron | 45.0% | |
| CGTGTCCCTTACTAAACCAT+GGG | + | chr8_3:66198460-66198479 | None:intergenic | 45.0% | |
| TCGTGTCCCTTACTAAACCA+TGG | + | chr8_3:66198461-66198480 | None:intergenic | 45.0% | |
| AGTTGTCCAGTCGAGTTCTT+TGG | - | chr8_3:66198557-66198576 | Msa1303230:CDS | 45.0% | |
| GCTATGCAACAGTGCTATAG+CGG | - | chr8_3:66198675-66198694 | Msa1303230:intron | 45.0% | |
| GGCAAAATATCGTTATGGCC+TGG | + | chr8_3:66198780-66198799 | None:intergenic | 45.0% | |
| GGACCAAAACCATCACCATA+TGG | - | chr8_3:66198882-66198901 | Msa1303230:intron | 45.0% | |
| !!! | GCACCATATGGTGATGGTTT+TGG | + | chr8_3:66198888-66198907 | None:intergenic | 45.0% |
| AGTGTTGCACCATATGGTGA+TGG | + | chr8_3:66198894-66198913 | None:intergenic | 45.0% | |
| TCAGAGGAAAATAAGGCACG+AGG | + | chr8_3:66198962-66198981 | None:intergenic | 45.0% | |
| ! | GGTTCGGTAAACTTAGTCAG+AGG | + | chr8_3:66198978-66198997 | None:intergenic | 45.0% |
| !!! | TTTTTAGCTCTGTCCCAACG+CGG | + | chr8_3:66199161-66199180 | None:intergenic | 45.0% |
| CAGTTGTAATTCCAGCTGTG+TGG | - | chr8_3:66199216-66199235 | Msa1303230:CDS | 45.0% | |
| GGAATATTCAAGTCAGCACC+TGG | - | chr8_3:66199237-66199256 | Msa1303230:CDS | 45.0% | |
| AATAGCACTAACGGTCTGTG+TGG | + | chr8_3:66199729-66199748 | None:intergenic | 45.0% | |
| ! | CACAGACCGTTAGTGCTATT+TGG | - | chr8_3:66199729-66199748 | Msa1303230:intron | 45.0% |
| TACCACGAAACAACTTTGCC+AGG | - | chr8_3:66199970-66199989 | Msa1303230:intron | 45.0% | |
| AACGGTACAAAATAGCAGCC+TGG | + | chr8_3:66199991-66200010 | None:intergenic | 45.0% | |
| !! | CAGTCAGCATTGATGATTGC+TGG | - | chr8_3:66200087-66200106 | Msa1303230:intron | 45.0% |
| !! | TTGATGATTGCTGGTTCCAG+AGG | - | chr8_3:66200096-66200115 | Msa1303230:intron | 45.0% |
| GTCATTTACAGATGGCAGCA+AGG | - | chr8_3:66200196-66200215 | Msa1303230:CDS | 45.0% | |
| CTTGGTAAAGTGATCAAGCC+TGG | - | chr8_3:66200595-66200614 | Msa1303230:CDS | 45.0% | |
| GTAAAGTGATCAAGCCTGGA+AGG | - | chr8_3:66200599-66200618 | Msa1303230:CDS | 45.0% | |
| ! | TTTTGAGCTTTCGATCTGGC+AGG | + | chr8_3:66200625-66200644 | None:intergenic | 45.0% |
| TGCCAGATCGAAAGCTCAAA+AGG | - | chr8_3:66200624-66200643 | Msa1303230:CDS | 45.0% | |
| !!! | TTTTTTATATTTTATTATTG+AGG | - | chr8_3:66197834-66197853 | Msa1303230:intron | 5.0% |
| !!! | TTTTTATATTTTATTATTGA+GGG | - | chr8_3:66197835-66197854 | Msa1303230:intron | 5.0% |
| TATGACTGTGATGGCCGGTA+AGG | - | chr8_3:66197261-66197280 | Msa1303230:three_prime_UTR | 50.0% | |
| ATGACTGTGATGGCCGGTAA+GGG | - | chr8_3:66197262-66197281 | Msa1303230:three_prime_UTR | 50.0% | |
| !! | TCAAGTTGAAGCTCCATGGC+TGG | + | chr8_3:66197422-66197441 | None:intergenic | 50.0% |
| GATTCCATGGCCGCTTCAAT+TGG | - | chr8_3:66197440-66197459 | Msa1303230:three_prime_UTR | 50.0% | |
| AACACCAATTGAAGCGGCCA+TGG | + | chr8_3:66197447-66197466 | None:intergenic | 50.0% | |
| AGCGGTGATGCTTGGAAAGA+AGG | - | chr8_3:66197743-66197762 | Msa1303230:CDS | 50.0% | |
| GGTGATGCTTGGAAAGAAGG+TGG | - | chr8_3:66197746-66197765 | Msa1303230:CDS | 50.0% | |
| GAAGGTGGAATCGATGCAAC+TGG | - | chr8_3:66197761-66197780 | Msa1303230:CDS | 50.0% | |
| ATCGTTATGGCCTGGCATAG+AGG | + | chr8_3:66198772-66198791 | None:intergenic | 50.0% | |
| !! | GCTCGAAGTGTTGCACCATA+TGG | + | chr8_3:66198900-66198919 | None:intergenic | 50.0% |
| CTTCGAGCTCTACTTCAAGC+TGG | - | chr8_3:66198912-66198931 | Msa1303230:intron | 50.0% | |
| ! | TGTCTGGCTTAACAGCACGT+TGG | - | chr8_3:66199045-66199064 | Msa1303230:CDS | 50.0% |
| !! | ATCTCTGGCTTGGGTTTCAG+TGG | - | chr8_3:66199110-66199129 | Msa1303230:CDS | 50.0% |
| AAACTCACAATGGCGAAGCC+AGG | + | chr8_3:66199258-66199277 | None:intergenic | 50.0% | |
| ! | AGCCTGGCAAAGTTGTTTCG+TGG | + | chr8_3:66199975-66199994 | None:intergenic | 50.0% |
| GCAAACCATGAAGCCAACAC+AGG | + | chr8_3:66200293-66200312 | None:intergenic | 50.0% | |
| !! | ATTAGGATAGTGGGAGAGGC+TGG | - | chr8_3:66200697-66200716 | Msa1303230:CDS | 50.0% |
| GGCTGGATCTTCAGTTTCCA+CGG | - | chr8_3:66200718-66200737 | Msa1303230:CDS | 50.0% | |
| GCTGGATCTTCAGTTTCCAC+GGG | - | chr8_3:66200719-66200738 | Msa1303230:CDS | 50.0% | |
| CTGGATCTTCAGTTTCCACG+GGG | - | chr8_3:66200720-66200739 | Msa1303230:CDS | 50.0% | |
| GCAGAGAAGGAAGCGGAGAA+CGG | + | chr8_3:66197477-66197496 | None:intergenic | 55.0% | |
| CGACGAAGCAGAGAAGGAAG+CGG | + | chr8_3:66197484-66197503 | None:intergenic | 55.0% | |
| !! | GCGGCGGAGTAGAAGTGTTT+AGG | + | chr8_3:66197554-66197573 | None:intergenic | 55.0% |
| GAGAAAAACACCAACGGCGG+CGG | + | chr8_3:66197570-66197589 | None:intergenic | 55.0% | |
| ATCCAGAGTGGGAAGAAGCC+AGG | - | chr8_3:66199686-66199705 | Msa1303230:intron | 55.0% | |
| ATCCTGGCTTCTTCCCACTC+TGG | + | chr8_3:66199691-66199710 | None:intergenic | 55.0% | |
| AAAACCAGAGCTGAACCCCG+TGG | + | chr8_3:66200738-66200757 | None:intergenic | 55.0% | |
| GGCTCGTTGTGCTGTGTGGT+TGG | + | chr8_3:66197401-66197420 | None:intergenic | 60.0% | |
| ACAGCACAACGAGCCAGCCA+TGG | - | chr8_3:66197406-66197425 | Msa1303230:three_prime_UTR | 60.0% | |
| AAGGAAGCGGAGAACGGCGA+CGG | + | chr8_3:66197471-66197490 | None:intergenic | 60.0% | |
| ! | TGGTGGCGACGAAGCAGAGA+AGG | + | chr8_3:66197490-66197509 | None:intergenic | 60.0% |
| !! | CTGGCTTGGGTTTCAGTGGC+TGG | - | chr8_3:66199114-66199133 | Msa1303230:CDS | 60.0% |
| CTCTCCACCAAAGCCGCGTT+GGG | - | chr8_3:66199145-66199164 | Msa1303230:CDS | 60.0% | |
| TTCGATCTGGCAGGCCTTCC+AGG | + | chr8_3:66200616-66200635 | None:intergenic | 60.0% | |
| GTTTCCACGGGGTTCAGCTC+TGG | - | chr8_3:66200731-66200750 | Msa1303230:CDS | 60.0% | |
| !! | GGCTGGCTCGTTGTGCTGTG+TGG | + | chr8_3:66197405-66197424 | None:intergenic | 65.0% |
| CACTTCTACTCCGCCGCCGT+TGG | - | chr8_3:66197557-66197576 | Msa1303230:three_prime_UTR | 65.0% | |
| ! | CCAACGCGGCTTTGGTGGAG+AGG | + | chr8_3:66199147-66199166 | None:intergenic | 65.0% |
| CCTCTCCACCAAAGCCGCGT+TGG | - | chr8_3:66199144-66199163 | Msa1303230:CDS | 65.0% | |
| ! | CTGTCCCAACGCGGCTTTGG+TGG | + | chr8_3:66199152-66199171 | None:intergenic | 65.0% |
| GCTCTGTCCCAACGCGGCTT+TGG | + | chr8_3:66199155-66199174 | None:intergenic | 65.0% | |
| !! | GGATAGTGGGAGAGGCTGGC+TGG | - | chr8_3:66200701-66200720 | Msa1303230:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 66197234 | 66201070 | 66197234 | ID=Msa1303230;Name=Msa1303230 |
| chr8_3 | mRNA | 66197234 | 66201070 | 66197234 | ID=Msa1303230-mRNA-1;Parent=Msa1303230;Name=Msa1303230-mRNA-1;_AED=0.01;_eAED=0.01;_QI=191|1|1|1|1|1|7|416|462 |
| chr8_3 | exon | 66197234 | 66197790 | 66197234 | ID=Msa1303230-mRNA-1:exon:20147;Parent=Msa1303230-mRNA-1 |
| chr8_3 | exon | 66197998 | 66198107 | 66197998 | ID=Msa1303230-mRNA-1:exon:20146;Parent=Msa1303230-mRNA-1 |
| chr8_3 | exon | 66198187 | 66198250 | 66198187 | ID=Msa1303230-mRNA-1:exon:20145;Parent=Msa1303230-mRNA-1 |
| chr8_3 | exon | 66198550 | 66198635 | 66198550 | ID=Msa1303230-mRNA-1:exon:20144;Parent=Msa1303230-mRNA-1 |
| chr8_3 | exon | 66199035 | 66199443 | 66199035 | ID=Msa1303230-mRNA-1:exon:20143;Parent=Msa1303230-mRNA-1 |
| chr8_3 | exon | 66200183 | 66200403 | 66200183 | ID=Msa1303230-mRNA-1:exon:20142;Parent=Msa1303230-mRNA-1 |
| chr8_3 | exon | 66200522 | 66201070 | 66200522 | ID=Msa1303230-mRNA-1:exon:20141;Parent=Msa1303230-mRNA-1 |
| chr8_3 | five_prime_UTR | 66200880 | 66201070 | 66200880 | ID=Msa1303230-mRNA-1:five_prime_utr;Parent=Msa1303230-mRNA-1 |
| chr8_3 | CDS | 66200522 | 66200879 | 66200522 | ID=Msa1303230-mRNA-1:cds;Parent=Msa1303230-mRNA-1 |
| chr8_3 | CDS | 66200183 | 66200403 | 66200183 | ID=Msa1303230-mRNA-1:cds;Parent=Msa1303230-mRNA-1 |
| chr8_3 | CDS | 66199035 | 66199443 | 66199035 | ID=Msa1303230-mRNA-1:cds;Parent=Msa1303230-mRNA-1 |
| chr8_3 | CDS | 66198550 | 66198635 | 66198550 | ID=Msa1303230-mRNA-1:cds;Parent=Msa1303230-mRNA-1 |
| chr8_3 | CDS | 66198187 | 66198250 | 66198187 | ID=Msa1303230-mRNA-1:cds;Parent=Msa1303230-mRNA-1 |
| chr8_3 | CDS | 66197998 | 66198107 | 66197998 | ID=Msa1303230-mRNA-1:cds;Parent=Msa1303230-mRNA-1 |
| chr8_3 | CDS | 66197650 | 66197790 | 66197650 | ID=Msa1303230-mRNA-1:cds;Parent=Msa1303230-mRNA-1 |
| chr8_3 | three_prime_UTR | 66197234 | 66197649 | 66197234 | ID=Msa1303230-mRNA-1:three_prime_utr;Parent=Msa1303230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
