Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208170 | XP_013457675.1 | 98.485 | 462 | 7 | 0 | 1 | 462 | 1 | 462 | 0.0 | 934 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208170 | sp|F4IDU4|MBOA1_ARATH | 76.242 | 463 | 106 | 2 | 3 | 462 | 1 | 462 | 0.0 | 720 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208170 | A0A072UQR7 | 98.485 | 462 | 7 | 0 | 1 | 462 | 1 | 462 | 0.0 | 934 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0049780 | Msa1208170 | 0.814061 | 1.865933e-51 | -8.615850e-47 |
| Msa1208170 | Msa1208440 | 0.872297 | 3.542828e-67 | -8.615850e-47 |
| Msa1208170 | Msa1303230 | 0.910887 | 1.132026e-82 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208170 | MtrunA17_Chr4g0057271 | 98.485 | 462 | 7 | 0 | 1 | 462 | 1 | 462 | 0.0 | 934 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208170 | AT1G12640.1 | 76.242 | 463 | 106 | 2 | 3 | 462 | 1 | 462 | 0.0 | 720 |
| Msa1208170 | AT1G63050.1 | 75.162 | 463 | 111 | 2 | 3 | 462 | 4 | 465 | 0.0 | 707 |
Find 135 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCACTTTCTTTCTTGGATT+TGG | 0.199879 | 8_1:-66145100 | Msa1208170:CDS |
| GGTATCATCACTTTCTTTCT+TGG | 0.213299 | 8_1:-66145106 | Msa1208170:CDS |
| TTTCTTGTTCCTATGGTTCT+TGG | 0.214151 | 8_1:-66145163 | Msa1208170:CDS |
| TTCGATCTGGCAGGCCTTCC+AGG | 0.216933 | 8_1:+66142178 | None:intergenic |
| CACAGACCGTTAGTGCTATT+TGG | 0.218362 | 8_1:-66143060 | Msa1208170:CDS |
| CCTATTGTTATCATCCTTCT+TGG | 0.234661 | 8_1:-66142214 | Msa1208170:CDS |
| TTATTCCTGTGTTGGCTTCA+TGG | 0.237906 | 8_1:-66142504 | Msa1208170:intron |
| GGTTCTTGGTTATGCTTCTA+TGG | 0.244748 | 8_1:-66145149 | Msa1208170:CDS |
| AACAGTGCAGTTATTCTCTT+TGG | 0.270236 | 8_1:-66142132 | Msa1208170:three_prime_UTR |
| GATTTGTAGATTTGGAATTT+TGG | 0.278800 | 8_1:-66143937 | Msa1208170:intron |
| TTTCTCTCTTATCTTTCATT+TGG | 0.281170 | 8_1:-66145205 | Msa1208170:CDS |
| CCATTCCCTTAAGTTTCTTT+TGG | 0.281676 | 8_1:-66145282 | Msa1208170:CDS |
| ATTGAGATATAACGAAGTTT+TGG | 0.284592 | 8_1:+66145421 | None:intergenic |
| ACTTGTTTGCATTAATTGTT+TGG | 0.308449 | 8_1:+66141846 | None:intergenic |
| GCACCATATGGTGATGGTTT+TGG | 0.315250 | 8_1:+66143904 | None:intergenic |
| TTGAAATCAAATTAGGATAG+TGG | 0.315943 | 8_1:-66142104 | Msa1208170:three_prime_UTR |
| CATATCATGAATGGTGCTTC+TGG | 0.319810 | 8_1:-66143789 | Msa1208170:CDS |
| TGTTGTGGAAGTCACTTTGC+TGG | 0.320070 | 8_1:-66144738 | Msa1208170:CDS |
| GCTCTGTCCCAACGCGGCTT+TGG | 0.320400 | 8_1:+66143637 | None:intergenic |
| TTCTATTATCATCTCTGGCT+TGG | 0.327718 | 8_1:-66143689 | Msa1208170:CDS |
| CTGGCTTGGGTTTCAGTGGC+TGG | 0.334935 | 8_1:-66143675 | Msa1208170:CDS |
| GTTGGAAATATTATTTCATT+TGG | 0.336497 | 8_1:-66143726 | Msa1208170:CDS |
| TACCAAAGCATGCACCATTT+AGG | 0.337015 | 8_1:+66141739 | None:intergenic |
| AAATGAAGGATTATCTTGAT+TGG | 0.344307 | 8_1:-66144704 | Msa1208170:CDS |
| CAGTCAGCATTGATGATTGC+TGG | 0.350154 | 8_1:-66142702 | Msa1208170:CDS |
| CATGAAACTCTTGCCTCATA+TGG | 0.355168 | 8_1:-66142265 | Msa1208170:CDS |
| AACTTAGTCAGAGGAAAATA+AGG | 0.357630 | 8_1:+66143823 | None:intergenic |
| TCTATTATCATCTCTGGCTT+GGG | 0.358985 | 8_1:-66143688 | Msa1208170:CDS |
| GTTCTAAGTTATTCCTGTGT+TGG | 0.360919 | 8_1:-66142512 | Msa1208170:CDS |
| GATTCCATGGCCGCTTCAAT+TGG | 0.370021 | 8_1:-66145349 | Msa1208170:CDS |
| CTGTCCCAACGCGGCTTTGG+TGG | 0.377191 | 8_1:+66143640 | None:intergenic |
| GAAGCTTCTATTATCATCTC+TGG | 0.389427 | 8_1:-66143694 | Msa1208170:CDS |
| AGCTCCTTTAGTCTTGGAAA+TGG | 0.391446 | 8_1:-66142019 | Msa1208170:three_prime_UTR |
| CTCTCCACCAAAGCCGCGTT+GGG | 0.392120 | 8_1:-66143644 | Msa1208170:CDS |
| CTGTTAAGCCAGACATATAC+TGG | 0.392279 | 8_1:+66143752 | None:intergenic |
| AGTGATTATTGAAGAAATGT+TGG | 0.392740 | 8_1:-66141916 | Msa1208170:three_prime_UTR |
| CAGATGGCAATTTAATTAAA+CGG | 0.392771 | 8_1:+66144787 | None:intergenic |
| GCGGCGGAGTAGAAGTGTTT+AGG | 0.394399 | 8_1:+66145238 | None:intergenic |
| GTTTCCACGGGGTTCAGCTC+TGG | 0.399134 | 8_1:-66142060 | Msa1208170:three_prime_UTR |
| ATCCTAAATGGTGCATGCTT+TGG | 0.399412 | 8_1:-66141741 | None:intergenic |
| AATTGTTGAGATTCAATTCA+AGG | 0.400428 | 8_1:+66145475 | None:intergenic |
| AAAATACACGCTTCCATATG+AGG | 0.415312 | 8_1:+66142252 | None:intergenic |
| GGCTGGATCTTCAGTTTCCA+CGG | 0.419594 | 8_1:-66142073 | Msa1208170:three_prime_UTR |
| GATGGATTGTTGAAAGAAGA+AGG | 0.421814 | 8_1:-66144834 | Msa1208170:CDS |
| TGTAACAGCTCCTTTAGTCT+TGG | 0.425070 | 8_1:-66142025 | Msa1208170:three_prime_UTR |
| GGCTCGTTGTGCTGTGTGGT+TGG | 0.435782 | 8_1:+66145391 | None:intergenic |
| CCAAGAAGGATGATAACAAT+AGG | 0.436962 | 8_1:+66142214 | None:intergenic |
| CTTTAGTCTTGGAAATGGTT+CGG | 0.437912 | 8_1:-66142014 | Msa1208170:three_prime_UTR |
| TTATTTCAGGGGTTGTATCC+TGG | 0.439877 | 8_1:-66142744 | Msa1208170:intron |
| TTGGATGACACAATCTTTGA+AGG | 0.447631 | 8_1:-66145565 | None:intergenic |
| TTGGGTTACCAGTATATGTC+TGG | 0.449963 | 8_1:-66143760 | Msa1208170:CDS |
| GTGATTATTGAAGAAATGTT+GGG | 0.454579 | 8_1:-66141915 | Msa1208170:three_prime_UTR |
| GCTGGATCTTCAGTTTCCAC+GGG | 0.460572 | 8_1:-66142072 | Msa1208170:three_prime_UTR |
| AAACGCCAAAAGAAACTTAA+GGG | 0.461538 | 8_1:+66145277 | None:intergenic |
| TGAAATCAAATTAGGATAGT+GGG | 0.462375 | 8_1:-66142103 | Msa1208170:three_prime_UTR |
| AAAACGCCAAAAGAAACTTA+AGG | 0.462926 | 8_1:+66145276 | None:intergenic |
| GGATAGTGGGAGAGGCTGGC+TGG | 0.465788 | 8_1:-66142090 | Msa1208170:three_prime_UTR |
| CCGAACCTTCATATCATGAA+TGG | 0.466521 | 8_1:-66143798 | Msa1208170:CDS |
| AATGACGTGATTACCCTTAC+CGG | 0.469655 | 8_1:+66145513 | None:intergenic |
| CCATCTGTTATTGAGTATGT+TGG | 0.475781 | 8_1:-66144771 | Msa1208170:CDS |
| ATTACATGAGCGGTGATGCT+TGG | 0.476065 | 8_1:-66145054 | Msa1208170:CDS |
| ATTAGGATAGTGGGAGAGGC+TGG | 0.476278 | 8_1:-66142094 | Msa1208170:three_prime_UTR |
| GCTCGAAGTGTTGCACCATA+TGG | 0.482462 | 8_1:+66143892 | None:intergenic |
| TGCCAGATCGAAAGCTCAAA+AGG | 0.484458 | 8_1:-66142167 | Msa1208170:CDS |
| ATCTCTGGCTTGGGTTTCAG+TGG | 0.486889 | 8_1:-66143679 | Msa1208170:CDS |
| TCAAGTTGAAGCTCCATGGC+TGG | 0.489644 | 8_1:+66145370 | None:intergenic |
| AACACCAATTGAAGCGGCCA+TGG | 0.492799 | 8_1:+66145345 | None:intergenic |
| GCAAGTAACTGAAGAAATCC+TGG | 0.496211 | 8_1:+66143085 | None:intergenic |
| ACAGCACAACGAGCCAGCCA+TGG | 0.498916 | 8_1:-66145383 | Msa1208170:exon |
| CCATTCATGATATGAAGGTT+CGG | 0.506149 | 8_1:+66143798 | None:intergenic |
| GATTATCTTGATTGGACTGA+AGG | 0.506375 | 8_1:-66144696 | Msa1208170:CDS |
| GGACCAAAACCATCACCATA+TGG | 0.507670 | 8_1:-66143907 | Msa1208170:CDS |
| CACTTCTACTCCGCCGCCGT+TGG | 0.513594 | 8_1:-66145232 | Msa1208170:CDS |
| TCAAATTAGGATAGTGGGAG+AGG | 0.513746 | 8_1:-66142098 | Msa1208170:three_prime_UTR |
| GTTAGAAACATCAATGTTGA+CGG | 0.514603 | 8_1:-66141948 | Msa1208170:three_prime_UTR |
| GGAGCTTCAACTTGATTCCA+TGG | 0.514766 | 8_1:-66145362 | Msa1208170:CDS |
| GAAGGTGGAATCGATGCAAC+TGG | 0.519690 | 8_1:-66145028 | Msa1208170:intron |
| AAGCAAAATTAGCGAACACC+AGG | 0.524642 | 8_1:+66142546 | None:intergenic |
| CCTCTCCACCAAAGCCGCGT+TGG | 0.529654 | 8_1:-66143645 | Msa1208170:CDS |
| ACAAAGAATATAATGTATCC+AGG | 0.530643 | 8_1:+66142726 | None:intergenic |
| CGAACCATTTCCAAGACTAA+AGG | 0.533406 | 8_1:+66142015 | None:intergenic |
| TGTGACTGTGATGGCCGGTA+AGG | 0.537110 | 8_1:-66145527 | Msa1208170:five_prime_UTR |
| GCAGAGAAGGAAGCGGAGAA+CGG | 0.537707 | 8_1:+66145315 | None:intergenic |
| ATCCTGGCTTCTTCCCACTC+TGG | 0.537883 | 8_1:+66143101 | None:intergenic |
| AAGCACCATTCATGATATGA+AGG | 0.537918 | 8_1:+66143793 | None:intergenic |
| ATCCAGAGTGGGAAGAAGCC+AGG | 0.538068 | 8_1:-66143103 | Msa1208170:CDS |
| CTTGGTAAAGTGATCAAGCC+TGG | 0.542234 | 8_1:-66142196 | Msa1208170:CDS |
| ATGATAGGCTTATCCAGAGT+GGG | 0.543235 | 8_1:-66143114 | Msa1208170:CDS |
| ACTTGAATATTCCACACAGC+TGG | 0.544819 | 8_1:+66143562 | None:intergenic |
| GCTTGATCACTTTACCAAGA+AGG | 0.546312 | 8_1:+66142200 | None:intergenic |
| AGCGGTGATGCTTGGAAAGA+AGG | 0.547981 | 8_1:-66145046 | Msa1208170:CDS |
| CTTCGAGCTCTACTTCAAGC+TGG | 0.550167 | 8_1:-66143877 | Msa1208170:CDS |
| TGGTGGCGACGAAGCAGAGA+AGG | 0.551712 | 8_1:+66145302 | None:intergenic |
| CGACGAAGCAGAGAAGGAAG+CGG | 0.551927 | 8_1:+66145308 | None:intergenic |
| TTCAAACAGTCATTTACAGA+TGG | 0.556918 | 8_1:-66142601 | Msa1208170:intron |
| AAGGAAGCGGAGAACGGCGA+CGG | 0.558050 | 8_1:+66145321 | None:intergenic |
| AAACTCACAATGGCGAAGCC+AGG | 0.558480 | 8_1:+66143534 | None:intergenic |
| GTAAAGTGATCAAGCCTGGA+AGG | 0.564430 | 8_1:-66142192 | Msa1208170:CDS |
| CCAAAAGAAACTTAAGGGAA+TGG | 0.567792 | 8_1:+66145282 | None:intergenic |
| GAAGCATAACCAAGAACCAT+AGG | 0.569556 | 8_1:+66145154 | None:intergenic |
| TTAGAAACATCAATGTTGAC+GGG | 0.569766 | 8_1:-66141947 | Msa1208170:three_prime_UTR |
| TGTGCAATTAATTATAACGA+TGG | 0.570026 | 8_1:-66144852 | Msa1208170:CDS |
| GGAATCAAGTTGAAGCTCCA+TGG | 0.572533 | 8_1:+66145366 | None:intergenic |
| GGCTGGCTCGTTGTGCTGTG+TGG | 0.573177 | 8_1:+66145387 | None:intergenic |
| GATGATAACAATAGGTAGAA+CGG | 0.584053 | 8_1:+66142222 | None:intergenic |
| CCAACGCGGCTTTGGTGGAG+AGG | 0.585335 | 8_1:+66143645 | None:intergenic |
| GGAATATTCAAGTCAGCACC+TGG | 0.589501 | 8_1:-66143552 | Msa1208170:CDS |
| CCAACATACTCAATAACAGA+TGG | 0.592112 | 8_1:+66144771 | None:intergenic |
| CACATGCCAAATAGCACTAA+CGG | 0.598601 | 8_1:+66143054 | None:intergenic |
| CTTGATTGGACTGAAGGACA+AGG | 0.599300 | 8_1:-66144690 | Msa1208170:CDS |
| TTGATGATTGCTGGTTCCAG+AGG | 0.599868 | 8_1:-66142693 | Msa1208170:intron |
| GTCATTTACAGATGGCAGCA+AGG | 0.605840 | 8_1:-66142593 | Msa1208170:CDS |
| TTGATTGGACTGAAGGACAA+GGG | 0.609966 | 8_1:-66144689 | Msa1208170:CDS |
| GTGACTGTGATGGCCGGTAA+GGG | 0.610894 | 8_1:-66145526 | Msa1208170:five_prime_UTR |
| GACGGAAACACCAATTGAAG+CGG | 0.615322 | 8_1:+66145339 | None:intergenic |
| GTAATTTATCGTCAGAGATG+TGG | 0.617829 | 8_1:-66145127 | Msa1208170:CDS |
| AGTGTTGCACCATATGGTGA+TGG | 0.624851 | 8_1:+66143898 | None:intergenic |
| GGTTCGGTAAACTTAGTCAG+AGG | 0.636544 | 8_1:+66143814 | None:intergenic |
| TATGATAGGCTTATCCAGAG+TGG | 0.639089 | 8_1:-66143115 | Msa1208170:CDS |
| CAAACTGTGACTGTGATGGC+CGG | 0.642447 | 8_1:-66145532 | Msa1208170:five_prime_UTR |
| ACAAACCATGAAGCCAACAC+AGG | 0.646385 | 8_1:+66142499 | None:intergenic |
| AAAGAAACTTAAGGGAATGG+TGG | 0.647769 | 8_1:+66145285 | None:intergenic |
| TGATTGGACTGAAGGACAAG+GGG | 0.649786 | 8_1:-66144688 | Msa1208170:intron |
| ACAACAAACTGTGACTGTGA+TGG | 0.655950 | 8_1:-66145536 | Msa1208170:five_prime_UTR |
| CTGGATCTTCAGTTTCCACG+GGG | 0.658077 | 8_1:-66142071 | Msa1208170:three_prime_UTR |
| TGTCATGTTTATTACATGAG+CGG | 0.662354 | 8_1:-66145064 | Msa1208170:CDS |
| AAAGCTCAAAAGGAAGAGTG+AGG | 0.671201 | 8_1:-66142157 | Msa1208170:exon |
| AAGTGTTTAGGAAGACGACC+AGG | 0.672673 | 8_1:+66145250 | None:intergenic |
| GGTGATGCTTGGAAAGAAGG+TGG | 0.677292 | 8_1:-66145043 | Msa1208170:CDS |
| AATAGCACTAACGGTCTGTG+TGG | 0.678558 | 8_1:+66143063 | None:intergenic |
| TCAGAGGAAAATAAGGCACG+AGG | 0.693182 | 8_1:+66143830 | None:intergenic |
| AGCAAAATTAGCGAACACCA+GGG | 0.693283 | 8_1:+66142547 | None:intergenic |
| TGTCTGGCTTAACAGCACGT+TGG | 0.696548 | 8_1:-66143744 | Msa1208170:CDS |
| CAGTTGTAATTCCAGCTGTG+TGG | 0.697153 | 8_1:-66143573 | Msa1208170:CDS |
| AAAACCAGAGCTGAACCCCG+TGG | 0.727745 | 8_1:+66142056 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATCAGCATAAATTAAATT+GGG | + | chr8_1:66142721-66142740 | None:intergenic | 15.0% |
| !! | TTTATATCGGAAAAATAAAA+AGG | - | chr8_1:66142897-66142916 | Msa1208170:intron | 15.0% |
| !! | TTATATCGGAAAAATAAAAA+GGG | - | chr8_1:66142898-66142917 | Msa1208170:intron | 15.0% |
| !!! | TTTTTGTATAAACGATTTAT+TGG | - | chr8_1:66143939-66143958 | Msa1208170:intron | 15.0% |
| !!! | ATTTTGACATTTTTATTTCA+GGG | - | chr8_1:66144541-66144560 | Msa1208170:intron | 15.0% |
| !! | ATGTTATGTTAATGTTAATC+TGG | - | chr8_1:66142633-66142652 | Msa1208170:intron | 20.0% |
| !! | CTTATCAGCATAAATTAAAT+TGG | + | chr8_1:66142722-66142741 | None:intergenic | 20.0% |
| !!! | AAGGATAGTCTTTTTTATAT+CGG | - | chr8_1:66142884-66142903 | Msa1208170:intron | 20.0% |
| !! | GTTGGAAATATTATTTCATT+TGG | - | chr8_1:66143571-66143590 | Msa1208170:CDS | 20.0% |
| !!! | GAAGAAAGATTATTTTAACA+TGG | + | chr8_1:66143966-66143985 | None:intergenic | 20.0% |
| !!! | TTTTTGTAGATGTTTATGAT+AGG | - | chr8_1:66144168-66144187 | Msa1208170:intron | 20.0% |
| !!! | CTTTCTATTTCTACTATATT+TGG | - | chr8_1:66144310-66144329 | Msa1208170:intron | 20.0% |
| !!! | ATATGAATTTTTCTTGTCAA+CGG | + | chr8_1:66144517-66144536 | None:intergenic | 20.0% |
| !!! | CATTTTGACATTTTTATTTC+AGG | - | chr8_1:66144540-66144559 | Msa1208170:intron | 20.0% |
| !!! | TTTTGACATTTTTATTTCAG+GGG | - | chr8_1:66144542-66144561 | Msa1208170:intron | 20.0% |
| !!! | AGCATTGAATTGTAATTTTA+TGG | - | chr8_1:66145327-66145346 | Msa1208170:CDS | 20.0% |
| ! | AATTGTTGAGATTCAATTCA+AGG | + | chr8_1:66141825-66141844 | None:intergenic | 25.0% |
| !! | ATTGAGATATAACGAAGTTT+TGG | + | chr8_1:66141879-66141898 | None:intergenic | 25.0% |
| ! | TTTCTCTCTTATCTTTCATT+TGG | - | chr8_1:66142092-66142111 | Msa1208170:three_prime_UTR | 25.0% |
| !! | TTGAGGGTTTTTGTTAATTA+TGG | - | chr8_1:66142360-66142379 | Msa1208170:intron | 25.0% |
| !!! | ATTGGATTTTGGTGATTTTA+GGG | - | chr8_1:66142389-66142408 | Msa1208170:intron | 25.0% |
| !!! | TTTAATGGTTTTGACATTGA+AGG | - | chr8_1:66142414-66142433 | Msa1208170:intron | 25.0% |
| ! | TGTGCAATTAATTATAACGA+TGG | - | chr8_1:66142445-66142464 | Msa1208170:intron | 25.0% |
| ! | CAGATGGCAATTTAATTAAA+CGG | + | chr8_1:66142513-66142532 | None:intergenic | 25.0% |
| ! | TAATCCTTCATTTCAAAAAC+AGG | + | chr8_1:66142586-66142605 | None:intergenic | 25.0% |
| ! | AAATGAAGGATTATCTTGAT+TGG | - | chr8_1:66142593-66142612 | Msa1208170:CDS | 25.0% |
| !!! | GAAAAATAAAAAGGGCATTT+TGG | - | chr8_1:66142906-66142925 | Msa1208170:intron | 25.0% |
| ! | TTGATTTAGAAACTGATCAT+GGG | + | chr8_1:66143030-66143049 | None:intergenic | 25.0% |
| !! | TTTGATTTAGAAACTGATCA+TGG | + | chr8_1:66143031-66143050 | None:intergenic | 25.0% |
| ! | ATCAGTTTCTAAATCAAACA+TGG | - | chr8_1:66143033-66143052 | Msa1208170:intron | 25.0% |
| ! | TTTATTAGTGTTGTCAAATG+TGG | - | chr8_1:66143129-66143148 | Msa1208170:intron | 25.0% |
| ! | TTGTTAAATAGCAGTTATAG+AGG | + | chr8_1:66143309-66143328 | None:intergenic | 25.0% |
| !!! | GATTTGTAGATTTGGAATTT+TGG | - | chr8_1:66143360-66143379 | Msa1208170:intron | 25.0% |
| ! | GCTAAAAATGTGGATATATT+AGG | - | chr8_1:66143681-66143700 | Msa1208170:CDS | 25.0% |
| ! | TTAAGTTTCATGCGTAAAAT+TGG | + | chr8_1:66143830-66143849 | None:intergenic | 25.0% |
| ! | TTTACGCATGAAACTTAAAT+AGG | - | chr8_1:66143832-66143851 | Msa1208170:CDS | 25.0% |
| ! | TTACGCATGAAACTTAAATA+GGG | - | chr8_1:66143833-66143852 | Msa1208170:CDS | 25.0% |
| ! | AAATAACTAAAGAACCAAAC+AGG | + | chr8_1:66143922-66143941 | None:intergenic | 25.0% |
| ! | ACAAAGAATATAATGTATCC+AGG | + | chr8_1:66144574-66144593 | None:intergenic | 25.0% |
| ! | TAATTCAATATCTATACCTC+TGG | + | chr8_1:66144623-66144642 | None:intergenic | 25.0% |
| !! | AGAGGTATAGATATTGAATT+AGG | - | chr8_1:66144622-66144641 | Msa1208170:intron | 25.0% |
| ! | GTAAATCTGATCATACAAAT+TGG | + | chr8_1:66144940-66144959 | None:intergenic | 25.0% |
| !!! | GGAGTTTTTGAAATCAAATT+AGG | - | chr8_1:66145186-66145205 | Msa1208170:CDS | 25.0% |
| ! | TTGAAATCAAATTAGGATAG+TGG | - | chr8_1:66145193-66145212 | Msa1208170:CDS | 25.0% |
| ! | TGAAATCAAATTAGGATAGT+GGG | - | chr8_1:66145194-66145213 | Msa1208170:CDS | 25.0% |
| ! | AGTGATTATTGAAGAAATGT+TGG | - | chr8_1:66145381-66145400 | Msa1208170:exon | 25.0% |
| ! | GTGATTATTGAAGAAATGTT+GGG | - | chr8_1:66145382-66145401 | Msa1208170:exon | 25.0% |
| ! | ACTTGTTTGCATTAATTGTT+TGG | + | chr8_1:66145454-66145473 | None:intergenic | 25.0% |
| ! | AGCTATAGACAAAAAAAATC+AGG | - | chr8_1:66145492-66145511 | Msa1208170:five_prime_UTR | 25.0% |
| !! | TTTTCTGTTCTAATCCTAAA+TGG | - | chr8_1:66145544-66145563 | Msa1208170:five_prime_UTR | 25.0% |
| AAACGCCAAAAGAAACTTAA+GGG | + | chr8_1:66142023-66142042 | None:intergenic | 30.0% | |
| AAAACGCCAAAAGAAACTTA+AGG | + | chr8_1:66142024-66142043 | None:intergenic | 30.0% | |
| ATAAGAGAGAAAAACACCAA+CGG | + | chr8_1:66142084-66142103 | None:intergenic | 30.0% | |
| ! | TCTTCATTTTCTTGTTCCTA+TGG | - | chr8_1:66142127-66142146 | Msa1208170:three_prime_UTR | 30.0% |
| ATCACTTTCTTTCTTGGATT+TGG | - | chr8_1:66142197-66142216 | Msa1208170:CDS | 30.0% | |
| TGTCATGTTTATTACATGAG+CGG | - | chr8_1:66142233-66142252 | Msa1208170:CDS | 30.0% | |
| TGTTAATTATGGTGTGTGAT+TGG | - | chr8_1:66142371-66142390 | Msa1208170:intron | 30.0% | |
| !! | GATTGGATTTTGGTGATTTT+AGG | - | chr8_1:66142388-66142407 | Msa1208170:intron | 30.0% |
| !! | TTGGATTTTGGTGATTTTAG+GGG | - | chr8_1:66142390-66142409 | Msa1208170:intron | 30.0% |
| AATTAAATTGGGCATGCATT+CGG | + | chr8_1:66142710-66142729 | None:intergenic | 30.0% | |
| ! | ATGCCCAATTTATCATGTTT+TGG | - | chr8_1:66142775-66142794 | Msa1208170:intron | 30.0% |
| ! | TGCCCAATTTATCATGTTTT+GGG | - | chr8_1:66142776-66142795 | Msa1208170:intron | 30.0% |
| CACCCAAAACATGATAAATT+GGG | + | chr8_1:66142781-66142800 | None:intergenic | 30.0% | |
| TCACCCAAAACATGATAAAT+TGG | + | chr8_1:66142782-66142801 | None:intergenic | 30.0% | |
| ATTCGTAAAACGTTAAGTAC+CGG | - | chr8_1:66142807-66142826 | Msa1208170:intron | 30.0% | |
| GTGTTATGTTCTATCTTATC+CGG | + | chr8_1:66142829-66142848 | None:intergenic | 30.0% | |
| !! | TGGGACAAAAAAGGTATTAA+GGG | + | chr8_1:66143011-66143030 | None:intergenic | 30.0% |
| !! | ATGGGACAAAAAAGGTATTA+AGG | + | chr8_1:66143012-66143031 | None:intergenic | 30.0% |
| GTACAAAATGTTGTCAAGTA+AGG | + | chr8_1:66143219-66143238 | None:intergenic | 30.0% | |
| ATAGAGGCAAAATATCGTTA+TGG | + | chr8_1:66143293-66143312 | None:intergenic | 30.0% | |
| ! | GTTGTTGTGATTTGTAGATT+TGG | - | chr8_1:66143352-66143371 | Msa1208170:intron | 30.0% |
| !! | ATTTGGAATTTTGGTGCAAA+AGG | - | chr8_1:66143369-66143388 | Msa1208170:intron | 30.0% |
| AACTTAGTCAGAGGAAAATA+AGG | + | chr8_1:66143477-66143496 | None:intergenic | 30.0% | |
| TAAAGAACTGAAACTCACAA+TGG | + | chr8_1:66143776-66143795 | None:intergenic | 30.0% | |
| ! | TTCAAGTTCTGGTAATAGTA+TGG | - | chr8_1:66143872-66143891 | Msa1208170:CDS | 30.0% |
| !!! | GCTAGATTAGTTTTTCATGT+TGG | - | chr8_1:66143894-66143913 | Msa1208170:CDS | 30.0% |
| ! | TTCAGCTATAACATCTGTTT+TGG | - | chr8_1:66143986-66144005 | Msa1208170:intron | 30.0% |
| AAACTATGAAAATCAACTGC+TGG | + | chr8_1:66144041-66144060 | None:intergenic | 30.0% | |
| GATGCAAAATTGAAATGTGA+AGG | - | chr8_1:66144102-66144121 | Msa1208170:intron | 30.0% | |
| GAATGCATTTGTAGTTTCTT+CGG | - | chr8_1:66144375-66144394 | Msa1208170:intron | 30.0% | |
| TTCAAACAGTCATTTACAGA+TGG | - | chr8_1:66144696-66144715 | Msa1208170:CDS | 30.0% | |
| ! | TAATTTTGCTTACACACTTC+TGG | - | chr8_1:66144763-66144782 | Msa1208170:CDS | 30.0% |
| !!! | TATGGAAGCGTGTATTTTTT+TGG | - | chr8_1:66145050-66145069 | Msa1208170:CDS | 30.0% |
| GATGATAACAATAGGTAGAA+CGG | + | chr8_1:66145078-66145097 | None:intergenic | 30.0% | |
| !! | GTTCGGCAGTTTTATATTTT+TGG | - | chr8_1:66145300-66145319 | Msa1208170:CDS | 30.0% |
| GTTAGAAACATCAATGTTGA+CGG | - | chr8_1:66145349-66145368 | Msa1208170:CDS | 30.0% | |
| TTAGAAACATCAATGTTGAC+GGG | - | chr8_1:66145350-66145369 | Msa1208170:CDS | 30.0% | |
| !!! | TAACGAAGTTTTGGAGAAGA+AGG | + | chr8_1:66141870-66141889 | None:intergenic | 35.0% |
| AAAGAAACTTAAGGGAATGG+TGG | + | chr8_1:66142015-66142034 | None:intergenic | 35.0% | |
| CCAAAAGAAACTTAAGGGAA+TGG | + | chr8_1:66142018-66142037 | None:intergenic | 35.0% | |
| ! | CCATTCCCTTAAGTTTCTTT+TGG | - | chr8_1:66142015-66142034 | Msa1208170:three_prime_UTR | 35.0% |
| TTTCTTGTTCCTATGGTTCT+TGG | - | chr8_1:66142134-66142153 | Msa1208170:three_prime_UTR | 35.0% | |
| GTAATTTATCGTCAGAGATG+TGG | - | chr8_1:66142170-66142189 | Msa1208170:CDS | 35.0% | |
| GGTATCATCACTTTCTTTCT+TGG | - | chr8_1:66142191-66142210 | Msa1208170:CDS | 35.0% | |
| ! | TATGGTGTGTGATTGGATTT+TGG | - | chr8_1:66142378-66142397 | Msa1208170:intron | 35.0% |
| !! | GATGGATTGTTGAAAGAAGA+AGG | - | chr8_1:66142463-66142482 | Msa1208170:intron | 35.0% |
| CCAACATACTCAATAACAGA+TGG | + | chr8_1:66142529-66142548 | None:intergenic | 35.0% | |
| CCATCTGTTATTGAGTATGT+TGG | - | chr8_1:66142526-66142545 | Msa1208170:CDS | 35.0% | |
| !!! | GTTGGTTTTTGTCTTTGTTG+TGG | - | chr8_1:66142544-66142563 | Msa1208170:CDS | 35.0% |
| !!! | TGGTCCTGTTTTTGAAATGA+AGG | - | chr8_1:66142579-66142598 | Msa1208170:CDS | 35.0% |
| GATTATCTTGATTGGACTGA+AGG | - | chr8_1:66142601-66142620 | Msa1208170:intron | 35.0% | |
| TAGACAAGACAAAACTGTAC+TGG | - | chr8_1:66142851-66142870 | Msa1208170:intron | 35.0% | |
| AAAACTGTACTGGAGAAAGA+TGG | - | chr8_1:66142861-66142880 | Msa1208170:intron | 35.0% | |
| AACTGATCATGGGACAAAAA+AGG | + | chr8_1:66143020-66143039 | None:intergenic | 35.0% | |
| TAAAAACCAAAGAACTCGAC+TGG | + | chr8_1:66143074-66143093 | None:intergenic | 35.0% | |
| AATGTGGATAGCAGGAAATA+TGG | - | chr8_1:66143145-66143164 | Msa1208170:intron | 35.0% | |
| ATGTGGATAGCAGGAAATAT+GGG | - | chr8_1:66143146-66143165 | Msa1208170:intron | 35.0% | |
| TTGTCAAGTAAGGACTATAG+TGG | + | chr8_1:66143209-66143228 | None:intergenic | 35.0% | |
| !!! | ACTTCAAGCTGGTTTTTGTA+TGG | - | chr8_1:66143431-66143450 | Msa1208170:intron | 35.0% |
| !!! | CTTCAAGCTGGTTTTTGTAT+GGG | - | chr8_1:66143432-66143451 | Msa1208170:intron | 35.0% |
| CCATTCATGATATGAAGGTT+CGG | + | chr8_1:66143502-66143521 | None:intergenic | 35.0% | |
| AAGCACCATTCATGATATGA+AGG | + | chr8_1:66143507-66143526 | None:intergenic | 35.0% | |
| GAAGCTTCTATTATCATCTC+TGG | - | chr8_1:66143603-66143622 | Msa1208170:CDS | 35.0% | |
| TTCTATTATCATCTCTGGCT+TGG | - | chr8_1:66143608-66143627 | Msa1208170:CDS | 35.0% | |
| ! | TCTATTATCATCTCTGGCTT+GGG | - | chr8_1:66143609-66143628 | Msa1208170:CDS | 35.0% |
| GTTTCAGTTCTTTACTTGCA+CGG | - | chr8_1:66143782-66143801 | Msa1208170:CDS | 35.0% | |
| !!! | ACTTGATGGTTTTCAAGTTC+TGG | - | chr8_1:66143861-66143880 | Msa1208170:CDS | 35.0% |
| ! | TTTTCATGTTGGTACCTGTT+TGG | - | chr8_1:66143905-66143924 | Msa1208170:CDS | 35.0% |
| TTGTTCCTACCCTTTAAACT+AGG | - | chr8_1:66144076-66144095 | Msa1208170:intron | 35.0% | |
| TGCATCTAGCCTAGTTTAAA+GGG | + | chr8_1:66144088-66144107 | None:intergenic | 35.0% | |
| TTGCATCTAGCCTAGTTTAA+AGG | + | chr8_1:66144089-66144108 | None:intergenic | 35.0% | |
| TTCTTCGGAAAAACCAACAA+AGG | - | chr8_1:66144390-66144409 | Msa1208170:intron | 35.0% | |
| ATGACTATCTGTTCCTTTGT+TGG | + | chr8_1:66144406-66144425 | None:intergenic | 35.0% | |
| ATCACTCTTGTGAATTGTGA+TGG | - | chr8_1:66144433-66144452 | Msa1208170:intron | 35.0% | |
| ! | GTTCTAAGTTATTCCTGTGT+TGG | - | chr8_1:66144785-66144804 | Msa1208170:CDS | 35.0% |
| TTTGTGTGCTGTGTTTGAAT+AGG | - | chr8_1:66144998-66145017 | Msa1208170:intron | 35.0% | |
| AAAATACACGCTTCCATATG+AGG | + | chr8_1:66145048-66145067 | None:intergenic | 35.0% | |
| CCAAGAAGGATGATAACAAT+AGG | + | chr8_1:66145086-66145105 | None:intergenic | 35.0% | |
| CCTATTGTTATCATCCTTCT+TGG | - | chr8_1:66145083-66145102 | Msa1208170:CDS | 35.0% | |
| AACAGTGCAGTTATTCTCTT+TGG | - | chr8_1:66145165-66145184 | Msa1208170:CDS | 35.0% | |
| !! | CTTTAGTCTTGGAAATGGTT+CGG | - | chr8_1:66145283-66145302 | Msa1208170:CDS | 35.0% |
| !! | CTGTGATTTTAGTGCTCTTT+TGG | - | chr8_1:66145419-66145438 | Msa1208170:five_prime_UTR | 35.0% |
| ACAACAAACTGTGACTGTGA+TGG | - | chr8_1:66141761-66141780 | Msa1208170:three_prime_UTR | 40.0% | |
| AATGACGTGATTACCCTTAC+CGG | + | chr8_1:66141787-66141806 | None:intergenic | 40.0% | |
| !! | TTCTTTTGGCGTTTTGTTCC+TGG | - | chr8_1:66142029-66142048 | Msa1208170:three_prime_UTR | 40.0% |
| GAAGCATAACCAAGAACCAT+AGG | + | chr8_1:66142146-66142165 | None:intergenic | 40.0% | |
| GGTTCTTGGTTATGCTTCTA+TGG | - | chr8_1:66142148-66142167 | Msa1208170:exon | 40.0% | |
| !! | GGTGATTTTAGGGGCTTTAA+TGG | - | chr8_1:66142399-66142418 | Msa1208170:intron | 40.0% |
| TTGATTGGACTGAAGGACAA+GGG | - | chr8_1:66142608-66142627 | Msa1208170:intron | 40.0% | |
| AGATGTCCCATGGTTTAGTA+AGG | - | chr8_1:66142959-66142978 | Msa1208170:intron | 40.0% | |
| GATGTCCCATGGTTTAGTAA+GGG | - | chr8_1:66142960-66142979 | Msa1208170:intron | 40.0% | |
| TGTTGTCAAATGTGGATAGC+AGG | - | chr8_1:66143137-66143156 | Msa1208170:intron | 40.0% | |
| TGTTTAGATTCCTCTATGCC+AGG | - | chr8_1:66143267-66143286 | Msa1208170:intron | 40.0% | |
| CCGAACCTTCATATCATGAA+TGG | - | chr8_1:66143499-66143518 | Msa1208170:intron | 40.0% | |
| CATATCATGAATGGTGCTTC+TGG | - | chr8_1:66143508-66143527 | Msa1208170:intron | 40.0% | |
| ! | ATGGTGCTTCTGGAAAAAGT+TGG | - | chr8_1:66143518-66143537 | Msa1208170:intron | 40.0% |
| ! | TGGTGCTTCTGGAAAAAGTT+GGG | - | chr8_1:66143519-66143538 | Msa1208170:intron | 40.0% |
| TTGGGTTACCAGTATATGTC+TGG | - | chr8_1:66143537-66143556 | Msa1208170:intron | 40.0% | |
| CTGTTAAGCCAGACATATAC+TGG | + | chr8_1:66143548-66143567 | None:intergenic | 40.0% | |
| TTGGGACAGAGCTAAAAATG+TGG | - | chr8_1:66143671-66143690 | Msa1208170:CDS | 40.0% | |
| ACTTGAATATTCCACACAGC+TGG | + | chr8_1:66143738-66143757 | None:intergenic | 40.0% | |
| TAAATAGGGTGCAGACTTGA+TGG | - | chr8_1:66143847-66143866 | Msa1208170:CDS | 40.0% | |
| CTATGAAAATCAACTGCTGG+TGG | + | chr8_1:66144038-66144057 | None:intergenic | 40.0% | |
| TCTAGCCTAGTTTAAAGGGT+AGG | + | chr8_1:66144084-66144103 | None:intergenic | 40.0% | |
| TATGATAGGCTTATCCAGAG+TGG | - | chr8_1:66144182-66144201 | Msa1208170:intron | 40.0% | |
| ATGATAGGCTTATCCAGAGT+GGG | - | chr8_1:66144183-66144202 | Msa1208170:intron | 40.0% | |
| GCAAGTAACTGAAGAAATCC+TGG | + | chr8_1:66144215-66144234 | None:intergenic | 40.0% | |
| CACATGCCAAATAGCACTAA+CGG | + | chr8_1:66144246-66144265 | None:intergenic | 40.0% | |
| TTATTTCAGGGGTTGTATCC+TGG | - | chr8_1:66144553-66144572 | Msa1208170:intron | 40.0% | |
| !! | CAGTTAATTAACTTGCGCTG+CGG | - | chr8_1:66144665-66144684 | Msa1208170:intron | 40.0% |
| !! | AGGGCATTTTTAACTGTTGG+AGG | + | chr8_1:66144734-66144753 | None:intergenic | 40.0% |
| TCCAACAGTTAAAAATGCCC+TGG | - | chr8_1:66144733-66144752 | Msa1208170:CDS | 40.0% | |
| !! | ACCAGGGCATTTTTAACTGT+TGG | + | chr8_1:66144737-66144756 | None:intergenic | 40.0% |
| AGCAAAATTAGCGAACACCA+GGG | + | chr8_1:66144753-66144772 | None:intergenic | 40.0% | |
| AAGCAAAATTAGCGAACACC+AGG | + | chr8_1:66144754-66144773 | None:intergenic | 40.0% | |
| !! | TTATTCCTGTGTTGGCTTCA+TGG | - | chr8_1:66144793-66144812 | Msa1208170:CDS | 40.0% |
| TGTGAATGTGTTTGTGTGAG+TGG | + | chr8_1:66144910-66144929 | None:intergenic | 40.0% | |
| CATGAAACTCTTGCCTCATA+TGG | - | chr8_1:66145032-66145051 | Msa1208170:CDS | 40.0% | |
| GCTTGATCACTTTACCAAGA+AGG | + | chr8_1:66145100-66145119 | None:intergenic | 40.0% | |
| ! | TTCCTTTTGAGCTTTCGATC+TGG | + | chr8_1:66145135-66145154 | None:intergenic | 40.0% |
| AAAGCTCAAAAGGAAGAGTG+AGG | - | chr8_1:66145140-66145159 | Msa1208170:CDS | 40.0% | |
| !! | TCAAATTAGGATAGTGGGAG+AGG | - | chr8_1:66145199-66145218 | Msa1208170:CDS | 40.0% |
| TGTAACAGCTCCTTTAGTCT+TGG | - | chr8_1:66145272-66145291 | Msa1208170:CDS | 40.0% | |
| !! | AGCTCCTTTAGTCTTGGAAA+TGG | - | chr8_1:66145278-66145297 | Msa1208170:CDS | 40.0% |
| CGAACCATTTCCAAGACTAA+AGG | + | chr8_1:66145285-66145304 | None:intergenic | 40.0% | |
| !! | GGAATCAAGTTGAAGCTCCA+TGG | + | chr8_1:66141934-66141953 | None:intergenic | 45.0% |
| GGAGCTTCAACTTGATTCCA+TGG | - | chr8_1:66141935-66141954 | Msa1208170:three_prime_UTR | 45.0% | |
| GACGGAAACACCAATTGAAG+CGG | + | chr8_1:66141961-66141980 | None:intergenic | 45.0% | |
| AAGTGTTTAGGAAGACGACC+AGG | + | chr8_1:66142050-66142069 | None:intergenic | 45.0% | |
| AGAGAGAAAAACACCAACGG+CGG | + | chr8_1:66142081-66142100 | None:intergenic | 45.0% | |
| ATTACATGAGCGGTGATGCT+TGG | - | chr8_1:66142243-66142262 | Msa1208170:CDS | 45.0% | |
| ACTGGTAGTCTCTACTCTGA+AGG | - | chr8_1:66142287-66142306 | Msa1208170:intron | 45.0% | |
| ! | TGTTGTGGAAGTCACTTTGC+TGG | - | chr8_1:66142559-66142578 | Msa1208170:CDS | 45.0% |
| CTTGATTGGACTGAAGGACA+AGG | - | chr8_1:66142607-66142626 | Msa1208170:intron | 45.0% | |
| TGATTGGACTGAAGGACAAG+GGG | - | chr8_1:66142609-66142628 | Msa1208170:intron | 45.0% | |
| CTGTACTGGAGAAAGATGGA+AGG | - | chr8_1:66142865-66142884 | Msa1208170:intron | 45.0% | |
| CTAGATCGAAAGATGTCCCA+TGG | - | chr8_1:66142949-66142968 | Msa1208170:intron | 45.0% | |
| CGTGTCCCTTACTAAACCAT+GGG | + | chr8_1:66142968-66142987 | None:intergenic | 45.0% | |
| TCGTGTCCCTTACTAAACCA+TGG | + | chr8_1:66142969-66142988 | None:intergenic | 45.0% | |
| AGTTGTCCAGTCGAGTTCTT+TGG | - | chr8_1:66143065-66143084 | Msa1208170:CDS | 45.0% | |
| GCTATGCAACAGTGCTATAG+CGG | - | chr8_1:66143183-66143202 | Msa1208170:intron | 45.0% | |
| GGCAAAATATCGTTATGGCC+TGG | + | chr8_1:66143288-66143307 | None:intergenic | 45.0% | |
| GGACCAAAACCATCACCATA+TGG | - | chr8_1:66143390-66143409 | Msa1208170:intron | 45.0% | |
| !!! | GCACCATATGGTGATGGTTT+TGG | + | chr8_1:66143396-66143415 | None:intergenic | 45.0% |
| AGTGTTGCACCATATGGTGA+TGG | + | chr8_1:66143402-66143421 | None:intergenic | 45.0% | |
| TCAGAGGAAAATAAGGCACG+AGG | + | chr8_1:66143470-66143489 | None:intergenic | 45.0% | |
| ! | GGTTCGGTAAACTTAGTCAG+AGG | + | chr8_1:66143486-66143505 | None:intergenic | 45.0% |
| !!! | TTTTTAGCTCTGTCCCAACG+CGG | + | chr8_1:66143669-66143688 | None:intergenic | 45.0% |
| CAGTTGTAATTCCAGCTGTG+TGG | - | chr8_1:66143724-66143743 | Msa1208170:CDS | 45.0% | |
| GGAATATTCAAGTCAGCACC+TGG | - | chr8_1:66143745-66143764 | Msa1208170:CDS | 45.0% | |
| AATAGCACTAACGGTCTGTG+TGG | + | chr8_1:66144237-66144256 | None:intergenic | 45.0% | |
| ! | CACAGACCGTTAGTGCTATT+TGG | - | chr8_1:66144237-66144256 | Msa1208170:intron | 45.0% |
| TACCACGAAACAACTTTGCC+AGG | - | chr8_1:66144478-66144497 | Msa1208170:intron | 45.0% | |
| AACGGTACAAAATAGCAGCC+TGG | + | chr8_1:66144499-66144518 | None:intergenic | 45.0% | |
| !! | CAGTCAGCATTGATGATTGC+TGG | - | chr8_1:66144595-66144614 | Msa1208170:intron | 45.0% |
| !! | TTGATGATTGCTGGTTCCAG+AGG | - | chr8_1:66144604-66144623 | Msa1208170:intron | 45.0% |
| GTCATTTACAGATGGCAGCA+AGG | - | chr8_1:66144704-66144723 | Msa1208170:CDS | 45.0% | |
| ACAAACCATGAAGCCAACAC+AGG | + | chr8_1:66144801-66144820 | None:intergenic | 45.0% | |
| CTTGGTAAAGTGATCAAGCC+TGG | - | chr8_1:66145101-66145120 | Msa1208170:CDS | 45.0% | |
| GTAAAGTGATCAAGCCTGGA+AGG | - | chr8_1:66145105-66145124 | Msa1208170:CDS | 45.0% | |
| ! | TTTTGAGCTTTCGATCTGGC+AGG | + | chr8_1:66145131-66145150 | None:intergenic | 45.0% |
| TGCCAGATCGAAAGCTCAAA+AGG | - | chr8_1:66145130-66145149 | Msa1208170:CDS | 45.0% | |
| !!! | TTTTATATATTTTATTATTG+AGG | - | chr8_1:66142343-66142362 | Msa1208170:intron | 5.0% |
| !!! | TTTATATATTTTATTATTGA+GGG | - | chr8_1:66142344-66142363 | Msa1208170:intron | 5.0% |
| CAAACTGTGACTGTGATGGC+CGG | - | chr8_1:66141765-66141784 | Msa1208170:three_prime_UTR | 50.0% | |
| !! | TCAAGTTGAAGCTCCATGGC+TGG | + | chr8_1:66141930-66141949 | None:intergenic | 50.0% |
| GATTCCATGGCCGCTTCAAT+TGG | - | chr8_1:66141948-66141967 | Msa1208170:three_prime_UTR | 50.0% | |
| AACACCAATTGAAGCGGCCA+TGG | + | chr8_1:66141955-66141974 | None:intergenic | 50.0% | |
| AGCGGTGATGCTTGGAAAGA+AGG | - | chr8_1:66142251-66142270 | Msa1208170:CDS | 50.0% | |
| GGTGATGCTTGGAAAGAAGG+TGG | - | chr8_1:66142254-66142273 | Msa1208170:CDS | 50.0% | |
| GAAGGTGGAATCGATGCAAC+TGG | - | chr8_1:66142269-66142288 | Msa1208170:CDS | 50.0% | |
| ATCGTTATGGCCTGGCATAG+AGG | + | chr8_1:66143280-66143299 | None:intergenic | 50.0% | |
| !! | GCTCGAAGTGTTGCACCATA+TGG | + | chr8_1:66143408-66143427 | None:intergenic | 50.0% |
| CTTCGAGCTCTACTTCAAGC+TGG | - | chr8_1:66143420-66143439 | Msa1208170:intron | 50.0% | |
| ! | TGTCTGGCTTAACAGCACGT+TGG | - | chr8_1:66143553-66143572 | Msa1208170:CDS | 50.0% |
| !! | ATCTCTGGCTTGGGTTTCAG+TGG | - | chr8_1:66143618-66143637 | Msa1208170:CDS | 50.0% |
| AAACTCACAATGGCGAAGCC+AGG | + | chr8_1:66143766-66143785 | None:intergenic | 50.0% | |
| ! | AGCCTGGCAAAGTTGTTTCG+TGG | + | chr8_1:66144483-66144502 | None:intergenic | 50.0% |
| !! | ATTAGGATAGTGGGAGAGGC+TGG | - | chr8_1:66145203-66145222 | Msa1208170:CDS | 50.0% |
| GGCTGGATCTTCAGTTTCCA+CGG | - | chr8_1:66145224-66145243 | Msa1208170:CDS | 50.0% | |
| GCTGGATCTTCAGTTTCCAC+GGG | - | chr8_1:66145225-66145244 | Msa1208170:CDS | 50.0% | |
| CTGGATCTTCAGTTTCCACG+GGG | - | chr8_1:66145226-66145245 | Msa1208170:CDS | 50.0% | |
| TGTGACTGTGATGGCCGGTA+AGG | - | chr8_1:66141770-66141789 | Msa1208170:three_prime_UTR | 55.0% | |
| GTGACTGTGATGGCCGGTAA+GGG | - | chr8_1:66141771-66141790 | Msa1208170:three_prime_UTR | 55.0% | |
| GCAGAGAAGGAAGCGGAGAA+CGG | + | chr8_1:66141985-66142004 | None:intergenic | 55.0% | |
| CGACGAAGCAGAGAAGGAAG+CGG | + | chr8_1:66141992-66142011 | None:intergenic | 55.0% | |
| !! | GCGGCGGAGTAGAAGTGTTT+AGG | + | chr8_1:66142062-66142081 | None:intergenic | 55.0% |
| GAGAAAAACACCAACGGCGG+CGG | + | chr8_1:66142078-66142097 | None:intergenic | 55.0% | |
| ATCCAGAGTGGGAAGAAGCC+AGG | - | chr8_1:66144194-66144213 | Msa1208170:intron | 55.0% | |
| ATCCTGGCTTCTTCCCACTC+TGG | + | chr8_1:66144199-66144218 | None:intergenic | 55.0% | |
| AAAACCAGAGCTGAACCCCG+TGG | + | chr8_1:66145244-66145263 | None:intergenic | 55.0% | |
| GGCTCGTTGTGCTGTGTGGT+TGG | + | chr8_1:66141909-66141928 | None:intergenic | 60.0% | |
| ACAGCACAACGAGCCAGCCA+TGG | - | chr8_1:66141914-66141933 | Msa1208170:three_prime_UTR | 60.0% | |
| AAGGAAGCGGAGAACGGCGA+CGG | + | chr8_1:66141979-66141998 | None:intergenic | 60.0% | |
| ! | TGGTGGCGACGAAGCAGAGA+AGG | + | chr8_1:66141998-66142017 | None:intergenic | 60.0% |
| !! | CTGGCTTGGGTTTCAGTGGC+TGG | - | chr8_1:66143622-66143641 | Msa1208170:CDS | 60.0% |
| CTCTCCACCAAAGCCGCGTT+GGG | - | chr8_1:66143653-66143672 | Msa1208170:CDS | 60.0% | |
| TTCGATCTGGCAGGCCTTCC+AGG | + | chr8_1:66145122-66145141 | None:intergenic | 60.0% | |
| GTTTCCACGGGGTTCAGCTC+TGG | - | chr8_1:66145237-66145256 | Msa1208170:CDS | 60.0% | |
| !! | GGCTGGCTCGTTGTGCTGTG+TGG | + | chr8_1:66141913-66141932 | None:intergenic | 65.0% |
| CACTTCTACTCCGCCGCCGT+TGG | - | chr8_1:66142065-66142084 | Msa1208170:three_prime_UTR | 65.0% | |
| ! | CCAACGCGGCTTTGGTGGAG+AGG | + | chr8_1:66143655-66143674 | None:intergenic | 65.0% |
| CCTCTCCACCAAAGCCGCGT+TGG | - | chr8_1:66143652-66143671 | Msa1208170:CDS | 65.0% | |
| ! | CTGTCCCAACGCGGCTTTGG+TGG | + | chr8_1:66143660-66143679 | None:intergenic | 65.0% |
| GCTCTGTCCCAACGCGGCTT+TGG | + | chr8_1:66143663-66143682 | None:intergenic | 65.0% | |
| !! | GGATAGTGGGAGAGGCTGGC+TGG | - | chr8_1:66145207-66145226 | Msa1208170:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 66141743 | 66145576 | 66141743 | ID=Msa1208170;Name=Msa1208170 |
| chr8_1 | mRNA | 66141743 | 66145576 | 66141743 | ID=Msa1208170-mRNA-1;Parent=Msa1208170;Name=Msa1208170-mRNA-1;_AED=0.01;_eAED=0.01;_QI=190|1|1|1|1|1|7|416|462 |
| chr8_1 | exon | 66141743 | 66142299 | 66141743 | ID=Msa1208170-mRNA-1:exon:21755;Parent=Msa1208170-mRNA-1 |
| chr8_1 | exon | 66142505 | 66142614 | 66142505 | ID=Msa1208170-mRNA-1:exon:21754;Parent=Msa1208170-mRNA-1 |
| chr8_1 | exon | 66142694 | 66142757 | 66142694 | ID=Msa1208170-mRNA-1:exon:21753;Parent=Msa1208170-mRNA-1 |
| chr8_1 | exon | 66143057 | 66143142 | 66143057 | ID=Msa1208170-mRNA-1:exon:21752;Parent=Msa1208170-mRNA-1 |
| chr8_1 | exon | 66143542 | 66143950 | 66143542 | ID=Msa1208170-mRNA-1:exon:21751;Parent=Msa1208170-mRNA-1 |
| chr8_1 | exon | 66144689 | 66144909 | 66144689 | ID=Msa1208170-mRNA-1:exon:21750;Parent=Msa1208170-mRNA-1 |
| chr8_1 | exon | 66145029 | 66145576 | 66145029 | ID=Msa1208170-mRNA-1:exon:21749;Parent=Msa1208170-mRNA-1 |
| chr8_1 | five_prime_UTR | 66145387 | 66145576 | 66145387 | ID=Msa1208170-mRNA-1:five_prime_utr;Parent=Msa1208170-mRNA-1 |
| chr8_1 | CDS | 66145029 | 66145386 | 66145029 | ID=Msa1208170-mRNA-1:cds;Parent=Msa1208170-mRNA-1 |
| chr8_1 | CDS | 66144689 | 66144909 | 66144689 | ID=Msa1208170-mRNA-1:cds;Parent=Msa1208170-mRNA-1 |
| chr8_1 | CDS | 66143542 | 66143950 | 66143542 | ID=Msa1208170-mRNA-1:cds;Parent=Msa1208170-mRNA-1 |
| chr8_1 | CDS | 66143057 | 66143142 | 66143057 | ID=Msa1208170-mRNA-1:cds;Parent=Msa1208170-mRNA-1 |
| chr8_1 | CDS | 66142694 | 66142757 | 66142694 | ID=Msa1208170-mRNA-1:cds;Parent=Msa1208170-mRNA-1 |
| chr8_1 | CDS | 66142505 | 66142614 | 66142505 | ID=Msa1208170-mRNA-1:cds;Parent=Msa1208170-mRNA-1 |
| chr8_1 | CDS | 66142159 | 66142299 | 66142159 | ID=Msa1208170-mRNA-1:cds;Parent=Msa1208170-mRNA-1 |
| chr8_1 | three_prime_UTR | 66141743 | 66142158 | 66141743 | ID=Msa1208170-mRNA-1:three_prime_utr;Parent=Msa1208170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
