AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1303900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1303900 MtrunA17_Chr4g0070231 98.025 405 7 1 1 405 1 404 0.0 831
Msa1303900 MtrunA17_Chr8g0344491 72.319 401 95 5 16 405 32 427 0.0 575
Msa1303900 MtrunA17_Chr3g0139111 59.322 413 143 5 18 405 28 440 1.17e-177 502
Msa1303900 MtrunA17_Chr4g0074711 28.099 363 214 9 27 359 54 399 7.92e-38 141
Msa1303900 MtrunA17_Chr2g0288251 31.353 303 179 7 46 337 59 343 1.76e-37 140
Msa1303900 MtrunA17_Chr2g0328791 31.922 307 190 8 46 339 14 314 6.26e-36 136
Msa1303900 MtrunA17_Chr4g0045221 30.640 297 188 8 46 328 115 407 9.48e-36 136
Msa1303900 MtrunA17_Chr1g0153871 29.553 291 177 7 47 328 97 368 7.54e-35 133
Msa1303900 MtrunA17_Chr1g0153871 27.660 188 110 4 40 207 183 364 1.18e-14 75.5
Msa1303900 MtrunA17_Chr3g0133651 29.766 299 181 7 40 328 86 365 7.66e-34 130
Msa1303900 MtrunA17_Chr3g0133651 25.269 186 113 4 48 213 188 367 6.74e-11 63.5
Msa1303900 MtrunA17_Chr3g0110211 33.166 199 125 4 48 241 26 221 1.68e-30 120
Msa1303900 MtrunA17_Chr3g0110211 24.623 199 109 4 135 327 28 191 2.41e-13 70.9
Msa1303900 MtrunA17_Chr1g0153181 26.333 300 191 8 39 327 112 392 7.39e-22 97.8
Msa1303900 MtrunA17_Chr1g0153181 25.321 312 186 8 11 313 1 274 2.45e-21 96.3
Msa1303900 MtrunA17_Chr3g0134141 27.863 262 147 7 45 297 22 250 1.33e-21 97.1
Msa1303900 MtrunA17_Chr3g0134141 27.273 308 191 9 32 327 97 383 1.53e-17 84.7
Msa1303900 MtrunA17_Chr6g0466501 26.199 271 158 6 48 311 26 261 1.50e-21 97.1
Msa1303900 MtrunA17_Chr6g0466501 23.630 292 187 7 48 327 114 381 4.95e-15 77.0
Msa1303900 MtrunA17_Chr6g0465751 25.830 271 159 6 48 311 26 261 1.88e-21 96.7
Msa1303900 MtrunA17_Chr6g0465751 23.630 292 187 7 48 327 114 381 6.81e-15 76.6
Msa1303900 MtrunA17_Chr4g0044541 25.733 307 197 8 32 327 107 393 3.77e-21 95.9
Msa1303900 MtrunA17_Chr4g0044541 25.714 280 166 7 48 318 35 281 1.48e-20 94.0
Msa1303900 MtrunA17_Chr7g0265341 24.606 317 182 8 20 327 58 326 7.64e-21 94.7
Msa1303900 MtrunA17_Chr7g0265341 25.667 300 192 7 39 327 150 429 1.74e-19 90.9
Msa1303900 MtrunA17_Chr3g0116631 33.140 172 103 2 49 208 111 282 7.71e-20 89.0
Msa1303900 MtrunA17_Chr6g0465631 26.333 300 176 9 39 320 7 279 1.18e-18 87.8
Msa1303900 MtrunA17_Chr6g0466451 26.333 300 176 9 39 320 7 279 1.26e-18 87.8
Msa1303900 MtrunA17_Chr1g0179701 25.256 293 180 8 48 327 151 417 1.89e-18 87.4
Msa1303900 MtrunA17_Chr1g0179701 24.549 277 166 8 48 314 63 306 9.70e-18 85.1
Msa1303900 MtrunA17_Chr1g0201151 26.007 273 160 8 48 311 31 270 1.33e-17 85.1
Msa1303900 MtrunA17_Chr1g0201151 23.934 305 192 7 32 320 103 383 3.48e-16 80.5
Msa1303900 MtrunA17_Chr4g0058151 32.353 170 104 3 49 208 124 292 1.86e-17 82.4
Msa1303900 MtrunA17_Chr3g0087481 29.834 181 113 2 42 208 55 235 1.45e-16 78.6
Msa1303900 MtrunA17_Chr3g0087481 28.866 194 112 3 134 323 62 233 2.31e-15 75.1
Msa1303900 MtrunA17_Chr0c09g0493511 23.630 292 187 7 48 327 32 299 2.03e-16 81.3
Msa1303900 MtrunA17_Chr6g0465691 23.630 292 187 7 48 327 32 299 4.43e-15 77.0
Msa1303900 MtrunA17_Chr1g0181111 28.877 187 106 2 49 208 86 272 1.34e-14 73.6
Msa1303900 MtrunA17_Chr4g0061451 42.857 77 44 0 134 210 44 120 2.38e-14 72.8
Msa1303900 MtrunA17_Chr7g0219021 40.506 79 47 0 134 212 42 120 4.16e-14 71.6
Msa1303900 MtrunA17_Chr1g0177101 25.000 192 130 3 32 209 93 284 5.82e-14 72.4
Msa1303900 MtrunA17_Chr3g0121631 44.000 75 41 1 134 208 38 111 2.78e-13 67.0
Msa1303900 MtrunA17_Chr7g0267571 25.714 210 123 6 133 331 110 297 3.73e-13 70.1
Msa1303900 MtrunA17_Chr7g0267571 24.651 215 136 4 49 245 111 317 2.35e-12 67.4
Msa1303900 MtrunA17_Chr3g0119311 41.333 75 44 0 134 208 38 112 3.79e-13 66.2
Msa1303900 MtrunA17_Chr1g0190211 37.838 74 46 0 132 205 132 205 5.40e-13 68.2
Msa1303900 MtrunA17_Chr7g0266751 38.961 77 47 0 132 208 32 108 1.01e-12 65.1
Msa1303900 MtrunA17_Chr4g0033701 25.260 289 184 9 42 319 21 288 1.85e-12 69.3
Msa1303900 MtrunA17_Chr3g0086861 40.260 77 46 0 134 210 46 122 7.14e-12 66.6
Msa1303900 MtrunA17_Chr1g0186351 26.562 192 112 5 49 213 8 197 1.31e-11 66.2
Msa1303900 MtrunA17_Chr1g0168601 30.631 111 75 1 100 208 119 229 1.88e-11 63.5
Msa1303900 MtrunA17_Chr4g0035001 38.462 78 48 0 131 208 5 82 2.62e-11 61.6
Msa1303900 MtrunA17_Chr5g0447761 27.830 212 122 8 134 338 8 195 4.10e-11 64.7
Msa1303900 MtrunA17_Chr5g0447761 26.705 176 106 5 44 198 3 176 4.25e-11 64.3
Msa1303900 MtrunA17_Chr4g0035051 35.443 79 51 0 132 210 8 86 5.04e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1303900 AT1G17370.1 69.900 402 103 6 16 405 24 419 0.0 550
Msa1303900 AT3G14100.1 69.154 402 109 5 16 405 29 427 0.0 549
Msa1303900 AT1G17370.2 69.403 402 102 7 16 405 24 416 0.0 541
Msa1303900 AT1G54080.1 65.672 402 129 5 11 405 27 426 0.0 533
Msa1303900 AT1G54080.2 65.025 406 129 6 11 405 27 430 0.0 528
Msa1303900 AT5G19350.1 31.111 315 203 8 22 328 2 310 1.03e-38 144
Msa1303900 AT5G19350.2 30.476 315 201 8 22 328 2 306 2.12e-37 140
Msa1303900 AT4G27000.1 31.164 292 173 7 47 329 80 352 1.35e-36 138
Msa1303900 AT1G11650.2 29.154 319 190 8 20 329 44 335 8.25e-35 133
Msa1303900 AT3G19130.1 29.252 294 193 7 46 329 107 395 1.13e-34 133
Msa1303900 AT5G54900.1 29.836 305 185 9 35 329 49 334 1.41e-34 132
Msa1303900 AT1G49600.3 29.932 294 184 9 46 328 118 400 2.18e-32 127
Msa1303900 AT1G49600.2 29.932 294 184 9 46 328 118 400 2.18e-32 127
Msa1303900 AT1G49600.1 29.831 295 185 9 46 329 118 401 2.69e-32 127
Msa1303900 AT1G47490.1 30.612 294 175 9 47 328 101 377 1.01e-30 122
Msa1303900 AT1G47490.1 25.532 188 112 4 48 213 198 379 1.33e-11 66.2
Msa1303900 AT1G11650.1 28.819 288 169 8 20 298 44 304 8.55e-30 117
Msa1303900 AT2G18510.1 33.166 199 125 4 48 241 26 221 1.42e-28 115
Msa1303900 AT1G47500.1 30.272 294 176 10 47 328 103 379 3.58e-28 115
Msa1303900 AT1G47500.1 26.064 188 111 4 48 213 200 381 8.55e-12 67.0
Msa1303900 AT3G16380.1 28.114 281 175 6 48 320 113 374 1.26e-24 106
Msa1303900 AT3G16380.1 26.871 294 159 10 48 321 22 279 1.26e-17 85.1
Msa1303900 AT2G23350.1 29.210 291 175 8 48 327 135 405 3.48e-24 105
Msa1303900 AT2G23350.1 26.182 275 161 7 48 313 47 288 4.44e-18 87.0
Msa1303900 AT2G23350.1 25.668 187 120 4 42 210 220 405 3.58e-13 71.6
Msa1303900 AT1G49760.1 27.907 301 184 9 39 327 125 404 3.66e-24 105
Msa1303900 AT1G49760.1 26.909 275 159 7 48 313 46 287 4.70e-20 92.8
Msa1303900 AT1G49760.2 27.907 301 184 9 39 327 125 404 3.66e-24 105
Msa1303900 AT1G49760.2 26.909 275 159 7 48 313 46 287 4.70e-20 92.8
Msa1303900 AT1G71770.1 27.574 272 158 7 48 311 60 300 2.50e-23 102
Msa1303900 AT1G71770.1 27.893 337 199 10 32 343 131 448 1.29e-20 94.7
Msa1303900 AT1G71770.2 27.574 272 158 7 48 311 60 300 2.50e-23 102
Msa1303900 AT1G71770.2 27.893 337 199 10 32 343 131 448 1.29e-20 94.7
Msa1303900 AT4G34110.1 26.333 300 190 7 39 327 116 395 5.25e-23 101
Msa1303900 AT4G34110.1 27.839 273 155 7 48 311 37 276 3.78e-21 96.3
Msa1303900 AT1G34140.1 28.169 284 181 6 48 325 32 298 9.63e-23 99.8
Msa1303900 AT1G22760.1 26.471 272 161 7 48 311 50 290 1.10e-22 100
Msa1303900 AT1G22760.1 25.962 312 192 6 32 327 121 409 3.11e-18 87.4
Msa1303900 AT1G47490.2 33.714 175 104 6 47 209 101 275 3.05e-22 96.7
Msa1303900 AT4G24770.1 33.333 171 105 2 49 210 152 322 3.91e-21 94.0
Msa1303900 AT4G24770.2 33.333 171 105 2 49 210 152 322 3.91e-21 94.0
Msa1303900 AT1G47500.2 33.714 175 104 6 47 209 103 277 1.43e-20 92.0
Msa1303900 AT5G50250.1 34.503 171 103 2 49 210 115 285 1.66e-20 91.3
Msa1303900 AT2G36660.1 25.260 289 187 7 48 327 113 381 1.14e-18 88.6
Msa1303900 AT2G36660.1 24.176 273 163 6 48 311 25 262 1.74e-17 85.1
Msa1303900 AT2G36660.1 25.214 234 144 6 48 262 202 423 1.84e-11 66.2
Msa1303900 AT2G37220.1 31.383 188 101 3 49 208 93 280 1.60e-18 85.5
Msa1303900 AT3G52150.2 29.630 189 115 4 38 208 65 253 3.38e-16 78.2
Msa1303900 AT3G52150.2 29.231 195 114 6 133 323 77 251 2.40e-14 72.8
Msa1303900 AT3G52150.1 29.630 189 115 4 38 208 65 253 3.38e-16 78.2
Msa1303900 AT3G52150.1 29.231 195 114 6 133 323 77 251 2.40e-14 72.8
Msa1303900 AT1G60000.1 30.208 192 116 4 22 208 75 253 3.58e-16 78.2
Msa1303900 AT3G23830.2 46.154 78 42 0 133 210 36 113 8.45e-16 74.3
Msa1303900 AT3G23830.1 46.154 78 42 0 133 210 36 113 8.45e-16 74.3
Msa1303900 AT4G13860.1 45.714 70 38 0 134 203 5 74 3.85e-15 70.9
Msa1303900 AT4G13850.3 45.205 73 40 0 134 206 37 109 1.47e-14 70.9
Msa1303900 AT4G13850.2 45.205 73 40 0 134 206 37 109 1.81e-14 70.9
Msa1303900 AT4G13850.1 45.205 73 40 0 134 206 37 109 2.03e-14 70.9
Msa1303900 AT4G13850.4 45.333 75 41 0 134 208 37 111 2.50e-14 69.7
Msa1303900 AT3G52380.1 26.111 180 115 3 49 210 118 297 5.29e-14 73.2
Msa1303900 AT5G04280.1 41.111 90 52 1 133 221 8 97 2.74e-13 70.5
Msa1303900 AT2G33410.1 30.857 175 94 5 49 198 8 180 9.89e-13 69.7
Msa1303900 AT3G53460.1 44.737 76 42 0 133 208 258 333 1.07e-12 69.3
Msa1303900 AT3G53460.3 44.737 76 42 0 133 208 258 333 1.07e-12 69.3
Msa1303900 AT3G53460.2 44.737 76 42 0 133 208 258 333 1.07e-12 69.3
Msa1303900 AT3G04500.1 32.632 95 61 1 132 223 137 231 1.10e-12 67.8
Msa1303900 AT3G53460.4 44.737 76 42 0 133 208 279 354 1.45e-12 68.9
Msa1303900 AT1G74230.1 44.156 77 42 1 134 210 36 111 2.44e-12 67.4
Msa1303900 AT5G61030.2 39.474 76 46 0 133 208 41 116 3.26e-12 67.4
Msa1303900 AT5G61030.1 39.474 76 46 0 133 208 41 116 3.26e-12 67.4
Msa1303900 AT4G39260.3 36.047 86 54 1 132 216 6 91 3.34e-12 62.8
Msa1303900 AT2G43410.4 24.870 193 110 7 46 209 94 280 4.83e-12 68.6
Msa1303900 AT2G43410.3 24.870 193 110 7 46 209 94 280 4.83e-12 68.6
Msa1303900 AT2G43410.2 24.870 193 110 7 46 209 94 280 4.83e-12 68.6
Msa1303900 AT4G39260.2 37.662 77 48 0 132 208 6 82 5.91e-12 63.2
Msa1303900 AT3G08000.1 37.662 77 48 0 134 210 43 119 1.40e-11 62.4
Msa1303900 AT4G39260.1 36.842 76 48 0 131 206 5 80 4.23e-11 61.6
Msa1303900 AT2G21660.2 36.842 76 48 0 131 206 7 82 4.37e-11 61.6
Msa1303900 AT4G14300.1 28.000 175 99 5 49 198 8 180 4.63e-11 64.7
Msa1303900 AT4G14300.2 28.000 175 99 5 49 198 8 180 4.63e-11 64.7
Msa1303900 AT2G21660.1 36.842 76 48 0 131 206 7 82 6.07e-11 61.6
Msa1303900 AT5G47320.1 40.000 75 45 0 134 208 33 107 8.77e-11 61.6

Find 172 sgRNAs with CRISPR-Local

Find 371 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTACCAGTTAAATCGTTTA+TGG 0.111838 8_3:-67210789 None:intergenic
TGTATTACTACATTTAAATA+AGG 0.191590 8_3:+67213134 Msa1303900:three_prime_UTR
TTTCTGATACTTCAGGTAAA+TGG 0.225225 8_3:+67211309 Msa1303900:intron
GTGGCAACATCTTCAGTTCT+AGG 0.231542 8_3:-67208342 None:intergenic
GTGTAAGCTCTTTGTGAATA+AGG 0.248325 8_3:+67213273 Msa1303900:three_prime_UTR
GCCATGGGAATGGGTGCTCT+TGG 0.248648 8_3:+67212879 Msa1303900:CDS
CCATGGGAATGGGTGCTCTT+GGG 0.253064 8_3:+67212880 Msa1303900:CDS
GGCAGTCTATCAAAGTTAAC+TGG 0.257739 8_3:+67210214 Msa1303900:CDS
TGAGCCAGGATTTAGGTATT+TGG 0.260360 8_3:+67213234 Msa1303900:three_prime_UTR
GTGCTCTTGGGGCTGGGTAC+GGG 0.261923 8_3:+67212892 Msa1303900:CDS
TCCCATGGCTGCCCGCTTTA+CGG 0.262872 8_3:-67212865 None:intergenic
GGAATGGGTGCTCTTGGGGC+TGG 0.265291 8_3:+67212885 Msa1303900:CDS
AGTTAACTCCACAACACTTT+TGG 0.276006 8_3:-67211408 None:intergenic
GATGATACAGAATTGTTGTT+AGG 0.282363 8_3:-67208151 None:intergenic
ATATTACTGAGCCAGGATTT+AGG 0.288701 8_3:+67213227 Msa1303900:three_prime_UTR
GTGCAACGAGACAAAAGTTT+TGG 0.288822 8_3:+67212271 Msa1303900:CDS
GTAGACAGATCCGTTGTAAT+TGG 0.289688 8_3:+67211339 Msa1303900:CDS
CCCTAGATCGGCCTGTCTTC+TGG 0.289831 8_3:-67210619 None:intergenic
ACATCTTCAGTTCTAGGGTT+AGG 0.304136 8_3:-67208336 None:intergenic
GGTGCTCTTGGGGCTGGGTA+CGG 0.320968 8_3:+67212891 Msa1303900:CDS
TGCTGAGTGGTGGCAACATT+AGG 0.328886 8_3:-67212924 None:intergenic
ATAAACACATCCTTTGTCAT+AGG 0.331362 8_3:-67212978 None:intergenic
ATTTGGTTAGGTAAGGGATA+TGG 0.334230 8_3:+67213251 Msa1303900:three_prime_UTR
TTGGAACTATTGAAGATGTT+AGG 0.337285 8_3:+67212248 Msa1303900:CDS
AGAGGAGTAGAGGCTGTTCC+TGG 0.344903 8_3:-67212738 None:intergenic
TGCTCTTGGGGCTGGGTACG+GGG 0.349762 8_3:+67212893 Msa1303900:CDS
TAAATCGTTTATGGCACTTT+GGG 0.357578 8_3:-67210780 None:intergenic
AGATGTTGCCACAGAAGTTT+AGG 0.367616 8_3:+67208353 Msa1303900:exon
GGCAATGCTCGGTTTCTGTT+TGG 0.367861 8_3:+67212343 Msa1303900:CDS
AGTTGGCCATTTACCTTGAT+AGG 0.368076 8_3:-67212370 None:intergenic
TCAAGTGCTGGTGCCCTTGA+AGG 0.378286 8_3:+67209793 Msa1303900:CDS
CATGGGAATGGGTGCTCTTG+GGG 0.379768 8_3:+67212881 Msa1303900:CDS
GCAGTATTGTAAAACCATTC+TGG 0.381404 8_3:-67213025 None:intergenic
CTTGGGGCTGGGTACGGGGC+AGG 0.383014 8_3:+67212897 Msa1303900:CDS
GTATTACTACATTTAAATAA+GGG 0.383143 8_3:+67213135 Msa1303900:three_prime_UTR
GAATGGGTGCTCTTGGGGCT+GGG 0.388523 8_3:+67212886 Msa1303900:CDS
GTTTGGAGAGGTAATAGAAA+TGG 0.392212 8_3:-67208313 None:intergenic
CATCTTCAGTTCTAGGGTTA+GGG 0.396307 8_3:-67208335 None:intergenic
TCAGTTCTAGGGTTAGGGTT+TGG 0.405769 8_3:-67208330 None:intergenic
TTTAGGTATTTGGTTAGGTA+AGG 0.406906 8_3:+67213244 Msa1303900:three_prime_UTR
GAATAAGCTTGCACCCTTCA+AGG 0.408901 8_3:-67209807 None:intergenic
TGTAAGCTCTTTGTGAATAA+GGG 0.413107 8_3:+67213274 Msa1303900:three_prime_UTR
ACCAGAAGACAGGCCGATCT+AGG 0.413231 8_3:+67210618 Msa1303900:CDS
GCTGAGTGGTGGCAACATTA+GGG 0.418535 8_3:-67212923 None:intergenic
CAGGATTTAGGTATTTGGTT+AGG 0.428437 8_3:+67213239 Msa1303900:three_prime_UTR
TCTGTTTGGCAAACCTATCA+AGG 0.428539 8_3:+67212357 Msa1303900:CDS
TGCCGTAAAGCGGGCAGCCA+TGG 0.435035 8_3:+67212863 Msa1303900:CDS
AGTGCCATAAACGATTTAAC+TGG 0.439194 8_3:+67210785 Msa1303900:CDS
ATGATACAGAATTGTTGTTA+GGG 0.445579 8_3:-67208150 None:intergenic
TCTTCCTCACCCTCTCTTCG+AGG 0.453680 8_3:+67208201 Msa1303900:five_prime_UTR
TGTCGGCAACATTCATCCTC+AGG 0.453788 8_3:+67209741 Msa1303900:CDS
TTAAATCGTTTATGGCACTT+TGG 0.455208 8_3:-67210781 None:intergenic
CTTCCTCACCCTCTCTTCGA+GGG 0.457725 8_3:+67208202 Msa1303900:five_prime_UTR
TAGACAGATCCGTTGTAATT+GGG 0.464335 8_3:+67211340 Msa1303900:CDS
AGTAGTAGTATAGTATTAAA+CGG 0.464823 8_3:+67208102 Msa1303900:five_prime_UTR
TGTCATCTGCAGTCATCATA+TGG 0.465231 8_3:+67210042 Msa1303900:intron
CGTTGTAATTGGGCCACAAA+AGG 0.466676 8_3:+67211350 Msa1303900:CDS
CATCCTTTGTCATAGGGGAT+TGG 0.468207 8_3:-67212971 None:intergenic
GTATATTGAGGATTCTTCTC+AGG 0.470583 8_3:-67211904 None:intergenic
TCTACGCATGTACCAGTGCC+AGG 0.473075 8_3:+67212774 Msa1303900:CDS
TTTGGAGAGGTAATAGAAAT+GGG 0.474414 8_3:-67208312 None:intergenic
GATACTTCAGGTAAATGGCT+TGG 0.477931 8_3:+67211314 Msa1303900:intron
AAGCGGGCAGCCATGGGAAT+GGG 0.480383 8_3:+67212870 Msa1303900:CDS
TCATTATATATTACTGAGCC+AGG 0.481347 8_3:+67213220 Msa1303900:three_prime_UTR
AAAGCGGGCAGCCATGGGAA+TGG 0.483227 8_3:+67212869 Msa1303900:CDS
CATCTGTAACCTCGGGACTA+AGG 0.485132 8_3:-67210387 None:intergenic
TGAAATTTGCATACAGATGA+GGG 0.486100 8_3:+67213305 Msa1303900:three_prime_UTR
ATTGCTATTGTGACTCTCAA+TGG 0.491515 8_3:+67210099 Msa1303900:CDS
GATTAATAAGAGCAGGGTGT+TGG 0.494163 8_3:-67208408 None:intergenic
CAGAGTTGCATCTGTAACCT+CGG 0.497849 8_3:-67210395 None:intergenic
CCAGAAGACAGGCCGATCTA+GGG 0.498360 8_3:+67210619 Msa1303900:CDS
CAAGTGCTGGTGCCCTTGAA+GGG 0.498365 8_3:+67209794 Msa1303900:CDS
TTGAAAACAGCTCTTGAAGT+AGG 0.498626 8_3:-67209774 None:intergenic
GGCAGATTTCCACTCAAGAT+AGG 0.499163 8_3:-67209083 None:intergenic
TGAAAACAGCTCTTGAAGTA+GGG 0.501288 8_3:-67209773 None:intergenic
TTGCTATTGTGACTCTCAAT+GGG 0.502486 8_3:+67210100 Msa1303900:CDS
TGCTCTTATTAATCCTCCAC+AGG 0.502530 8_3:+67208417 Msa1303900:CDS
TAAACACATCCTTTGTCATA+GGG 0.505368 8_3:-67212977 None:intergenic
GGTAGCAAGCCTACTCCTCC+AGG 0.506780 8_3:+67212720 Msa1303900:CDS
TGTGGAGGATTAATAAGAGC+AGG 0.507159 8_3:-67208415 None:intergenic
AAAAGACAGACAATAGAAAG+AGG 0.507207 8_3:-67208179 None:intergenic
TGGCAACATCTTCAGTTCTA+GGG 0.507895 8_3:-67208341 None:intergenic
GAGGCTGTTCCTGGAGGAGT+AGG 0.509965 8_3:-67212729 None:intergenic
TTGAAATTTGCATACAGATG+AGG 0.511061 8_3:+67213304 Msa1303900:three_prime_UTR
CAAGCTTATTCGAAAAGAAA+AGG 0.511179 8_3:+67209819 Msa1303900:CDS
CAATATACCACTGTTTATGT+TGG 0.511712 8_3:+67211919 Msa1303900:CDS
CTTCTCAGGACTGTCATCAC+TGG 0.513827 8_3:-67211890 None:intergenic
GTAATGTGGGACCAGAAGAC+AGG 0.513950 8_3:+67210608 Msa1303900:CDS
CAAGTACTCGAATCAAAGCC+AGG 0.514270 8_3:-67209107 None:intergenic
TTGAGTGGAAATCTGCCTCC+TGG 0.517070 8_3:+67209089 Msa1303900:CDS
AAAGAGAAAAGAAAATAAGA+AGG 0.517982 8_3:-67208271 None:intergenic
CTAACCAAATACCTAAATCC+TGG 0.519159 8_3:-67213238 None:intergenic
TGAGGCACATGCCGTAAAGC+GGG 0.519673 8_3:+67212854 Msa1303900:CDS
ATAGAAAATAGTACAACAAA+GGG 0.520818 8_3:-67213068 None:intergenic
GTAGAAGCTGGTGGTGGAAG+AGG 0.523058 8_3:-67212756 None:intergenic
CAGAAGACAGGCCGATCTAG+GGG 0.524639 8_3:+67210620 Msa1303900:CDS
GAGTTAACTAGTGGAACATC+TGG 0.525972 8_3:+67211422 Msa1303900:CDS
AATAAGCTTGCACCCTTCAA+GGG 0.526793 8_3:-67209806 None:intergenic
TCATACAATGCAAGACCGGC+AGG 0.531526 8_3:-67212804 None:intergenic
GGCTTTGAGCAAAATGAATG+AGG 0.532599 8_3:+67212836 Msa1303900:CDS
GCCGTAAAGCGGGCAGCCAT+GGG 0.532748 8_3:+67212864 Msa1303900:CDS
GCAGGTGAAAACCCTGGCAC+TGG 0.532863 8_3:-67212786 None:intergenic
CTATACAGATGGGCAATGCT+CGG 0.533465 8_3:+67212332 Msa1303900:CDS
GCAGTCATCATATGGCTTCG+TGG 0.534797 8_3:+67210050 Msa1303900:intron
TAGCCCTAAAAGAGTGCCCT+GGG 0.535174 8_3:-67213175 None:intergenic
CGAGGGCATGAAAATGATGA+TGG 0.536381 8_3:-67212222 None:intergenic
AAGCATAAAGAAACTACAAA+AGG 0.536917 8_3:-67213103 None:intergenic
TGGAACTATTGAAGATGTTA+GGG 0.538403 8_3:+67212249 Msa1303900:CDS
ATAGCCCTAAAAGAGTGCCC+TGG 0.539964 8_3:-67213176 None:intergenic
CCCAAGAGCACCCATTCCCA+TGG 0.540481 8_3:-67212880 None:intergenic
ACAAAAGGAGCTAATATCAA+TGG 0.540541 8_3:+67211365 Msa1303900:CDS
TTAGGTATTTGGTTAGGTAA+GGG 0.541014 8_3:+67213245 Msa1303900:three_prime_UTR
AGCAGCTCTTGCTATACAGA+TGG 0.541824 8_3:+67212321 Msa1303900:CDS
TTGGGGAAATGCAGTTATGT+CGG 0.542976 8_3:+67209724 Msa1303900:intron
TGGTTTGTTGCAGAGATGCA+AGG 0.548391 8_3:+67210585 Msa1303900:intron
CAGATAGAGCCTATCTTGAG+TGG 0.550585 8_3:+67209074 Msa1303900:intron
TTCAGAGTCCAAAAGTGTTG+TGG 0.550682 8_3:+67211400 Msa1303900:CDS
TATCCAATCCCCTATGACAA+AGG 0.552526 8_3:+67212968 Msa1303900:three_prime_UTR
AGTTTATTGAGCCGCCAGAA+TGG 0.556541 8_3:+67213011 Msa1303900:three_prime_UTR
AGAGAGTGTTGCTGAATCAG+AGG 0.559825 8_3:-67208382 None:intergenic
AGCAAGAGCTGCTTCACCAT+GGG 0.563783 8_3:-67212311 None:intergenic
ACATAAACAGTGGTATATTG+AGG 0.570472 8_3:-67211916 None:intergenic
TGCATTGTATGAACGCCAGT+TGG 0.572674 8_3:+67212815 Msa1303900:CDS
AAACCCTCGAAGAGAGGGTG+AGG 0.574160 8_3:-67208205 None:intergenic
AATAGAAAATAGTACAACAA+AGG 0.576697 8_3:-67213069 None:intergenic
GGTTTGTTGCAGAGATGCAA+GGG 0.576728 8_3:+67210586 Msa1303900:intron
GGTCAGAGAGAAGACACATC+AGG 0.578022 8_3:+67210249 Msa1303900:CDS
GATACAGAATTGTTGTTAGG+GGG 0.579271 8_3:-67208148 None:intergenic
GAAAATAGTACAACAAAGGG+AGG 0.580082 8_3:-67213065 None:intergenic
GCGTTCATACAATGCAAGAC+CGG 0.582208 8_3:-67212808 None:intergenic
AGAGTTGCATCTGTAACCTC+GGG 0.585816 8_3:-67210394 None:intergenic
CAGAGATGCAAGGGTAATGT+GGG 0.590138 8_3:+67210595 Msa1303900:intron
GCAGTCTATCAAAGTTAACT+GGG 0.592742 8_3:+67210215 Msa1303900:CDS
TGGTGGTGGAAGAGGAGTAG+AGG 0.594572 8_3:-67212748 None:intergenic
GTGAAAAGTGGAACCTGTGG+AGG 0.597511 8_3:-67208430 None:intergenic
TGTTGGCAATCTTGCTCCCG+AGG 0.597874 8_3:+67211936 Msa1303900:CDS
GCAGCTCTTGCTATACAGAT+GGG 0.603103 8_3:+67212322 Msa1303900:CDS
CTACGCATGTACCAGTGCCA+GGG 0.604450 8_3:+67212775 Msa1303900:CDS
GCAGAGATGCAAGGGTAATG+TGG 0.605714 8_3:+67210594 Msa1303900:intron
AGTGTTGTGGAGTTAACTAG+TGG 0.606608 8_3:+67211413 Msa1303900:CDS
ACTGGTACATGCGTAGAAGC+TGG 0.610837 8_3:-67212768 None:intergenic
ATGAGGCACATGCCGTAAAG+CGG 0.612710 8_3:+67212853 Msa1303900:CDS
TAGCAAGAGCTGCTTCACCA+TGG 0.619823 8_3:-67212312 None:intergenic
ACATGCGTAGAAGCTGGTGG+TGG 0.621131 8_3:-67212762 None:intergenic
AAACACATCCTTTGTCATAG+GGG 0.623129 8_3:-67212976 None:intergenic
TGATACAGAATTGTTGTTAG+GGG 0.623310 8_3:-67208149 None:intergenic
GTACATTAGGTGCTGAGTGG+TGG 0.623532 8_3:-67212934 None:intergenic
GAAAACAGCTCTTGAAGTAG+GGG 0.627476 8_3:-67209772 None:intergenic
TTCAATAGTTCCAACACCGA+GGG 0.628747 8_3:-67212239 None:intergenic
TGTTGGCGACCTTAGTCCCG+AGG 0.631773 8_3:+67210378 Msa1303900:CDS
ATAGTACAACAAAGGGAGGG+TGG 0.632298 8_3:-67213061 None:intergenic
GGATTCTGCCTAAACTTCTG+TGG 0.638569 8_3:-67208361 None:intergenic
ATTTGCATACAGATGAGGGA+AGG 0.645731 8_3:+67213309 Msa1303900:three_prime_UTR
GTTAACTGGGCTTATACTCG+TGG 0.652233 8_3:+67210228 Msa1303900:CDS
AGACCGGCAGGTGAAAACCC+TGG 0.653386 8_3:-67212792 None:intergenic
TCTAGGGTTAGGGTTTGGAG+AGG 0.653838 8_3:-67208325 None:intergenic
GTGGAGGATTAATAAGAGCA+GGG 0.654194 8_3:-67208414 None:intergenic
AAAATAGTACAACAAAGGGA+GGG 0.662308 8_3:-67213064 None:intergenic
GGAGTAGAGGCTGTTCCTGG+AGG 0.669202 8_3:-67212735 None:intergenic
CTATTGTGACTCTCAATGGG+AGG 0.669427 8_3:+67210103 Msa1303900:CDS
AAGATTGCCAACATAAACAG+TGG 0.678611 8_3:-67211926 None:intergenic
GTATTGTAAAACCATTCTGG+CGG 0.679906 8_3:-67213022 None:intergenic
AGAAGACAGGCCGATCTAGG+GGG 0.682305 8_3:+67210621 Msa1303900:CDS
TTTGTGAGATACAGTACCCA+TGG 0.685076 8_3:+67212295 Msa1303900:CDS
CTTCAATAGTTCCAACACCG+AGG 0.694923 8_3:-67212240 None:intergenic
AGTAGGGGCTCTGAAACCTG+AGG 0.701470 8_3:-67209757 None:intergenic
GCCCTAAAAGAGTGCCCTGG+GGG 0.703980 8_3:-67213173 None:intergenic
GTAGTACATTAGGTGCTGAG+TGG 0.731282 8_3:-67212937 None:intergenic
CAATTTAGACTCACACACTG+CGG 0.734937 8_3:-67209130 None:intergenic
AGCCCTAAAAGAGTGCCCTG+GGG 0.752272 8_3:-67213174 None:intergenic
GGTACATGCGTAGAAGCTGG+TGG 0.755423 8_3:-67212765 None:intergenic
GTACTCGAATCAAAGCCAGG+AGG 0.789603 8_3:-67209104 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGAAAAAGAAAAAAAAA+AGG - chr8_3:67208251-67208270 None:intergenic 10.0%
!!! TTACATATCTATATTTTTTT+AGG - chr8_3:67208538-67208557 None:intergenic 10.0%
!! TAAAAAACCAAAAAATAAAA+AGG - chr8_3:67209041-67209060 None:intergenic 10.0%
!!! AAATAAATAAACATTTTGAT+TGG + chr8_3:67211113-67211132 Msa1303900:intron 10.0%
!! TATAAAAAATAAGTGAAAAG+TGG - chr8_3:67208445-67208464 None:intergenic 15.0%
!!! TAGTATATAATTTTGCTTTT+AGG + chr8_3:67209008-67209027 Msa1303900:intron 15.0%
!!! ATTTTCTCCTTTTTATTTTT+TGG + chr8_3:67209031-67209050 Msa1303900:intron 15.0%
!!! AGTTATTTTAGTTTTTAAGT+TGG + chr8_3:67209236-67209255 Msa1303900:intron 15.0%
!!! ATTTATTTTTAGTTTCAAGT+TGG - chr8_3:67209504-67209523 None:intergenic 15.0%
!! TGAAACTAAAAATAAATGTA+AGG + chr8_3:67209507-67209526 Msa1303900:intron 15.0%
!! GAAACTAAAAATAAATGTAA+GGG + chr8_3:67209508-67209527 Msa1303900:intron 15.0%
!!! GAAACAATTTACAATTTTAA+AGG - chr8_3:67209604-67209623 None:intergenic 15.0%
!!! TATATCTAATAATCACTTTT+GGG + chr8_3:67209706-67209725 Msa1303900:intron 15.0%
!! TTTATTAACCAAAAAATAGT+TGG + chr8_3:67209940-67209959 Msa1303900:intron 15.0%
!!! ATTTACTTTTACTATTCAAT+CGG + chr8_3:67210333-67210352 Msa1303900:intron 15.0%
!! TCGAAAAAAGAAAATATAAA+GGG - chr8_3:67210467-67210486 None:intergenic 15.0%
!! ATCGAAAAAAGAAAATATAA+AGG - chr8_3:67210468-67210487 None:intergenic 15.0%
!! TTGAAAAAATATAAATGATG+TGG - chr8_3:67210898-67210917 None:intergenic 15.0%
!! ATAAACAATTTACATCTTAA+AGG - chr8_3:67210921-67210940 None:intergenic 15.0%
!! TTCAACTAAAAAAATAAATC+TGG - chr8_3:67210978-67210997 None:intergenic 15.0%
!!! ATTATACAAAAATTCCTTTT+TGG + chr8_3:67211460-67211479 Msa1303900:intron 15.0%
!!! TTATACAAAAATTCCTTTTT+GGG + chr8_3:67211461-67211480 Msa1303900:intron 15.0%
!! TTTAAAAATATTCCAATTGT+TGG + chr8_3:67211627-67211646 Msa1303900:intron 15.0%
!! ATTATGAAGCTTATTATATA+TGG - chr8_3:67212629-67212648 None:intergenic 15.0%
!! TGTATTACTACATTTAAATA+AGG + chr8_3:67213134-67213153 Msa1303900:three_prime_UTR 15.0%
!! GTATTACTACATTTAAATAA+GGG + chr8_3:67213135-67213154 Msa1303900:three_prime_UTR 15.0%
!!! TTAAACTTTCAATATTTTAC+AGG - chr8_3:67213357-67213376 None:intergenic 15.0%
!! AGTAGTAGTATAGTATTAAA+CGG + chr8_3:67208102-67208121 Msa1303900:five_prime_UTR 20.0%
!! AAAGAGAAAAGAAAATAAGA+AGG - chr8_3:67208274-67208293 None:intergenic 20.0%
!! TTGAAAATAATCACTTATGT+CGG - chr8_3:67208696-67208715 None:intergenic 20.0%
!!! GTATTTGAATTTTGTTTGAT+TGG + chr8_3:67208971-67208990 Msa1303900:intron 20.0%
!!! TTCTATTGTTCTTTCTTTTT+TGG + chr8_3:67209188-67209207 Msa1303900:intron 20.0%
!!! ATGTTTAAAAAGTTTGAAGT+TGG - chr8_3:67209475-67209494 None:intergenic 20.0%
!!! ACTTCAAACTTTTTAAACAT+AGG + chr8_3:67209475-67209494 Msa1303900:intron 20.0%
!!! CTTCAAACTTTTTAAACATA+GGG + chr8_3:67209476-67209495 Msa1303900:intron 20.0%
!!! TTCAAACTTTTTAAACATAG+GGG + chr8_3:67209477-67209496 Msa1303900:intron 20.0%
!! ACTAGATAAACAAAAAACTA+AGG - chr8_3:67209535-67209554 None:intergenic 20.0%
!! TAAAAACAAAGAAAAACTCA+CGG - chr8_3:67209672-67209691 None:intergenic 20.0%
!!! GTATATCTAATAATCACTTT+TGG + chr8_3:67209705-67209724 Msa1303900:intron 20.0%
!!! ATATCTAATAATCACTTTTG+GGG + chr8_3:67209707-67209726 Msa1303900:intron 20.0%
!!! GTATGTATTTTCTTAGTTAA+TGG + chr8_3:67210131-67210150 Msa1303900:intron 20.0%
!!! ATTTTTTGTTTTCAACATAG+TGG + chr8_3:67210842-67210861 Msa1303900:intron 20.0%
!! TAGTTGAAATCACATTATAT+CGG + chr8_3:67210990-67211009 Msa1303900:intron 20.0%
!!! AAACATTTTGATTGGTTATA+TGG + chr8_3:67211121-67211140 Msa1303900:intron 20.0%
!!! AACATTTTGATTGGTTATAT+GGG + chr8_3:67211122-67211141 Msa1303900:intron 20.0%
!! CAGAAAAACAATAAAAAATC+CGG - chr8_3:67211295-67211314 None:intergenic 20.0%
!!! TAATTTTCAATCTATCATAG+TGG + chr8_3:67211786-67211805 Msa1303900:intron 20.0%
!! ATAGATATGAATGATTAGTA+AGG - chr8_3:67212001-67212020 None:intergenic 20.0%
!!! ATTAGTATCTGTAATTTTCA+AGG + chr8_3:67212521-67212540 Msa1303900:intron 20.0%
!! ATAGAAAATAGTACAACAAA+GGG - chr8_3:67213071-67213090 None:intergenic 20.0%
!! AATAGAAAATAGTACAACAA+AGG - chr8_3:67213072-67213091 None:intergenic 20.0%
!! ATGATACAGAATTGTTGTTA+GGG - chr8_3:67208153-67208172 None:intergenic 25.0%
!!! ATCTATATTTTTTTAGGCGA+TGG - chr8_3:67208532-67208551 None:intergenic 25.0%
! CTGTAAATGCTTAATAACTT+AGG + chr8_3:67208779-67208798 Msa1303900:intron 25.0%
! ATGTTTAAAAAGTTCCAAGT+TGG + chr8_3:67209265-67209284 Msa1303900:intron 25.0%
! TCTTAGTTAATGGTAGTTAT+TGG + chr8_3:67210141-67210160 Msa1303900:intron 25.0%
! TTTACTATTCAATCGGATTT+AGG + chr8_3:67210340-67210359 Msa1303900:intron 25.0%
! TTCATTAATATCATGACACT+TGG + chr8_3:67210565-67210584 Msa1303900:intron 25.0%
! ACTAAAAAAATAAATCTGGC+TGG - chr8_3:67210974-67210993 None:intergenic 25.0%
! TCGGAAAATTAATATACATG+TGG + chr8_3:67211009-67211028 Msa1303900:intron 25.0%
! TAAATTAGCGATAATGCTAT+TGG + chr8_3:67211195-67211214 Msa1303900:intron 25.0%
!!! TATTGTTTTTCTGATACTTC+AGG + chr8_3:67211302-67211321 Msa1303900:intron 25.0%
! AAAAATGAAAACACCCAAAA+AGG - chr8_3:67211477-67211496 None:intergenic 25.0%
!!! GGCTTCAAATGATTTTTTAA+CGG + chr8_3:67211648-67211667 Msa1303900:intron 25.0%
!!! GCTTCAAATGATTTTTTAAC+GGG + chr8_3:67211649-67211668 Msa1303900:intron 25.0%
!!! CTTCAAATGATTTTTTAACG+GGG + chr8_3:67211650-67211669 Msa1303900:intron 25.0%
!!! ACAGCTTTAAAGCTAATATT+AGG - chr8_3:67211680-67211699 None:intergenic 25.0%
! ACTAATCATTCATATCTATC+TGG + chr8_3:67212002-67212021 Msa1303900:intron 25.0%
! CTAATCATTCATATCTATCT+GGG + chr8_3:67212003-67212022 Msa1303900:intron 25.0%
! ACTTTCTCTGTCTATTTAAA+TGG + chr8_3:67212029-67212048 Msa1303900:intron 25.0%
! CTTTCTCTGTCTATTTAAAT+GGG + chr8_3:67212030-67212049 Msa1303900:intron 25.0%
! AGACTATAGTTACTATAGTA+TGG + chr8_3:67212056-67212075 Msa1303900:intron 25.0%
! TTAGAACAAACTGAATTTAC+AGG - chr8_3:67212149-67212168 None:intergenic 25.0%
!!! AAAATTGCCTTTTGTTATCA+TGG + chr8_3:67212167-67212186 Msa1303900:intron 25.0%
! ATAAGCTTCATAATACTCAA+AGG + chr8_3:67212635-67212654 Msa1303900:intron 25.0%
!! TATTTTACTGGTAGTACATT+AGG - chr8_3:67212950-67212969 None:intergenic 25.0%
! AAGCATAAAGAAACTACAAA+AGG - chr8_3:67213106-67213125 None:intergenic 25.0%
! TGATACAGAATTGTTGTTAG+GGG - chr8_3:67208152-67208171 None:intergenic 30.0%
! GATGATACAGAATTGTTGTT+AGG - chr8_3:67208154-67208173 None:intergenic 30.0%
AAAAGACAGACAATAGAAAG+AGG - chr8_3:67208182-67208201 None:intergenic 30.0%
TTTGGAGAGGTAATAGAAAT+GGG - chr8_3:67208315-67208334 None:intergenic 30.0%
! TGTTATGAGCAATTCTTTTG+TGG + chr8_3:67208811-67208830 Msa1303900:intron 30.0%
CACACATGTAAAAAGCAAAA+AGG + chr8_3:67208864-67208883 Msa1303900:intron 30.0%
!! TTTGATTGGATTAGTAGAGA+GGG + chr8_3:67208985-67209004 Msa1303900:intron 30.0%
!! TTTTGGCTAAATTGCATGTT+TGG + chr8_3:67209205-67209224 Msa1303900:intron 30.0%
CAAGCTTATTCGAAAAGAAA+AGG + chr8_3:67209819-67209838 Msa1303900:CDS 30.0%
!!! TTGTCTAGCCAACTATTTTT+TGG - chr8_3:67209951-67209970 None:intergenic 30.0%
AAAATAGTTGGCTAGACAAT+TGG + chr8_3:67209952-67209971 Msa1303900:intron 30.0%
CAATATATAGCAGATCATCA+TGG - chr8_3:67210024-67210043 None:intergenic 30.0%
GTTAATGGTAGTTATTGGAA+CGG + chr8_3:67210146-67210165 Msa1303900:intron 30.0%
! TTCTGCTGATTATGTATGTT+TGG + chr8_3:67210278-67210297 Msa1303900:intron 30.0%
ATTTGTGTTCAGAAAAAGAC+AGG - chr8_3:67210315-67210334 None:intergenic 30.0%
!!! CTTTTTTCGATTTGTTATCC+CGG + chr8_3:67210477-67210496 Msa1303900:intron 30.0%
TGTTATCTTTCTTCTCTCTT+TGG + chr8_3:67210699-67210718 Msa1303900:intron 30.0%
GGTGACTTATGTAATTTAAC+AGG + chr8_3:67210754-67210773 Msa1303900:intron 30.0%
TAAATCGTTTATGGCACTTT+GGG - chr8_3:67210783-67210802 None:intergenic 30.0%
TTAAATCGTTTATGGCACTT+TGG - chr8_3:67210784-67210803 None:intergenic 30.0%
CTTACCAGTTAAATCGTTTA+TGG - chr8_3:67210792-67210811 None:intergenic 30.0%
! TAATTGTGCTGTTGTTTATG+CGG + chr8_3:67211083-67211102 Msa1303900:intron 30.0%
! TGATTGGTTATATGGGATTA+TGG + chr8_3:67211129-67211148 Msa1303900:intron 30.0%
GACTTGAATATCAAATGCTT+CGG - chr8_3:67211156-67211175 None:intergenic 30.0%
CTAATTTACTGGTATTAGTG+AGG - chr8_3:67211183-67211202 None:intergenic 30.0%
TAGCATTATCGCTAATTTAC+TGG - chr8_3:67211194-67211213 None:intergenic 30.0%
TTTCTGATACTTCAGGTAAA+TGG + chr8_3:67211309-67211328 Msa1303900:intron 30.0%
! ATTGATATTAGCTCCTTTTG+TGG - chr8_3:67211366-67211385 None:intergenic 30.0%
ACAAAAGGAGCTAATATCAA+TGG + chr8_3:67211365-67211384 Msa1303900:CDS 30.0%
! AATCATTTGAAGCCAACAAT+TGG - chr8_3:67211642-67211661 None:intergenic 30.0%
!!! CGGTTTTTTCATTTATGTCA+CGG + chr8_3:67211720-67211739 Msa1303900:intron 30.0%
AATAATGCTTACTTCTTGGT+TGG + chr8_3:67211833-67211852 Msa1303900:intron 30.0%
ACATAAACAGTGGTATATTG+AGG - chr8_3:67211919-67211938 None:intergenic 30.0%
CAATATACCACTGTTTATGT+TGG + chr8_3:67211919-67211938 Msa1303900:CDS 30.0%
TTGGAACTATTGAAGATGTT+AGG + chr8_3:67212248-67212267 Msa1303900:CDS 30.0%
TGGAACTATTGAAGATGTTA+GGG + chr8_3:67212249-67212268 Msa1303900:CDS 30.0%
! TGATATCTGTCTATCCTTTT+TGG + chr8_3:67212449-67212468 Msa1303900:intron 30.0%
CTCTAGATAAAAAGCCAAAA+AGG - chr8_3:67212466-67212485 None:intergenic 30.0%
!!! CTTTTTGGCTTTTTATCTAG+AGG + chr8_3:67212464-67212483 Msa1303900:intron 30.0%
!!! CCTTGATACAACATTTTTTC+TGG - chr8_3:67212497-67212516 None:intergenic 30.0%
CCAGAAAAAATGTTGTATCA+AGG + chr8_3:67212494-67212513 Msa1303900:intron 30.0%
!! TCTGTAATTTTCAAGGACAA+AGG + chr8_3:67212528-67212547 Msa1303900:intron 30.0%
AAGCTTATTATATATGGTCG+AGG - chr8_3:67212623-67212642 None:intergenic 30.0%
! TTGATATTTTGCAGTGTTCA+TGG + chr8_3:67212697-67212716 Msa1303900:intron 30.0%
! TGATATTTTGCAGTGTTCAT+GGG + chr8_3:67212698-67212717 Msa1303900:intron 30.0%
TAAACACATCCTTTGTCATA+GGG - chr8_3:67212980-67212999 None:intergenic 30.0%
ATAAACACATCCTTTGTCAT+AGG - chr8_3:67212981-67213000 None:intergenic 30.0%
AAAATAGTACAACAAAGGGA+GGG - chr8_3:67213067-67213086 None:intergenic 30.0%
TCATTATATATTACTGAGCC+AGG + chr8_3:67213220-67213239 Msa1303900:three_prime_UTR 30.0%
TTTAGGTATTTGGTTAGGTA+AGG + chr8_3:67213244-67213263 Msa1303900:three_prime_UTR 30.0%
TTAGGTATTTGGTTAGGTAA+GGG + chr8_3:67213245-67213264 Msa1303900:three_prime_UTR 30.0%
TGTAAGCTCTTTGTGAATAA+GGG + chr8_3:67213274-67213293 Msa1303900:three_prime_UTR 30.0%
TTGAAATTTGCATACAGATG+AGG + chr8_3:67213304-67213323 Msa1303900:three_prime_UTR 30.0%
TGAAATTTGCATACAGATGA+GGG + chr8_3:67213305-67213324 Msa1303900:three_prime_UTR 30.0%
! GATACAGAATTGTTGTTAGG+GGG - chr8_3:67208151-67208170 None:intergenic 35.0%
AAAAAAAACCCTCGAAGAGA+GGG - chr8_3:67208213-67208232 None:intergenic 35.0%
AAAAAAAAACCCTCGAAGAG+AGG - chr8_3:67208214-67208233 None:intergenic 35.0%
GTTTGGAGAGGTAATAGAAA+TGG - chr8_3:67208316-67208335 None:intergenic 35.0%
AATAATCACTTATGTCGGTG+TGG - chr8_3:67208691-67208710 None:intergenic 35.0%
AAAGAATTATTCAGCGTTGC+TGG + chr8_3:67208948-67208967 Msa1303900:intron 35.0%
AAGAATTATTCAGCGTTGCT+GGG + chr8_3:67208949-67208968 Msa1303900:intron 35.0%
!! GTTTGATTGGATTAGTAGAG+AGG + chr8_3:67208984-67209003 Msa1303900:intron 35.0%
! TGTAGACATCAGTATCGAAA+TGG - chr8_3:67209292-67209311 None:intergenic 35.0%
ACGAACACATGGATAACTTT+GGG - chr8_3:67209375-67209394 None:intergenic 35.0%
TTAAAGGCAATGAAGTCAAC+AGG - chr8_3:67209588-67209607 None:intergenic 35.0%
TGAAAACAGCTCTTGAAGTA+GGG - chr8_3:67209776-67209795 None:intergenic 35.0%
TTGAAAACAGCTCTTGAAGT+AGG - chr8_3:67209777-67209796 None:intergenic 35.0%
GCTAGACAATTGGCTATATA+TGG + chr8_3:67209962-67209981 Msa1303900:intron 35.0%
ATCATCATGGTTGAAAAGAC+AGG - chr8_3:67210011-67210030 None:intergenic 35.0%
! ATTGCTATTGTGACTCTCAA+TGG + chr8_3:67210099-67210118 Msa1303900:CDS 35.0%
! TTGCTATTGTGACTCTCAAT+GGG + chr8_3:67210100-67210119 Msa1303900:CDS 35.0%
! AACACATTGTCTGCAGTTTT+GGG + chr8_3:67210193-67210212 Msa1303900:intron 35.0%
GCAGTCTATCAAAGTTAACT+GGG + chr8_3:67210215-67210234 Msa1303900:CDS 35.0%
!! GGACACTTCCATATTTTTGT+TGG + chr8_3:67210361-67210380 Msa1303900:intron 35.0%
TAAGGTCGCCAACAAAAATA+TGG - chr8_3:67210372-67210391 None:intergenic 35.0%
! TTTGTTATCCCGGTTTATTC+AGG + chr8_3:67210487-67210506 Msa1303900:intron 35.0%
TTGTTATCCCGGTTTATTCA+GGG + chr8_3:67210488-67210507 Msa1303900:intron 35.0%
! TGTTTCTTTTCGAAATCAGC+AGG + chr8_3:67210652-67210671 Msa1303900:CDS 35.0%
AGTGCCATAAACGATTTAAC+TGG + chr8_3:67210785-67210804 Msa1303900:CDS 35.0%
AGGTGGTTTAACCATGAAAT+AGG - chr8_3:67211037-67211056 None:intergenic 35.0%
GCATAAACAACAGCACAATT+AGG - chr8_3:67211084-67211103 None:intergenic 35.0%
CGATAATGCTATTGGATGTT+TGG + chr8_3:67211203-67211222 Msa1303900:intron 35.0%
TAGACAGATCCGTTGTAATT+GGG + chr8_3:67211340-67211359 Msa1303900:CDS 35.0%
! AGTTAACTCCACAACACTTT+TGG - chr8_3:67211411-67211430 None:intergenic 35.0%
!!! GTTTTTTTATCGTGTGCAGT+TGG + chr8_3:67211503-67211522 Msa1303900:intron 35.0%
ACCAAGCAAAATCAACAATC+AGG - chr8_3:67211812-67211831 None:intergenic 35.0%
GGTGAATAATGCTTACTTCT+TGG + chr8_3:67211829-67211848 Msa1303900:intron 35.0%
GTATATTGAGGATTCTTCTC+AGG - chr8_3:67211907-67211926 None:intergenic 35.0%
AAGATTGCCAACATAAACAG+TGG - chr8_3:67211929-67211948 None:intergenic 35.0%
! AAAAGTATGAATCCTTGCCT+CGG - chr8_3:67211956-67211975 None:intergenic 35.0%
AGTTACTATAGTATGGACTC+TGG + chr8_3:67212063-67212082 Msa1303900:intron 35.0%
TCACAGACCATGATAACAAA+AGG - chr8_3:67212177-67212196 None:intergenic 35.0%
! TGCAACGAGACAAAAGTTTT+GGG + chr8_3:67212272-67212291 Msa1303900:CDS 35.0%
ATTATAAATACCCTGCCAGT+TGG - chr8_3:67212390-67212409 None:intergenic 35.0%
! GATATTTTGCAGTGTTCATG+GGG + chr8_3:67212699-67212718 Msa1303900:intron 35.0%
! TAGGGGATTGGATATTTTAC+TGG - chr8_3:67212962-67212981 None:intergenic 35.0%
AAACACATCCTTTGTCATAG+GGG - chr8_3:67212979-67212998 None:intergenic 35.0%
GTATTGTAAAACCATTCTGG+CGG - chr8_3:67213025-67213044 None:intergenic 35.0%
GCAGTATTGTAAAACCATTC+TGG - chr8_3:67213028-67213047 None:intergenic 35.0%
GAAAATAGTACAACAAAGGG+AGG - chr8_3:67213068-67213087 None:intergenic 35.0%
ATATTACTGAGCCAGGATTT+AGG + chr8_3:67213227-67213246 Msa1303900:three_prime_UTR 35.0%
CTAACCAAATACCTAAATCC+TGG - chr8_3:67213241-67213260 None:intergenic 35.0%
CAGGATTTAGGTATTTGGTT+AGG + chr8_3:67213239-67213258 Msa1303900:three_prime_UTR 35.0%
ATTTGGTTAGGTAAGGGATA+TGG + chr8_3:67213251-67213270 Msa1303900:three_prime_UTR 35.0%
GTGTAAGCTCTTTGTGAATA+AGG + chr8_3:67213273-67213292 Msa1303900:three_prime_UTR 35.0%
!! CATCTTCAGTTCTAGGGTTA+GGG - chr8_3:67208338-67208357 None:intergenic 40.0%
!! ACATCTTCAGTTCTAGGGTT+AGG - chr8_3:67208339-67208358 None:intergenic 40.0%
TGGCAACATCTTCAGTTCTA+GGG - chr8_3:67208344-67208363 None:intergenic 40.0%
AGATGTTGCCACAGAAGTTT+AGG + chr8_3:67208353-67208372 Msa1303900:exon 40.0%
GATTAATAAGAGCAGGGTGT+TGG - chr8_3:67208411-67208430 None:intergenic 40.0%
GTGGAGGATTAATAAGAGCA+GGG - chr8_3:67208417-67208436 None:intergenic 40.0%
TGTGGAGGATTAATAAGAGC+AGG - chr8_3:67208418-67208437 None:intergenic 40.0%
TGCTCTTATTAATCCTCCAC+AGG + chr8_3:67208417-67208436 Msa1303900:CDS 40.0%
TAAGTGAAAAGTGGAACCTG+TGG - chr8_3:67208436-67208455 None:intergenic 40.0%
TACTAGTGTAGTGTCGTATC+AGG + chr8_3:67208738-67208757 Msa1303900:intron 40.0%
! GCAATTCTTTTGTGGACATG+AGG + chr8_3:67208819-67208838 Msa1303900:intron 40.0%
CAATTTAGACTCACACACTG+CGG - chr8_3:67209133-67209152 None:intergenic 40.0%
! AGTATCGAAATGGACCAACT+TGG - chr8_3:67209282-67209301 None:intergenic 40.0%
GAACACATGGATAACTTTGG+GGG - chr8_3:67209373-67209392 None:intergenic 40.0%
CGAACACATGGATAACTTTG+GGG - chr8_3:67209374-67209393 None:intergenic 40.0%
GACGAACACATGGATAACTT+TGG - chr8_3:67209376-67209395 None:intergenic 40.0%
!! AGCCACATGCATGTTTTGAA+CGG + chr8_3:67209402-67209421 Msa1303900:intron 40.0%
TTCCGTTCAAAACATGCATG+TGG - chr8_3:67209407-67209426 None:intergenic 40.0%
TCACTTAAGGCTGCTAAACT+AGG - chr8_3:67209565-67209584 None:intergenic 40.0%
TGAAGTCAACAGGTCACTTA+AGG - chr8_3:67209578-67209597 None:intergenic 40.0%
TTGGGGAAATGCAGTTATGT+CGG + chr8_3:67209724-67209743 Msa1303900:intron 40.0%
GAAAACAGCTCTTGAAGTAG+GGG - chr8_3:67209775-67209794 None:intergenic 40.0%
AATAAGCTTGCACCCTTCAA+GGG - chr8_3:67209809-67209828 None:intergenic 40.0%
TGTCATCTGCAGTCATCATA+TGG + chr8_3:67210042-67210061 Msa1303900:intron 40.0%
CAAAACTGCAGACAATGTGT+TGG - chr8_3:67210194-67210213 None:intergenic 40.0%
! CAACACATTGTCTGCAGTTT+TGG + chr8_3:67210192-67210211 Msa1303900:intron 40.0%
GGCAGTCTATCAAAGTTAAC+TGG + chr8_3:67210214-67210233 Msa1303900:CDS 40.0%
TGTTATCCCGGTTTATTCAG+GGG + chr8_3:67210489-67210508 Msa1303900:intron 40.0%
AAACATCCCCCTGAATAAAC+CGG - chr8_3:67210499-67210518 None:intergenic 40.0%
TAGTGGAAGTGAAGTGTGTA+TGG + chr8_3:67210859-67210878 Msa1303900:intron 40.0%
TACATGTGGTGCCTATTTCA+TGG + chr8_3:67211023-67211042 Msa1303900:intron 40.0%
TCATGGTTAAACCACCTTCT+AGG + chr8_3:67211040-67211059 Msa1303900:intron 40.0%
CATGGTTAAACCACCTTCTA+GGG + chr8_3:67211041-67211060 Msa1303900:intron 40.0%
ATGGTTAAACCACCTTCTAG+GGG + chr8_3:67211042-67211061 Msa1303900:intron 40.0%
TTACTGGTATTAGTGAGGTG+AGG - chr8_3:67211178-67211197 None:intergenic 40.0%
TTTAGTGCTTCAGTTGAGTC+CGG + chr8_3:67211273-67211292 Msa1303900:intron 40.0%
GATACTTCAGGTAAATGGCT+TGG + chr8_3:67211314-67211333 Msa1303900:intron 40.0%
GTAGACAGATCCGTTGTAAT+TGG + chr8_3:67211339-67211358 Msa1303900:CDS 40.0%
! CTTTTGTGGCCCAATTACAA+CGG - chr8_3:67211352-67211371 None:intergenic 40.0%
!! TTCAGAGTCCAAAAGTGTTG+TGG + chr8_3:67211400-67211419 Msa1303900:CDS 40.0%
AGTGTTGTGGAGTTAACTAG+TGG + chr8_3:67211413-67211432 Msa1303900:CDS 40.0%
GAGTTAACTAGTGGAACATC+TGG + chr8_3:67211422-67211441 Msa1303900:CDS 40.0%
TGAATGTTGTTGTAGTCGTG+CGG + chr8_3:67211700-67211719 Msa1303900:intron 40.0%
!!! GCCTGATTGTTGATTTTGCT+TGG + chr8_3:67211808-67211827 Msa1303900:intron 40.0%
!! ATTTTCTGTAGAAGAAGCGC+AGG + chr8_3:67211861-67211880 Msa1303900:intron 40.0%
AAAGTATGAATCCTTGCCTC+GGG - chr8_3:67211955-67211974 None:intergenic 40.0%
! CATCATCATTTTCATGCCCT+CGG + chr8_3:67212223-67212242 Msa1303900:CDS 40.0%
TTCAATAGTTCCAACACCGA+GGG - chr8_3:67212242-67212261 None:intergenic 40.0%
! GTGCAACGAGACAAAAGTTT+TGG + chr8_3:67212271-67212290 Msa1303900:CDS 40.0%
TTTGTGAGATACAGTACCCA+TGG + chr8_3:67212295-67212314 Msa1303900:CDS 40.0%
TCTGTTTGGCAAACCTATCA+AGG + chr8_3:67212357-67212376 Msa1303900:CDS 40.0%
GGCAAACCTATCAAGGTAAA+TGG + chr8_3:67212364-67212383 Msa1303900:intron 40.0%
AGTTGGCCATTTACCTTGAT+AGG - chr8_3:67212373-67212392 None:intergenic 40.0%
TATCAAGGTAAATGGCCAAC+TGG + chr8_3:67212372-67212391 Msa1303900:intron 40.0%
! TCATTTTGCTCAAAGCCAAC+TGG - chr8_3:67212833-67212852 None:intergenic 40.0%
!! GGCTTTGAGCAAAATGAATG+AGG + chr8_3:67212836-67212855 Msa1303900:CDS 40.0%
TATCCAATCCCCTATGACAA+AGG + chr8_3:67212968-67212987 Msa1303900:three_prime_UTR 40.0%
!!! CACTCTTTTAGGGCTATAAG+TGG + chr8_3:67213182-67213201 Msa1303900:three_prime_UTR 40.0%
TGAGCCAGGATTTAGGTATT+TGG + chr8_3:67213234-67213253 Msa1303900:three_prime_UTR 40.0%
ATTTGCATACAGATGAGGGA+AGG + chr8_3:67213309-67213328 Msa1303900:three_prime_UTR 40.0%
!! TCAGTTCTAGGGTTAGGGTT+TGG - chr8_3:67208333-67208352 None:intergenic 45.0%
GTGGCAACATCTTCAGTTCT+AGG - chr8_3:67208345-67208364 None:intergenic 45.0%
GGATTCTGCCTAAACTTCTG+TGG - chr8_3:67208364-67208383 None:intergenic 45.0%
!! AGAGAGTGTTGCTGAATCAG+AGG - chr8_3:67208385-67208404 None:intergenic 45.0%
CTTCTATCAGAGCTAGCTGT+CGG - chr8_3:67208649-67208668 None:intergenic 45.0%
CAGATAGAGCCTATCTTGAG+TGG + chr8_3:67209074-67209093 Msa1303900:intron 45.0%
GGCAGATTTCCACTCAAGAT+AGG - chr8_3:67209086-67209105 None:intergenic 45.0%
CAAGTACTCGAATCAAAGCC+AGG - chr8_3:67209110-67209129 None:intergenic 45.0%
ATGTGTCCAAAACGTCCACA+TGG + chr8_3:67209345-67209364 Msa1303900:intron 45.0%
AGAAAAACTCACGGAGACTG+CGG - chr8_3:67209663-67209682 None:intergenic 45.0%
!!! CAAGAGCTGTTTTCAAGTGC+TGG + chr8_3:67209781-67209800 Msa1303900:CDS 45.0%
GAATAAGCTTGCACCCTTCA+AGG - chr8_3:67209810-67209829 None:intergenic 45.0%
CTATTGTGACTCTCAATGGG+AGG + chr8_3:67210103-67210122 Msa1303900:CDS 45.0%
GTTAACTGGGCTTATACTCG+TGG + chr8_3:67210228-67210247 Msa1303900:CDS 45.0%
AGAGTTGCATCTGTAACCTC+GGG - chr8_3:67210397-67210416 None:intergenic 45.0%
CAGAGTTGCATCTGTAACCT+CGG - chr8_3:67210398-67210417 None:intergenic 45.0%
GTTATCCCGGTTTATTCAGG+GGG + chr8_3:67210490-67210509 Msa1303900:intron 45.0%
AACATCCCCCTGAATAAACC+GGG - chr8_3:67210498-67210517 None:intergenic 45.0%
!! TGGTTTGTTGCAGAGATGCA+AGG + chr8_3:67210585-67210604 Msa1303900:intron 45.0%
!! GGTTTGTTGCAGAGATGCAA+GGG + chr8_3:67210586-67210605 Msa1303900:intron 45.0%
CAGAGATGCAAGGGTAATGT+GGG + chr8_3:67210595-67210614 Msa1303900:intron 45.0%
CAAATCCAAACCCCCTAGAT+CGG - chr8_3:67210634-67210653 None:intergenic 45.0%
TTGTGTGCTTGCCATGCTAA+TGG + chr8_3:67210728-67210747 Msa1303900:intron 45.0%
TGCTTGCCATGCTAATGGTT+GGG + chr8_3:67210733-67210752 Msa1303900:intron 45.0%
AAGTCACCCAACCATTAGCA+TGG - chr8_3:67210742-67210761 None:intergenic 45.0%
TGGTTAAACCACCTTCTAGG+GGG + chr8_3:67211043-67211062 Msa1303900:intron 45.0%
CGTTGTAATTGGGCCACAAA+AGG + chr8_3:67211350-67211369 Msa1303900:CDS 45.0%
TGGAACATCTGGTGAGATCA+CGG + chr8_3:67211433-67211452 Msa1303900:intron 45.0%
ATCATGGTCTGTGAAATCGC+AGG + chr8_3:67212183-67212202 Msa1303900:intron 45.0%
! CGAGGGCATGAAAATGATGA+TGG - chr8_3:67212225-67212244 None:intergenic 45.0%
CTTCAATAGTTCCAACACCG+AGG - chr8_3:67212243-67212262 None:intergenic 45.0%
! AGCAGCTCTTGCTATACAGA+TGG + chr8_3:67212321-67212340 Msa1303900:CDS 45.0%
! GCAGCTCTTGCTATACAGAT+GGG + chr8_3:67212322-67212341 Msa1303900:CDS 45.0%
CTATACAGATGGGCAATGCT+CGG + chr8_3:67212332-67212351 Msa1303900:CDS 45.0%
GCGTTCATACAATGCAAGAC+CGG - chr8_3:67212811-67212830 None:intergenic 45.0%
TGCATTGTATGAACGCCAGT+TGG + chr8_3:67212815-67212834 Msa1303900:CDS 45.0%
!! GTAGTACATTAGGTGCTGAG+TGG - chr8_3:67212940-67212959 None:intergenic 45.0%
CATCCTTTGTCATAGGGGAT+TGG - chr8_3:67212974-67212993 None:intergenic 45.0%
AGTTTATTGAGCCGCCAGAA+TGG + chr8_3:67213011-67213030 Msa1303900:three_prime_UTR 45.0%
ATAGTACAACAAAGGGAGGG+TGG - chr8_3:67213064-67213083 None:intergenic 45.0%
!! AAATGTTAAAGAGTGCCCCC+AGG + chr8_3:67213158-67213177 Msa1303900:three_prime_UTR 45.0%
!! AATGTTAAAGAGTGCCCCCA+GGG + chr8_3:67213159-67213178 Msa1303900:three_prime_UTR 45.0%
! TCTAGGGTTAGGGTTTGGAG+AGG - chr8_3:67208328-67208347 None:intergenic 50.0%
GTGAAAAGTGGAACCTGTGG+AGG - chr8_3:67208433-67208452 None:intergenic 50.0%
!! TCGGTGCTACAGAGTAGCTA+AGG - chr8_3:67208630-67208649 None:intergenic 50.0%
!! CGACAGCTAGCTCTGATAGA+AGG + chr8_3:67208647-67208666 Msa1303900:intron 50.0%
! GCTCTGATAGAAGGCGTATC+AGG + chr8_3:67208656-67208675 Msa1303900:intron 50.0%
CACTTATGTCGGTGTGGTGT+CGG - chr8_3:67208685-67208704 None:intergenic 50.0%
GTGTAGTGTCGTATCAGGTC+AGG + chr8_3:67208743-67208762 Msa1303900:intron 50.0%
TTGAGTGGAAATCTGCCTCC+TGG + chr8_3:67209089-67209108 Msa1303900:CDS 50.0%
GTACTCGAATCAAAGCCAGG+AGG - chr8_3:67209107-67209126 None:intergenic 50.0%
!! ATAACTTTGGGGGTGCCATG+TGG - chr8_3:67209363-67209382 None:intergenic 50.0%
GGCTAACAGAGACGAACACA+TGG - chr8_3:67209386-67209405 None:intergenic 50.0%
TGTCGGCAACATTCATCCTC+AGG + chr8_3:67209741-67209760 Msa1303900:CDS 50.0%
GCAGTCATCATATGGCTTCG+TGG + chr8_3:67210050-67210069 Msa1303900:intron 50.0%
GGTCAGAGAGAAGACACATC+AGG + chr8_3:67210249-67210268 Msa1303900:CDS 50.0%
CATCTGTAACCTCGGGACTA+AGG - chr8_3:67210390-67210409 None:intergenic 50.0%
GCAGAGATGCAAGGGTAATG+TGG + chr8_3:67210594-67210613 Msa1303900:intron 50.0%
GTAATGTGGGACCAGAAGAC+AGG + chr8_3:67210608-67210627 Msa1303900:CDS 50.0%
GTGCTTGCCATGCTAATGGT+TGG + chr8_3:67210732-67210751 Msa1303900:intron 50.0%
CTGGAGCTTGCAGCAAGATA+TGG - chr8_3:67210955-67210974 None:intergenic 50.0%
CATCATCAGATCCCCCTAGA+AGG - chr8_3:67211057-67211076 None:intergenic 50.0%
GGAACATCTGGTGAGATCAC+GGG + chr8_3:67211434-67211453 Msa1303900:intron 50.0%
CTTCTCAGGACTGTCATCAC+TGG - chr8_3:67211893-67211912 None:intergenic 50.0%
!! CATTTTCATGCCCTCGGTGT+TGG + chr8_3:67212229-67212248 Msa1303900:CDS 50.0%
AGCAAGAGCTGCTTCACCAT+GGG - chr8_3:67212314-67212333 None:intergenic 50.0%
TAGCAAGAGCTGCTTCACCA+TGG - chr8_3:67212315-67212334 None:intergenic 50.0%
GGCAATGCTCGGTTTCTGTT+TGG + chr8_3:67212343-67212362 Msa1303900:CDS 50.0%
AAGGTAAATGGCCAACTGGC+AGG + chr8_3:67212376-67212395 Msa1303900:intron 50.0%
AGGTAAATGGCCAACTGGCA+GGG + chr8_3:67212377-67212396 Msa1303900:intron 50.0%
ACTGGTACATGCGTAGAAGC+TGG - chr8_3:67212771-67212790 None:intergenic 50.0%
TCATACAATGCAAGACCGGC+AGG - chr8_3:67212807-67212826 None:intergenic 50.0%
ATGAGGCACATGCCGTAAAG+CGG + chr8_3:67212853-67212872 Msa1303900:CDS 50.0%
GCTGAGTGGTGGCAACATTA+GGG - chr8_3:67212926-67212945 None:intergenic 50.0%
TGCTGAGTGGTGGCAACATT+AGG - chr8_3:67212927-67212946 None:intergenic 50.0%
!! GTACATTAGGTGCTGAGTGG+TGG - chr8_3:67212937-67212956 None:intergenic 50.0%
!! TAGCCCTAAAAGAGTGCCCT+GGG - chr8_3:67213178-67213197 None:intergenic 50.0%
!! ATAGCCCTAAAAGAGTGCCC+TGG - chr8_3:67213179-67213198 None:intergenic 50.0%
TCTTCCTCACCCTCTCTTCG+AGG + chr8_3:67208201-67208220 Msa1303900:five_prime_UTR 55.0%
CTTCCTCACCCTCTCTTCGA+GGG + chr8_3:67208202-67208221 Msa1303900:five_prime_UTR 55.0%
AAACCCTCGAAGAGAGGGTG+AGG - chr8_3:67208208-67208227 None:intergenic 55.0%
!! AGTAGGGGCTCTGAAACCTG+AGG - chr8_3:67209760-67209779 None:intergenic 55.0%
!! TCAAGTGCTGGTGCCCTTGA+AGG + chr8_3:67209793-67209812 Msa1303900:CDS 55.0%
!! CAAGTGCTGGTGCCCTTGAA+GGG + chr8_3:67209794-67209813 Msa1303900:CDS 55.0%
ACCAGAAGACAGGCCGATCT+AGG + chr8_3:67210618-67210637 Msa1303900:CDS 55.0%
CCAGAAGACAGGCCGATCTA+GGG + chr8_3:67210619-67210638 Msa1303900:CDS 55.0%
CAGAAGACAGGCCGATCTAG+GGG + chr8_3:67210620-67210639 Msa1303900:CDS 55.0%
AGAAGACAGGCCGATCTAGG+GGG + chr8_3:67210621-67210640 Msa1303900:CDS 55.0%
CATCAGATCCCCCTAGAAGG+TGG - chr8_3:67211054-67211073 None:intergenic 55.0%
TGTTGGCAATCTTGCTCCCG+AGG + chr8_3:67211936-67211955 Msa1303900:CDS 55.0%
AGAGGAGTAGAGGCTGTTCC+TGG - chr8_3:67212741-67212760 None:intergenic 55.0%
!! TGGTGGTGGAAGAGGAGTAG+AGG - chr8_3:67212751-67212770 None:intergenic 55.0%
!! GTAGAAGCTGGTGGTGGAAG+AGG - chr8_3:67212759-67212778 None:intergenic 55.0%
ACATGCGTAGAAGCTGGTGG+TGG - chr8_3:67212765-67212784 None:intergenic 55.0%
GGTACATGCGTAGAAGCTGG+TGG - chr8_3:67212768-67212787 None:intergenic 55.0%
TCTACGCATGTACCAGTGCC+AGG + chr8_3:67212774-67212793 Msa1303900:CDS 55.0%
CTACGCATGTACCAGTGCCA+GGG + chr8_3:67212775-67212794 Msa1303900:CDS 55.0%
TGAGGCACATGCCGTAAAGC+GGG + chr8_3:67212854-67212873 Msa1303900:CDS 55.0%
CCATGGGAATGGGTGCTCTT+GGG + chr8_3:67212880-67212899 Msa1303900:CDS 55.0%
CATGGGAATGGGTGCTCTTG+GGG + chr8_3:67212881-67212900 Msa1303900:CDS 55.0%
!! AGCCCTAAAAGAGTGCCCTG+GGG - chr8_3:67213177-67213196 None:intergenic 55.0%
!! GGGGTGCCATGTGGACGTTT+TGG - chr8_3:67209354-67209373 None:intergenic 60.0%
TGTTGGCGACCTTAGTCCCG+AGG + chr8_3:67210378-67210397 Msa1303900:CDS 60.0%
CCCTAGATCGGCCTGTCTTC+TGG - chr8_3:67210622-67210641 None:intergenic 60.0%
ACAGGCCGATCTAGGGGGTT+TGG + chr8_3:67210626-67210645 Msa1303900:CDS 60.0%
GCAATCTTGCTCCCGAGGCA+AGG + chr8_3:67211941-67211960 Msa1303900:intron 60.0%
GGTAGCAAGCCTACTCCTCC+AGG + chr8_3:67212720-67212739 Msa1303900:CDS 60.0%
GAGGCTGTTCCTGGAGGAGT+AGG - chr8_3:67212732-67212751 None:intergenic 60.0%
GGAGTAGAGGCTGTTCCTGG+AGG - chr8_3:67212738-67212757 None:intergenic 60.0%
GCAGGTGAAAACCCTGGCAC+TGG - chr8_3:67212789-67212808 None:intergenic 60.0%
! GTGCCAGGGTTTTCACCTGC+CGG + chr8_3:67212789-67212808 Msa1303900:CDS 60.0%
AGACCGGCAGGTGAAAACCC+TGG - chr8_3:67212795-67212814 None:intergenic 60.0%
TCCCATGGCTGCCCGCTTTA+CGG - chr8_3:67212868-67212887 None:intergenic 60.0%
AAAGCGGGCAGCCATGGGAA+TGG + chr8_3:67212869-67212888 Msa1303900:CDS 60.0%
AAGCGGGCAGCCATGGGAAT+GGG + chr8_3:67212870-67212889 Msa1303900:CDS 60.0%
GCCATGGGAATGGGTGCTCT+TGG + chr8_3:67212879-67212898 Msa1303900:CDS 60.0%
!! CCCAAGAGCACCCATTCCCA+TGG - chr8_3:67212883-67212902 None:intergenic 60.0%
GAATGGGTGCTCTTGGGGCT+GGG + chr8_3:67212886-67212905 Msa1303900:CDS 60.0%
!! TGCCCCCAGGGCACTCTTTT+AGG + chr8_3:67213171-67213190 Msa1303900:three_prime_UTR 60.0%
!! GCCCCCAGGGCACTCTTTTA+GGG + chr8_3:67213172-67213191 Msa1303900:three_prime_UTR 60.0%
!! GCCCTAAAAGAGTGCCCTGG+GGG - chr8_3:67213176-67213195 None:intergenic 60.0%
GGACTCTGGCTGCTGTGTGC+AGG + chr8_3:67212077-67212096 Msa1303900:intron 65.0%
TGCCGTAAAGCGGGCAGCCA+TGG + chr8_3:67212863-67212882 Msa1303900:CDS 65.0%
GCCGTAAAGCGGGCAGCCAT+GGG + chr8_3:67212864-67212883 Msa1303900:CDS 65.0%
GGAATGGGTGCTCTTGGGGC+TGG + chr8_3:67212885-67212904 Msa1303900:CDS 65.0%
GGTGCTCTTGGGGCTGGGTA+CGG + chr8_3:67212891-67212910 Msa1303900:CDS 65.0%
GTGCTCTTGGGGCTGGGTAC+GGG + chr8_3:67212892-67212911 Msa1303900:CDS 65.0%
TGCTCTTGGGGCTGGGTACG+GGG + chr8_3:67212893-67212912 Msa1303900:CDS 65.0%
CTTGGGGCTGGGTACGGGGC+AGG + chr8_3:67212897-67212916 Msa1303900:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 67208095 67213386 67208095 ID=Msa1303900;Name=Msa1303900
chr8_3 mRNA 67208095 67213386 67208095 ID=Msa1303900-mRNA-1;Parent=Msa1303900;Name=Msa1303900-mRNA-1;_AED=0.07;_eAED=0.07;_QI=260|1|1|1|1|1|12|421|405
chr8_3 exon 67208095 67208438 67208095 ID=Msa1303900-mRNA-1:exon:20548;Parent=Msa1303900-mRNA-1
chr8_3 exon 67209077 67209138 67209077 ID=Msa1303900-mRNA-1:exon:20549;Parent=Msa1303900-mRNA-1
chr8_3 exon 67209738 67209840 67209738 ID=Msa1303900-mRNA-1:exon:20550;Parent=Msa1303900-mRNA-1
chr8_3 exon 67210054 67210130 67210054 ID=Msa1303900-mRNA-1:exon:20551;Parent=Msa1303900-mRNA-1
chr8_3 exon 67210209 67210270 67210209 ID=Msa1303900-mRNA-1:exon:20552;Parent=Msa1303900-mRNA-1
chr8_3 exon 67210362 67210449 67210362 ID=Msa1303900-mRNA-1:exon:20553;Parent=Msa1303900-mRNA-1
chr8_3 exon 67210598 67210673 67210598 ID=Msa1303900-mRNA-1:exon:20554;Parent=Msa1303900-mRNA-1
chr8_3 exon 67210776 67210806 67210776 ID=Msa1303900-mRNA-1:exon:20555;Parent=Msa1303900-mRNA-1
chr8_3 exon 67211324 67211443 67211324 ID=Msa1303900-mRNA-1:exon:20556;Parent=Msa1303900-mRNA-1
chr8_3 exon 67211872 67211957 67211872 ID=Msa1303900-mRNA-1:exon:20557;Parent=Msa1303900-mRNA-1
chr8_3 exon 67212205 67212378 67212205 ID=Msa1303900-mRNA-1:exon:20558;Parent=Msa1303900-mRNA-1
chr8_3 exon 67212711 67213386 67212711 ID=Msa1303900-mRNA-1:exon:20559;Parent=Msa1303900-mRNA-1
chr8_3 five_prime_UTR 67208095 67208354 67208095 ID=Msa1303900-mRNA-1:five_prime_utr;Parent=Msa1303900-mRNA-1
chr8_3 CDS 67208355 67208438 67208355 ID=Msa1303900-mRNA-1:cds;Parent=Msa1303900-mRNA-1
chr8_3 CDS 67209077 67209138 67209077 ID=Msa1303900-mRNA-1:cds;Parent=Msa1303900-mRNA-1
chr8_3 CDS 67209738 67209840 67209738 ID=Msa1303900-mRNA-1:cds;Parent=Msa1303900-mRNA-1
chr8_3 CDS 67210054 67210130 67210054 ID=Msa1303900-mRNA-1:cds;Parent=Msa1303900-mRNA-1
chr8_3 CDS 67210209 67210270 67210209 ID=Msa1303900-mRNA-1:cds;Parent=Msa1303900-mRNA-1
chr8_3 CDS 67210362 67210449 67210362 ID=Msa1303900-mRNA-1:cds;Parent=Msa1303900-mRNA-1
chr8_3 CDS 67210598 67210673 67210598 ID=Msa1303900-mRNA-1:cds;Parent=Msa1303900-mRNA-1
chr8_3 CDS 67210776 67210806 67210776 ID=Msa1303900-mRNA-1:cds;Parent=Msa1303900-mRNA-1
chr8_3 CDS 67211324 67211443 67211324 ID=Msa1303900-mRNA-1:cds;Parent=Msa1303900-mRNA-1
chr8_3 CDS 67211872 67211957 67211872 ID=Msa1303900-mRNA-1:cds;Parent=Msa1303900-mRNA-1
chr8_3 CDS 67212205 67212378 67212205 ID=Msa1303900-mRNA-1:cds;Parent=Msa1303900-mRNA-1
chr8_3 CDS 67212711 67212965 67212711 ID=Msa1303900-mRNA-1:cds;Parent=Msa1303900-mRNA-1
chr8_3 three_prime_UTR 67212966 67213386 67212966 ID=Msa1303900-mRNA-1:three_prime_utr;Parent=Msa1303900-mRNA-1
Gene Sequence

>Msa1303900

ATGTTGCCACAGAAGTTTAGGCAGAATCCTCTGATTCAGCAACACTCTCTCTACCAACACCCTGCTCTTATTAATCCTCCACAGATAGAGCCTATCTTGAGTGGAAATCTGCCTCCTGGCTTTGATTCGAGTACTTGCCGCAGTGTTTATGTCGGCAACATTCATCCTCAGGTTTCAGAGCCCCTACTTCAAGAGCTGTTTTCAAGTGCTGGTGCCCTTGAAGGGTGCAAGCTTATTCGAAAAGAAAAGTCATCATATGGCTTCGTGGACTACTTTGATCGCAGTTCAGCTGCAATTGCTATTGTGACTCTCAATGGGAGGAACATTTTTGGGCAGTCTATCAAAGTTAACTGGGCTTATACTCGTGGTCAGAGAGAAGACACATCAGGACACTTCCATATTTTTGTTGGCGACCTTAGTCCCGAGGTTACAGATGCAACTCTGTATGCTTGCTTCTCTGCGTATTCTAGTTGCTCAGATGCAAGGGTAATGTGGGACCAGAAGACAGGCCGATCTAGGGGGTTTGGATTTGTTTCTTTTCGAAATCAGCAGGAAGCCCAAAGTGCCATAAACGATTTAACTGGTAAATGGCTTGGAAGTAGACAGATCCGTTGTAATTGGGCCACAAAAGGAGCTAATATCAATGGTGAAAATCAGAGTTCAGAGTCCAAAAGTGTTGTGGAGTTAACTAGTGGAACATCTGAAGAAGCGCAGGAAATGACCAGTGATGACAGTCCTGAGAAGAATCCTCAATATACCACTGTTTATGTTGGCAATCTTGCTCCCGAGGTTACTACTGTTGATCTCCATCATCATTTTCATGCCCTCGGTGTTGGAACTATTGAAGATGTTAGGGTGCAACGAGACAAAAGTTTTGGGTTTGTGAGATACAGTACCCATGGTGAAGCAGCTCTTGCTATACAGATGGGCAATGCTCGGTTTCTGTTTGGCAAACCTATCAAGTGTTCATGGGGTAGCAAGCCTACTCCTCCAGGAACAGCCTCTACTCCTCTTCCACCACCAGCTTCTACGCATGTACCAGTGCCAGGGTTTTCACCTGCCGGTCTTGCATTGTATGAACGCCAGTTGGCTTTGAGCAAAATGAATGAGGCACATGCCGTAAAGCGGGCAGCCATGGGAATGGGTGCTCTTGGGGCTGGGTACGGGGCAGGATTCCCTAATGTTGCCACCACTCAGCACCTAATGTACTACCAGTAA
Protein sequence

>Msa1303900

MLPQKFRQNPLIQQHSLYQHPALINPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVSEPLLQELFSSAGALEGCKLIRKEKSSYGFVDYFDRSSAAIAIVTLNGRNIFGQSIKVNWAYTRGQREDTSGHFHIFVGDLSPEVTDATLYACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIRCNWATKGANINGENQSSESKSVVELTSGTSEEAQEMTSDDSPEKNPQYTTVYVGNLAPEVTTVDLHHHFHALGVGTIEDVRVQRDKSFGFVRYSTHGEAALAIQMGNARFLFGKPIKCSWGSKPTPPGTASTPLPPPASTHVPVPGFSPAGLALYERQLALSKMNEAHAVKRAAMGMGALGAGYGAGFPNVATTQHLMYYQ*