AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1363040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1363040 MtrunA17_Chr4g0070231 98.025 405 7 1 1 405 1 404 0.0 831
Msa1363040 MtrunA17_Chr8g0344491 72.319 401 95 5 16 405 32 427 0.0 575
Msa1363040 MtrunA17_Chr3g0139111 59.322 413 143 5 18 405 28 440 1.17e-177 502
Msa1363040 MtrunA17_Chr4g0074711 28.099 363 214 9 27 359 54 399 7.92e-38 141
Msa1363040 MtrunA17_Chr2g0288251 31.353 303 179 7 46 337 59 343 1.76e-37 140
Msa1363040 MtrunA17_Chr2g0328791 31.922 307 190 8 46 339 14 314 6.26e-36 136
Msa1363040 MtrunA17_Chr4g0045221 30.640 297 188 8 46 328 115 407 9.48e-36 136
Msa1363040 MtrunA17_Chr1g0153871 29.553 291 177 7 47 328 97 368 7.54e-35 133
Msa1363040 MtrunA17_Chr1g0153871 27.660 188 110 4 40 207 183 364 1.18e-14 75.5
Msa1363040 MtrunA17_Chr3g0133651 29.766 299 181 7 40 328 86 365 7.66e-34 130
Msa1363040 MtrunA17_Chr3g0133651 25.269 186 113 4 48 213 188 367 6.74e-11 63.5
Msa1363040 MtrunA17_Chr3g0110211 33.166 199 125 4 48 241 26 221 1.68e-30 120
Msa1363040 MtrunA17_Chr3g0110211 24.623 199 109 4 135 327 28 191 2.41e-13 70.9
Msa1363040 MtrunA17_Chr1g0153181 26.333 300 191 8 39 327 112 392 7.39e-22 97.8
Msa1363040 MtrunA17_Chr1g0153181 25.321 312 186 8 11 313 1 274 2.45e-21 96.3
Msa1363040 MtrunA17_Chr3g0134141 27.863 262 147 7 45 297 22 250 1.33e-21 97.1
Msa1363040 MtrunA17_Chr3g0134141 27.273 308 191 9 32 327 97 383 1.53e-17 84.7
Msa1363040 MtrunA17_Chr6g0466501 26.199 271 158 6 48 311 26 261 1.50e-21 97.1
Msa1363040 MtrunA17_Chr6g0466501 23.630 292 187 7 48 327 114 381 4.95e-15 77.0
Msa1363040 MtrunA17_Chr6g0465751 25.830 271 159 6 48 311 26 261 1.88e-21 96.7
Msa1363040 MtrunA17_Chr6g0465751 23.630 292 187 7 48 327 114 381 6.81e-15 76.6
Msa1363040 MtrunA17_Chr4g0044541 25.733 307 197 8 32 327 107 393 3.77e-21 95.9
Msa1363040 MtrunA17_Chr4g0044541 25.714 280 166 7 48 318 35 281 1.48e-20 94.0
Msa1363040 MtrunA17_Chr7g0265341 24.606 317 182 8 20 327 58 326 7.64e-21 94.7
Msa1363040 MtrunA17_Chr7g0265341 25.667 300 192 7 39 327 150 429 1.74e-19 90.9
Msa1363040 MtrunA17_Chr3g0116631 33.140 172 103 2 49 208 111 282 7.71e-20 89.0
Msa1363040 MtrunA17_Chr6g0465631 26.333 300 176 9 39 320 7 279 1.18e-18 87.8
Msa1363040 MtrunA17_Chr6g0466451 26.333 300 176 9 39 320 7 279 1.26e-18 87.8
Msa1363040 MtrunA17_Chr1g0179701 25.256 293 180 8 48 327 151 417 1.89e-18 87.4
Msa1363040 MtrunA17_Chr1g0179701 24.549 277 166 8 48 314 63 306 9.70e-18 85.1
Msa1363040 MtrunA17_Chr1g0201151 26.007 273 160 8 48 311 31 270 1.33e-17 85.1
Msa1363040 MtrunA17_Chr1g0201151 23.934 305 192 7 32 320 103 383 3.48e-16 80.5
Msa1363040 MtrunA17_Chr4g0058151 32.353 170 104 3 49 208 124 292 1.86e-17 82.4
Msa1363040 MtrunA17_Chr3g0087481 29.834 181 113 2 42 208 55 235 1.45e-16 78.6
Msa1363040 MtrunA17_Chr3g0087481 28.866 194 112 3 134 323 62 233 2.31e-15 75.1
Msa1363040 MtrunA17_Chr0c09g0493511 23.630 292 187 7 48 327 32 299 2.03e-16 81.3
Msa1363040 MtrunA17_Chr6g0465691 23.630 292 187 7 48 327 32 299 4.43e-15 77.0
Msa1363040 MtrunA17_Chr1g0181111 28.877 187 106 2 49 208 86 272 1.34e-14 73.6
Msa1363040 MtrunA17_Chr4g0061451 42.857 77 44 0 134 210 44 120 2.38e-14 72.8
Msa1363040 MtrunA17_Chr7g0219021 40.506 79 47 0 134 212 42 120 4.16e-14 71.6
Msa1363040 MtrunA17_Chr1g0177101 25.000 192 130 3 32 209 93 284 5.82e-14 72.4
Msa1363040 MtrunA17_Chr3g0121631 44.000 75 41 1 134 208 38 111 2.78e-13 67.0
Msa1363040 MtrunA17_Chr7g0267571 25.714 210 123 6 133 331 110 297 3.73e-13 70.1
Msa1363040 MtrunA17_Chr7g0267571 24.651 215 136 4 49 245 111 317 2.35e-12 67.4
Msa1363040 MtrunA17_Chr3g0119311 41.333 75 44 0 134 208 38 112 3.79e-13 66.2
Msa1363040 MtrunA17_Chr1g0190211 37.838 74 46 0 132 205 132 205 5.40e-13 68.2
Msa1363040 MtrunA17_Chr7g0266751 38.961 77 47 0 132 208 32 108 1.01e-12 65.1
Msa1363040 MtrunA17_Chr4g0033701 25.260 289 184 9 42 319 21 288 1.85e-12 69.3
Msa1363040 MtrunA17_Chr3g0086861 40.260 77 46 0 134 210 46 122 7.14e-12 66.6
Msa1363040 MtrunA17_Chr1g0186351 26.562 192 112 5 49 213 8 197 1.31e-11 66.2
Msa1363040 MtrunA17_Chr1g0168601 30.631 111 75 1 100 208 119 229 1.88e-11 63.5
Msa1363040 MtrunA17_Chr4g0035001 38.462 78 48 0 131 208 5 82 2.62e-11 61.6
Msa1363040 MtrunA17_Chr5g0447761 27.830 212 122 8 134 338 8 195 4.10e-11 64.7
Msa1363040 MtrunA17_Chr5g0447761 26.705 176 106 5 44 198 3 176 4.25e-11 64.3
Msa1363040 MtrunA17_Chr4g0035051 35.443 79 51 0 132 210 8 86 5.04e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1363040 AT1G17370.1 69.900 402 103 6 16 405 24 419 0.0 550
Msa1363040 AT3G14100.1 69.154 402 109 5 16 405 29 427 0.0 549
Msa1363040 AT1G17370.2 69.403 402 102 7 16 405 24 416 0.0 541
Msa1363040 AT1G54080.1 65.672 402 129 5 11 405 27 426 0.0 533
Msa1363040 AT1G54080.2 65.025 406 129 6 11 405 27 430 0.0 528
Msa1363040 AT5G19350.1 31.111 315 203 8 22 328 2 310 1.03e-38 144
Msa1363040 AT5G19350.2 30.476 315 201 8 22 328 2 306 2.12e-37 140
Msa1363040 AT4G27000.1 31.164 292 173 7 47 329 80 352 1.35e-36 138
Msa1363040 AT1G11650.2 29.154 319 190 8 20 329 44 335 8.25e-35 133
Msa1363040 AT3G19130.1 29.252 294 193 7 46 329 107 395 1.13e-34 133
Msa1363040 AT5G54900.1 29.836 305 185 9 35 329 49 334 1.41e-34 132
Msa1363040 AT1G49600.3 29.932 294 184 9 46 328 118 400 2.18e-32 127
Msa1363040 AT1G49600.2 29.932 294 184 9 46 328 118 400 2.18e-32 127
Msa1363040 AT1G49600.1 29.831 295 185 9 46 329 118 401 2.69e-32 127
Msa1363040 AT1G47490.1 30.612 294 175 9 47 328 101 377 1.01e-30 122
Msa1363040 AT1G47490.1 25.532 188 112 4 48 213 198 379 1.33e-11 66.2
Msa1363040 AT1G11650.1 28.819 288 169 8 20 298 44 304 8.55e-30 117
Msa1363040 AT2G18510.1 33.166 199 125 4 48 241 26 221 1.42e-28 115
Msa1363040 AT1G47500.1 30.272 294 176 10 47 328 103 379 3.58e-28 115
Msa1363040 AT1G47500.1 26.064 188 111 4 48 213 200 381 8.55e-12 67.0
Msa1363040 AT3G16380.1 28.114 281 175 6 48 320 113 374 1.26e-24 106
Msa1363040 AT3G16380.1 26.871 294 159 10 48 321 22 279 1.26e-17 85.1
Msa1363040 AT2G23350.1 29.210 291 175 8 48 327 135 405 3.48e-24 105
Msa1363040 AT2G23350.1 26.182 275 161 7 48 313 47 288 4.44e-18 87.0
Msa1363040 AT2G23350.1 25.668 187 120 4 42 210 220 405 3.58e-13 71.6
Msa1363040 AT1G49760.1 27.907 301 184 9 39 327 125 404 3.66e-24 105
Msa1363040 AT1G49760.1 26.909 275 159 7 48 313 46 287 4.70e-20 92.8
Msa1363040 AT1G49760.2 27.907 301 184 9 39 327 125 404 3.66e-24 105
Msa1363040 AT1G49760.2 26.909 275 159 7 48 313 46 287 4.70e-20 92.8
Msa1363040 AT1G71770.1 27.574 272 158 7 48 311 60 300 2.50e-23 102
Msa1363040 AT1G71770.1 27.893 337 199 10 32 343 131 448 1.29e-20 94.7
Msa1363040 AT1G71770.2 27.574 272 158 7 48 311 60 300 2.50e-23 102
Msa1363040 AT1G71770.2 27.893 337 199 10 32 343 131 448 1.29e-20 94.7
Msa1363040 AT4G34110.1 26.333 300 190 7 39 327 116 395 5.25e-23 101
Msa1363040 AT4G34110.1 27.839 273 155 7 48 311 37 276 3.78e-21 96.3
Msa1363040 AT1G34140.1 28.169 284 181 6 48 325 32 298 9.63e-23 99.8
Msa1363040 AT1G22760.1 26.471 272 161 7 48 311 50 290 1.10e-22 100
Msa1363040 AT1G22760.1 25.962 312 192 6 32 327 121 409 3.11e-18 87.4
Msa1363040 AT1G47490.2 33.714 175 104 6 47 209 101 275 3.05e-22 96.7
Msa1363040 AT4G24770.1 33.333 171 105 2 49 210 152 322 3.91e-21 94.0
Msa1363040 AT4G24770.2 33.333 171 105 2 49 210 152 322 3.91e-21 94.0
Msa1363040 AT1G47500.2 33.714 175 104 6 47 209 103 277 1.43e-20 92.0
Msa1363040 AT5G50250.1 34.503 171 103 2 49 210 115 285 1.66e-20 91.3
Msa1363040 AT2G36660.1 25.260 289 187 7 48 327 113 381 1.14e-18 88.6
Msa1363040 AT2G36660.1 24.176 273 163 6 48 311 25 262 1.74e-17 85.1
Msa1363040 AT2G36660.1 25.214 234 144 6 48 262 202 423 1.84e-11 66.2
Msa1363040 AT2G37220.1 31.383 188 101 3 49 208 93 280 1.60e-18 85.5
Msa1363040 AT3G52150.2 29.630 189 115 4 38 208 65 253 3.38e-16 78.2
Msa1363040 AT3G52150.2 29.231 195 114 6 133 323 77 251 2.40e-14 72.8
Msa1363040 AT3G52150.1 29.630 189 115 4 38 208 65 253 3.38e-16 78.2
Msa1363040 AT3G52150.1 29.231 195 114 6 133 323 77 251 2.40e-14 72.8
Msa1363040 AT1G60000.1 30.208 192 116 4 22 208 75 253 3.58e-16 78.2
Msa1363040 AT3G23830.2 46.154 78 42 0 133 210 36 113 8.45e-16 74.3
Msa1363040 AT3G23830.1 46.154 78 42 0 133 210 36 113 8.45e-16 74.3
Msa1363040 AT4G13860.1 45.714 70 38 0 134 203 5 74 3.85e-15 70.9
Msa1363040 AT4G13850.3 45.205 73 40 0 134 206 37 109 1.47e-14 70.9
Msa1363040 AT4G13850.2 45.205 73 40 0 134 206 37 109 1.81e-14 70.9
Msa1363040 AT4G13850.1 45.205 73 40 0 134 206 37 109 2.03e-14 70.9
Msa1363040 AT4G13850.4 45.333 75 41 0 134 208 37 111 2.50e-14 69.7
Msa1363040 AT3G52380.1 26.111 180 115 3 49 210 118 297 5.29e-14 73.2
Msa1363040 AT5G04280.1 41.111 90 52 1 133 221 8 97 2.74e-13 70.5
Msa1363040 AT2G33410.1 30.857 175 94 5 49 198 8 180 9.89e-13 69.7
Msa1363040 AT3G53460.1 44.737 76 42 0 133 208 258 333 1.07e-12 69.3
Msa1363040 AT3G53460.3 44.737 76 42 0 133 208 258 333 1.07e-12 69.3
Msa1363040 AT3G53460.2 44.737 76 42 0 133 208 258 333 1.07e-12 69.3
Msa1363040 AT3G04500.1 32.632 95 61 1 132 223 137 231 1.10e-12 67.8
Msa1363040 AT3G53460.4 44.737 76 42 0 133 208 279 354 1.45e-12 68.9
Msa1363040 AT1G74230.1 44.156 77 42 1 134 210 36 111 2.44e-12 67.4
Msa1363040 AT5G61030.2 39.474 76 46 0 133 208 41 116 3.26e-12 67.4
Msa1363040 AT5G61030.1 39.474 76 46 0 133 208 41 116 3.26e-12 67.4
Msa1363040 AT4G39260.3 36.047 86 54 1 132 216 6 91 3.34e-12 62.8
Msa1363040 AT2G43410.4 24.870 193 110 7 46 209 94 280 4.83e-12 68.6
Msa1363040 AT2G43410.3 24.870 193 110 7 46 209 94 280 4.83e-12 68.6
Msa1363040 AT2G43410.2 24.870 193 110 7 46 209 94 280 4.83e-12 68.6
Msa1363040 AT4G39260.2 37.662 77 48 0 132 208 6 82 5.91e-12 63.2
Msa1363040 AT3G08000.1 37.662 77 48 0 134 210 43 119 1.40e-11 62.4
Msa1363040 AT4G39260.1 36.842 76 48 0 131 206 5 80 4.23e-11 61.6
Msa1363040 AT2G21660.2 36.842 76 48 0 131 206 7 82 4.37e-11 61.6
Msa1363040 AT4G14300.1 28.000 175 99 5 49 198 8 180 4.63e-11 64.7
Msa1363040 AT4G14300.2 28.000 175 99 5 49 198 8 180 4.63e-11 64.7
Msa1363040 AT2G21660.1 36.842 76 48 0 131 206 7 82 6.07e-11 61.6
Msa1363040 AT5G47320.1 40.000 75 45 0 134 208 33 107 8.77e-11 61.6

Find 171 sgRNAs with CRISPR-Local

Find 374 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTACCAGTTAAATCGTTTA+TGG 0.111838 tig0018025:-80611 None:intergenic
TGTATTACTACATTTAAATA+AGG 0.191590 tig0018025:+82957 Msa1363040:three_prime_UTR
TTTCTGATACTTCAGGTAAA+TGG 0.225225 tig0018025:+81131 Msa1363040:intron
GTGGCAACATCTTCAGTTCT+AGG 0.231542 tig0018025:-78132 None:intergenic
GTGTAAGCTCTTTGTGAATA+AGG 0.248325 tig0018025:+83096 Msa1363040:three_prime_UTR
GCCATGGGAATGGGTGCTCT+TGG 0.248648 tig0018025:+82702 Msa1363040:CDS
CCATGGGAATGGGTGCTCTT+GGG 0.253064 tig0018025:+82703 Msa1363040:CDS
GGCAGTCTATCAAAGTTAAC+TGG 0.257739 tig0018025:+80027 Msa1363040:CDS
GTGCTCTTGGGGCTGGGTAC+GGG 0.261923 tig0018025:+82715 Msa1363040:CDS
TCCCATGGCTGCCCGCTTTA+CGG 0.262872 tig0018025:-82688 None:intergenic
GGAATGGGTGCTCTTGGGGC+TGG 0.265291 tig0018025:+82708 Msa1363040:CDS
AGTTAACTCCACAACACTTT+TGG 0.276006 tig0018025:-81230 None:intergenic
GATGATACAGAATTGTTGTT+AGG 0.282363 tig0018025:-77944 None:intergenic
GTGCAACGAGACAAAAGTTT+TGG 0.288822 tig0018025:+82094 Msa1363040:CDS
GTAGACAGATCCGTTGTAAT+TGG 0.289688 tig0018025:+81161 Msa1363040:CDS
CCCTAGATCGGCCTGTCTTC+TGG 0.289831 tig0018025:-80432 None:intergenic
ACATCTTCAGTTCTAGGGTT+AGG 0.304136 tig0018025:-78126 None:intergenic
ATATTACTGAGCCAGGATTT+AGG 0.314602 tig0018025:+83050 Msa1363040:three_prime_UTR
GGTGCTCTTGGGGCTGGGTA+CGG 0.320968 tig0018025:+82714 Msa1363040:CDS
TGCTGAGTGGTGGCAACATT+AGG 0.328886 tig0018025:-82747 None:intergenic
ATAAACACATCCTTTGTCAT+AGG 0.331362 tig0018025:-82801 None:intergenic
TTGGAACTATTGAAGATGTT+AGG 0.337285 tig0018025:+82071 Msa1363040:CDS
AGAGGAGTAGAGGCTGTTCC+TGG 0.344903 tig0018025:-82561 None:intergenic
TGCTCTTGGGGCTGGGTACG+GGG 0.349762 tig0018025:+82716 Msa1363040:CDS
TAAATCGTTTATGGCACTTT+GGG 0.357578 tig0018025:-80602 None:intergenic
AGATGTTGCCACAGAAGTTT+AGG 0.367616 tig0018025:+78143 Msa1363040:exon
GGCAATGCTCGGTTTCTGTT+TGG 0.367861 tig0018025:+82166 Msa1363040:CDS
AGTTGGCCATTTACCTTGAT+AGG 0.368076 tig0018025:-82193 None:intergenic
TCAAGTGCTGGTGCCCTTGA+AGG 0.378286 tig0018025:+79606 Msa1363040:CDS
CATGGGAATGGGTGCTCTTG+GGG 0.379768 tig0018025:+82704 Msa1363040:CDS
ATTTGGTTAGGTAAGGGATA+TGG 0.382238 tig0018025:+83074 Msa1363040:three_prime_UTR
CTTGGGGCTGGGTACGGGGC+AGG 0.383014 tig0018025:+82720 Msa1363040:CDS
GTATTACTACATTTAAATAA+GGG 0.383143 tig0018025:+82958 Msa1363040:three_prime_UTR
GAATGGGTGCTCTTGGGGCT+GGG 0.388523 tig0018025:+82709 Msa1363040:CDS
GTTTGGAGAGGTAATAGAAA+TGG 0.392212 tig0018025:-78103 None:intergenic
CATCTTCAGTTCTAGGGTTA+GGG 0.396307 tig0018025:-78125 None:intergenic
TCAGTTCTAGGGTTAGGGTT+TGG 0.405769 tig0018025:-78120 None:intergenic
GAATAAGCTTGCACCCTTCA+AGG 0.408901 tig0018025:-79620 None:intergenic
TGAGCCAGGATTTAGGCATT+TGG 0.412268 tig0018025:+83057 Msa1363040:three_prime_UTR
TGTAAGCTCTTTGTGAATAA+GGG 0.413107 tig0018025:+83097 Msa1363040:three_prime_UTR
ACCAGAAGACAGGCCGATCT+AGG 0.413231 tig0018025:+80431 Msa1363040:CDS
AGTAGTAGTATAGTATTAAA+CGG 0.417418 tig0018025:+77895 Msa1363040:five_prime_UTR
GCTGAGTGGTGGCAACATTA+GGG 0.418535 tig0018025:-82746 None:intergenic
TTTAGGCATTTGGTTAGGTA+AGG 0.422583 tig0018025:+83067 Msa1363040:three_prime_UTR
TCTGTTTGGCAAACCTATCA+AGG 0.428539 tig0018025:+82180 Msa1363040:CDS
TGCCGTAAAGCGGGCAGCCA+TGG 0.435035 tig0018025:+82686 Msa1363040:CDS
AGTGCCATAAACGATTTAAC+TGG 0.439194 tig0018025:+80607 Msa1363040:CDS
ATGATACAGAATTGTTGTTA+GGG 0.445579 tig0018025:-77943 None:intergenic
CAGGATTTAGGCATTTGGTT+AGG 0.447520 tig0018025:+83062 Msa1363040:three_prime_UTR
TCTTCCTCACCCTCTCTTCG+AGG 0.453680 tig0018025:+77994 Msa1363040:five_prime_UTR
TGTCGGCAACATTCATCCTC+AGG 0.453788 tig0018025:+79554 Msa1363040:CDS
TTAAATCGTTTATGGCACTT+TGG 0.455208 tig0018025:-80603 None:intergenic
CTTCCTCACCCTCTCTTCGA+GGG 0.457725 tig0018025:+77995 Msa1363040:five_prime_UTR
TAGACAGATCCGTTGTAATT+GGG 0.464335 tig0018025:+81162 Msa1363040:CDS
TGTCATCTGCAGTCATCATA+TGG 0.465231 tig0018025:+79855 Msa1363040:intron
CGTTGTAATTGGGCCACAAA+AGG 0.466676 tig0018025:+81172 Msa1363040:CDS
CATCCTTTGTCATAGGGGAT+TGG 0.468207 tig0018025:-82794 None:intergenic
GTATATTGAGGATTCTTCTC+AGG 0.470583 tig0018025:-81726 None:intergenic
TCTACGCATGTACCAGTGCC+AGG 0.473075 tig0018025:+82597 Msa1363040:CDS
TTTGGAGAGGTAATAGAAAT+GGG 0.474414 tig0018025:-78102 None:intergenic
GATACTTCAGGTAAATGGCT+TGG 0.477931 tig0018025:+81136 Msa1363040:intron
AAGCGGGCAGCCATGGGAAT+GGG 0.480383 tig0018025:+82693 Msa1363040:CDS
TCATTATATATTACTGAGCC+AGG 0.481347 tig0018025:+83043 Msa1363040:three_prime_UTR
AAAGCGGGCAGCCATGGGAA+TGG 0.483227 tig0018025:+82692 Msa1363040:CDS
CATCTGTAACCTCGGGACTA+AGG 0.485132 tig0018025:-80200 None:intergenic
TGAAATTTGCATACAGATGA+GGG 0.486100 tig0018025:+83128 Msa1363040:three_prime_UTR
ATTGCTATTGTGACTCTCAA+TGG 0.491515 tig0018025:+79912 Msa1363040:CDS
GATTAATAAGAGCAGGGTGT+TGG 0.494163 tig0018025:-78198 None:intergenic
CAGAGTTGCATCTGTAACCT+CGG 0.497849 tig0018025:-80208 None:intergenic
AGTTTATTGAGCCGCTAGAA+TGG 0.497991 tig0018025:+82834 Msa1363040:three_prime_UTR
CCAGAAGACAGGCCGATCTA+GGG 0.498360 tig0018025:+80432 Msa1363040:CDS
CAAGTGCTGGTGCCCTTGAA+GGG 0.498365 tig0018025:+79607 Msa1363040:CDS
TTGAAAACAGCTCTTGAAGT+AGG 0.498626 tig0018025:-79587 None:intergenic
GGCAGATTTCCACTCAAGAT+AGG 0.499163 tig0018025:-78896 None:intergenic
TGAAAACAGCTCTTGAAGTA+GGG 0.501288 tig0018025:-79586 None:intergenic
TTGCTATTGTGACTCTCAAT+GGG 0.502486 tig0018025:+79913 Msa1363040:CDS
TGCTCTTATTAATCCTCCAC+AGG 0.502530 tig0018025:+78207 Msa1363040:CDS
TAAACACATCCTTTGTCATA+GGG 0.505368 tig0018025:-82800 None:intergenic
GGTAGCAAGCCTACTCCTCC+AGG 0.506780 tig0018025:+82543 Msa1363040:CDS
TGTGGAGGATTAATAAGAGC+AGG 0.507159 tig0018025:-78205 None:intergenic
AAAAGACAGACAATAGAAAG+AGG 0.507207 tig0018025:-77972 None:intergenic
TGGCAACATCTTCAGTTCTA+GGG 0.507895 tig0018025:-78131 None:intergenic
GAGGCTGTTCCTGGAGGAGT+AGG 0.509965 tig0018025:-82552 None:intergenic
TTGAAATTTGCATACAGATG+AGG 0.511061 tig0018025:+83127 Msa1363040:three_prime_UTR
CAAGCTTATTCGAAAAGAAA+AGG 0.511179 tig0018025:+79632 Msa1363040:CDS
CAATATACCACTGTTTATGT+TGG 0.511712 tig0018025:+81741 Msa1363040:CDS
CTTCTCAGGACTGTCATCAC+TGG 0.513827 tig0018025:-81712 None:intergenic
GTAATGTGGGACCAGAAGAC+AGG 0.513950 tig0018025:+80421 Msa1363040:CDS
CAAGTACTCGAATCAAAGCC+AGG 0.514270 tig0018025:-78920 None:intergenic
TTGAGTGGAAATCTGCCTCC+TGG 0.517070 tig0018025:+78902 Msa1363040:CDS
AAAGAGAAAAGAAAATAAGA+AGG 0.517982 tig0018025:-78061 None:intergenic
TGAGGCACATGCCGTAAAGC+GGG 0.519673 tig0018025:+82677 Msa1363040:CDS
ATAGAAAATAGTACAACAAA+GGG 0.520818 tig0018025:-82891 None:intergenic
GTAGAAGCTGGTGGTGGAAG+AGG 0.523058 tig0018025:-82579 None:intergenic
CAGAAGACAGGCCGATCTAG+GGG 0.524639 tig0018025:+80433 Msa1363040:CDS
GAGTTAACTAGTGGAACATC+TGG 0.525972 tig0018025:+81244 Msa1363040:CDS
AATAAGCTTGCACCCTTCAA+GGG 0.526793 tig0018025:-79619 None:intergenic
CTAACCAAATGCCTAAATCC+TGG 0.530973 tig0018025:-83061 None:intergenic
TCATACAATGCAAGACCGGC+AGG 0.531526 tig0018025:-82627 None:intergenic
GGCTTTGAGCAAAATGAATG+AGG 0.532599 tig0018025:+82659 Msa1363040:CDS
GCCGTAAAGCGGGCAGCCAT+GGG 0.532748 tig0018025:+82687 Msa1363040:CDS
GCAGGTGAAAACCCTGGCAC+TGG 0.532863 tig0018025:-82609 None:intergenic
CTATACAGATGGGCAATGCT+CGG 0.533465 tig0018025:+82155 Msa1363040:CDS
GCAGTCATCATATGGCTTCG+TGG 0.534797 tig0018025:+79863 Msa1363040:intron
TAGCCCTAAAAGAGTGCCCT+GGG 0.535174 tig0018025:-82998 None:intergenic
CGAGGGCATGAAAATGATGA+TGG 0.536381 tig0018025:-82045 None:intergenic
AAGCATAAAGAAACTACAAA+AGG 0.536917 tig0018025:-82926 None:intergenic
TGGAACTATTGAAGATGTTA+GGG 0.538403 tig0018025:+82072 Msa1363040:CDS
ATAGCCCTAAAAGAGTGCCC+TGG 0.539964 tig0018025:-82999 None:intergenic
CCCAAGAGCACCCATTCCCA+TGG 0.540481 tig0018025:-82703 None:intergenic
ACAAAAGGAGCTAATATCAA+TGG 0.540541 tig0018025:+81187 Msa1363040:CDS
AGCAGCTCTTGCTATACAGA+TGG 0.541824 tig0018025:+82144 Msa1363040:CDS
TTGGGGAAATGCAGTTATGT+CGG 0.542976 tig0018025:+79537 Msa1363040:intron
TTAGGCATTTGGTTAGGTAA+GGG 0.545438 tig0018025:+83068 Msa1363040:three_prime_UTR
TGGTTTGTTGCAGAGATGCA+AGG 0.548391 tig0018025:+80398 Msa1363040:intron
CAGATAGAGCCTATCTTGAG+TGG 0.550585 tig0018025:+78887 Msa1363040:intron
TTCAGAGTCCAAAAGTGTTG+TGG 0.550682 tig0018025:+81222 Msa1363040:CDS
TATCCAATCCCCTATGACAA+AGG 0.552526 tig0018025:+82791 Msa1363040:three_prime_UTR
AGAGAGTGTTGCTGAATCAG+AGG 0.559825 tig0018025:-78172 None:intergenic
AGCAAGAGCTGCTTCACCAT+GGG 0.563783 tig0018025:-82134 None:intergenic
ACATAAACAGTGGTATATTG+AGG 0.570472 tig0018025:-81738 None:intergenic
TGCATTGTATGAACGCCAGT+TGG 0.572674 tig0018025:+82638 Msa1363040:CDS
AAACCCTCGAAGAGAGGGTG+AGG 0.574160 tig0018025:-77998 None:intergenic
AATAGAAAATAGTACAACAA+AGG 0.576697 tig0018025:-82892 None:intergenic
GGTTTGTTGCAGAGATGCAA+GGG 0.576728 tig0018025:+80399 Msa1363040:intron
GGTCAGAGAGAAGACACATC+AGG 0.578022 tig0018025:+80062 Msa1363040:CDS
GATACAGAATTGTTGTTAGG+GGG 0.579271 tig0018025:-77941 None:intergenic
GAAAATAGTACAACAAAGGG+AGG 0.580082 tig0018025:-82888 None:intergenic
GCGTTCATACAATGCAAGAC+CGG 0.582208 tig0018025:-82631 None:intergenic
AGAGTTGCATCTGTAACCTC+GGG 0.585816 tig0018025:-80207 None:intergenic
CAGAGATGCAAGGGTAATGT+GGG 0.590138 tig0018025:+80408 Msa1363040:intron
GCAGTCTATCAAAGTTAACT+GGG 0.592742 tig0018025:+80028 Msa1363040:CDS
TGGTGGTGGAAGAGGAGTAG+AGG 0.594572 tig0018025:-82571 None:intergenic
GTGAAAAGTGGAACCTGTGG+AGG 0.597511 tig0018025:-78220 None:intergenic
TGTTGGCAATCTTGCTCCCG+AGG 0.597874 tig0018025:+81758 Msa1363040:CDS
GCAGCTCTTGCTATACAGAT+GGG 0.603103 tig0018025:+82145 Msa1363040:CDS
CTACGCATGTACCAGTGCCA+GGG 0.604450 tig0018025:+82598 Msa1363040:CDS
GCAGAGATGCAAGGGTAATG+TGG 0.605714 tig0018025:+80407 Msa1363040:intron
AGTGTTGTGGAGTTAACTAG+TGG 0.606608 tig0018025:+81235 Msa1363040:CDS
ACTGGTACATGCGTAGAAGC+TGG 0.610837 tig0018025:-82591 None:intergenic
ATGAGGCACATGCCGTAAAG+CGG 0.612710 tig0018025:+82676 Msa1363040:CDS
TAGCAAGAGCTGCTTCACCA+TGG 0.619823 tig0018025:-82135 None:intergenic
ACATGCGTAGAAGCTGGTGG+TGG 0.621131 tig0018025:-82585 None:intergenic
AAACACATCCTTTGTCATAG+GGG 0.623129 tig0018025:-82799 None:intergenic
TGATACAGAATTGTTGTTAG+GGG 0.623310 tig0018025:-77942 None:intergenic
GTACATTAGGTGCTGAGTGG+TGG 0.623532 tig0018025:-82757 None:intergenic
GAAAACAGCTCTTGAAGTAG+GGG 0.627476 tig0018025:-79585 None:intergenic
TTCAATAGTTCCAACACCGA+GGG 0.628747 tig0018025:-82062 None:intergenic
TGTTGGCGACCTTAGTCCCG+AGG 0.631773 tig0018025:+80191 Msa1363040:CDS
ATAGTACAACAAAGGGAGGG+TGG 0.632298 tig0018025:-82884 None:intergenic
GGATTCTGCCTAAACTTCTG+TGG 0.638569 tig0018025:-78151 None:intergenic
ATTTGCATACAGATGAGGGA+AGG 0.645731 tig0018025:+83132 Msa1363040:three_prime_UTR
GTTAACTGGGCTTATACTCG+TGG 0.652233 tig0018025:+80041 Msa1363040:CDS
AGACCGGCAGGTGAAAACCC+TGG 0.653386 tig0018025:-82615 None:intergenic
TCTAGGGTTAGGGTTTGGAG+AGG 0.653838 tig0018025:-78115 None:intergenic
GTGGAGGATTAATAAGAGCA+GGG 0.654194 tig0018025:-78204 None:intergenic
AAAATAGTACAACAAAGGGA+GGG 0.662308 tig0018025:-82887 None:intergenic
GGAGTAGAGGCTGTTCCTGG+AGG 0.669202 tig0018025:-82558 None:intergenic
CTATTGTGACTCTCAATGGG+AGG 0.669427 tig0018025:+79916 Msa1363040:CDS
AAGATTGCCAACATAAACAG+TGG 0.678611 tig0018025:-81748 None:intergenic
AGAAGACAGGCCGATCTAGG+GGG 0.682305 tig0018025:+80434 Msa1363040:CDS
TTTGTGAGATACAGTACCCA+TGG 0.685076 tig0018025:+82118 Msa1363040:CDS
GTATTGTAAAACCATTCTAG+CGG 0.692949 tig0018025:-82845 None:intergenic
CTTCAATAGTTCCAACACCG+AGG 0.694923 tig0018025:-82063 None:intergenic
AGTAGGGGCTCTGAAACCTG+AGG 0.701470 tig0018025:-79570 None:intergenic
GCCCTAAAAGAGTGCCCTGG+GGG 0.703980 tig0018025:-82996 None:intergenic
GTAGTACATTAGGTGCTGAG+TGG 0.731282 tig0018025:-82760 None:intergenic
CAATTTAGACTCACACACTG+CGG 0.734937 tig0018025:-78943 None:intergenic
AGCCCTAAAAGAGTGCCCTG+GGG 0.752272 tig0018025:-82997 None:intergenic
GGTACATGCGTAGAAGCTGG+TGG 0.755423 tig0018025:-82588 None:intergenic
GTACTCGAATCAAAGCCAGG+AGG 0.789603 tig0018025:-78917 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTACATATCTATATTTTTTT+AGG - tig0018025:78328-78347 None:intergenic 10.0%
!! TAAAAAACCAAAAAATAAAA+AGG - tig0018025:78854-78873 None:intergenic 10.0%
!!! AAATAAATAAACATTTTGAT+TGG + tig0018025:80935-80954 Msa1363040:intron 10.0%
!! TATAAAAAATAAGTGAAAAG+TGG - tig0018025:78235-78254 None:intergenic 15.0%
!!! TAGTATATAATTTTGCTTTT+AGG + tig0018025:78821-78840 Msa1363040:intron 15.0%
!!! ATTTTCTCCTTTTTATTTTT+TGG + tig0018025:78844-78863 Msa1363040:intron 15.0%
!!! AGTTATTTTAGTTTTTAAGT+TGG + tig0018025:79049-79068 Msa1363040:intron 15.0%
!!! ATTTATTTTTAGTTTCAAGT+TGG - tig0018025:79317-79336 None:intergenic 15.0%
!! TGAAACTAAAAATAAATGTA+AGG + tig0018025:79320-79339 Msa1363040:intron 15.0%
!! GAAACTAAAAATAAATGTAA+GGG + tig0018025:79321-79340 Msa1363040:intron 15.0%
!!! GAAACAATTTACAATTTTAA+AGG - tig0018025:79417-79436 None:intergenic 15.0%
!!! TATATCTAATAATCACTTTT+GGG + tig0018025:79519-79538 Msa1363040:intron 15.0%
!! TTTATTAACCAAAAAATAGT+TGG + tig0018025:79753-79772 Msa1363040:intron 15.0%
!!! ATTTACTTTTACTATTCAAT+CGG + tig0018025:80146-80165 Msa1363040:intron 15.0%
!! TCGAAAAAAGAAAATATAAA+GGG - tig0018025:80280-80299 None:intergenic 15.0%
!! ATCGAAAAAAGAAAATATAA+AGG - tig0018025:80281-80300 None:intergenic 15.0%
!! TTGAAAAAATATAAATGATG+TGG - tig0018025:80720-80739 None:intergenic 15.0%
!! ATAAACAATTTACATCTTAA+AGG - tig0018025:80743-80762 None:intergenic 15.0%
!!! ATTATACAAAAATTCCTTTT+TGG + tig0018025:81282-81301 Msa1363040:intron 15.0%
!!! TTATACAAAAATTCCTTTTT+GGG + tig0018025:81283-81302 Msa1363040:intron 15.0%
!! GAAATCATTGTATAATTTAT+AGG - tig0018025:81402-81421 None:intergenic 15.0%
!! TTTAAAAATATTCCAATTGT+TGG + tig0018025:81449-81468 Msa1363040:intron 15.0%
!! ATTATGAAGCTTATTATATA+TGG - tig0018025:82452-82471 None:intergenic 15.0%
!! TGTATTACTACATTTAAATA+AGG + tig0018025:82957-82976 Msa1363040:three_prime_UTR 15.0%
!! GTATTACTACATTTAAATAA+GGG + tig0018025:82958-82977 Msa1363040:three_prime_UTR 15.0%
!!! TTAAACTTTCAATATTTTAC+AGG - tig0018025:83180-83199 None:intergenic 15.0%
!! AGTAGTAGTATAGTATTAAA+CGG + tig0018025:77895-77914 Msa1363040:five_prime_UTR 20.0%
!! AAAGAGAAAAGAAAATAAGA+AGG - tig0018025:78064-78083 None:intergenic 20.0%
!! TTGAAAATAATCACTTATGT+CGG - tig0018025:78509-78528 None:intergenic 20.0%
!!! GTATTTGAATTTTGTTTGAT+TGG + tig0018025:78784-78803 Msa1363040:intron 20.0%
!!! TTCTATTGTTCTTTCTTTTT+TGG + tig0018025:79001-79020 Msa1363040:intron 20.0%
!!! ATGTTTAAAAAGTTTGAAGT+TGG - tig0018025:79288-79307 None:intergenic 20.0%
!!! ACTTCAAACTTTTTAAACAT+AGG + tig0018025:79288-79307 Msa1363040:intron 20.0%
!!! CTTCAAACTTTTTAAACATA+GGG + tig0018025:79289-79308 Msa1363040:intron 20.0%
!!! TTCAAACTTTTTAAACATAG+GGG + tig0018025:79290-79309 Msa1363040:intron 20.0%
!! ACTAGATAAACAAAAAACTA+AGG - tig0018025:79348-79367 None:intergenic 20.0%
!! TAAAAACAAAGAAAAACTCA+CGG - tig0018025:79485-79504 None:intergenic 20.0%
!!! GTATATCTAATAATCACTTT+TGG + tig0018025:79518-79537 Msa1363040:intron 20.0%
!!! ATATCTAATAATCACTTTTG+GGG + tig0018025:79520-79539 Msa1363040:intron 20.0%
!!! GTATGTATTTTCTTAGTTAA+TGG + tig0018025:79944-79963 Msa1363040:intron 20.0%
!!! GTTTTTGTATGTAATTTAAC+AGG + tig0018025:80576-80595 Msa1363040:intron 20.0%
!!! ATTTTTTGTTTTCAACATAG+TGG + tig0018025:80664-80683 Msa1363040:intron 20.0%
!! TCCAACTAAAAAAATAAATC+TGG - tig0018025:80800-80819 None:intergenic 20.0%
!!! AAACATTTTGATTGGTTATA+TGG + tig0018025:80943-80962 Msa1363040:intron 20.0%
!!! AACATTTTGATTGGTTATAT+GGG + tig0018025:80944-80963 Msa1363040:intron 20.0%
!! CAGAAAAACAATAAAAAATC+CGG - tig0018025:81117-81136 None:intergenic 20.0%
!!! TAATTTTCAATCTATCATAG+TGG + tig0018025:81608-81627 Msa1363040:intron 20.0%
!! ATAGATATGAATGATTAGTA+AGG - tig0018025:81824-81843 None:intergenic 20.0%
!! ATAGAAAATAGTACAACAAA+GGG - tig0018025:82894-82913 None:intergenic 20.0%
!! AATAGAAAATAGTACAACAA+AGG - tig0018025:82895-82914 None:intergenic 20.0%
!! ATGATACAGAATTGTTGTTA+GGG - tig0018025:77946-77965 None:intergenic 25.0%
!!! ATCTATATTTTTTTAGGCGA+TGG - tig0018025:78322-78341 None:intergenic 25.0%
! CTGTAAATGCTTAATAACTT+AGG + tig0018025:78592-78611 Msa1363040:intron 25.0%
! ATGTTTAAAAAGTTCCAAGT+TGG + tig0018025:79078-79097 Msa1363040:intron 25.0%
! TCTTAGTTAATGGTAGTTAT+TGG + tig0018025:79954-79973 Msa1363040:intron 25.0%
! TTTACTATTCAATCGGATTT+AGG + tig0018025:80153-80172 Msa1363040:intron 25.0%
! TTCATTAATATCATGACACT+TGG + tig0018025:80378-80397 Msa1363040:intron 25.0%
! ACTAAAAAAATAAATCTGGC+TGG - tig0018025:80796-80815 None:intergenic 25.0%
!!! GCCAGATTTATTTTTTTAGT+TGG + tig0018025:80796-80815 Msa1363040:intron 25.0%
! TAGTTGGAATCACATTATAT+CGG + tig0018025:80812-80831 Msa1363040:intron 25.0%
! TCGGAAAATTAATATACATG+TGG + tig0018025:80831-80850 Msa1363040:intron 25.0%
! TAAATTAGCGATAATGCTAT+TGG + tig0018025:81017-81036 Msa1363040:intron 25.0%
!!! TATTGTTTTTCTGATACTTC+AGG + tig0018025:81124-81143 Msa1363040:intron 25.0%
! AAAAATGAAAACACCCAAAA+AGG - tig0018025:81299-81318 None:intergenic 25.0%
! ACAATGATTTCTGATGAAAA+CGG + tig0018025:81411-81430 Msa1363040:intron 25.0%
!!! GGCTTCAAATGATTTTTTAA+CGG + tig0018025:81470-81489 Msa1363040:intron 25.0%
!!! GCTTCAAATGATTTTTTAAC+GGG + tig0018025:81471-81490 Msa1363040:intron 25.0%
!!! CTTCAAATGATTTTTTAACG+GGG + tig0018025:81472-81491 Msa1363040:intron 25.0%
!!! ACAGCTTTAAAGCTAATATT+AGG - tig0018025:81502-81521 None:intergenic 25.0%
! ACTAATCATTCATATCTATC+TGG + tig0018025:81825-81844 Msa1363040:intron 25.0%
! CTAATCATTCATATCTATCT+GGG + tig0018025:81826-81845 Msa1363040:intron 25.0%
! ACTTTCTCTGTCTATTTAAA+TGG + tig0018025:81852-81871 Msa1363040:intron 25.0%
! CTTTCTCTGTCTATTTAAAT+GGG + tig0018025:81853-81872 Msa1363040:intron 25.0%
! AGACTATAGTTACTATAGTA+TGG + tig0018025:81879-81898 Msa1363040:intron 25.0%
! TTAGAACAAACTGAATTTAC+AGG - tig0018025:81972-81991 None:intergenic 25.0%
!!! AAAATTGCCTTTTGTTATCA+TGG + tig0018025:81990-82009 Msa1363040:intron 25.0%
!! TCTGTAATTTTCAAAGACAA+AGG + tig0018025:82351-82370 Msa1363040:intron 25.0%
! ATAAGCTTCATAATACTCAA+AGG + tig0018025:82458-82477 Msa1363040:intron 25.0%
!! TATTTTACTGGTAGTACATT+AGG - tig0018025:82773-82792 None:intergenic 25.0%
! AAGCATAAAGAAACTACAAA+AGG - tig0018025:82929-82948 None:intergenic 25.0%
! TGATACAGAATTGTTGTTAG+GGG - tig0018025:77945-77964 None:intergenic 30.0%
! GATGATACAGAATTGTTGTT+AGG - tig0018025:77947-77966 None:intergenic 30.0%
AAAAGACAGACAATAGAAAG+AGG - tig0018025:77975-77994 None:intergenic 30.0%
TTTGGAGAGGTAATAGAAAT+GGG - tig0018025:78105-78124 None:intergenic 30.0%
! TTTTGATGTATTGTCTACGT+TGG + tig0018025:78360-78379 Msa1363040:intron 30.0%
TTTGATGTATTGTCTACGTT+GGG + tig0018025:78361-78380 Msa1363040:intron 30.0%
CACACATGTAAAAAGCAAAA+AGG + tig0018025:78677-78696 Msa1363040:intron 30.0%
!! TTTGATTGGATTAGTAGAGA+GGG + tig0018025:78798-78817 Msa1363040:intron 30.0%
!! TTTTGGCTAAATTGCATGTT+TGG + tig0018025:79018-79037 Msa1363040:intron 30.0%
CAAGCTTATTCGAAAAGAAA+AGG + tig0018025:79632-79651 Msa1363040:CDS 30.0%
!!! TTGTCTAGCCAACTATTTTT+TGG - tig0018025:79764-79783 None:intergenic 30.0%
AAAATAGTTGGCTAGACAAT+TGG + tig0018025:79765-79784 Msa1363040:intron 30.0%
CAATATATAGCAGATCATCA+TGG - tig0018025:79837-79856 None:intergenic 30.0%
GTTAATGGTAGTTATTGGAA+CGG + tig0018025:79959-79978 Msa1363040:intron 30.0%
! TTCTGCTGATTATGTATGTT+TGG + tig0018025:80091-80110 Msa1363040:intron 30.0%
ATTTGTGTTCAGAAAAAGAC+AGG - tig0018025:80128-80147 None:intergenic 30.0%
!!! CTTTTTTCGATTTGTTATCC+CGG + tig0018025:80290-80309 Msa1363040:intron 30.0%
TGTTATCTTTCTTCTCTCTT+TGG + tig0018025:80512-80531 Msa1363040:intron 30.0%
TAAATCGTTTATGGCACTTT+GGG - tig0018025:80605-80624 None:intergenic 30.0%
TTAAATCGTTTATGGCACTT+TGG - tig0018025:80606-80625 None:intergenic 30.0%
CTTACCAGTTAAATCGTTTA+TGG - tig0018025:80614-80633 None:intergenic 30.0%
! TAATTGTGCTGTTGTTTATG+CGG + tig0018025:80905-80924 Msa1363040:intron 30.0%
! TGATTGGTTATATGGGATTA+TGG + tig0018025:80951-80970 Msa1363040:intron 30.0%
GACTTGAATATCAAATGCTT+CGG - tig0018025:80978-80997 None:intergenic 30.0%
TAGCATTATCGCTAATTTAC+TGG - tig0018025:81016-81035 None:intergenic 30.0%
TTTCTGATACTTCAGGTAAA+TGG + tig0018025:81131-81150 Msa1363040:intron 30.0%
! ATTGATATTAGCTCCTTTTG+TGG - tig0018025:81188-81207 None:intergenic 30.0%
ACAAAAGGAGCTAATATCAA+TGG + tig0018025:81187-81206 Msa1363040:CDS 30.0%
! AATCATTTGAAGCCAACAAT+TGG - tig0018025:81464-81483 None:intergenic 30.0%
!!! CGGTTTTTTCATTTATGTCA+CGG + tig0018025:81542-81561 Msa1363040:intron 30.0%
AATAATGCTTACTTCTTGGT+TGG + tig0018025:81655-81674 Msa1363040:intron 30.0%
ACATAAACAGTGGTATATTG+AGG - tig0018025:81741-81760 None:intergenic 30.0%
CAATATACCACTGTTTATGT+TGG + tig0018025:81741-81760 Msa1363040:CDS 30.0%
TTGGAACTATTGAAGATGTT+AGG + tig0018025:82071-82090 Msa1363040:CDS 30.0%
TGGAACTATTGAAGATGTTA+GGG + tig0018025:82072-82091 Msa1363040:CDS 30.0%
! TGATATCTGTCTATCCTTTT+TGG + tig0018025:82272-82291 Msa1363040:intron 30.0%
CTCTAGATAAAAAGCCAAAA+AGG - tig0018025:82289-82308 None:intergenic 30.0%
!!! CTTTTTGGCTTTTTATCTAG+AGG + tig0018025:82287-82306 Msa1363040:intron 30.0%
!!! CCTTGATACAACATTTTTTC+TGG - tig0018025:82320-82339 None:intergenic 30.0%
CCAGAAAAAATGTTGTATCA+AGG + tig0018025:82317-82336 Msa1363040:intron 30.0%
AAGCTTATTATATATGGTCG+AGG - tig0018025:82446-82465 None:intergenic 30.0%
! TTGATATTTTGCAGTGTTCA+TGG + tig0018025:82520-82539 Msa1363040:intron 30.0%
! TGATATTTTGCAGTGTTCAT+GGG + tig0018025:82521-82540 Msa1363040:intron 30.0%
TAAACACATCCTTTGTCATA+GGG - tig0018025:82803-82822 None:intergenic 30.0%
ATAAACACATCCTTTGTCAT+AGG - tig0018025:82804-82823 None:intergenic 30.0%
GTATTGTAAAACCATTCTAG+CGG - tig0018025:82848-82867 None:intergenic 30.0%
AAAATAGTACAACAAAGGGA+GGG - tig0018025:82890-82909 None:intergenic 30.0%
TCATTATATATTACTGAGCC+AGG + tig0018025:83043-83062 Msa1363040:three_prime_UTR 30.0%
TGTAAGCTCTTTGTGAATAA+GGG + tig0018025:83097-83116 Msa1363040:three_prime_UTR 30.0%
TTGAAATTTGCATACAGATG+AGG + tig0018025:83127-83146 Msa1363040:three_prime_UTR 30.0%
TGAAATTTGCATACAGATGA+GGG + tig0018025:83128-83147 Msa1363040:three_prime_UTR 30.0%
! GATACAGAATTGTTGTTAGG+GGG - tig0018025:77944-77963 None:intergenic 35.0%
AAAAAAAACCCTCGAAGAGA+GGG - tig0018025:78006-78025 None:intergenic 35.0%
AAAAAAAAACCCTCGAAGAG+AGG - tig0018025:78007-78026 None:intergenic 35.0%
GTTTGGAGAGGTAATAGAAA+TGG - tig0018025:78106-78125 None:intergenic 35.0%
TTGATGTATTGTCTACGTTG+GGG + tig0018025:78362-78381 Msa1363040:intron 35.0%
AATAATCACTTATGTCGGTG+TGG - tig0018025:78504-78523 None:intergenic 35.0%
TGTTATGAGCAATTCTTGTG+TGG + tig0018025:78624-78643 Msa1363040:intron 35.0%
AAAGAATTATTCAGCGTTGC+TGG + tig0018025:78761-78780 Msa1363040:intron 35.0%
AAGAATTATTCAGCGTTGCT+GGG + tig0018025:78762-78781 Msa1363040:intron 35.0%
!! GTTTGATTGGATTAGTAGAG+AGG + tig0018025:78797-78816 Msa1363040:intron 35.0%
! TGTAGACATCAGTATCGAAA+TGG - tig0018025:79105-79124 None:intergenic 35.0%
ACGAACACATGGATAACTTT+GGG - tig0018025:79188-79207 None:intergenic 35.0%
TTAAAGGCAATGAAGTCAAC+AGG - tig0018025:79401-79420 None:intergenic 35.0%
TGAAAACAGCTCTTGAAGTA+GGG - tig0018025:79589-79608 None:intergenic 35.0%
TTGAAAACAGCTCTTGAAGT+AGG - tig0018025:79590-79609 None:intergenic 35.0%
GCTAGACAATTGGCTATATA+TGG + tig0018025:79775-79794 Msa1363040:intron 35.0%
ATCATCATGGTTGAAAAGAC+AGG - tig0018025:79824-79843 None:intergenic 35.0%
! ATTGCTATTGTGACTCTCAA+TGG + tig0018025:79912-79931 Msa1363040:CDS 35.0%
! TTGCTATTGTGACTCTCAAT+GGG + tig0018025:79913-79932 Msa1363040:CDS 35.0%
! AACACATTGTCTGCAGTTTT+GGG + tig0018025:80006-80025 Msa1363040:intron 35.0%
GCAGTCTATCAAAGTTAACT+GGG + tig0018025:80028-80047 Msa1363040:CDS 35.0%
!! GGACACTTCCATATTTTTGT+TGG + tig0018025:80174-80193 Msa1363040:intron 35.0%
TAAGGTCGCCAACAAAAATA+TGG - tig0018025:80185-80204 None:intergenic 35.0%
! TTTGTTATCCCGGTTTATTC+AGG + tig0018025:80300-80319 Msa1363040:intron 35.0%
TTGTTATCCCGGTTTATTCA+GGG + tig0018025:80301-80320 Msa1363040:intron 35.0%
! TGTTTCTTTTCGAAATCAGC+AGG + tig0018025:80465-80484 Msa1363040:CDS 35.0%
AGTGCCATAAACGATTTAAC+TGG + tig0018025:80607-80626 Msa1363040:CDS 35.0%
AGGTGGTTTAACCATGAAAT+AGG - tig0018025:80859-80878 None:intergenic 35.0%
GCATAAACAACAGCACAATT+AGG - tig0018025:80906-80925 None:intergenic 35.0%
! CTAATTTACTGGTGTTAGTG+AGG - tig0018025:81005-81024 None:intergenic 35.0%
CGATAATGCTATTGGATGTT+TGG + tig0018025:81025-81044 Msa1363040:intron 35.0%
TAGACAGATCCGTTGTAATT+GGG + tig0018025:81162-81181 Msa1363040:CDS 35.0%
! AGTTAACTCCACAACACTTT+TGG - tig0018025:81233-81252 None:intergenic 35.0%
!!! GTTTTTTTATCGTGTGCAGT+TGG + tig0018025:81325-81344 Msa1363040:intron 35.0%
ACCAAGCAAAATCAACAATC+AGG - tig0018025:81634-81653 None:intergenic 35.0%
GGTGAATAATGCTTACTTCT+TGG + tig0018025:81651-81670 Msa1363040:intron 35.0%
GTATATTGAGGATTCTTCTC+AGG - tig0018025:81729-81748 None:intergenic 35.0%
AAGATTGCCAACATAAACAG+TGG - tig0018025:81751-81770 None:intergenic 35.0%
! AAAAGTATGAATCCTTGCCT+CGG - tig0018025:81778-81797 None:intergenic 35.0%
AGTTACTATAGTATGGACTC+TGG + tig0018025:81886-81905 Msa1363040:intron 35.0%
TCACAGACCATGATAACAAA+AGG - tig0018025:82000-82019 None:intergenic 35.0%
! TGCAACGAGACAAAAGTTTT+GGG + tig0018025:82095-82114 Msa1363040:CDS 35.0%
ATTATAAATACCCTGCCAGT+TGG - tig0018025:82213-82232 None:intergenic 35.0%
! GATATTTTGCAGTGTTCATG+GGG + tig0018025:82522-82541 Msa1363040:intron 35.0%
! TAGGGGATTGGATATTTTAC+TGG - tig0018025:82785-82804 None:intergenic 35.0%
AAACACATCCTTTGTCATAG+GGG - tig0018025:82802-82821 None:intergenic 35.0%
GAAAATAGTACAACAAAGGG+AGG - tig0018025:82891-82910 None:intergenic 35.0%
ATATTACTGAGCCAGGATTT+AGG + tig0018025:83050-83069 Msa1363040:three_prime_UTR 35.0%
TTTAGGCATTTGGTTAGGTA+AGG + tig0018025:83067-83086 Msa1363040:three_prime_UTR 35.0%
TTAGGCATTTGGTTAGGTAA+GGG + tig0018025:83068-83087 Msa1363040:three_prime_UTR 35.0%
ATTTGGTTAGGTAAGGGATA+TGG + tig0018025:83074-83093 Msa1363040:three_prime_UTR 35.0%
GTGTAAGCTCTTTGTGAATA+AGG + tig0018025:83096-83115 Msa1363040:three_prime_UTR 35.0%
!! CATCTTCAGTTCTAGGGTTA+GGG - tig0018025:78128-78147 None:intergenic 40.0%
!! ACATCTTCAGTTCTAGGGTT+AGG - tig0018025:78129-78148 None:intergenic 40.0%
TGGCAACATCTTCAGTTCTA+GGG - tig0018025:78134-78153 None:intergenic 40.0%
AGATGTTGCCACAGAAGTTT+AGG + tig0018025:78143-78162 Msa1363040:exon 40.0%
GATTAATAAGAGCAGGGTGT+TGG - tig0018025:78201-78220 None:intergenic 40.0%
GTGGAGGATTAATAAGAGCA+GGG - tig0018025:78207-78226 None:intergenic 40.0%
TGTGGAGGATTAATAAGAGC+AGG - tig0018025:78208-78227 None:intergenic 40.0%
TGCTCTTATTAATCCTCCAC+AGG + tig0018025:78207-78226 Msa1363040:CDS 40.0%
TAAGTGAAAAGTGGAACCTG+TGG - tig0018025:78226-78245 None:intergenic 40.0%
TACTAGTGTAGTGTCGTATC+AGG + tig0018025:78551-78570 Msa1363040:intron 40.0%
CAATTTAGACTCACACACTG+CGG - tig0018025:78946-78965 None:intergenic 40.0%
! AGTATCGAAATGGACCAACT+TGG - tig0018025:79095-79114 None:intergenic 40.0%
GAACACATGGATAACTTTGG+GGG - tig0018025:79186-79205 None:intergenic 40.0%
CGAACACATGGATAACTTTG+GGG - tig0018025:79187-79206 None:intergenic 40.0%
GACGAACACATGGATAACTT+TGG - tig0018025:79189-79208 None:intergenic 40.0%
!! AGCCACATGCATGTTTTGAA+CGG + tig0018025:79215-79234 Msa1363040:intron 40.0%
TTCCGTTCAAAACATGCATG+TGG - tig0018025:79220-79239 None:intergenic 40.0%
TCACTTAAGGCTGCTAAACT+AGG - tig0018025:79378-79397 None:intergenic 40.0%
TGAAGTCAACAGGTCACTTA+AGG - tig0018025:79391-79410 None:intergenic 40.0%
TTGGGGAAATGCAGTTATGT+CGG + tig0018025:79537-79556 Msa1363040:intron 40.0%
GAAAACAGCTCTTGAAGTAG+GGG - tig0018025:79588-79607 None:intergenic 40.0%
AATAAGCTTGCACCCTTCAA+GGG - tig0018025:79622-79641 None:intergenic 40.0%
TGTCATCTGCAGTCATCATA+TGG + tig0018025:79855-79874 Msa1363040:intron 40.0%
CAAAACTGCAGACAATGTGT+TGG - tig0018025:80007-80026 None:intergenic 40.0%
! CAACACATTGTCTGCAGTTT+TGG + tig0018025:80005-80024 Msa1363040:intron 40.0%
GGCAGTCTATCAAAGTTAAC+TGG + tig0018025:80027-80046 Msa1363040:CDS 40.0%
TGTTATCCCGGTTTATTCAG+GGG + tig0018025:80302-80321 Msa1363040:intron 40.0%
AAACATCCCCCTGAATAAAC+CGG - tig0018025:80312-80331 None:intergenic 40.0%
TAGTGGAAGTGAAGTGTGTA+TGG + tig0018025:80681-80700 Msa1363040:intron 40.0%
TACATGTGGTGCCTATTTCA+TGG + tig0018025:80845-80864 Msa1363040:intron 40.0%
TCATGGTTAAACCACCTTCT+AGG + tig0018025:80862-80881 Msa1363040:intron 40.0%
CATGGTTAAACCACCTTCTA+GGG + tig0018025:80863-80882 Msa1363040:intron 40.0%
ATGGTTAAACCACCTTCTAG+GGG + tig0018025:80864-80883 Msa1363040:intron 40.0%
TTTAGTGCTTCAGTTGAGTC+CGG + tig0018025:81095-81114 Msa1363040:intron 40.0%
GATACTTCAGGTAAATGGCT+TGG + tig0018025:81136-81155 Msa1363040:intron 40.0%
GTAGACAGATCCGTTGTAAT+TGG + tig0018025:81161-81180 Msa1363040:CDS 40.0%
! CTTTTGTGGCCCAATTACAA+CGG - tig0018025:81174-81193 None:intergenic 40.0%
!! TTCAGAGTCCAAAAGTGTTG+TGG + tig0018025:81222-81241 Msa1363040:CDS 40.0%
AGTGTTGTGGAGTTAACTAG+TGG + tig0018025:81235-81254 Msa1363040:CDS 40.0%
GAGTTAACTAGTGGAACATC+TGG + tig0018025:81244-81263 Msa1363040:CDS 40.0%
TGAATGTTGTTGTAGTCGTG+CGG + tig0018025:81522-81541 Msa1363040:intron 40.0%
!!! GCCTGATTGTTGATTTTGCT+TGG + tig0018025:81630-81649 Msa1363040:intron 40.0%
!! ATTTTCTGTAGAAGAAGCGC+AGG + tig0018025:81683-81702 Msa1363040:intron 40.0%
AAAGTATGAATCCTTGCCTC+GGG - tig0018025:81777-81796 None:intergenic 40.0%
! CATCATCATTTTCATGCCCT+CGG + tig0018025:82046-82065 Msa1363040:CDS 40.0%
TTCAATAGTTCCAACACCGA+GGG - tig0018025:82065-82084 None:intergenic 40.0%
! GTGCAACGAGACAAAAGTTT+TGG + tig0018025:82094-82113 Msa1363040:CDS 40.0%
TTTGTGAGATACAGTACCCA+TGG + tig0018025:82118-82137 Msa1363040:CDS 40.0%
TCTGTTTGGCAAACCTATCA+AGG + tig0018025:82180-82199 Msa1363040:CDS 40.0%
GGCAAACCTATCAAGGTAAA+TGG + tig0018025:82187-82206 Msa1363040:intron 40.0%
AGTTGGCCATTTACCTTGAT+AGG - tig0018025:82196-82215 None:intergenic 40.0%
TATCAAGGTAAATGGCCAAC+TGG + tig0018025:82195-82214 Msa1363040:intron 40.0%
! TCATTTTGCTCAAAGCCAAC+TGG - tig0018025:82656-82675 None:intergenic 40.0%
!! GGCTTTGAGCAAAATGAATG+AGG + tig0018025:82659-82678 Msa1363040:CDS 40.0%
TATCCAATCCCCTATGACAA+AGG + tig0018025:82791-82810 Msa1363040:three_prime_UTR 40.0%
AGTTTATTGAGCCGCTAGAA+TGG + tig0018025:82834-82853 Msa1363040:three_prime_UTR 40.0%
!!! CACTCTTTTAGGGCTATAAG+TGG + tig0018025:83005-83024 Msa1363040:three_prime_UTR 40.0%
CTAACCAAATGCCTAAATCC+TGG - tig0018025:83064-83083 None:intergenic 40.0%
CAGGATTTAGGCATTTGGTT+AGG + tig0018025:83062-83081 Msa1363040:three_prime_UTR 40.0%
ATTTGCATACAGATGAGGGA+AGG + tig0018025:83132-83151 Msa1363040:three_prime_UTR 40.0%
!! TCAGTTCTAGGGTTAGGGTT+TGG - tig0018025:78123-78142 None:intergenic 45.0%
GTGGCAACATCTTCAGTTCT+AGG - tig0018025:78135-78154 None:intergenic 45.0%
GGATTCTGCCTAAACTTCTG+TGG - tig0018025:78154-78173 None:intergenic 45.0%
!! AGAGAGTGTTGCTGAATCAG+AGG - tig0018025:78175-78194 None:intergenic 45.0%
CTTCTATCAGAGCTAGCTGT+CGG - tig0018025:78462-78481 None:intergenic 45.0%
GCAATTCTTGTGTGGACATG+AGG + tig0018025:78632-78651 Msa1363040:intron 45.0%
CAGATAGAGCCTATCTTGAG+TGG + tig0018025:78887-78906 Msa1363040:intron 45.0%
GGCAGATTTCCACTCAAGAT+AGG - tig0018025:78899-78918 None:intergenic 45.0%
CAAGTACTCGAATCAAAGCC+AGG - tig0018025:78923-78942 None:intergenic 45.0%
ATGTGTCCAAAACGTCCACA+TGG + tig0018025:79158-79177 Msa1363040:intron 45.0%
AGAAAAACTCACGGAGACTG+CGG - tig0018025:79476-79495 None:intergenic 45.0%
!!! CAAGAGCTGTTTTCAAGTGC+TGG + tig0018025:79594-79613 Msa1363040:CDS 45.0%
GAATAAGCTTGCACCCTTCA+AGG - tig0018025:79623-79642 None:intergenic 45.0%
CTATTGTGACTCTCAATGGG+AGG + tig0018025:79916-79935 Msa1363040:CDS 45.0%
GTTAACTGGGCTTATACTCG+TGG + tig0018025:80041-80060 Msa1363040:CDS 45.0%
AGAGTTGCATCTGTAACCTC+GGG - tig0018025:80210-80229 None:intergenic 45.0%
CAGAGTTGCATCTGTAACCT+CGG - tig0018025:80211-80230 None:intergenic 45.0%
GTTATCCCGGTTTATTCAGG+GGG + tig0018025:80303-80322 Msa1363040:intron 45.0%
AACATCCCCCTGAATAAACC+GGG - tig0018025:80311-80330 None:intergenic 45.0%
!! TGGTTTGTTGCAGAGATGCA+AGG + tig0018025:80398-80417 Msa1363040:intron 45.0%
!! GGTTTGTTGCAGAGATGCAA+GGG + tig0018025:80399-80418 Msa1363040:intron 45.0%
CAGAGATGCAAGGGTAATGT+GGG + tig0018025:80408-80427 Msa1363040:intron 45.0%
CAAATCCAAACCCCCTAGAT+CGG - tig0018025:80447-80466 None:intergenic 45.0%
TTGTGTGCTTGCCATGCTAA+TGG + tig0018025:80541-80560 Msa1363040:intron 45.0%
TGCTTGCCATGCTAATGGTT+GGG + tig0018025:80546-80565 Msa1363040:intron 45.0%
AAGTCACCCAACCATTAGCA+TGG - tig0018025:80555-80574 None:intergenic 45.0%
TGGTTAAACCACCTTCTAGG+GGG + tig0018025:80865-80884 Msa1363040:intron 45.0%
! TTACTGGTGTTAGTGAGGTG+AGG - tig0018025:81000-81019 None:intergenic 45.0%
CGTTGTAATTGGGCCACAAA+AGG + tig0018025:81172-81191 Msa1363040:CDS 45.0%
TGGAACATCTGGTGAGATCA+CGG + tig0018025:81255-81274 Msa1363040:intron 45.0%
ATCATGGTCTGTGAAATCGC+AGG + tig0018025:82006-82025 Msa1363040:intron 45.0%
! CGAGGGCATGAAAATGATGA+TGG - tig0018025:82048-82067 None:intergenic 45.0%
CTTCAATAGTTCCAACACCG+AGG - tig0018025:82066-82085 None:intergenic 45.0%
! AGCAGCTCTTGCTATACAGA+TGG + tig0018025:82144-82163 Msa1363040:CDS 45.0%
! GCAGCTCTTGCTATACAGAT+GGG + tig0018025:82145-82164 Msa1363040:CDS 45.0%
CTATACAGATGGGCAATGCT+CGG + tig0018025:82155-82174 Msa1363040:CDS 45.0%
GCGTTCATACAATGCAAGAC+CGG - tig0018025:82634-82653 None:intergenic 45.0%
TGCATTGTATGAACGCCAGT+TGG + tig0018025:82638-82657 Msa1363040:CDS 45.0%
!! GTAGTACATTAGGTGCTGAG+TGG - tig0018025:82763-82782 None:intergenic 45.0%
CATCCTTTGTCATAGGGGAT+TGG - tig0018025:82797-82816 None:intergenic 45.0%
ATAGTACAACAAAGGGAGGG+TGG - tig0018025:82887-82906 None:intergenic 45.0%
!! AAATGTTAAAGAGTGCCCCC+AGG + tig0018025:82981-83000 Msa1363040:three_prime_UTR 45.0%
!! AATGTTAAAGAGTGCCCCCA+GGG + tig0018025:82982-83001 Msa1363040:three_prime_UTR 45.0%
TGAGCCAGGATTTAGGCATT+TGG + tig0018025:83057-83076 Msa1363040:three_prime_UTR 45.0%
! TCTAGGGTTAGGGTTTGGAG+AGG - tig0018025:78118-78137 None:intergenic 50.0%
GTGAAAAGTGGAACCTGTGG+AGG - tig0018025:78223-78242 None:intergenic 50.0%
!! TCGGTGCTACAGAGTAGCTA+AGG - tig0018025:78443-78462 None:intergenic 50.0%
!! CGACAGCTAGCTCTGATAGA+AGG + tig0018025:78460-78479 Msa1363040:intron 50.0%
! GCTCTGATAGAAGGCGTATC+AGG + tig0018025:78469-78488 Msa1363040:intron 50.0%
CACTTATGTCGGTGTGGTGT+CGG - tig0018025:78498-78517 None:intergenic 50.0%
GTGTAGTGTCGTATCAGGTC+AGG + tig0018025:78556-78575 Msa1363040:intron 50.0%
TTGAGTGGAAATCTGCCTCC+TGG + tig0018025:78902-78921 Msa1363040:CDS 50.0%
GTACTCGAATCAAAGCCAGG+AGG - tig0018025:78920-78939 None:intergenic 50.0%
!! ATAACTTTGGGGGTGCCATG+TGG - tig0018025:79176-79195 None:intergenic 50.0%
GGCTAACAGAGACGAACACA+TGG - tig0018025:79199-79218 None:intergenic 50.0%
TGTCGGCAACATTCATCCTC+AGG + tig0018025:79554-79573 Msa1363040:CDS 50.0%
GCAGTCATCATATGGCTTCG+TGG + tig0018025:79863-79882 Msa1363040:intron 50.0%
GGTCAGAGAGAAGACACATC+AGG + tig0018025:80062-80081 Msa1363040:CDS 50.0%
CATCTGTAACCTCGGGACTA+AGG - tig0018025:80203-80222 None:intergenic 50.0%
GCAGAGATGCAAGGGTAATG+TGG + tig0018025:80407-80426 Msa1363040:intron 50.0%
GTAATGTGGGACCAGAAGAC+AGG + tig0018025:80421-80440 Msa1363040:CDS 50.0%
GTGCTTGCCATGCTAATGGT+TGG + tig0018025:80545-80564 Msa1363040:intron 50.0%
CTGGAGCTTGCAGCAAGATA+TGG - tig0018025:80777-80796 None:intergenic 50.0%
CATCATCAGATCCCCCTAGA+AGG - tig0018025:80879-80898 None:intergenic 50.0%
GGAACATCTGGTGAGATCAC+GGG + tig0018025:81256-81275 Msa1363040:intron 50.0%
CTTCTCAGGACTGTCATCAC+TGG - tig0018025:81715-81734 None:intergenic 50.0%
!! CATTTTCATGCCCTCGGTGT+TGG + tig0018025:82052-82071 Msa1363040:CDS 50.0%
AGCAAGAGCTGCTTCACCAT+GGG - tig0018025:82137-82156 None:intergenic 50.0%
TAGCAAGAGCTGCTTCACCA+TGG - tig0018025:82138-82157 None:intergenic 50.0%
GGCAATGCTCGGTTTCTGTT+TGG + tig0018025:82166-82185 Msa1363040:CDS 50.0%
AAGGTAAATGGCCAACTGGC+AGG + tig0018025:82199-82218 Msa1363040:intron 50.0%
AGGTAAATGGCCAACTGGCA+GGG + tig0018025:82200-82219 Msa1363040:intron 50.0%
ACTGGTACATGCGTAGAAGC+TGG - tig0018025:82594-82613 None:intergenic 50.0%
TCATACAATGCAAGACCGGC+AGG - tig0018025:82630-82649 None:intergenic 50.0%
ATGAGGCACATGCCGTAAAG+CGG + tig0018025:82676-82695 Msa1363040:CDS 50.0%
GCTGAGTGGTGGCAACATTA+GGG - tig0018025:82749-82768 None:intergenic 50.0%
TGCTGAGTGGTGGCAACATT+AGG - tig0018025:82750-82769 None:intergenic 50.0%
!! GTACATTAGGTGCTGAGTGG+TGG - tig0018025:82760-82779 None:intergenic 50.0%
!! TAGCCCTAAAAGAGTGCCCT+GGG - tig0018025:83001-83020 None:intergenic 50.0%
!! ATAGCCCTAAAAGAGTGCCC+TGG - tig0018025:83002-83021 None:intergenic 50.0%
TCTTCCTCACCCTCTCTTCG+AGG + tig0018025:77994-78013 Msa1363040:five_prime_UTR 55.0%
CTTCCTCACCCTCTCTTCGA+GGG + tig0018025:77995-78014 Msa1363040:five_prime_UTR 55.0%
AAACCCTCGAAGAGAGGGTG+AGG - tig0018025:78001-78020 None:intergenic 55.0%
!! AGTAGGGGCTCTGAAACCTG+AGG - tig0018025:79573-79592 None:intergenic 55.0%
!! TCAAGTGCTGGTGCCCTTGA+AGG + tig0018025:79606-79625 Msa1363040:CDS 55.0%
!! CAAGTGCTGGTGCCCTTGAA+GGG + tig0018025:79607-79626 Msa1363040:CDS 55.0%
ACCAGAAGACAGGCCGATCT+AGG + tig0018025:80431-80450 Msa1363040:CDS 55.0%
CCAGAAGACAGGCCGATCTA+GGG + tig0018025:80432-80451 Msa1363040:CDS 55.0%
CAGAAGACAGGCCGATCTAG+GGG + tig0018025:80433-80452 Msa1363040:CDS 55.0%
AGAAGACAGGCCGATCTAGG+GGG + tig0018025:80434-80453 Msa1363040:CDS 55.0%
CATCAGATCCCCCTAGAAGG+TGG - tig0018025:80876-80895 None:intergenic 55.0%
TGTTGGCAATCTTGCTCCCG+AGG + tig0018025:81758-81777 Msa1363040:CDS 55.0%
AGAGGAGTAGAGGCTGTTCC+TGG - tig0018025:82564-82583 None:intergenic 55.0%
!! TGGTGGTGGAAGAGGAGTAG+AGG - tig0018025:82574-82593 None:intergenic 55.0%
!! GTAGAAGCTGGTGGTGGAAG+AGG - tig0018025:82582-82601 None:intergenic 55.0%
ACATGCGTAGAAGCTGGTGG+TGG - tig0018025:82588-82607 None:intergenic 55.0%
GGTACATGCGTAGAAGCTGG+TGG - tig0018025:82591-82610 None:intergenic 55.0%
TCTACGCATGTACCAGTGCC+AGG + tig0018025:82597-82616 Msa1363040:CDS 55.0%
CTACGCATGTACCAGTGCCA+GGG + tig0018025:82598-82617 Msa1363040:CDS 55.0%
TGAGGCACATGCCGTAAAGC+GGG + tig0018025:82677-82696 Msa1363040:CDS 55.0%
CCATGGGAATGGGTGCTCTT+GGG + tig0018025:82703-82722 Msa1363040:CDS 55.0%
CATGGGAATGGGTGCTCTTG+GGG + tig0018025:82704-82723 Msa1363040:CDS 55.0%
!! AGCCCTAAAAGAGTGCCCTG+GGG - tig0018025:83000-83019 None:intergenic 55.0%
!! GGGGTGCCATGTGGACGTTT+TGG - tig0018025:79167-79186 None:intergenic 60.0%
TGTTGGCGACCTTAGTCCCG+AGG + tig0018025:80191-80210 Msa1363040:CDS 60.0%
CCCTAGATCGGCCTGTCTTC+TGG - tig0018025:80435-80454 None:intergenic 60.0%
ACAGGCCGATCTAGGGGGTT+TGG + tig0018025:80439-80458 Msa1363040:CDS 60.0%
GCAATCTTGCTCCCGAGGCA+AGG + tig0018025:81763-81782 Msa1363040:intron 60.0%
GGTAGCAAGCCTACTCCTCC+AGG + tig0018025:82543-82562 Msa1363040:CDS 60.0%
GAGGCTGTTCCTGGAGGAGT+AGG - tig0018025:82555-82574 None:intergenic 60.0%
GGAGTAGAGGCTGTTCCTGG+AGG - tig0018025:82561-82580 None:intergenic 60.0%
GCAGGTGAAAACCCTGGCAC+TGG - tig0018025:82612-82631 None:intergenic 60.0%
! GTGCCAGGGTTTTCACCTGC+CGG + tig0018025:82612-82631 Msa1363040:CDS 60.0%
AGACCGGCAGGTGAAAACCC+TGG - tig0018025:82618-82637 None:intergenic 60.0%
TCCCATGGCTGCCCGCTTTA+CGG - tig0018025:82691-82710 None:intergenic 60.0%
AAAGCGGGCAGCCATGGGAA+TGG + tig0018025:82692-82711 Msa1363040:CDS 60.0%
AAGCGGGCAGCCATGGGAAT+GGG + tig0018025:82693-82712 Msa1363040:CDS 60.0%
GCCATGGGAATGGGTGCTCT+TGG + tig0018025:82702-82721 Msa1363040:CDS 60.0%
!! CCCAAGAGCACCCATTCCCA+TGG - tig0018025:82706-82725 None:intergenic 60.0%
GAATGGGTGCTCTTGGGGCT+GGG + tig0018025:82709-82728 Msa1363040:CDS 60.0%
!! TGCCCCCAGGGCACTCTTTT+AGG + tig0018025:82994-83013 Msa1363040:three_prime_UTR 60.0%
!! GCCCCCAGGGCACTCTTTTA+GGG + tig0018025:82995-83014 Msa1363040:three_prime_UTR 60.0%
!! GCCCTAAAAGAGTGCCCTGG+GGG - tig0018025:82999-83018 None:intergenic 60.0%
GGACTCTGGCTGCTGTGTGC+AGG + tig0018025:81900-81919 Msa1363040:intron 65.0%
TGCCGTAAAGCGGGCAGCCA+TGG + tig0018025:82686-82705 Msa1363040:CDS 65.0%
GCCGTAAAGCGGGCAGCCAT+GGG + tig0018025:82687-82706 Msa1363040:CDS 65.0%
GGAATGGGTGCTCTTGGGGC+TGG + tig0018025:82708-82727 Msa1363040:CDS 65.0%
GGTGCTCTTGGGGCTGGGTA+CGG + tig0018025:82714-82733 Msa1363040:CDS 65.0%
GTGCTCTTGGGGCTGGGTAC+GGG + tig0018025:82715-82734 Msa1363040:CDS 65.0%
TGCTCTTGGGGCTGGGTACG+GGG + tig0018025:82716-82735 Msa1363040:CDS 65.0%
CTTGGGGCTGGGTACGGGGC+AGG + tig0018025:82720-82739 Msa1363040:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0018025 gene 77885 83209 77885 ID=Msa1363040;Name=Msa1363040
tig0018025 mRNA 77885 83209 77885 ID=Msa1363040-mRNA-1;Parent=Msa1363040;Name=Msa1363040-mRNA-1;_AED=0.08;_eAED=0.08;_QI=260|1|1|1|1|1|12|421|405
tig0018025 exon 77885 78228 77885 ID=Msa1363040-mRNA-1:exon:13307;Parent=Msa1363040-mRNA-1
tig0018025 exon 78890 78951 78890 ID=Msa1363040-mRNA-1:exon:13308;Parent=Msa1363040-mRNA-1
tig0018025 exon 79551 79653 79551 ID=Msa1363040-mRNA-1:exon:13309;Parent=Msa1363040-mRNA-1
tig0018025 exon 79867 79943 79867 ID=Msa1363040-mRNA-1:exon:13310;Parent=Msa1363040-mRNA-1
tig0018025 exon 80022 80083 80022 ID=Msa1363040-mRNA-1:exon:13311;Parent=Msa1363040-mRNA-1
tig0018025 exon 80175 80262 80175 ID=Msa1363040-mRNA-1:exon:13312;Parent=Msa1363040-mRNA-1
tig0018025 exon 80411 80486 80411 ID=Msa1363040-mRNA-1:exon:13313;Parent=Msa1363040-mRNA-1
tig0018025 exon 80598 80628 80598 ID=Msa1363040-mRNA-1:exon:13314;Parent=Msa1363040-mRNA-1
tig0018025 exon 81146 81265 81146 ID=Msa1363040-mRNA-1:exon:13315;Parent=Msa1363040-mRNA-1
tig0018025 exon 81694 81779 81694 ID=Msa1363040-mRNA-1:exon:13316;Parent=Msa1363040-mRNA-1
tig0018025 exon 82028 82201 82028 ID=Msa1363040-mRNA-1:exon:13317;Parent=Msa1363040-mRNA-1
tig0018025 exon 82534 83209 82534 ID=Msa1363040-mRNA-1:exon:13318;Parent=Msa1363040-mRNA-1
tig0018025 five_prime_UTR 77885 78144 77885 ID=Msa1363040-mRNA-1:five_prime_utr;Parent=Msa1363040-mRNA-1
tig0018025 CDS 78145 78228 78145 ID=Msa1363040-mRNA-1:cds;Parent=Msa1363040-mRNA-1
tig0018025 CDS 78890 78951 78890 ID=Msa1363040-mRNA-1:cds;Parent=Msa1363040-mRNA-1
tig0018025 CDS 79551 79653 79551 ID=Msa1363040-mRNA-1:cds;Parent=Msa1363040-mRNA-1
tig0018025 CDS 79867 79943 79867 ID=Msa1363040-mRNA-1:cds;Parent=Msa1363040-mRNA-1
tig0018025 CDS 80022 80083 80022 ID=Msa1363040-mRNA-1:cds;Parent=Msa1363040-mRNA-1
tig0018025 CDS 80175 80262 80175 ID=Msa1363040-mRNA-1:cds;Parent=Msa1363040-mRNA-1
tig0018025 CDS 80411 80486 80411 ID=Msa1363040-mRNA-1:cds;Parent=Msa1363040-mRNA-1
tig0018025 CDS 80598 80628 80598 ID=Msa1363040-mRNA-1:cds;Parent=Msa1363040-mRNA-1
tig0018025 CDS 81146 81265 81146 ID=Msa1363040-mRNA-1:cds;Parent=Msa1363040-mRNA-1
tig0018025 CDS 81694 81779 81694 ID=Msa1363040-mRNA-1:cds;Parent=Msa1363040-mRNA-1
tig0018025 CDS 82028 82201 82028 ID=Msa1363040-mRNA-1:cds;Parent=Msa1363040-mRNA-1
tig0018025 CDS 82534 82788 82534 ID=Msa1363040-mRNA-1:cds;Parent=Msa1363040-mRNA-1
tig0018025 three_prime_UTR 82789 83209 82789 ID=Msa1363040-mRNA-1:three_prime_utr;Parent=Msa1363040-mRNA-1
Gene Sequence

>Msa1363040

ATGTTGCCACAGAAGTTTAGGCAGAATCCTCTGATTCAGCAACACTCTCTCTACCAACACCCTGCTCTTATTAATCCTCCACAGATAGAGCCTATCTTGAGTGGAAATCTGCCTCCTGGCTTTGATTCGAGTACTTGCCGCAGTGTTTATGTCGGCAACATTCATCCTCAGGTTTCAGAGCCCCTACTTCAAGAGCTGTTTTCAAGTGCTGGTGCCCTTGAAGGGTGCAAGCTTATTCGAAAAGAAAAGTCATCATATGGCTTCGTGGACTACTTTGATCGCAGTTCAGCTGCAATTGCTATTGTGACTCTCAATGGGAGGAACATTTTTGGGCAGTCTATCAAAGTTAACTGGGCTTATACTCGTGGTCAGAGAGAAGACACATCAGGACACTTCCATATTTTTGTTGGCGACCTTAGTCCCGAGGTTACAGATGCAACTCTGTATGCTTGCTTCTCTGCGTATTCTAGTTGCTCAGATGCAAGGGTAATGTGGGACCAGAAGACAGGCCGATCTAGGGGGTTTGGATTTGTTTCTTTTCGAAATCAGCAGGAAGCCCAAAGTGCCATAAACGATTTAACTGGTAAATGGCTTGGAAGTAGACAGATCCGTTGTAATTGGGCCACAAAAGGAGCTAATATCAATGGTGAAAATCAGAGTTCAGAGTCCAAAAGTGTTGTGGAGTTAACTAGTGGAACATCTGAAGAAGCGCAGGAAATGACCAGTGATGACAGTCCTGAGAAGAATCCTCAATATACCACTGTTTATGTTGGCAATCTTGCTCCCGAGGTTACTACTGTTGATCTCCATCATCATTTTCATGCCCTCGGTGTTGGAACTATTGAAGATGTTAGGGTGCAACGAGACAAAAGTTTTGGGTTTGTGAGATACAGTACCCATGGTGAAGCAGCTCTTGCTATACAGATGGGCAATGCTCGGTTTCTGTTTGGCAAACCTATCAAGTGTTCATGGGGTAGCAAGCCTACTCCTCCAGGAACAGCCTCTACTCCTCTTCCACCACCAGCTTCTACGCATGTACCAGTGCCAGGGTTTTCACCTGCCGGTCTTGCATTGTATGAACGCCAGTTGGCTTTGAGCAAAATGAATGAGGCACATGCCGTAAAGCGGGCAGCCATGGGAATGGGTGCTCTTGGGGCTGGGTACGGGGCAGGATTCCCTAATGTTGCCACCACTCAGCACCTAATGTACTACCAGTAA
Protein sequence

>Msa1363040

MLPQKFRQNPLIQQHSLYQHPALINPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVSEPLLQELFSSAGALEGCKLIRKEKSSYGFVDYFDRSSAAIAIVTLNGRNIFGQSIKVNWAYTRGQREDTSGHFHIFVGDLSPEVTDATLYACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIRCNWATKGANINGENQSSESKSVVELTSGTSEEAQEMTSDDSPEKNPQYTTVYVGNLAPEVTTVDLHHHFHALGVGTIEDVRVQRDKSFGFVRYSTHGEAALAIQMGNARFLFGKPIKCSWGSKPTPPGTASTPLPPPASTHVPVPGFSPAGLALYERQLALSKMNEAHAVKRAAMGMGALGAGYGAGFPNVATTQHLMYYQ*