Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1304130 | XP_013445938.1 | 93.262 | 282 | 6 | 1 | 1 | 269 | 61 | 342 | 0.0 | 543 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1304130 | sp|Q9ZTR0|SPDS2_PEA | 91.844 | 282 | 10 | 1 | 1 | 269 | 61 | 342 | 0.0 | 536 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1304130 | A0A072U2G1 | 93.262 | 282 | 6 | 1 | 1 | 269 | 61 | 342 | 0.0 | 543 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0011850 | Msa1304130 | 0.806282 | 8.872257e-50 | -8.615850e-47 |
Msa0105340 | Msa1304130 | 0.801742 | 7.801788e-49 | -8.615850e-47 |
Msa1304130 | Msa1327760 | 0.889453 | 2.390322e-73 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1304130 | MtrunA17_Chr8g0365071 | 93.262 | 282 | 6 | 1 | 1 | 269 | 61 | 342 | 0.0 | 543 |
Msa1304130 | MtrunA17_Chr5g0413701 | 84.752 | 282 | 30 | 1 | 1 | 269 | 62 | 343 | 0.0 | 502 |
Msa1304130 | MtrunA17_Chr3g0126551 | 67.626 | 278 | 76 | 2 | 1 | 264 | 76 | 353 | 5.49e-133 | 380 |
Msa1304130 | MtrunA17_Chr3g0117881 | 59.507 | 284 | 98 | 2 | 1 | 267 | 51 | 334 | 5.90e-131 | 374 |
Msa1304130 | MtrunA17_Chr1g0158851 | 65.108 | 278 | 82 | 3 | 1 | 264 | 81 | 357 | 1.18e-125 | 362 |
Msa1304130 | MtrunA17_Chr5g0394371 | 34.802 | 227 | 128 | 8 | 11 | 220 | 42 | 265 | 5.47e-35 | 128 |
Msa1304130 | MtrunA17_Chr1g0150851 | 30.603 | 232 | 142 | 6 | 8 | 222 | 56 | 285 | 5.91e-33 | 123 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1304130 | AT1G23820.1 | 80.851 | 282 | 40 | 2 | 1 | 269 | 54 | 334 | 9.77e-172 | 478 |
Msa1304130 | AT1G70310.1 | 79.505 | 283 | 44 | 2 | 1 | 269 | 58 | 340 | 4.62e-167 | 466 |
Msa1304130 | AT1G23820.2 | 83.028 | 218 | 24 | 1 | 1 | 205 | 98 | 315 | 5.61e-134 | 382 |
Msa1304130 | AT5G53120.1 | 66.786 | 280 | 78 | 3 | 1 | 266 | 77 | 355 | 2.19e-132 | 379 |
Msa1304130 | AT5G53120.4 | 66.786 | 280 | 78 | 3 | 1 | 266 | 77 | 355 | 2.19e-132 | 379 |
Msa1304130 | AT5G53120.2 | 66.786 | 280 | 78 | 3 | 1 | 266 | 77 | 355 | 2.19e-132 | 379 |
Msa1304130 | AT5G53120.5 | 66.786 | 280 | 78 | 3 | 1 | 266 | 77 | 355 | 2.19e-132 | 379 |
Msa1304130 | AT5G53120.3 | 66.786 | 280 | 78 | 3 | 1 | 266 | 77 | 355 | 2.19e-132 | 379 |
Msa1304130 | AT5G53120.7 | 66.786 | 280 | 78 | 3 | 1 | 266 | 94 | 372 | 5.17e-132 | 379 |
Msa1304130 | AT5G53120.6 | 58.306 | 307 | 86 | 5 | 1 | 266 | 77 | 382 | 4.55e-128 | 369 |
Msa1304130 | AT5G19530.1 | 30.451 | 266 | 162 | 8 | 8 | 256 | 47 | 306 | 2.24e-35 | 129 |
Msa1304130 | AT5G19530.2 | 30.739 | 257 | 155 | 8 | 8 | 247 | 40 | 290 | 2.50e-35 | 129 |
Find 60 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTGGAAGACCATGACTTTC+TGG | 0.202805 | 8_3:+67395525 | None:intergenic |
GAGAAGTAACTGTTTATTTC+AGG | 0.232605 | 8_3:-67392336 | Msa1304130:three_prime_UTR |
GTATCTTAGGTTCTTTGATT+TGG | 0.272891 | 8_3:-67392104 | Msa1304130:three_prime_UTR |
CTCTATTTCTAACCCCAAAA+AGG | 0.307016 | 8_3:-67395301 | Msa1304130:intron |
GGTGTTTCATCTGTGATTCC+TGG | 0.309804 | 8_3:-67398668 | Msa1304130:five_prime_UTR |
CCAGAAAGTCATGGTCTTCC+AGG | 0.315838 | 8_3:-67395525 | Msa1304130:intron |
TGGCGTGTCTTGAATGCTTT+TGG | 0.323325 | 8_3:-67392126 | Msa1304130:three_prime_UTR |
CAGGATAATGACAAAGTTGA+TGG | 0.324169 | 8_3:-67392317 | Msa1304130:three_prime_UTR |
TTGGTTATTGGTGGAGGTGA+TGG | 0.328542 | 8_3:-67394910 | Msa1304130:CDS |
TTTGAAAATCTGACGACAAT+TGG | 0.351640 | 8_3:+67393776 | None:intergenic |
ACTGCATCATAAGTTCCTTC+TGG | 0.359338 | 8_3:+67394049 | None:intergenic |
GCAGATGAGTGATCATTTCT+TGG | 0.367323 | 8_3:+67395331 | None:intergenic |
CATTTGTGAAATTGACAATA+TGG | 0.376368 | 8_3:-67394839 | Msa1304130:CDS |
TTAAACCCTACTGCAACTTC+AGG | 0.398829 | 8_3:+67394408 | None:intergenic |
GCACTCAGGCTGAAAGTATA+TGG | 0.405219 | 8_3:-67393830 | Msa1304130:CDS |
AACTTATGATGCAGTTATAG+TGG | 0.422946 | 8_3:-67394041 | Msa1304130:CDS |
TACTTCTCGACATCAAATTT+AGG | 0.427367 | 8_3:+67392351 | None:intergenic |
GTTATTGGTGGAGGTGATGG+TGG | 0.427899 | 8_3:-67394907 | Msa1304130:CDS |
GTGGATTCATCTGATCCTAT+TGG | 0.434928 | 8_3:-67394022 | Msa1304130:intron |
AAAACTAACCTGGCCACATT+GGG | 0.439033 | 8_3:+67398627 | None:intergenic |
CGAGTAAAAGATATGAATGA+TGG | 0.469620 | 8_3:+67392412 | None:intergenic |
TGAAAGTATATGGCTTCATA+TGG | 0.483697 | 8_3:-67393820 | Msa1304130:CDS |
AAGGCTCTGTCAATTATGCT+TGG | 0.485127 | 8_3:-67393755 | Msa1304130:CDS |
AAAACATACCTTGGATATGT+AGG | 0.492840 | 8_3:+67393723 | None:intergenic |
GAAATTAGCCCAATGTGGCC+AGG | 0.496157 | 8_3:-67398635 | Msa1304130:intron |
GTGTTTCATCTGTGATTCCT+GGG | 0.503605 | 8_3:-67398667 | Msa1304130:five_prime_UTR |
TCGTTTGCGAGGAGGAAGAT+TGG | 0.509808 | 8_3:-67392495 | Msa1304130:CDS |
GTGGCAAGGGCTCTTCGTCC+AGG | 0.512123 | 8_3:-67393864 | Msa1304130:CDS |
TATGTTGAAACATGATTAGC+TGG | 0.516037 | 8_3:-67392255 | Msa1304130:three_prime_UTR |
TGAGTGCACATAACTCCTCC+TGG | 0.525919 | 8_3:+67393846 | None:intergenic |
CAAACATCCAGTGAATCCTA+TGG | 0.529311 | 8_3:-67392706 | Msa1304130:CDS |
TAAACCCTACTGCAACTTCA+GGG | 0.530870 | 8_3:+67394409 | None:intergenic |
GCTTCATATGGATATAATTG+AGG | 0.531349 | 8_3:-67393808 | Msa1304130:CDS |
TTTATGCTTTGCTCAACTGA+GGG | 0.534590 | 8_3:-67392744 | Msa1304130:CDS |
ATATCCTTAAGGTCCTGCTC+AGG | 0.540360 | 8_3:-67393916 | Msa1304130:intron |
ATGAGTGATCATTTCTTGGT+AGG | 0.543438 | 8_3:+67395335 | None:intergenic |
GAGTTATTCAGCTCACAGAA+AGG | 0.548553 | 8_3:-67395368 | Msa1304130:CDS |
TTAGGCACCGACTTATTCCA+TGG | 0.563264 | 8_3:+67392369 | None:intergenic |
CTCGATTGGTCATCTATCAA+CGG | 0.564251 | 8_3:-67392393 | Msa1304130:three_prime_UTR |
GCAGTCATCAACATATGGCA+AGG | 0.564879 | 8_3:-67395406 | Msa1304130:intron |
AGTTATTCAGCTCACAGAAA+GGG | 0.568813 | 8_3:-67395367 | Msa1304130:CDS |
TCTGTTTGCCGTCGTTTGCG+AGG | 0.581679 | 8_3:-67392506 | Msa1304130:CDS |
TCAGAGTTGTAAAATTTGAG+TGG | 0.611670 | 8_3:+67392654 | None:intergenic |
AGCAATGTGATTGAAAGTCT+AGG | 0.613591 | 8_3:-67392058 | Msa1304130:three_prime_UTR |
AGGAGGAGTTATGTGCACTC+AGG | 0.621343 | 8_3:-67393844 | Msa1304130:CDS |
AAGCATTCAAGACACGCCAC+AGG | 0.623562 | 8_3:+67392130 | None:intergenic |
GTTTGCCGTCGTTTGCGAGG+AGG | 0.626127 | 8_3:-67392503 | Msa1304130:CDS |
TGAGCTCAAAGTAGCTCATG+TGG | 0.628171 | 8_3:-67392445 | Msa1304130:three_prime_UTR |
CAACGGACCATGGAATAAGT+CGG | 0.630265 | 8_3:-67392376 | Msa1304130:three_prime_UTR |
GGGTTAGAAATAGAGCAAAG+AGG | 0.632220 | 8_3:+67395309 | None:intergenic |
CTACAGTTCCTACATATCCA+AGG | 0.636790 | 8_3:-67393731 | Msa1304130:intron |
GGTCATCTATCAACGGACCA+TGG | 0.641202 | 8_3:-67392386 | Msa1304130:three_prime_UTR |
GTCAGATTACCAGAAAGTCA+TGG | 0.643976 | 8_3:-67395534 | Msa1304130:CDS |
ATCTTCCTCCTCGCAAACGA+CGG | 0.645194 | 8_3:+67392498 | None:intergenic |
AATGACGTGCTACTTCTCGC+AGG | 0.646893 | 8_3:+67394881 | None:intergenic |
TTTCATCTGTGATTCCTGGG+TGG | 0.656590 | 8_3:-67398664 | Msa1304130:five_prime_UTR |
GCAAGGGCTCTTCGTCCAGG+AGG | 0.657812 | 8_3:-67393861 | Msa1304130:CDS |
GGATGTTTGAAATCAACAAG+AGG | 0.663795 | 8_3:+67392720 | None:intergenic |
TTTCTGAAATTAGCCCAATG+TGG | 0.672641 | 8_3:-67398640 | Msa1304130:exon |
CTAATTTCAGAAAACCACCC+AGG | 0.684797 | 8_3:+67398650 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATATATATATATATATAT+AGG | + | chr8_3:67393904-67393923 | None:intergenic | 0.0% |
!! | TTGATAGAATATATATTTAA+CGG | - | chr8_3:67393995-67394014 | Msa1304130:intron | 10.0% |
!!! | TATTTTTGACAAAATAAATT+CGG | - | chr8_3:67395047-67395066 | Msa1304130:intron | 10.0% |
!! | TACATCAAATAAAAAAAAAT+TGG | + | chr8_3:67396135-67396154 | None:intergenic | 10.0% |
!!! | AATTTTTTTTTATTTGATGT+AGG | - | chr8_3:67396134-67396153 | Msa1304130:intron | 10.0% |
!! | AAATTAAACACAAATATTTA+AGG | + | chr8_3:67396387-67396406 | None:intergenic | 10.0% |
!! | CATTCATTAGATATAATAAA+CGG | - | chr8_3:67393577-67393596 | Msa1304130:intron | 15.0% |
!! | ATAATTCAAATTGAATCAAT+TGG | - | chr8_3:67394031-67394050 | Msa1304130:CDS | 15.0% |
!! | CATCCATTAAATATAATAAA+CGG | + | chr8_3:67394375-67394394 | None:intergenic | 15.0% |
!! | TTGTAAAAAACAAAGTATAT+TGG | - | chr8_3:67395480-67395499 | Msa1304130:intron | 15.0% |
!! | TGTAAAAAACAAAGTATATT+GGG | - | chr8_3:67395481-67395500 | Msa1304130:intron | 15.0% |
!!! | CAAAATAATAAAATTTTGTG+TGG | + | chr8_3:67395915-67395934 | None:intergenic | 15.0% |
!!! | AATAACATGATTTTAAATTG+TGG | - | chr8_3:67395951-67395970 | Msa1304130:intron | 15.0% |
!!! | ATATTTTTATATTGTGATTC+TGG | + | chr8_3:67396053-67396072 | None:intergenic | 15.0% |
!! | AAAAAAAGTTTATATCACTT+AGG | + | chr8_3:67396749-67396768 | None:intergenic | 15.0% |
!!! | TCCTATGTTTTTTTTAATAA+TGG | - | chr8_3:67397453-67397472 | Msa1304130:intron | 15.0% |
!!! | TTTCATTTTTTTGTTATAGT+GGG | - | chr8_3:67397935-67397954 | Msa1304130:intron | 15.0% |
!!! | TAATTTTTATCTTCATCATT+TGG | - | chr8_3:67398132-67398151 | Msa1304130:intron | 15.0% |
!! | AGAAAAAAAAAAAACTAACC+TGG | + | chr8_3:67392097-67392116 | None:intergenic | 20.0% |
!! | ATTATTGTGTTTAAACTTGT+TGG | - | chr8_3:67392345-67392364 | Msa1304130:three_prime_UTR | 20.0% |
!! | AAGTAATTGAATGTAATAAC+AGG | + | chr8_3:67392502-67392521 | None:intergenic | 20.0% |
!! | CTTATTGTGTTTAAACTTAT+TGG | - | chr8_3:67392616-67392635 | Msa1304130:intron | 20.0% |
!!! | TGATTTTCTCAAATTATTAG+CGG | - | chr8_3:67392806-67392825 | Msa1304130:intron | 20.0% |
!!! | TAAGATTTAATTTACAACCA+TGG | + | chr8_3:67393704-67393723 | None:intergenic | 20.0% |
!! | GAAAACAAGATTATAATAGA+AGG | - | chr8_3:67393729-67393748 | Msa1304130:intron | 20.0% |
!! | AATAAAAGAAAAAGTAGGAA+AGG | + | chr8_3:67393763-67393782 | None:intergenic | 20.0% |
!! | TGATCAATAAAAGAAAAAGT+AGG | + | chr8_3:67393768-67393787 | None:intergenic | 20.0% |
!! | AAGCCGTTTATTATATTTAA+TGG | - | chr8_3:67394369-67394388 | Msa1304130:intron | 20.0% |
!!! | TCATGATTATTTTGCATAAA+TGG | - | chr8_3:67394541-67394560 | Msa1304130:intron | 20.0% |
!!! | CATGATTATTTTGCATAAAT+GGG | - | chr8_3:67394542-67394561 | Msa1304130:intron | 20.0% |
!!! | CTCTGTATATATTTTTTACT+GGG | - | chr8_3:67394723-67394742 | Msa1304130:intron | 20.0% |
!!! | TCTTCAGATTATCTTTTTAT+CGG | - | chr8_3:67394924-67394943 | Msa1304130:intron | 20.0% |
!!! | ATAGAAAAGATTTTGTTTCA+AGG | - | chr8_3:67395151-67395170 | Msa1304130:intron | 20.0% |
!!! | TAATTTTCTGTTTTAGGTTT+TGG | - | chr8_3:67395782-67395801 | Msa1304130:intron | 20.0% |
!!! | AAAATCATGTTATTTAGCTT+AGG | + | chr8_3:67395945-67395964 | None:intergenic | 20.0% |
!!! | TTATTCTGTTCTTTTTTAGT+CGG | - | chr8_3:67396185-67396204 | Msa1304130:intron | 20.0% |
!! | CGTTATATTTAATATCCTTA+AGG | - | chr8_3:67396784-67396803 | Msa1304130:intron | 20.0% |
!! | AAAATTCCATGATATAAACA+CGG | - | chr8_3:67397166-67397185 | Msa1304130:intron | 20.0% |
!! | GCCATTATTAAAAAAAACAT+AGG | + | chr8_3:67397457-67397476 | None:intergenic | 20.0% |
!!! | GTTTTTTTTAATAATGGCAA+AGG | - | chr8_3:67397459-67397478 | Msa1304130:intron | 20.0% |
!! | TCCTATGTATTAATTATTAC+AGG | - | chr8_3:67397487-67397506 | Msa1304130:intron | 20.0% |
!! | ACCTGTAATAATTAATACAT+AGG | + | chr8_3:67397491-67397510 | None:intergenic | 20.0% |
!! | TTATTACAGGTTAAGTTTAT+AGG | - | chr8_3:67397500-67397519 | Msa1304130:intron | 20.0% |
!! | AAAGACAAAAAACGATAAAA+AGG | + | chr8_3:67397809-67397828 | None:intergenic | 20.0% |
!! | AAATGAAAGAAATATTACGA+TGG | + | chr8_3:67397923-67397942 | None:intergenic | 20.0% |
!!! | CTTTCATTTTTTTGTTATAG+TGG | - | chr8_3:67397934-67397953 | Msa1304130:intron | 20.0% |
! | TTTATAACCAACATGCAAAA+GGG | + | chr8_3:67392133-67392152 | None:intergenic | 25.0% |
!! | TTTTATAACCAACATGCAAA+AGG | + | chr8_3:67392134-67392153 | None:intergenic | 25.0% |
! | AACTAACTAAACACACAAAA+AGG | + | chr8_3:67392163-67392182 | None:intergenic | 25.0% |
!!! | TTTGTGTTTTTGTTTGGTTA+TGG | - | chr8_3:67392368-67392387 | Msa1304130:three_prime_UTR | 25.0% |
!!! | TATTGGTTTGTGTTTTTGTA+TGG | - | chr8_3:67392633-67392652 | Msa1304130:intron | 25.0% |
!!! | TTTGTGTTTTTGTATGGTTA+TGG | - | chr8_3:67392639-67392658 | Msa1304130:intron | 25.0% |
!!! | ATGGAAAACTTAACTTGTAT+TGG | - | chr8_3:67392658-67392677 | Msa1304130:CDS | 25.0% |
!!! | ACTTAACTTGTATTGGTTTT+TGG | - | chr8_3:67392665-67392684 | Msa1304130:CDS | 25.0% |
!!! | CTTAACTTGTATTGGTTTTT+GGG | - | chr8_3:67392666-67392685 | Msa1304130:CDS | 25.0% |
! | TTCAGTGTAACTATAAATGT+CGG | + | chr8_3:67392781-67392800 | None:intergenic | 25.0% |
! | ATTTCCAGTGTTATAATTTG+CGG | - | chr8_3:67393151-67393170 | Msa1304130:intron | 25.0% |
!! | CAATTTGTTTAAATTCCTCT+AGG | - | chr8_3:67393277-67393296 | Msa1304130:intron | 25.0% |
! | TTGTCAAATAGTAACTACAT+CGG | + | chr8_3:67393311-67393330 | None:intergenic | 25.0% |
! | TAGTTACTATTTGACAACAT+TGG | - | chr8_3:67393314-67393333 | Msa1304130:intron | 25.0% |
! | AAATTTCATATCTATGACCA+GGG | + | chr8_3:67393494-67393513 | None:intergenic | 25.0% |
! | TAAATTTCATATCTATGACC+AGG | + | chr8_3:67393495-67393514 | None:intergenic | 25.0% |
! | TGGTCATAGATATGAAATTT+AGG | - | chr8_3:67393494-67393513 | Msa1304130:intron | 25.0% |
! | ACAAGATTATAATAGAAGGA+AGG | - | chr8_3:67393733-67393752 | Msa1304130:CDS | 25.0% |
!! | TATTTGCATCAATCTTTTGA+AGG | - | chr8_3:67393919-67393938 | Msa1304130:intron | 25.0% |
!! | TATTTAACGGATCTATCTTT+CGG | - | chr8_3:67394008-67394027 | Msa1304130:intron | 25.0% |
! | ATGTATGGAATATATGACAA+AGG | + | chr8_3:67394113-67394132 | None:intergenic | 25.0% |
! | TATATTCCATACATAAGACT+AGG | - | chr8_3:67394119-67394138 | Msa1304130:intron | 25.0% |
! | TATCAATGATCTTAACTGTT+TGG | - | chr8_3:67394494-67394513 | Msa1304130:intron | 25.0% |
! | ATCAATGATCTTAACTGTTT+GGG | - | chr8_3:67394495-67394514 | Msa1304130:intron | 25.0% |
! | ATGCCTTTCTATATATTTAC+AGG | + | chr8_3:67394571-67394590 | None:intergenic | 25.0% |
!!! | GCTCTGTATATATTTTTTAC+TGG | - | chr8_3:67394722-67394741 | Msa1304130:intron | 25.0% |
! | CTAACAAAAGAATATTTGCT+TGG | + | chr8_3:67394810-67394829 | None:intergenic | 25.0% |
!!! | TTTTTTGTTATACCAATCCT+AGG | - | chr8_3:67394841-67394860 | Msa1304130:CDS | 25.0% |
!!! | GCAAATTTTTCTAAGGATTT+TGG | + | chr8_3:67395018-67395037 | None:intergenic | 25.0% |
!! | GACAAAATAAATTCGGTTTT+TGG | - | chr8_3:67395054-67395073 | Msa1304130:intron | 25.0% |
! | AAAACTCATGAATTAAACTC+TGG | - | chr8_3:67395094-67395113 | Msa1304130:intron | 25.0% |
!! | CAAAATCTTTTCTATCTTCA+AGG | + | chr8_3:67395146-67395165 | None:intergenic | 25.0% |
!! | AAGTATAAATGACCTTTTTG+GGG | + | chr8_3:67395425-67395444 | None:intergenic | 25.0% |
!! | GAAGTATAAATGACCTTTTT+GGG | + | chr8_3:67395426-67395445 | None:intergenic | 25.0% |
!!! | AGAAGTATAAATGACCTTTT+TGG | + | chr8_3:67395427-67395446 | None:intergenic | 25.0% |
!! | TCACTGTAATTTTCTGTTTT+AGG | - | chr8_3:67395776-67395795 | Msa1304130:intron | 25.0% |
! | CATTTGTGAAATTGACAATA+TGG | - | chr8_3:67395872-67395891 | Msa1304130:intron | 25.0% |
!! | TATTGACTAAATTATCTTGC+TGG | - | chr8_3:67396070-67396089 | Msa1304130:intron | 25.0% |
! | TTAAGGAAACATATTAGTGT+AGG | + | chr8_3:67396370-67396389 | None:intergenic | 25.0% |
! | GTAAAAAATCTTTACACTGA+CGG | - | chr8_3:67396532-67396551 | Msa1304130:intron | 25.0% |
! | ATAAATATGACTTCTCAATG+AGG | + | chr8_3:67396589-67396608 | None:intergenic | 25.0% |
! | TAGATTACAAAAACATACCT+TGG | + | chr8_3:67397000-67397019 | None:intergenic | 25.0% |
!! | GTGTTTATATCATGGAATTT+TGG | + | chr8_3:67397167-67397186 | None:intergenic | 25.0% |
!!! | TAACATACCCTTTTCTAAAA+CGG | - | chr8_3:67397307-67397326 | Msa1304130:intron | 25.0% |
! | AATTTCATATGACCAATTTG+CGG | + | chr8_3:67397539-67397558 | None:intergenic | 25.0% |
!! | TTTGCATTGAAATTTTGCTT+GGG | + | chr8_3:67397570-67397589 | None:intergenic | 25.0% |
!! | ATTTGCATTGAAATTTTGCT+TGG | + | chr8_3:67397571-67397590 | None:intergenic | 25.0% |
! | AGCAAAATTTCAATGCAAAT+CGG | - | chr8_3:67397571-67397590 | Msa1304130:intron | 25.0% |
! | TTGTATTAAATAGCGTATCT+TGG | - | chr8_3:67397684-67397703 | Msa1304130:intron | 25.0% |
!!! | TTTTTGTCTTTATTTCCTCT+AGG | - | chr8_3:67397818-67397837 | Msa1304130:intron | 25.0% |
!! | ATTCATATCTTTTACTCGAT+TGG | - | chr8_3:67398304-67398323 | Msa1304130:intron | 25.0% |
!!! | TGTTGGTTTGTGTTTTTGTT+TGG | - | chr8_3:67392362-67392381 | Msa1304130:three_prime_UTR | 30.0% |
!! | TTATGTTTAGTTCTGTGTAG+CGG | - | chr8_3:67392414-67392433 | Msa1304130:three_prime_UTR | 30.0% |
TTGAATGTAATAACAGGTGT+TGG | + | chr8_3:67392496-67392515 | None:intergenic | 30.0% | |
!!! | TTTTTGGGTTCAACTTAATG+TGG | - | chr8_3:67392681-67392700 | Msa1304130:CDS | 30.0% |
TTGATTCAATACGTGTATGT+AGG | + | chr8_3:67393083-67393102 | None:intergenic | 30.0% | |
TAATCACACAGACATATAAC+AGG | + | chr8_3:67393362-67393381 | None:intergenic | 30.0% | |
TTATATGTCTGTGTGATTAG+TGG | - | chr8_3:67393363-67393382 | Msa1304130:intron | 30.0% | |
TTCTTTGACATATGAACATG+TGG | - | chr8_3:67393408-67393427 | Msa1304130:intron | 30.0% | |
!!! | TTGGTTAAGCCATTTTTTCT+TGG | - | chr8_3:67393445-67393464 | Msa1304130:intron | 30.0% |
TAATTTACAACCATGGAGAA+AGG | + | chr8_3:67393697-67393716 | None:intergenic | 30.0% | |
! | TTCTTTTATTGATCAGCAAC+AGG | - | chr8_3:67393773-67393792 | Msa1304130:CDS | 30.0% |
TTCACAACTTGGAATTGATT+TGG | - | chr8_3:67393797-67393816 | Msa1304130:CDS | 30.0% | |
! | TCACAACTTGGAATTGATTT+GGG | - | chr8_3:67393798-67393817 | Msa1304130:CDS | 30.0% |
!! | ATTTGGGGATTTGATTTTGT+TGG | - | chr8_3:67393814-67393833 | Msa1304130:CDS | 30.0% |
TATTGATCGTCATGTCATAT+AGG | + | chr8_3:67394071-67394090 | None:intergenic | 30.0% | |
TATGGAATATATGACAAAGG+TGG | + | chr8_3:67394110-67394129 | None:intergenic | 30.0% | |
AATGTTGAGATGGTGAAATA+CGG | - | chr8_3:67394161-67394180 | Msa1304130:intron | 30.0% | |
! | TGAAATACGGATTTGAAACA+AGG | - | chr8_3:67394174-67394193 | Msa1304130:intron | 30.0% |
! | GAAATACGGATTTGAAACAA+GGG | - | chr8_3:67394175-67394194 | Msa1304130:intron | 30.0% |
! | TTTGTAGGTATTGTACAGAA+GGG | - | chr8_3:67394251-67394270 | Msa1304130:intron | 30.0% |
CAATAAATAAGAGTTCTCAC+CGG | - | chr8_3:67394418-67394437 | Msa1304130:CDS | 30.0% | |
!! | GATTATTTTGCATAAATGGG+CGG | - | chr8_3:67394545-67394564 | Msa1304130:intron | 30.0% |
AATACATAGCAATCTTTGCA+AGG | + | chr8_3:67394669-67394688 | None:intergenic | 30.0% | |
AGAGAGGTTCAATGATAAAA+CGG | + | chr8_3:67394693-67394712 | None:intergenic | 30.0% | |
ACATAGTTGAGTTCATCTTA+TGG | - | chr8_3:67394953-67394972 | Msa1304130:intron | 30.0% | |
! | ACTGTGTGCAAATTTTTCTA+AGG | + | chr8_3:67395025-67395044 | None:intergenic | 30.0% |
!! | ATATGGCAAGGTTTTTGTTT+TGG | - | chr8_3:67395317-67395336 | Msa1304130:CDS | 30.0% |
! | ATTGAGTTGTTTATCCAAAC+TGG | - | chr8_3:67395671-67395690 | Msa1304130:intron | 30.0% |
ATATAGACATAAGTCCAGTT+TGG | + | chr8_3:67395688-67395707 | None:intergenic | 30.0% | |
!!! | CTGTTTTAGGTTTTGGTTAT+TGG | - | chr8_3:67395789-67395808 | Msa1304130:intron | 30.0% |
!!! | TTTTAGGTTTTGGTTATTGG+TGG | - | chr8_3:67395792-67395811 | Msa1304130:intron | 30.0% |
TTAAATTGTGGTCACAACTA+TGG | - | chr8_3:67395963-67395982 | Msa1304130:intron | 30.0% | |
CATAAAATTGAACACAGATG+AGG | + | chr8_3:67396007-67396026 | None:intergenic | 30.0% | |
! | TGATGTAGGATTTTCTACTT+AGG | - | chr8_3:67396148-67396167 | Msa1304130:intron | 30.0% |
! | GATGTAGGATTTTCTACTTA+GGG | - | chr8_3:67396149-67396168 | Msa1304130:intron | 30.0% |
! | GATTTTCTACTTAGGGAAAT+TGG | - | chr8_3:67396156-67396175 | Msa1304130:intron | 30.0% |
AAAGTATAGTCTCTATTGCT+CGG | - | chr8_3:67396213-67396232 | Msa1304130:intron | 30.0% | |
AACTTCAGGGAAAAATTGTT+TGG | + | chr8_3:67396292-67396311 | None:intergenic | 30.0% | |
AACTTATGATGCAGTTATAG+TGG | - | chr8_3:67396670-67396689 | Msa1304130:intron | 30.0% | |
! | TGAAAGTATATGGCTTCATA+TGG | - | chr8_3:67396891-67396910 | Msa1304130:intron | 30.0% |
GCTTCATATGGATATAATTG+AGG | - | chr8_3:67396903-67396922 | Msa1304130:intron | 30.0% | |
TTTGAAAATCTGACGACAAT+TGG | + | chr8_3:67396938-67396957 | None:intergenic | 30.0% | |
! | AATTGTCGTCAGATTTTCAA+AGG | - | chr8_3:67396937-67396956 | Msa1304130:intron | 30.0% |
AAAACATACCTTGGATATGT+AGG | + | chr8_3:67396991-67397010 | None:intergenic | 30.0% | |
CAACATTTCTCTTCTCAAAT+AGG | + | chr8_3:67397027-67397046 | None:intergenic | 30.0% | |
CTATTTGAGAAGAGAAATGT+TGG | - | chr8_3:67397025-67397044 | Msa1304130:intron | 30.0% | |
AAATCACATGTTCAAGTCAT+AGG | - | chr8_3:67397054-67397073 | Msa1304130:intron | 30.0% | |
CATTTACAAACATTTGCAAG+AGG | + | chr8_3:67397085-67397104 | None:intergenic | 30.0% | |
AAGATAAGATTGTCCACAAT+AGG | - | chr8_3:67397106-67397125 | Msa1304130:intron | 30.0% | |
!! | AGAAAAATAGCGGATACAAT+AGG | - | chr8_3:67397213-67397232 | Msa1304130:intron | 30.0% |
!! | GAAAAATAGCGGATACAATA+GGG | - | chr8_3:67397214-67397233 | Msa1304130:intron | 30.0% |
!!! | AACATACCCTTTTCTAAAAC+GGG | - | chr8_3:67397308-67397327 | Msa1304130:intron | 30.0% |
CAAACAGGGAAATAGAAAAA+GGG | + | chr8_3:67397385-67397404 | None:intergenic | 30.0% | |
TCAAACAGGGAAATAGAAAA+AGG | + | chr8_3:67397386-67397405 | None:intergenic | 30.0% | |
ATGGTAATTATACCGCAAAT+TGG | - | chr8_3:67397524-67397543 | Msa1304130:intron | 30.0% | |
! | TTGCATTGAAATTTTGCTTG+GGG | + | chr8_3:67397569-67397588 | None:intergenic | 30.0% |
GTATTGCATATTGGATTACT+GGG | + | chr8_3:67397732-67397751 | None:intergenic | 30.0% | |
AGTATTGCATATTGGATTAC+TGG | + | chr8_3:67397733-67397752 | None:intergenic | 30.0% | |
! | AAAGCACTAGTATTGCATAT+TGG | + | chr8_3:67397741-67397760 | None:intergenic | 30.0% |
! | ATACTACTCTTTTTGTGTTG+AGG | - | chr8_3:67397876-67397895 | Msa1304130:intron | 30.0% |
!! | TTTTGTTATAGTGGGATGAT+TGG | - | chr8_3:67397943-67397962 | Msa1304130:intron | 30.0% |
TCAGAGTTGTAAAATTTGAG+TGG | + | chr8_3:67398060-67398079 | None:intergenic | 30.0% | |
! | ACTCAAATTTTACAACTCTG+AGG | - | chr8_3:67398059-67398078 | Msa1304130:intron | 30.0% |
! | AGAATCTTCTCAGTTTTCTT+TGG | + | chr8_3:67398244-67398263 | None:intergenic | 30.0% |
CGAGTAAAAGATATGAATGA+TGG | + | chr8_3:67398302-67398321 | None:intergenic | 30.0% | |
TACTTCTCGACATCAAATTT+AGG | + | chr8_3:67398363-67398382 | None:intergenic | 30.0% | |
GAGAAGTAACTGTTTATTTC+AGG | - | chr8_3:67398375-67398394 | Msa1304130:intron | 30.0% | |
TATGTTGAAACATGATTAGC+TGG | - | chr8_3:67398456-67398475 | Msa1304130:intron | 30.0% | |
! | GATTGAGATGCATTCTTTTA+TGG | - | chr8_3:67398552-67398571 | Msa1304130:intron | 30.0% |
! | TTGAATGCTTTTGGTATCTT+AGG | - | chr8_3:67398594-67398613 | Msa1304130:intron | 30.0% |
GTATCTTAGGTTCTTTGATT+TGG | - | chr8_3:67398607-67398626 | Msa1304130:intron | 30.0% | |
!! | TTTCTGAAATTAGCCCAATG+TGG | - | chr8_3:67392071-67392090 | Msa1304130:three_prime_UTR | 35.0% |
! | CTTAATACCCTTTTGCATGT+TGG | - | chr8_3:67392123-67392142 | Msa1304130:three_prime_UTR | 35.0% |
! | ACGTCTTCAATAAGAAGTGT+CGG | + | chr8_3:67392208-67392227 | None:intergenic | 35.0% |
CTTCTTATTGAAGACGTGTT+TGG | - | chr8_3:67392211-67392230 | Msa1304130:three_prime_UTR | 35.0% | |
CACTGACACATTAAAAACTG+AGG | + | chr8_3:67392280-67392299 | None:intergenic | 35.0% | |
TATACGTGTCAGTGATTCAT+AGG | - | chr8_3:67392573-67392592 | Msa1304130:intron | 35.0% | |
TGATTCATAGGTTTAGTTGC+TGG | - | chr8_3:67392585-67392604 | Msa1304130:intron | 35.0% | |
GATTCATAGGTTTAGTTGCT+GGG | - | chr8_3:67392586-67392605 | Msa1304130:intron | 35.0% | |
TAATGTGGAGCTATAAACCA+CGG | - | chr8_3:67392696-67392715 | Msa1304130:CDS | 35.0% | |
TATAAACCACGGACACTTAT+TGG | - | chr8_3:67392707-67392726 | Msa1304130:CDS | 35.0% | |
!! | TATAAATGTCGGTGTCATGT+CGG | + | chr8_3:67392770-67392789 | None:intergenic | 35.0% |
TCTCAAATTATTAGCGGTGT+CGG | - | chr8_3:67392812-67392831 | Msa1304130:intron | 35.0% | |
TGAGTGAAGAGATTTGGATT+TGG | - | chr8_3:67392905-67392924 | Msa1304130:intron | 35.0% | |
TTCAGAATCAGAGTGCAAAA+CGG | + | chr8_3:67392991-67393010 | None:intergenic | 35.0% | |
! | TGCACTCTGATTCTGAAAAT+TGG | - | chr8_3:67392994-67393013 | Msa1304130:intron | 35.0% |
TGATCCGCAAATTATAACAC+TGG | + | chr8_3:67393158-67393177 | None:intergenic | 35.0% | |
TGTCAAATAACAGCTACTGT+GGG | + | chr8_3:67393221-67393240 | None:intergenic | 35.0% | |
TTGTCAAATAACAGCTACTG+TGG | + | chr8_3:67393222-67393241 | None:intergenic | 35.0% | |
CATATGAACATGTGGTAGTT+TGG | - | chr8_3:67393416-67393435 | Msa1304130:intron | 35.0% | |
!!! | GCCATTTTTTCTTGGTTTAC+CGG | - | chr8_3:67393453-67393472 | Msa1304130:intron | 35.0% |
!!! | CCATTTTTTCTTGGTTTACC+GGG | - | chr8_3:67393454-67393473 | Msa1304130:intron | 35.0% |
!!! | CATTTTTTCTTGGTTTACCG+GGG | - | chr8_3:67393455-67393474 | Msa1304130:intron | 35.0% |
! | AAAAAGTGGAAACGATTTGG+TGG | + | chr8_3:67393645-67393664 | None:intergenic | 35.0% |
GACAAAAAGTGGAAACGATT+TGG | + | chr8_3:67393648-67393667 | None:intergenic | 35.0% | |
TAGAAGCGATTCAAACGAAT+GGG | + | chr8_3:67393674-67393693 | None:intergenic | 35.0% | |
!! | CACAACTTGGAATTGATTTG+GGG | - | chr8_3:67393799-67393818 | Msa1304130:CDS | 35.0% |
!! | TGCATCAATCTTTTGAAGGT+TGG | - | chr8_3:67393923-67393942 | Msa1304130:intron | 35.0% |
!! | AGTTTGCCTAGTCTTATGTA+TGG | + | chr8_3:67394128-67394147 | None:intergenic | 35.0% |
AAACCCATACAATGTTGAGA+TGG | - | chr8_3:67394151-67394170 | Msa1304130:intron | 35.0% | |
TCACCATCTCAACATTGTAT+GGG | + | chr8_3:67394157-67394176 | None:intergenic | 35.0% | |
TTCACCATCTCAACATTGTA+TGG | + | chr8_3:67394158-67394177 | None:intergenic | 35.0% | |
! | GTTTGTAGGTATTGTACAGA+AGG | - | chr8_3:67394250-67394269 | Msa1304130:intron | 35.0% |
! | TTGTAGGTATTGTACAGAAG+GGG | - | chr8_3:67394252-67394271 | Msa1304130:intron | 35.0% |
CGGCCTGTAAATATATAGAA+AGG | - | chr8_3:67394565-67394584 | Msa1304130:intron | 35.0% | |
GAGAGGTTCAATGATAAAAC+GGG | + | chr8_3:67394692-67394711 | None:intergenic | 35.0% | |
GTAAACTAGATCGAAGACAA+TGG | + | chr8_3:67394868-67394887 | None:intergenic | 35.0% | |
!! | TAAGGATTTTGGCAATGCTT+TGG | + | chr8_3:67395007-67395026 | None:intergenic | 35.0% |
! | CTTTTGCAGTCATCAACATA+TGG | - | chr8_3:67395300-67395319 | Msa1304130:intron | 35.0% |
AGTTATTCAGCTCACAGAAA+GGG | - | chr8_3:67395344-67395363 | Msa1304130:CDS | 35.0% | |
ATGAGTGATCATTTCTTGGT+AGG | + | chr8_3:67395379-67395398 | None:intergenic | 35.0% | |
!! | CTCTATTTCTAACCCCAAAA+AGG | - | chr8_3:67395410-67395429 | Msa1304130:intron | 35.0% |
AGGCTGTTTGAGAAAACTTA+TGG | - | chr8_3:67395554-67395573 | Msa1304130:CDS | 35.0% | |
! | TTGAAGTCTTGATTTTGTGC+AGG | - | chr8_3:67396263-67396282 | Msa1304130:intron | 35.0% |
!! | CTTCTAAAGTCACACATGAT+TGG | + | chr8_3:67396454-67396473 | None:intergenic | 35.0% |
! | TCTAGGAGTTGCATTTTTGA+AGG | - | chr8_3:67396634-67396653 | Msa1304130:intron | 35.0% |
TACACATGTAGCATACCAAT+AGG | + | chr8_3:67396707-67396726 | None:intergenic | 35.0% | |
!!! | AAAGCCATTTTTTCAGTCAG+TGG | - | chr8_3:67396828-67396847 | Msa1304130:intron | 35.0% |
!!! | ATTTTTTCAGTCAGTGGCAA+GGG | - | chr8_3:67396834-67396853 | Msa1304130:intron | 35.0% |
! | TAGGTGTTACCAATAGCAAA+TGG | - | chr8_3:67397125-67397144 | Msa1304130:intron | 35.0% |
CTAACACCGTGTTTATATCA+TGG | + | chr8_3:67397175-67397194 | None:intergenic | 35.0% | |
TGTTAGTGTGTTATGGTCTA+TGG | - | chr8_3:67397189-67397208 | Msa1304130:intron | 35.0% | |
!!! | GATTTTTTACCAGGAGCTAT+AGG | + | chr8_3:67397247-67397266 | None:intergenic | 35.0% |
TGTCAAATAGCCACCATTAT+TGG | + | chr8_3:67397277-67397296 | None:intergenic | 35.0% | |
ACAGGTTAAGTTTATAGGCA+TGG | - | chr8_3:67397505-67397524 | Msa1304130:intron | 35.0% | |
! | TGCATTGAAATTTTGCTTGG+GGG | + | chr8_3:67397568-67397587 | None:intergenic | 35.0% |
GTTATAGAATCAATGCGTAG+CGG | + | chr8_3:67397641-67397660 | None:intergenic | 35.0% | |
AACGATAAAAAGGCAACAAG+AGG | + | chr8_3:67397799-67397818 | None:intergenic | 35.0% | |
! | TTGTCTTTATTTCCTCTAGG+AGG | - | chr8_3:67397821-67397840 | Msa1304130:intron | 35.0% |
!!! | GTTCAGGTTTTAGATTGTAC+TGG | - | chr8_3:67397843-67397862 | Msa1304130:intron | 35.0% |
! | TTTTATGCTTTGCTCAACTG+AGG | - | chr8_3:67397966-67397985 | Msa1304130:intron | 35.0% |
TTTATGCTTTGCTCAACTGA+GGG | - | chr8_3:67397967-67397986 | Msa1304130:intron | 35.0% | |
! | GGATGTTTGAAATCAACAAG+AGG | + | chr8_3:67397994-67398013 | None:intergenic | 35.0% |
! | TTTTCATCCATAGGATTCAC+TGG | + | chr8_3:67398015-67398034 | None:intergenic | 35.0% |
! | TGACATTCGTTTTCATCCAT+AGG | + | chr8_3:67398024-67398043 | None:intergenic | 35.0% |
AACGAAGGAAATGCAAAAGA+TGG | + | chr8_3:67398098-67398117 | None:intergenic | 35.0% | |
!! | AGAAGTTCTGAAAAGAACGA+AGG | + | chr8_3:67398113-67398132 | None:intergenic | 35.0% |
! | CAGTATGAATCTGGAATTGA+AGG | + | chr8_3:67398179-67398198 | None:intergenic | 35.0% |
CAGGATAATGACAAAGTTGA+TGG | - | chr8_3:67398394-67398413 | Msa1304130:intron | 35.0% | |
AGCAATGTGATTGAAAGTCT+AGG | - | chr8_3:67398653-67398672 | Msa1304130:five_prime_UTR | 35.0% | |
GTGTTTCATCTGTGATTCCT+GGG | - | chr8_3:67392044-67392063 | Msa1304130:three_prime_UTR | 40.0% | |
CTAATTTCAGAAAACCACCC+AGG | + | chr8_3:67392064-67392083 | None:intergenic | 40.0% | |
AAAACTAACCTGGCCACATT+GGG | + | chr8_3:67392087-67392106 | None:intergenic | 40.0% | |
AAAAACTAACCTGGCCACAT+TGG | + | chr8_3:67392088-67392107 | None:intergenic | 40.0% | |
!!! | GACGTGTTTGGTTTTTGACA+CGG | - | chr8_3:67392223-67392242 | Msa1304130:three_prime_UTR | 40.0% |
GAATCACTGACACGTATACA+CGG | + | chr8_3:67392571-67392590 | None:intergenic | 40.0% | |
ATAGGTTTAGTTGCTGGGAA+AGG | - | chr8_3:67392591-67392610 | Msa1304130:intron | 40.0% | |
ACATCTATGAAGCACGGATA+CGG | + | chr8_3:67392873-67392892 | None:intergenic | 40.0% | |
AACTCCACATCTATGAAGCA+CGG | + | chr8_3:67392879-67392898 | None:intergenic | 40.0% | |
TGTCTCTGAGTGAAGAGATT+TGG | - | chr8_3:67392899-67392918 | Msa1304130:intron | 40.0% | |
TACATGCCAAGCAAACATCA+GGG | + | chr8_3:67393060-67393079 | None:intergenic | 40.0% | |
GTCAAATAACAGCTACTGTG+GGG | + | chr8_3:67393220-67393239 | None:intergenic | 40.0% | |
! | TGTGGTAGTTTGGCTTACTT+TGG | - | chr8_3:67393426-67393445 | Msa1304130:intron | 40.0% |
CCCGGTAAACCAAGAAAAAA+TGG | + | chr8_3:67393457-67393476 | None:intergenic | 40.0% | |
CTATGACCAGGGTCTTAAAT+TGG | + | chr8_3:67393483-67393502 | None:intergenic | 40.0% | |
AGAAGCGATTCAAACGAATG+GGG | + | chr8_3:67393673-67393692 | None:intergenic | 40.0% | |
GTAGAAGCGATTCAAACGAA+TGG | + | chr8_3:67393675-67393694 | None:intergenic | 40.0% | |
CAATAGACGCCAAACCAAAA+GGG | + | chr8_3:67393953-67393972 | None:intergenic | 40.0% | |
TCAATAGACGCCAAACCAAA+AGG | + | chr8_3:67393954-67393973 | None:intergenic | 40.0% | |
AATCAATTGGATGTCCGAGT+CGG | - | chr8_3:67394044-67394063 | Msa1304130:CDS | 40.0% | |
CACATCACAGTGTTTAGATC+TGG | - | chr8_3:67394202-67394221 | Msa1304130:intron | 40.0% | |
TGCTATGAAACAAAGACGTG+CGG | - | chr8_3:67394228-67394247 | Msa1304130:intron | 40.0% | |
TGAGAATTCATGAGCGTATC+CGG | + | chr8_3:67394440-67394459 | None:intergenic | 40.0% | |
GTTTATCTGCAGTCACTGAA+AGG | - | chr8_3:67394629-67394648 | Msa1304130:intron | 40.0% | |
ACAGAGCTTAAGAACTAGAG+AGG | + | chr8_3:67394709-67394728 | None:intergenic | 40.0% | |
AACTCTGGTTGTAACTTTGC+AGG | - | chr8_3:67395109-67395128 | Msa1304130:intron | 40.0% | |
GTCAGATTACCAGAAAGTCA+TGG | - | chr8_3:67395177-67395196 | Msa1304130:intron | 40.0% | |
TTACTTGAACCTCATGTACC+TGG | + | chr8_3:67395207-67395226 | None:intergenic | 40.0% | |
GATGACTGCAAAAGACATCA+TGG | + | chr8_3:67395294-67395313 | None:intergenic | 40.0% | |
!!! | GGCAAGGTTTTTGTTTTGGA+TGG | - | chr8_3:67395321-67395340 | Msa1304130:CDS | 40.0% |
GAGTTATTCAGCTCACAGAA+AGG | - | chr8_3:67395343-67395362 | Msa1304130:CDS | 40.0% | |
GCAGATGAGTGATCATTTCT+TGG | + | chr8_3:67395383-67395402 | None:intergenic | 40.0% | |
GGGTTAGAAATAGAGCAAAG+AGG | + | chr8_3:67395405-67395424 | None:intergenic | 40.0% | |
GTGTGTTTGAGCTTATTTGC+TGG | - | chr8_3:67395517-67395536 | Msa1304130:intron | 40.0% | |
!!! | TAGGTTTTGGTTATTGGTGG+AGG | - | chr8_3:67395795-67395814 | Msa1304130:intron | 40.0% |
CACAGATGAGGTTGACATTA+CGG | + | chr8_3:67395995-67396014 | None:intergenic | 40.0% | |
! | TTTTTCCCTGAAGTTGCAGT+AGG | - | chr8_3:67396297-67396316 | Msa1304130:intron | 40.0% |
! | TTTTCCCTGAAGTTGCAGTA+GGG | - | chr8_3:67396298-67396317 | Msa1304130:intron | 40.0% |
TAAACCCTACTGCAACTTCA+GGG | + | chr8_3:67396305-67396324 | None:intergenic | 40.0% | |
TTAAACCCTACTGCAACTTC+AGG | + | chr8_3:67396306-67396325 | None:intergenic | 40.0% | |
! | CATGATGACTTTTCCCACAA+TGG | - | chr8_3:67396611-67396630 | Msa1304130:intron | 40.0% |
ACTGCATCATAAGTTCCTTC+TGG | + | chr8_3:67396665-67396684 | None:intergenic | 40.0% | |
GTGGATTCATCTGATCCTAT+TGG | - | chr8_3:67396689-67396708 | Msa1304130:intron | 40.0% | |
! | CTTGCCACTGACTGAAAAAA+TGG | + | chr8_3:67396835-67396854 | None:intergenic | 40.0% |
!!! | CATTTTTTCAGTCAGTGGCA+AGG | - | chr8_3:67396833-67396852 | Msa1304130:intron | 40.0% |
AAGGCTCTGTCAATTATGCT+TGG | - | chr8_3:67396956-67396975 | Msa1304130:intron | 40.0% | |
CTACAGTTCCTACATATCCA+AGG | - | chr8_3:67396980-67396999 | Msa1304130:intron | 40.0% | |
! | GCTATTGGTAACACCTATTG+TGG | + | chr8_3:67397122-67397141 | None:intergenic | 40.0% |
GTGTTACCAATAGCAAATGG+CGG | - | chr8_3:67397128-67397147 | Msa1304130:intron | 40.0% | |
!! | CAATAGCAAATGGCGGATTA+CGG | - | chr8_3:67397135-67397154 | Msa1304130:intron | 40.0% |
! | AACACGGTGTTAGTGTGTTA+TGG | - | chr8_3:67397182-67397201 | Msa1304130:intron | 40.0% |
GGTCTATGGCAGAAAAATAG+CGG | - | chr8_3:67397203-67397222 | Msa1304130:intron | 40.0% | |
AAAATCCGCCATGCCAATAA+TGG | - | chr8_3:67397261-67397280 | Msa1304130:intron | 40.0% | |
AATAGCCACCATTATTGGCA+TGG | + | chr8_3:67397272-67397291 | None:intergenic | 40.0% | |
!!! | GTCAGACCCGTTTTAGAAAA+GGG | + | chr8_3:67397317-67397336 | None:intergenic | 40.0% |
! | TTCCCTGTTTGAGTTCTGTA+AGG | - | chr8_3:67397394-67397413 | Msa1304130:intron | 40.0% |
TGCCTTACAGAACTCAAACA+GGG | + | chr8_3:67397399-67397418 | None:intergenic | 40.0% | |
ATGCCTTACAGAACTCAAAC+AGG | + | chr8_3:67397400-67397419 | None:intergenic | 40.0% | |
! | GCATTGAAATTTTGCTTGGG+GGG | + | chr8_3:67397567-67397586 | None:intergenic | 40.0% |
! | TTATTTCCTCTAGGAGGTTC+AGG | - | chr8_3:67397827-67397846 | Msa1304130:intron | 40.0% |
CAAACATCCAGTGAATCCTA+TGG | - | chr8_3:67398005-67398024 | Msa1304130:intron | 40.0% | |
GGAAATGCAAAAGATGGTTG+AGG | + | chr8_3:67398092-67398111 | None:intergenic | 40.0% | |
AGAAAGCTGCAGTATGAATC+TGG | + | chr8_3:67398188-67398207 | None:intergenic | 40.0% | |
! | CTCGATTGGTCATCTATCAA+CGG | - | chr8_3:67398318-67398337 | Msa1304130:intron | 40.0% |
GGTGTTTCATCTGTGATTCC+TGG | - | chr8_3:67392043-67392062 | Msa1304130:three_prime_UTR | 45.0% | |
TTTCATCTGTGATTCCTGGG+TGG | - | chr8_3:67392047-67392066 | Msa1304130:three_prime_UTR | 45.0% | |
!! | AGTGTCGGTACTACTACTAC+TGG | + | chr8_3:67392193-67392212 | None:intergenic | 45.0% |
GTTGTTTACCGTGTCTGTGT+CGG | - | chr8_3:67392299-67392318 | Msa1304130:three_prime_UTR | 45.0% | |
ATGAATCACCGACACAGACA+CGG | + | chr8_3:67392310-67392329 | None:intergenic | 45.0% | |
! | TGTCTGTGTCGGTGATTCAT+TGG | - | chr8_3:67392310-67392329 | Msa1304130:three_prime_UTR | 45.0% |
! | GGTGATTCATTGGCTGGAAA+AGG | - | chr8_3:67392320-67392339 | Msa1304130:three_prime_UTR | 45.0% |
GTATCCGTGCTTCATAGATG+TGG | - | chr8_3:67392872-67392891 | Msa1304130:intron | 45.0% | |
AGAATCAGAGTGCAAAACGG+TGG | + | chr8_3:67392988-67393007 | None:intergenic | 45.0% | |
CAAGTTCCCTGATGTTTGCT+TGG | - | chr8_3:67393051-67393070 | Msa1304130:intron | 45.0% | |
GTACATGCCAAGCAAACATC+AGG | + | chr8_3:67393061-67393080 | None:intergenic | 45.0% | |
ACATCGGCACTATATCCTAG+AGG | + | chr8_3:67393295-67393314 | None:intergenic | 45.0% | |
AGGGTCTTAAATTGGTACCC+CGG | + | chr8_3:67393475-67393494 | None:intergenic | 45.0% | |
!! | AGTGGAAACGATTTGGTGGA+GGG | + | chr8_3:67393641-67393660 | None:intergenic | 45.0% |
!! | AAGTGGAAACGATTTGGTGG+AGG | + | chr8_3:67393642-67393661 | None:intergenic | 45.0% |
CGAATGGGGAAGACAAAAAG+TGG | + | chr8_3:67393659-67393678 | None:intergenic | 45.0% | |
ATCGCTTCTACCTTTCTCCA+TGG | - | chr8_3:67393684-67393703 | Msa1304130:intron | 45.0% | |
CAGCAACAGGTTTCACAACT+TGG | - | chr8_3:67393786-67393805 | Msa1304130:CDS | 45.0% | |
ATCAATTGGATGTCCGAGTC+GGG | - | chr8_3:67394045-67394064 | Msa1304130:CDS | 45.0% | |
AACAAAGACGTGCGGTTTGT+AGG | - | chr8_3:67394236-67394255 | Msa1304130:intron | 45.0% | |
TGTACAGAAGGGGATGCAAT+AGG | - | chr8_3:67394262-67394281 | Msa1304130:intron | 45.0% | |
GTACAGAAGGGGATGCAATA+GGG | - | chr8_3:67394263-67394282 | Msa1304130:intron | 45.0% | |
ATAGGGTTGCTGAGTGATAG+TGG | - | chr8_3:67394280-67394299 | Msa1304130:intron | 45.0% | |
!! | TGATAGTGGAAGGAGGTAAG+AGG | - | chr8_3:67394294-67394313 | Msa1304130:intron | 45.0% |
!! | GATAGTGGAAGGAGGTAAGA+GGG | - | chr8_3:67394295-67394314 | Msa1304130:intron | 45.0% |
AGGTAAGAGGGAGAATTGAG+TGG | - | chr8_3:67394307-67394326 | Msa1304130:intron | 45.0% | |
TAAGAGGGAGAATTGAGTGG+AGG | - | chr8_3:67394310-67394329 | Msa1304130:intron | 45.0% | |
GAAGACAATGGTCCTAGGAT+TGG | + | chr8_3:67394856-67394875 | None:intergenic | 45.0% | |
AGATCGAAGACAATGGTCCT+AGG | + | chr8_3:67394861-67394880 | None:intergenic | 45.0% | |
GCAGTCATCAACATATGGCA+AGG | - | chr8_3:67395305-67395324 | Msa1304130:CDS | 45.0% | |
TTGGTTATTGGTGGAGGTGA+TGG | - | chr8_3:67395801-67395820 | Msa1304130:intron | 45.0% | |
TGTGGTCACAACTATGGTTG+CGG | - | chr8_3:67395969-67395988 | Msa1304130:intron | 45.0% | |
ATTGTGATTCTGGTCGCGTT+AGG | + | chr8_3:67396043-67396062 | None:intergenic | 45.0% | |
! | GACTTTTCCCACAATGGTCT+AGG | - | chr8_3:67396617-67396636 | Msa1304130:intron | 45.0% |
TGCAACTCCTAGACCATTGT+GGG | + | chr8_3:67396627-67396646 | None:intergenic | 45.0% | |
ATGCAACTCCTAGACCATTG+TGG | + | chr8_3:67396628-67396647 | None:intergenic | 45.0% | |
!! | TTTTTGAAGGCAGCTCCAGA+AGG | - | chr8_3:67396647-67396666 | Msa1304130:intron | 45.0% |
ATATCCTTAAGGTCCTGCTC+AGG | - | chr8_3:67396795-67396814 | Msa1304130:intron | 45.0% | |
! | TTTTCGAAAAGCTCCTGAGC+AGG | + | chr8_3:67396811-67396830 | None:intergenic | 45.0% |
! | GCACTCAGGCTGAAAGTATA+TGG | - | chr8_3:67396881-67396900 | Msa1304130:intron | 45.0% |
!! | CGTAATCCGCCATTTGCTAT+TGG | + | chr8_3:67397137-67397156 | None:intergenic | 45.0% |
!!! | GGTCAGACCCGTTTTAGAAA+AGG | + | chr8_3:67397318-67397337 | None:intergenic | 45.0% |
TTGTCAATTGCGAATCGCAG+AGG | - | chr8_3:67397596-67397615 | Msa1304130:intron | 45.0% | |
CTAAAACCTGAACCTCCTAG+AGG | + | chr8_3:67397836-67397855 | None:intergenic | 45.0% | |
TGAGCTCAAAGTAGCTCATG+TGG | - | chr8_3:67398266-67398285 | Msa1304130:intron | 45.0% | |
CAACGGACCATGGAATAAGT+CGG | - | chr8_3:67398335-67398354 | Msa1304130:intron | 45.0% | |
!! | TTAGGCACCGACTTATTCCA+TGG | + | chr8_3:67398345-67398364 | None:intergenic | 45.0% |
! | TCTTTTATGGTCTGTGCCTG+TGG | - | chr8_3:67398565-67398584 | Msa1304130:intron | 45.0% |
! | TGGCGTGTCTTGAATGCTTT+TGG | - | chr8_3:67398585-67398604 | Msa1304130:intron | 45.0% |
!!! | TTTTTTTTTTTTTTTTGTAT+TGG | + | chr8_3:67394982-67395001 | None:intergenic | 5.0% |
!! | TCAAAAAAAAAAAAAATAAT+AGG | + | chr8_3:67397426-67397445 | None:intergenic | 5.0% |
GAAATTAGCCCAATGTGGCC+AGG | - | chr8_3:67392076-67392095 | Msa1304130:three_prime_UTR | 50.0% | |
! | TGTGTCGGTGATTCATTGGC+TGG | - | chr8_3:67392314-67392333 | Msa1304130:three_prime_UTR | 50.0% |
CCTAAGCCAATAAGTGTCCG+TGG | + | chr8_3:67392716-67392735 | None:intergenic | 50.0% | |
!! | CCACGGACACTTATTGGCTT+AGG | - | chr8_3:67392713-67392732 | Msa1304130:CDS | 50.0% |
!! | TTATTGGCTTAGGCGTGTCC+CGG | - | chr8_3:67392723-67392742 | Msa1304130:CDS | 50.0% |
ATGAAGCACGGATACGGACA+CGG | + | chr8_3:67392867-67392886 | None:intergenic | 50.0% | |
! | GGGGTACCAATTTAAGACCC+TGG | - | chr8_3:67393474-67393493 | Msa1304130:intron | 50.0% |
!! | GTGGAAACGATTTGGTGGAG+GGG | + | chr8_3:67393640-67393659 | None:intergenic | 50.0% |
!! | TGAAGGTTGGCCAACCCTTT+TGG | - | chr8_3:67393936-67393955 | Msa1304130:intron | 50.0% |
!! | GTTGGCCAACCCTTTTGGTT+TGG | - | chr8_3:67393941-67393960 | Msa1304130:intron | 50.0% |
AGACGCCAAACCAAAAGGGT+TGG | + | chr8_3:67393949-67393968 | None:intergenic | 50.0% | |
CATGTCATATAGGCCCGACT+CGG | + | chr8_3:67394061-67394080 | None:intergenic | 50.0% | |
!! | GGTTGCTGAGTGATAGTGGA+AGG | - | chr8_3:67394284-67394303 | Msa1304130:intron | 50.0% |
!! | TGCTGAGTGATAGTGGAAGG+AGG | - | chr8_3:67394287-67394306 | Msa1304130:intron | 50.0% |
CAGTGACTGCAGATAAACGC+TGG | + | chr8_3:67394627-67394646 | None:intergenic | 50.0% | |
CCTGGAAGACCATGACTTTC+TGG | + | chr8_3:67395189-67395208 | None:intergenic | 50.0% | |
CCAGAAAGTCATGGTCTTCC+AGG | - | chr8_3:67395186-67395205 | Msa1304130:intron | 50.0% | |
CATGGTCTTCCAGGTACATG+AGG | - | chr8_3:67395195-67395214 | Msa1304130:intron | 50.0% | |
TGCTGGCATAAACACTTGCG+AGG | - | chr8_3:67395534-67395553 | Msa1304130:CDS | 50.0% | |
! | GTTATTGGTGGAGGTGATGG+TGG | - | chr8_3:67395804-67395823 | Msa1304130:intron | 50.0% |
!! | AATGACGTGCTACTTCTCGC+AGG | + | chr8_3:67395833-67395852 | None:intergenic | 50.0% |
! | GTGACTCTTCGCATTGGTGA+TGG | - | chr8_3:67396336-67396355 | Msa1304130:intron | 50.0% |
TGAGTGCACATAACTCCTCC+TGG | + | chr8_3:67396868-67396887 | None:intergenic | 50.0% | |
AGGAGGAGTTATGTGCACTC+AGG | - | chr8_3:67396867-67396886 | Msa1304130:intron | 50.0% | |
!!! | GGCATGGCGGATTTTTTACC+AGG | + | chr8_3:67397256-67397275 | None:intergenic | 50.0% |
ATCCGCCATGCCAATAATGG+TGG | - | chr8_3:67397264-67397283 | Msa1304130:intron | 50.0% | |
AGCCACCATTATTGGCATGG+CGG | + | chr8_3:67397269-67397288 | None:intergenic | 50.0% | |
ACCCTCCAAGGATCCTGATA+TGG | - | chr8_3:67397335-67397354 | Msa1304130:intron | 50.0% | |
GCCATATCAGGATCCTTGGA+GGG | + | chr8_3:67397339-67397358 | None:intergenic | 50.0% | |
CTCCAAGGATCCTGATATGG+CGG | - | chr8_3:67397338-67397357 | Msa1304130:intron | 50.0% | |
TCCAAGGATCCTGATATGGC+GGG | - | chr8_3:67397339-67397358 | Msa1304130:intron | 50.0% | |
TATACAGCTCCCGCCATATC+AGG | + | chr8_3:67397351-67397370 | None:intergenic | 50.0% | |
TTGCGAATCGCAGAGGATAG+TGG | - | chr8_3:67397603-67397622 | Msa1304130:intron | 50.0% | |
ATCTTCCTCCTCGCAAACGA+CGG | + | chr8_3:67398216-67398235 | None:intergenic | 50.0% | |
TCGTTTGCGAGGAGGAAGAT+TGG | - | chr8_3:67398216-67398235 | Msa1304130:intron | 50.0% | |
GGTCATCTATCAACGGACCA+TGG | - | chr8_3:67398325-67398344 | Msa1304130:intron | 50.0% | |
AAGCATTCAAGACACGCCAC+AGG | + | chr8_3:67398584-67398603 | None:intergenic | 50.0% | |
TCAGACACGTCACGACACAC+CGG | + | chr8_3:67392745-67392764 | None:intergenic | 55.0% | |
TAACAGCTACTGTGGGGCTG+TGG | + | chr8_3:67393214-67393233 | None:intergenic | 55.0% | |
CCAATGCGAAGAGTCACACG+TGG | + | chr8_3:67396333-67396352 | None:intergenic | 55.0% | |
CCACGTGTGACTCTTCGCAT+TGG | - | chr8_3:67396330-67396349 | Msa1304130:intron | 55.0% | |
AGCTCCTGAGCAGGACCTTA+AGG | + | chr8_3:67396802-67396821 | None:intergenic | 55.0% | |
GGTTTGCGACCTATAGCTCC+TGG | - | chr8_3:67397235-67397254 | Msa1304130:intron | 55.0% | |
AAAACGGGTCTGACCCTCCA+AGG | - | chr8_3:67397323-67397342 | Msa1304130:intron | 55.0% | |
CGCCATATCAGGATCCTTGG+AGG | + | chr8_3:67397340-67397359 | None:intergenic | 55.0% | |
TCCCGCCATATCAGGATCCT+TGG | + | chr8_3:67397343-67397362 | None:intergenic | 55.0% | |
TCTGTTTGCCGTCGTTTGCG+AGG | - | chr8_3:67398205-67398224 | Msa1304130:intron | 55.0% | |
CAGACACGTCACGACACACC+GGG | + | chr8_3:67392744-67392763 | None:intergenic | 60.0% | |
GTCTGTGTGCGTGTCGTGTC+TGG | - | chr8_3:67392838-67392857 | Msa1304130:intron | 60.0% | |
GTTTGCCGTCGTTTGCGAGG+AGG | - | chr8_3:67398208-67398227 | Msa1304130:intron | 60.0% | |
GTGGCAAGGGCTCTTCGTCC+AGG | - | chr8_3:67396847-67396866 | Msa1304130:intron | 65.0% | |
GCAAGGGCTCTTCGTCCAGG+AGG | - | chr8_3:67396850-67396869 | Msa1304130:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 67392034 | 67398699 | 67392034 | ID=Msa1304130;Name=Msa1304130 |
chr8_3 | mRNA | 67392034 | 67398699 | 67392034 | ID=Msa1304130-mRNA-1;Parent=Msa1304130;Name=Msa1304130-mRNA-1;_AED=0.18;_eAED=0.18;_QI=54|0.87|0.77|1|0.87|1|9|445|269 |
chr8_3 | exon | 67392034 | 67392544 | 67392034 | ID=Msa1304130-mRNA-1:exon:20719;Parent=Msa1304130-mRNA-1 |
chr8_3 | exon | 67392653 | 67392779 | 67392653 | ID=Msa1304130-mRNA-1:exon:20718;Parent=Msa1304130-mRNA-1 |
chr8_3 | exon | 67393732 | 67393927 | 67393732 | ID=Msa1304130-mRNA-1:exon:20717;Parent=Msa1304130-mRNA-1 |
chr8_3 | exon | 67394023 | 67394077 | 67394023 | ID=Msa1304130-mRNA-1:exon:20716;Parent=Msa1304130-mRNA-1 |
chr8_3 | exon | 67394398 | 67394448 | 67394398 | ID=Msa1304130-mRNA-1:exon:20715;Parent=Msa1304130-mRNA-1 |
chr8_3 | exon | 67394831 | 67394935 | 67394831 | ID=Msa1304130-mRNA-1:exon:20714;Parent=Msa1304130-mRNA-1 |
chr8_3 | exon | 67395302 | 67395424 | 67395302 | ID=Msa1304130-mRNA-1:exon:20713;Parent=Msa1304130-mRNA-1 |
chr8_3 | exon | 67395526 | 67395602 | 67395526 | ID=Msa1304130-mRNA-1:exon:20712;Parent=Msa1304130-mRNA-1 |
chr8_3 | exon | 67398636 | 67398699 | 67398636 | ID=Msa1304130-mRNA-1:exon:20711;Parent=Msa1304130-mRNA-1 |
chr8_3 | five_prime_UTR | 67398646 | 67398699 | 67398646 | ID=Msa1304130-mRNA-1:five_prime_utr;Parent=Msa1304130-mRNA-1 |
chr8_3 | CDS | 67398636 | 67398645 | 67398636 | ID=Msa1304130-mRNA-1:cds;Parent=Msa1304130-mRNA-1 |
chr8_3 | CDS | 67395526 | 67395602 | 67395526 | ID=Msa1304130-mRNA-1:cds;Parent=Msa1304130-mRNA-1 |
chr8_3 | CDS | 67395302 | 67395424 | 67395302 | ID=Msa1304130-mRNA-1:cds;Parent=Msa1304130-mRNA-1 |
chr8_3 | CDS | 67394831 | 67394935 | 67394831 | ID=Msa1304130-mRNA-1:cds;Parent=Msa1304130-mRNA-1 |
chr8_3 | CDS | 67394398 | 67394448 | 67394398 | ID=Msa1304130-mRNA-1:cds;Parent=Msa1304130-mRNA-1 |
chr8_3 | CDS | 67394023 | 67394077 | 67394023 | ID=Msa1304130-mRNA-1:cds;Parent=Msa1304130-mRNA-1 |
chr8_3 | CDS | 67393732 | 67393927 | 67393732 | ID=Msa1304130-mRNA-1:cds;Parent=Msa1304130-mRNA-1 |
chr8_3 | CDS | 67392653 | 67392779 | 67392653 | ID=Msa1304130-mRNA-1:cds;Parent=Msa1304130-mRNA-1 |
chr8_3 | CDS | 67392479 | 67392544 | 67392479 | ID=Msa1304130-mRNA-1:cds;Parent=Msa1304130-mRNA-1 |
chr8_3 | three_prime_UTR | 67392034 | 67392478 | 67392034 | ID=Msa1304130-mRNA-1:three_prime_utr;Parent=Msa1304130-mRNA-1 |
Gene Sequence |
Protein sequence |