AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1304130


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1304130 MtrunA17_Chr8g0365071 93.262 282 6 1 1 269 61 342 0.0 543
Msa1304130 MtrunA17_Chr5g0413701 84.752 282 30 1 1 269 62 343 0.0 502
Msa1304130 MtrunA17_Chr3g0126551 67.626 278 76 2 1 264 76 353 5.49e-133 380
Msa1304130 MtrunA17_Chr3g0117881 59.507 284 98 2 1 267 51 334 5.90e-131 374
Msa1304130 MtrunA17_Chr1g0158851 65.108 278 82 3 1 264 81 357 1.18e-125 362
Msa1304130 MtrunA17_Chr5g0394371 34.802 227 128 8 11 220 42 265 5.47e-35 128
Msa1304130 MtrunA17_Chr1g0150851 30.603 232 142 6 8 222 56 285 5.91e-33 123
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1304130 AT1G23820.1 80.851 282 40 2 1 269 54 334 9.77e-172 478
Msa1304130 AT1G70310.1 79.505 283 44 2 1 269 58 340 4.62e-167 466
Msa1304130 AT1G23820.2 83.028 218 24 1 1 205 98 315 5.61e-134 382
Msa1304130 AT5G53120.1 66.786 280 78 3 1 266 77 355 2.19e-132 379
Msa1304130 AT5G53120.4 66.786 280 78 3 1 266 77 355 2.19e-132 379
Msa1304130 AT5G53120.2 66.786 280 78 3 1 266 77 355 2.19e-132 379
Msa1304130 AT5G53120.5 66.786 280 78 3 1 266 77 355 2.19e-132 379
Msa1304130 AT5G53120.3 66.786 280 78 3 1 266 77 355 2.19e-132 379
Msa1304130 AT5G53120.7 66.786 280 78 3 1 266 94 372 5.17e-132 379
Msa1304130 AT5G53120.6 58.306 307 86 5 1 266 77 382 4.55e-128 369
Msa1304130 AT5G19530.1 30.451 266 162 8 8 256 47 306 2.24e-35 129
Msa1304130 AT5G19530.2 30.739 257 155 8 8 247 40 290 2.50e-35 129

Find 60 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGGAAGACCATGACTTTC+TGG 0.202805 8_3:+67395525 None:intergenic
GAGAAGTAACTGTTTATTTC+AGG 0.232605 8_3:-67392336 Msa1304130:three_prime_UTR
GTATCTTAGGTTCTTTGATT+TGG 0.272891 8_3:-67392104 Msa1304130:three_prime_UTR
CTCTATTTCTAACCCCAAAA+AGG 0.307016 8_3:-67395301 Msa1304130:intron
GGTGTTTCATCTGTGATTCC+TGG 0.309804 8_3:-67398668 Msa1304130:five_prime_UTR
CCAGAAAGTCATGGTCTTCC+AGG 0.315838 8_3:-67395525 Msa1304130:intron
TGGCGTGTCTTGAATGCTTT+TGG 0.323325 8_3:-67392126 Msa1304130:three_prime_UTR
CAGGATAATGACAAAGTTGA+TGG 0.324169 8_3:-67392317 Msa1304130:three_prime_UTR
TTGGTTATTGGTGGAGGTGA+TGG 0.328542 8_3:-67394910 Msa1304130:CDS
TTTGAAAATCTGACGACAAT+TGG 0.351640 8_3:+67393776 None:intergenic
ACTGCATCATAAGTTCCTTC+TGG 0.359338 8_3:+67394049 None:intergenic
GCAGATGAGTGATCATTTCT+TGG 0.367323 8_3:+67395331 None:intergenic
CATTTGTGAAATTGACAATA+TGG 0.376368 8_3:-67394839 Msa1304130:CDS
TTAAACCCTACTGCAACTTC+AGG 0.398829 8_3:+67394408 None:intergenic
GCACTCAGGCTGAAAGTATA+TGG 0.405219 8_3:-67393830 Msa1304130:CDS
AACTTATGATGCAGTTATAG+TGG 0.422946 8_3:-67394041 Msa1304130:CDS
TACTTCTCGACATCAAATTT+AGG 0.427367 8_3:+67392351 None:intergenic
GTTATTGGTGGAGGTGATGG+TGG 0.427899 8_3:-67394907 Msa1304130:CDS
GTGGATTCATCTGATCCTAT+TGG 0.434928 8_3:-67394022 Msa1304130:intron
AAAACTAACCTGGCCACATT+GGG 0.439033 8_3:+67398627 None:intergenic
CGAGTAAAAGATATGAATGA+TGG 0.469620 8_3:+67392412 None:intergenic
TGAAAGTATATGGCTTCATA+TGG 0.483697 8_3:-67393820 Msa1304130:CDS
AAGGCTCTGTCAATTATGCT+TGG 0.485127 8_3:-67393755 Msa1304130:CDS
AAAACATACCTTGGATATGT+AGG 0.492840 8_3:+67393723 None:intergenic
GAAATTAGCCCAATGTGGCC+AGG 0.496157 8_3:-67398635 Msa1304130:intron
GTGTTTCATCTGTGATTCCT+GGG 0.503605 8_3:-67398667 Msa1304130:five_prime_UTR
TCGTTTGCGAGGAGGAAGAT+TGG 0.509808 8_3:-67392495 Msa1304130:CDS
GTGGCAAGGGCTCTTCGTCC+AGG 0.512123 8_3:-67393864 Msa1304130:CDS
TATGTTGAAACATGATTAGC+TGG 0.516037 8_3:-67392255 Msa1304130:three_prime_UTR
TGAGTGCACATAACTCCTCC+TGG 0.525919 8_3:+67393846 None:intergenic
CAAACATCCAGTGAATCCTA+TGG 0.529311 8_3:-67392706 Msa1304130:CDS
TAAACCCTACTGCAACTTCA+GGG 0.530870 8_3:+67394409 None:intergenic
GCTTCATATGGATATAATTG+AGG 0.531349 8_3:-67393808 Msa1304130:CDS
TTTATGCTTTGCTCAACTGA+GGG 0.534590 8_3:-67392744 Msa1304130:CDS
ATATCCTTAAGGTCCTGCTC+AGG 0.540360 8_3:-67393916 Msa1304130:intron
ATGAGTGATCATTTCTTGGT+AGG 0.543438 8_3:+67395335 None:intergenic
GAGTTATTCAGCTCACAGAA+AGG 0.548553 8_3:-67395368 Msa1304130:CDS
TTAGGCACCGACTTATTCCA+TGG 0.563264 8_3:+67392369 None:intergenic
CTCGATTGGTCATCTATCAA+CGG 0.564251 8_3:-67392393 Msa1304130:three_prime_UTR
GCAGTCATCAACATATGGCA+AGG 0.564879 8_3:-67395406 Msa1304130:intron
AGTTATTCAGCTCACAGAAA+GGG 0.568813 8_3:-67395367 Msa1304130:CDS
TCTGTTTGCCGTCGTTTGCG+AGG 0.581679 8_3:-67392506 Msa1304130:CDS
TCAGAGTTGTAAAATTTGAG+TGG 0.611670 8_3:+67392654 None:intergenic
AGCAATGTGATTGAAAGTCT+AGG 0.613591 8_3:-67392058 Msa1304130:three_prime_UTR
AGGAGGAGTTATGTGCACTC+AGG 0.621343 8_3:-67393844 Msa1304130:CDS
AAGCATTCAAGACACGCCAC+AGG 0.623562 8_3:+67392130 None:intergenic
GTTTGCCGTCGTTTGCGAGG+AGG 0.626127 8_3:-67392503 Msa1304130:CDS
TGAGCTCAAAGTAGCTCATG+TGG 0.628171 8_3:-67392445 Msa1304130:three_prime_UTR
CAACGGACCATGGAATAAGT+CGG 0.630265 8_3:-67392376 Msa1304130:three_prime_UTR
GGGTTAGAAATAGAGCAAAG+AGG 0.632220 8_3:+67395309 None:intergenic
CTACAGTTCCTACATATCCA+AGG 0.636790 8_3:-67393731 Msa1304130:intron
GGTCATCTATCAACGGACCA+TGG 0.641202 8_3:-67392386 Msa1304130:three_prime_UTR
GTCAGATTACCAGAAAGTCA+TGG 0.643976 8_3:-67395534 Msa1304130:CDS
ATCTTCCTCCTCGCAAACGA+CGG 0.645194 8_3:+67392498 None:intergenic
AATGACGTGCTACTTCTCGC+AGG 0.646893 8_3:+67394881 None:intergenic
TTTCATCTGTGATTCCTGGG+TGG 0.656590 8_3:-67398664 Msa1304130:five_prime_UTR
GCAAGGGCTCTTCGTCCAGG+AGG 0.657812 8_3:-67393861 Msa1304130:CDS
GGATGTTTGAAATCAACAAG+AGG 0.663795 8_3:+67392720 None:intergenic
TTTCTGAAATTAGCCCAATG+TGG 0.672641 8_3:-67398640 Msa1304130:exon
CTAATTTCAGAAAACCACCC+AGG 0.684797 8_3:+67398650 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATATATATATATATAT+AGG + chr8_3:67393904-67393923 None:intergenic 0.0%
!! TTGATAGAATATATATTTAA+CGG - chr8_3:67393995-67394014 Msa1304130:intron 10.0%
!!! TATTTTTGACAAAATAAATT+CGG - chr8_3:67395047-67395066 Msa1304130:intron 10.0%
!! TACATCAAATAAAAAAAAAT+TGG + chr8_3:67396135-67396154 None:intergenic 10.0%
!!! AATTTTTTTTTATTTGATGT+AGG - chr8_3:67396134-67396153 Msa1304130:intron 10.0%
!! AAATTAAACACAAATATTTA+AGG + chr8_3:67396387-67396406 None:intergenic 10.0%
!! CATTCATTAGATATAATAAA+CGG - chr8_3:67393577-67393596 Msa1304130:intron 15.0%
!! ATAATTCAAATTGAATCAAT+TGG - chr8_3:67394031-67394050 Msa1304130:CDS 15.0%
!! CATCCATTAAATATAATAAA+CGG + chr8_3:67394375-67394394 None:intergenic 15.0%
!! TTGTAAAAAACAAAGTATAT+TGG - chr8_3:67395480-67395499 Msa1304130:intron 15.0%
!! TGTAAAAAACAAAGTATATT+GGG - chr8_3:67395481-67395500 Msa1304130:intron 15.0%
!!! CAAAATAATAAAATTTTGTG+TGG + chr8_3:67395915-67395934 None:intergenic 15.0%
!!! AATAACATGATTTTAAATTG+TGG - chr8_3:67395951-67395970 Msa1304130:intron 15.0%
!!! ATATTTTTATATTGTGATTC+TGG + chr8_3:67396053-67396072 None:intergenic 15.0%
!! AAAAAAAGTTTATATCACTT+AGG + chr8_3:67396749-67396768 None:intergenic 15.0%
!!! TCCTATGTTTTTTTTAATAA+TGG - chr8_3:67397453-67397472 Msa1304130:intron 15.0%
!!! TTTCATTTTTTTGTTATAGT+GGG - chr8_3:67397935-67397954 Msa1304130:intron 15.0%
!!! TAATTTTTATCTTCATCATT+TGG - chr8_3:67398132-67398151 Msa1304130:intron 15.0%
!! AGAAAAAAAAAAAACTAACC+TGG + chr8_3:67392097-67392116 None:intergenic 20.0%
!! ATTATTGTGTTTAAACTTGT+TGG - chr8_3:67392345-67392364 Msa1304130:three_prime_UTR 20.0%
!! AAGTAATTGAATGTAATAAC+AGG + chr8_3:67392502-67392521 None:intergenic 20.0%
!! CTTATTGTGTTTAAACTTAT+TGG - chr8_3:67392616-67392635 Msa1304130:intron 20.0%
!!! TGATTTTCTCAAATTATTAG+CGG - chr8_3:67392806-67392825 Msa1304130:intron 20.0%
!!! TAAGATTTAATTTACAACCA+TGG + chr8_3:67393704-67393723 None:intergenic 20.0%
!! GAAAACAAGATTATAATAGA+AGG - chr8_3:67393729-67393748 Msa1304130:intron 20.0%
!! AATAAAAGAAAAAGTAGGAA+AGG + chr8_3:67393763-67393782 None:intergenic 20.0%
!! TGATCAATAAAAGAAAAAGT+AGG + chr8_3:67393768-67393787 None:intergenic 20.0%
!! AAGCCGTTTATTATATTTAA+TGG - chr8_3:67394369-67394388 Msa1304130:intron 20.0%
!!! TCATGATTATTTTGCATAAA+TGG - chr8_3:67394541-67394560 Msa1304130:intron 20.0%
!!! CATGATTATTTTGCATAAAT+GGG - chr8_3:67394542-67394561 Msa1304130:intron 20.0%
!!! CTCTGTATATATTTTTTACT+GGG - chr8_3:67394723-67394742 Msa1304130:intron 20.0%
!!! TCTTCAGATTATCTTTTTAT+CGG - chr8_3:67394924-67394943 Msa1304130:intron 20.0%
!!! ATAGAAAAGATTTTGTTTCA+AGG - chr8_3:67395151-67395170 Msa1304130:intron 20.0%
!!! TAATTTTCTGTTTTAGGTTT+TGG - chr8_3:67395782-67395801 Msa1304130:intron 20.0%
!!! AAAATCATGTTATTTAGCTT+AGG + chr8_3:67395945-67395964 None:intergenic 20.0%
!!! TTATTCTGTTCTTTTTTAGT+CGG - chr8_3:67396185-67396204 Msa1304130:intron 20.0%
!! CGTTATATTTAATATCCTTA+AGG - chr8_3:67396784-67396803 Msa1304130:intron 20.0%
!! AAAATTCCATGATATAAACA+CGG - chr8_3:67397166-67397185 Msa1304130:intron 20.0%
!! GCCATTATTAAAAAAAACAT+AGG + chr8_3:67397457-67397476 None:intergenic 20.0%
!!! GTTTTTTTTAATAATGGCAA+AGG - chr8_3:67397459-67397478 Msa1304130:intron 20.0%
!! TCCTATGTATTAATTATTAC+AGG - chr8_3:67397487-67397506 Msa1304130:intron 20.0%
!! ACCTGTAATAATTAATACAT+AGG + chr8_3:67397491-67397510 None:intergenic 20.0%
!! TTATTACAGGTTAAGTTTAT+AGG - chr8_3:67397500-67397519 Msa1304130:intron 20.0%
!! AAAGACAAAAAACGATAAAA+AGG + chr8_3:67397809-67397828 None:intergenic 20.0%
!! AAATGAAAGAAATATTACGA+TGG + chr8_3:67397923-67397942 None:intergenic 20.0%
!!! CTTTCATTTTTTTGTTATAG+TGG - chr8_3:67397934-67397953 Msa1304130:intron 20.0%
! TTTATAACCAACATGCAAAA+GGG + chr8_3:67392133-67392152 None:intergenic 25.0%
!! TTTTATAACCAACATGCAAA+AGG + chr8_3:67392134-67392153 None:intergenic 25.0%
! AACTAACTAAACACACAAAA+AGG + chr8_3:67392163-67392182 None:intergenic 25.0%
!!! TTTGTGTTTTTGTTTGGTTA+TGG - chr8_3:67392368-67392387 Msa1304130:three_prime_UTR 25.0%
!!! TATTGGTTTGTGTTTTTGTA+TGG - chr8_3:67392633-67392652 Msa1304130:intron 25.0%
!!! TTTGTGTTTTTGTATGGTTA+TGG - chr8_3:67392639-67392658 Msa1304130:intron 25.0%
!!! ATGGAAAACTTAACTTGTAT+TGG - chr8_3:67392658-67392677 Msa1304130:CDS 25.0%
!!! ACTTAACTTGTATTGGTTTT+TGG - chr8_3:67392665-67392684 Msa1304130:CDS 25.0%
!!! CTTAACTTGTATTGGTTTTT+GGG - chr8_3:67392666-67392685 Msa1304130:CDS 25.0%
! TTCAGTGTAACTATAAATGT+CGG + chr8_3:67392781-67392800 None:intergenic 25.0%
! ATTTCCAGTGTTATAATTTG+CGG - chr8_3:67393151-67393170 Msa1304130:intron 25.0%
!! CAATTTGTTTAAATTCCTCT+AGG - chr8_3:67393277-67393296 Msa1304130:intron 25.0%
! TTGTCAAATAGTAACTACAT+CGG + chr8_3:67393311-67393330 None:intergenic 25.0%
! TAGTTACTATTTGACAACAT+TGG - chr8_3:67393314-67393333 Msa1304130:intron 25.0%
! AAATTTCATATCTATGACCA+GGG + chr8_3:67393494-67393513 None:intergenic 25.0%
! TAAATTTCATATCTATGACC+AGG + chr8_3:67393495-67393514 None:intergenic 25.0%
! TGGTCATAGATATGAAATTT+AGG - chr8_3:67393494-67393513 Msa1304130:intron 25.0%
! ACAAGATTATAATAGAAGGA+AGG - chr8_3:67393733-67393752 Msa1304130:CDS 25.0%
!! TATTTGCATCAATCTTTTGA+AGG - chr8_3:67393919-67393938 Msa1304130:intron 25.0%
!! TATTTAACGGATCTATCTTT+CGG - chr8_3:67394008-67394027 Msa1304130:intron 25.0%
! ATGTATGGAATATATGACAA+AGG + chr8_3:67394113-67394132 None:intergenic 25.0%
! TATATTCCATACATAAGACT+AGG - chr8_3:67394119-67394138 Msa1304130:intron 25.0%
! TATCAATGATCTTAACTGTT+TGG - chr8_3:67394494-67394513 Msa1304130:intron 25.0%
! ATCAATGATCTTAACTGTTT+GGG - chr8_3:67394495-67394514 Msa1304130:intron 25.0%
! ATGCCTTTCTATATATTTAC+AGG + chr8_3:67394571-67394590 None:intergenic 25.0%
!!! GCTCTGTATATATTTTTTAC+TGG - chr8_3:67394722-67394741 Msa1304130:intron 25.0%
! CTAACAAAAGAATATTTGCT+TGG + chr8_3:67394810-67394829 None:intergenic 25.0%
!!! TTTTTTGTTATACCAATCCT+AGG - chr8_3:67394841-67394860 Msa1304130:CDS 25.0%
!!! GCAAATTTTTCTAAGGATTT+TGG + chr8_3:67395018-67395037 None:intergenic 25.0%
!! GACAAAATAAATTCGGTTTT+TGG - chr8_3:67395054-67395073 Msa1304130:intron 25.0%
! AAAACTCATGAATTAAACTC+TGG - chr8_3:67395094-67395113 Msa1304130:intron 25.0%
!! CAAAATCTTTTCTATCTTCA+AGG + chr8_3:67395146-67395165 None:intergenic 25.0%
!! AAGTATAAATGACCTTTTTG+GGG + chr8_3:67395425-67395444 None:intergenic 25.0%
!! GAAGTATAAATGACCTTTTT+GGG + chr8_3:67395426-67395445 None:intergenic 25.0%
!!! AGAAGTATAAATGACCTTTT+TGG + chr8_3:67395427-67395446 None:intergenic 25.0%
!! TCACTGTAATTTTCTGTTTT+AGG - chr8_3:67395776-67395795 Msa1304130:intron 25.0%
! CATTTGTGAAATTGACAATA+TGG - chr8_3:67395872-67395891 Msa1304130:intron 25.0%
!! TATTGACTAAATTATCTTGC+TGG - chr8_3:67396070-67396089 Msa1304130:intron 25.0%
! TTAAGGAAACATATTAGTGT+AGG + chr8_3:67396370-67396389 None:intergenic 25.0%
! GTAAAAAATCTTTACACTGA+CGG - chr8_3:67396532-67396551 Msa1304130:intron 25.0%
! ATAAATATGACTTCTCAATG+AGG + chr8_3:67396589-67396608 None:intergenic 25.0%
! TAGATTACAAAAACATACCT+TGG + chr8_3:67397000-67397019 None:intergenic 25.0%
!! GTGTTTATATCATGGAATTT+TGG + chr8_3:67397167-67397186 None:intergenic 25.0%
!!! TAACATACCCTTTTCTAAAA+CGG - chr8_3:67397307-67397326 Msa1304130:intron 25.0%
! AATTTCATATGACCAATTTG+CGG + chr8_3:67397539-67397558 None:intergenic 25.0%
!! TTTGCATTGAAATTTTGCTT+GGG + chr8_3:67397570-67397589 None:intergenic 25.0%
!! ATTTGCATTGAAATTTTGCT+TGG + chr8_3:67397571-67397590 None:intergenic 25.0%
! AGCAAAATTTCAATGCAAAT+CGG - chr8_3:67397571-67397590 Msa1304130:intron 25.0%
! TTGTATTAAATAGCGTATCT+TGG - chr8_3:67397684-67397703 Msa1304130:intron 25.0%
!!! TTTTTGTCTTTATTTCCTCT+AGG - chr8_3:67397818-67397837 Msa1304130:intron 25.0%
!! ATTCATATCTTTTACTCGAT+TGG - chr8_3:67398304-67398323 Msa1304130:intron 25.0%
!!! TGTTGGTTTGTGTTTTTGTT+TGG - chr8_3:67392362-67392381 Msa1304130:three_prime_UTR 30.0%
!! TTATGTTTAGTTCTGTGTAG+CGG - chr8_3:67392414-67392433 Msa1304130:three_prime_UTR 30.0%
TTGAATGTAATAACAGGTGT+TGG + chr8_3:67392496-67392515 None:intergenic 30.0%
!!! TTTTTGGGTTCAACTTAATG+TGG - chr8_3:67392681-67392700 Msa1304130:CDS 30.0%
TTGATTCAATACGTGTATGT+AGG + chr8_3:67393083-67393102 None:intergenic 30.0%
TAATCACACAGACATATAAC+AGG + chr8_3:67393362-67393381 None:intergenic 30.0%
TTATATGTCTGTGTGATTAG+TGG - chr8_3:67393363-67393382 Msa1304130:intron 30.0%
TTCTTTGACATATGAACATG+TGG - chr8_3:67393408-67393427 Msa1304130:intron 30.0%
!!! TTGGTTAAGCCATTTTTTCT+TGG - chr8_3:67393445-67393464 Msa1304130:intron 30.0%
TAATTTACAACCATGGAGAA+AGG + chr8_3:67393697-67393716 None:intergenic 30.0%
! TTCTTTTATTGATCAGCAAC+AGG - chr8_3:67393773-67393792 Msa1304130:CDS 30.0%
TTCACAACTTGGAATTGATT+TGG - chr8_3:67393797-67393816 Msa1304130:CDS 30.0%
! TCACAACTTGGAATTGATTT+GGG - chr8_3:67393798-67393817 Msa1304130:CDS 30.0%
!! ATTTGGGGATTTGATTTTGT+TGG - chr8_3:67393814-67393833 Msa1304130:CDS 30.0%
TATTGATCGTCATGTCATAT+AGG + chr8_3:67394071-67394090 None:intergenic 30.0%
TATGGAATATATGACAAAGG+TGG + chr8_3:67394110-67394129 None:intergenic 30.0%
AATGTTGAGATGGTGAAATA+CGG - chr8_3:67394161-67394180 Msa1304130:intron 30.0%
! TGAAATACGGATTTGAAACA+AGG - chr8_3:67394174-67394193 Msa1304130:intron 30.0%
! GAAATACGGATTTGAAACAA+GGG - chr8_3:67394175-67394194 Msa1304130:intron 30.0%
! TTTGTAGGTATTGTACAGAA+GGG - chr8_3:67394251-67394270 Msa1304130:intron 30.0%
CAATAAATAAGAGTTCTCAC+CGG - chr8_3:67394418-67394437 Msa1304130:CDS 30.0%
!! GATTATTTTGCATAAATGGG+CGG - chr8_3:67394545-67394564 Msa1304130:intron 30.0%
AATACATAGCAATCTTTGCA+AGG + chr8_3:67394669-67394688 None:intergenic 30.0%
AGAGAGGTTCAATGATAAAA+CGG + chr8_3:67394693-67394712 None:intergenic 30.0%
ACATAGTTGAGTTCATCTTA+TGG - chr8_3:67394953-67394972 Msa1304130:intron 30.0%
! ACTGTGTGCAAATTTTTCTA+AGG + chr8_3:67395025-67395044 None:intergenic 30.0%
!! ATATGGCAAGGTTTTTGTTT+TGG - chr8_3:67395317-67395336 Msa1304130:CDS 30.0%
! ATTGAGTTGTTTATCCAAAC+TGG - chr8_3:67395671-67395690 Msa1304130:intron 30.0%
ATATAGACATAAGTCCAGTT+TGG + chr8_3:67395688-67395707 None:intergenic 30.0%
!!! CTGTTTTAGGTTTTGGTTAT+TGG - chr8_3:67395789-67395808 Msa1304130:intron 30.0%
!!! TTTTAGGTTTTGGTTATTGG+TGG - chr8_3:67395792-67395811 Msa1304130:intron 30.0%
TTAAATTGTGGTCACAACTA+TGG - chr8_3:67395963-67395982 Msa1304130:intron 30.0%
CATAAAATTGAACACAGATG+AGG + chr8_3:67396007-67396026 None:intergenic 30.0%
! TGATGTAGGATTTTCTACTT+AGG - chr8_3:67396148-67396167 Msa1304130:intron 30.0%
! GATGTAGGATTTTCTACTTA+GGG - chr8_3:67396149-67396168 Msa1304130:intron 30.0%
! GATTTTCTACTTAGGGAAAT+TGG - chr8_3:67396156-67396175 Msa1304130:intron 30.0%
AAAGTATAGTCTCTATTGCT+CGG - chr8_3:67396213-67396232 Msa1304130:intron 30.0%
AACTTCAGGGAAAAATTGTT+TGG + chr8_3:67396292-67396311 None:intergenic 30.0%
AACTTATGATGCAGTTATAG+TGG - chr8_3:67396670-67396689 Msa1304130:intron 30.0%
! TGAAAGTATATGGCTTCATA+TGG - chr8_3:67396891-67396910 Msa1304130:intron 30.0%
GCTTCATATGGATATAATTG+AGG - chr8_3:67396903-67396922 Msa1304130:intron 30.0%
TTTGAAAATCTGACGACAAT+TGG + chr8_3:67396938-67396957 None:intergenic 30.0%
! AATTGTCGTCAGATTTTCAA+AGG - chr8_3:67396937-67396956 Msa1304130:intron 30.0%
AAAACATACCTTGGATATGT+AGG + chr8_3:67396991-67397010 None:intergenic 30.0%
CAACATTTCTCTTCTCAAAT+AGG + chr8_3:67397027-67397046 None:intergenic 30.0%
CTATTTGAGAAGAGAAATGT+TGG - chr8_3:67397025-67397044 Msa1304130:intron 30.0%
AAATCACATGTTCAAGTCAT+AGG - chr8_3:67397054-67397073 Msa1304130:intron 30.0%
CATTTACAAACATTTGCAAG+AGG + chr8_3:67397085-67397104 None:intergenic 30.0%
AAGATAAGATTGTCCACAAT+AGG - chr8_3:67397106-67397125 Msa1304130:intron 30.0%
!! AGAAAAATAGCGGATACAAT+AGG - chr8_3:67397213-67397232 Msa1304130:intron 30.0%
!! GAAAAATAGCGGATACAATA+GGG - chr8_3:67397214-67397233 Msa1304130:intron 30.0%
!!! AACATACCCTTTTCTAAAAC+GGG - chr8_3:67397308-67397327 Msa1304130:intron 30.0%
CAAACAGGGAAATAGAAAAA+GGG + chr8_3:67397385-67397404 None:intergenic 30.0%
TCAAACAGGGAAATAGAAAA+AGG + chr8_3:67397386-67397405 None:intergenic 30.0%
ATGGTAATTATACCGCAAAT+TGG - chr8_3:67397524-67397543 Msa1304130:intron 30.0%
! TTGCATTGAAATTTTGCTTG+GGG + chr8_3:67397569-67397588 None:intergenic 30.0%
GTATTGCATATTGGATTACT+GGG + chr8_3:67397732-67397751 None:intergenic 30.0%
AGTATTGCATATTGGATTAC+TGG + chr8_3:67397733-67397752 None:intergenic 30.0%
! AAAGCACTAGTATTGCATAT+TGG + chr8_3:67397741-67397760 None:intergenic 30.0%
! ATACTACTCTTTTTGTGTTG+AGG - chr8_3:67397876-67397895 Msa1304130:intron 30.0%
!! TTTTGTTATAGTGGGATGAT+TGG - chr8_3:67397943-67397962 Msa1304130:intron 30.0%
TCAGAGTTGTAAAATTTGAG+TGG + chr8_3:67398060-67398079 None:intergenic 30.0%
! ACTCAAATTTTACAACTCTG+AGG - chr8_3:67398059-67398078 Msa1304130:intron 30.0%
! AGAATCTTCTCAGTTTTCTT+TGG + chr8_3:67398244-67398263 None:intergenic 30.0%
CGAGTAAAAGATATGAATGA+TGG + chr8_3:67398302-67398321 None:intergenic 30.0%
TACTTCTCGACATCAAATTT+AGG + chr8_3:67398363-67398382 None:intergenic 30.0%
GAGAAGTAACTGTTTATTTC+AGG - chr8_3:67398375-67398394 Msa1304130:intron 30.0%
TATGTTGAAACATGATTAGC+TGG - chr8_3:67398456-67398475 Msa1304130:intron 30.0%
! GATTGAGATGCATTCTTTTA+TGG - chr8_3:67398552-67398571 Msa1304130:intron 30.0%
! TTGAATGCTTTTGGTATCTT+AGG - chr8_3:67398594-67398613 Msa1304130:intron 30.0%
GTATCTTAGGTTCTTTGATT+TGG - chr8_3:67398607-67398626 Msa1304130:intron 30.0%
!! TTTCTGAAATTAGCCCAATG+TGG - chr8_3:67392071-67392090 Msa1304130:three_prime_UTR 35.0%
! CTTAATACCCTTTTGCATGT+TGG - chr8_3:67392123-67392142 Msa1304130:three_prime_UTR 35.0%
! ACGTCTTCAATAAGAAGTGT+CGG + chr8_3:67392208-67392227 None:intergenic 35.0%
CTTCTTATTGAAGACGTGTT+TGG - chr8_3:67392211-67392230 Msa1304130:three_prime_UTR 35.0%
CACTGACACATTAAAAACTG+AGG + chr8_3:67392280-67392299 None:intergenic 35.0%
TATACGTGTCAGTGATTCAT+AGG - chr8_3:67392573-67392592 Msa1304130:intron 35.0%
TGATTCATAGGTTTAGTTGC+TGG - chr8_3:67392585-67392604 Msa1304130:intron 35.0%
GATTCATAGGTTTAGTTGCT+GGG - chr8_3:67392586-67392605 Msa1304130:intron 35.0%
TAATGTGGAGCTATAAACCA+CGG - chr8_3:67392696-67392715 Msa1304130:CDS 35.0%
TATAAACCACGGACACTTAT+TGG - chr8_3:67392707-67392726 Msa1304130:CDS 35.0%
!! TATAAATGTCGGTGTCATGT+CGG + chr8_3:67392770-67392789 None:intergenic 35.0%
TCTCAAATTATTAGCGGTGT+CGG - chr8_3:67392812-67392831 Msa1304130:intron 35.0%
TGAGTGAAGAGATTTGGATT+TGG - chr8_3:67392905-67392924 Msa1304130:intron 35.0%
TTCAGAATCAGAGTGCAAAA+CGG + chr8_3:67392991-67393010 None:intergenic 35.0%
! TGCACTCTGATTCTGAAAAT+TGG - chr8_3:67392994-67393013 Msa1304130:intron 35.0%
TGATCCGCAAATTATAACAC+TGG + chr8_3:67393158-67393177 None:intergenic 35.0%
TGTCAAATAACAGCTACTGT+GGG + chr8_3:67393221-67393240 None:intergenic 35.0%
TTGTCAAATAACAGCTACTG+TGG + chr8_3:67393222-67393241 None:intergenic 35.0%
CATATGAACATGTGGTAGTT+TGG - chr8_3:67393416-67393435 Msa1304130:intron 35.0%
!!! GCCATTTTTTCTTGGTTTAC+CGG - chr8_3:67393453-67393472 Msa1304130:intron 35.0%
!!! CCATTTTTTCTTGGTTTACC+GGG - chr8_3:67393454-67393473 Msa1304130:intron 35.0%
!!! CATTTTTTCTTGGTTTACCG+GGG - chr8_3:67393455-67393474 Msa1304130:intron 35.0%
! AAAAAGTGGAAACGATTTGG+TGG + chr8_3:67393645-67393664 None:intergenic 35.0%
GACAAAAAGTGGAAACGATT+TGG + chr8_3:67393648-67393667 None:intergenic 35.0%
TAGAAGCGATTCAAACGAAT+GGG + chr8_3:67393674-67393693 None:intergenic 35.0%
!! CACAACTTGGAATTGATTTG+GGG - chr8_3:67393799-67393818 Msa1304130:CDS 35.0%
!! TGCATCAATCTTTTGAAGGT+TGG - chr8_3:67393923-67393942 Msa1304130:intron 35.0%
!! AGTTTGCCTAGTCTTATGTA+TGG + chr8_3:67394128-67394147 None:intergenic 35.0%
AAACCCATACAATGTTGAGA+TGG - chr8_3:67394151-67394170 Msa1304130:intron 35.0%
TCACCATCTCAACATTGTAT+GGG + chr8_3:67394157-67394176 None:intergenic 35.0%
TTCACCATCTCAACATTGTA+TGG + chr8_3:67394158-67394177 None:intergenic 35.0%
! GTTTGTAGGTATTGTACAGA+AGG - chr8_3:67394250-67394269 Msa1304130:intron 35.0%
! TTGTAGGTATTGTACAGAAG+GGG - chr8_3:67394252-67394271 Msa1304130:intron 35.0%
CGGCCTGTAAATATATAGAA+AGG - chr8_3:67394565-67394584 Msa1304130:intron 35.0%
GAGAGGTTCAATGATAAAAC+GGG + chr8_3:67394692-67394711 None:intergenic 35.0%
GTAAACTAGATCGAAGACAA+TGG + chr8_3:67394868-67394887 None:intergenic 35.0%
!! TAAGGATTTTGGCAATGCTT+TGG + chr8_3:67395007-67395026 None:intergenic 35.0%
! CTTTTGCAGTCATCAACATA+TGG - chr8_3:67395300-67395319 Msa1304130:intron 35.0%
AGTTATTCAGCTCACAGAAA+GGG - chr8_3:67395344-67395363 Msa1304130:CDS 35.0%
ATGAGTGATCATTTCTTGGT+AGG + chr8_3:67395379-67395398 None:intergenic 35.0%
!! CTCTATTTCTAACCCCAAAA+AGG - chr8_3:67395410-67395429 Msa1304130:intron 35.0%
AGGCTGTTTGAGAAAACTTA+TGG - chr8_3:67395554-67395573 Msa1304130:CDS 35.0%
! TTGAAGTCTTGATTTTGTGC+AGG - chr8_3:67396263-67396282 Msa1304130:intron 35.0%
!! CTTCTAAAGTCACACATGAT+TGG + chr8_3:67396454-67396473 None:intergenic 35.0%
! TCTAGGAGTTGCATTTTTGA+AGG - chr8_3:67396634-67396653 Msa1304130:intron 35.0%
TACACATGTAGCATACCAAT+AGG + chr8_3:67396707-67396726 None:intergenic 35.0%
!!! AAAGCCATTTTTTCAGTCAG+TGG - chr8_3:67396828-67396847 Msa1304130:intron 35.0%
!!! ATTTTTTCAGTCAGTGGCAA+GGG - chr8_3:67396834-67396853 Msa1304130:intron 35.0%
! TAGGTGTTACCAATAGCAAA+TGG - chr8_3:67397125-67397144 Msa1304130:intron 35.0%
CTAACACCGTGTTTATATCA+TGG + chr8_3:67397175-67397194 None:intergenic 35.0%
TGTTAGTGTGTTATGGTCTA+TGG - chr8_3:67397189-67397208 Msa1304130:intron 35.0%
!!! GATTTTTTACCAGGAGCTAT+AGG + chr8_3:67397247-67397266 None:intergenic 35.0%
TGTCAAATAGCCACCATTAT+TGG + chr8_3:67397277-67397296 None:intergenic 35.0%
ACAGGTTAAGTTTATAGGCA+TGG - chr8_3:67397505-67397524 Msa1304130:intron 35.0%
! TGCATTGAAATTTTGCTTGG+GGG + chr8_3:67397568-67397587 None:intergenic 35.0%
GTTATAGAATCAATGCGTAG+CGG + chr8_3:67397641-67397660 None:intergenic 35.0%
AACGATAAAAAGGCAACAAG+AGG + chr8_3:67397799-67397818 None:intergenic 35.0%
! TTGTCTTTATTTCCTCTAGG+AGG - chr8_3:67397821-67397840 Msa1304130:intron 35.0%
!!! GTTCAGGTTTTAGATTGTAC+TGG - chr8_3:67397843-67397862 Msa1304130:intron 35.0%
! TTTTATGCTTTGCTCAACTG+AGG - chr8_3:67397966-67397985 Msa1304130:intron 35.0%
TTTATGCTTTGCTCAACTGA+GGG - chr8_3:67397967-67397986 Msa1304130:intron 35.0%
! GGATGTTTGAAATCAACAAG+AGG + chr8_3:67397994-67398013 None:intergenic 35.0%
! TTTTCATCCATAGGATTCAC+TGG + chr8_3:67398015-67398034 None:intergenic 35.0%
! TGACATTCGTTTTCATCCAT+AGG + chr8_3:67398024-67398043 None:intergenic 35.0%
AACGAAGGAAATGCAAAAGA+TGG + chr8_3:67398098-67398117 None:intergenic 35.0%
!! AGAAGTTCTGAAAAGAACGA+AGG + chr8_3:67398113-67398132 None:intergenic 35.0%
! CAGTATGAATCTGGAATTGA+AGG + chr8_3:67398179-67398198 None:intergenic 35.0%
CAGGATAATGACAAAGTTGA+TGG - chr8_3:67398394-67398413 Msa1304130:intron 35.0%
AGCAATGTGATTGAAAGTCT+AGG - chr8_3:67398653-67398672 Msa1304130:five_prime_UTR 35.0%
GTGTTTCATCTGTGATTCCT+GGG - chr8_3:67392044-67392063 Msa1304130:three_prime_UTR 40.0%
CTAATTTCAGAAAACCACCC+AGG + chr8_3:67392064-67392083 None:intergenic 40.0%
AAAACTAACCTGGCCACATT+GGG + chr8_3:67392087-67392106 None:intergenic 40.0%
AAAAACTAACCTGGCCACAT+TGG + chr8_3:67392088-67392107 None:intergenic 40.0%
!!! GACGTGTTTGGTTTTTGACA+CGG - chr8_3:67392223-67392242 Msa1304130:three_prime_UTR 40.0%
GAATCACTGACACGTATACA+CGG + chr8_3:67392571-67392590 None:intergenic 40.0%
ATAGGTTTAGTTGCTGGGAA+AGG - chr8_3:67392591-67392610 Msa1304130:intron 40.0%
ACATCTATGAAGCACGGATA+CGG + chr8_3:67392873-67392892 None:intergenic 40.0%
AACTCCACATCTATGAAGCA+CGG + chr8_3:67392879-67392898 None:intergenic 40.0%
TGTCTCTGAGTGAAGAGATT+TGG - chr8_3:67392899-67392918 Msa1304130:intron 40.0%
TACATGCCAAGCAAACATCA+GGG + chr8_3:67393060-67393079 None:intergenic 40.0%
GTCAAATAACAGCTACTGTG+GGG + chr8_3:67393220-67393239 None:intergenic 40.0%
! TGTGGTAGTTTGGCTTACTT+TGG - chr8_3:67393426-67393445 Msa1304130:intron 40.0%
CCCGGTAAACCAAGAAAAAA+TGG + chr8_3:67393457-67393476 None:intergenic 40.0%
CTATGACCAGGGTCTTAAAT+TGG + chr8_3:67393483-67393502 None:intergenic 40.0%
AGAAGCGATTCAAACGAATG+GGG + chr8_3:67393673-67393692 None:intergenic 40.0%
GTAGAAGCGATTCAAACGAA+TGG + chr8_3:67393675-67393694 None:intergenic 40.0%
CAATAGACGCCAAACCAAAA+GGG + chr8_3:67393953-67393972 None:intergenic 40.0%
TCAATAGACGCCAAACCAAA+AGG + chr8_3:67393954-67393973 None:intergenic 40.0%
AATCAATTGGATGTCCGAGT+CGG - chr8_3:67394044-67394063 Msa1304130:CDS 40.0%
CACATCACAGTGTTTAGATC+TGG - chr8_3:67394202-67394221 Msa1304130:intron 40.0%
TGCTATGAAACAAAGACGTG+CGG - chr8_3:67394228-67394247 Msa1304130:intron 40.0%
TGAGAATTCATGAGCGTATC+CGG + chr8_3:67394440-67394459 None:intergenic 40.0%
GTTTATCTGCAGTCACTGAA+AGG - chr8_3:67394629-67394648 Msa1304130:intron 40.0%
ACAGAGCTTAAGAACTAGAG+AGG + chr8_3:67394709-67394728 None:intergenic 40.0%
AACTCTGGTTGTAACTTTGC+AGG - chr8_3:67395109-67395128 Msa1304130:intron 40.0%
GTCAGATTACCAGAAAGTCA+TGG - chr8_3:67395177-67395196 Msa1304130:intron 40.0%
TTACTTGAACCTCATGTACC+TGG + chr8_3:67395207-67395226 None:intergenic 40.0%
GATGACTGCAAAAGACATCA+TGG + chr8_3:67395294-67395313 None:intergenic 40.0%
!!! GGCAAGGTTTTTGTTTTGGA+TGG - chr8_3:67395321-67395340 Msa1304130:CDS 40.0%
GAGTTATTCAGCTCACAGAA+AGG - chr8_3:67395343-67395362 Msa1304130:CDS 40.0%
GCAGATGAGTGATCATTTCT+TGG + chr8_3:67395383-67395402 None:intergenic 40.0%
GGGTTAGAAATAGAGCAAAG+AGG + chr8_3:67395405-67395424 None:intergenic 40.0%
GTGTGTTTGAGCTTATTTGC+TGG - chr8_3:67395517-67395536 Msa1304130:intron 40.0%
!!! TAGGTTTTGGTTATTGGTGG+AGG - chr8_3:67395795-67395814 Msa1304130:intron 40.0%
CACAGATGAGGTTGACATTA+CGG + chr8_3:67395995-67396014 None:intergenic 40.0%
! TTTTTCCCTGAAGTTGCAGT+AGG - chr8_3:67396297-67396316 Msa1304130:intron 40.0%
! TTTTCCCTGAAGTTGCAGTA+GGG - chr8_3:67396298-67396317 Msa1304130:intron 40.0%
TAAACCCTACTGCAACTTCA+GGG + chr8_3:67396305-67396324 None:intergenic 40.0%
TTAAACCCTACTGCAACTTC+AGG + chr8_3:67396306-67396325 None:intergenic 40.0%
! CATGATGACTTTTCCCACAA+TGG - chr8_3:67396611-67396630 Msa1304130:intron 40.0%
ACTGCATCATAAGTTCCTTC+TGG + chr8_3:67396665-67396684 None:intergenic 40.0%
GTGGATTCATCTGATCCTAT+TGG - chr8_3:67396689-67396708 Msa1304130:intron 40.0%
! CTTGCCACTGACTGAAAAAA+TGG + chr8_3:67396835-67396854 None:intergenic 40.0%
!!! CATTTTTTCAGTCAGTGGCA+AGG - chr8_3:67396833-67396852 Msa1304130:intron 40.0%
AAGGCTCTGTCAATTATGCT+TGG - chr8_3:67396956-67396975 Msa1304130:intron 40.0%
CTACAGTTCCTACATATCCA+AGG - chr8_3:67396980-67396999 Msa1304130:intron 40.0%
! GCTATTGGTAACACCTATTG+TGG + chr8_3:67397122-67397141 None:intergenic 40.0%
GTGTTACCAATAGCAAATGG+CGG - chr8_3:67397128-67397147 Msa1304130:intron 40.0%
!! CAATAGCAAATGGCGGATTA+CGG - chr8_3:67397135-67397154 Msa1304130:intron 40.0%
! AACACGGTGTTAGTGTGTTA+TGG - chr8_3:67397182-67397201 Msa1304130:intron 40.0%
GGTCTATGGCAGAAAAATAG+CGG - chr8_3:67397203-67397222 Msa1304130:intron 40.0%
AAAATCCGCCATGCCAATAA+TGG - chr8_3:67397261-67397280 Msa1304130:intron 40.0%
AATAGCCACCATTATTGGCA+TGG + chr8_3:67397272-67397291 None:intergenic 40.0%
!!! GTCAGACCCGTTTTAGAAAA+GGG + chr8_3:67397317-67397336 None:intergenic 40.0%
! TTCCCTGTTTGAGTTCTGTA+AGG - chr8_3:67397394-67397413 Msa1304130:intron 40.0%
TGCCTTACAGAACTCAAACA+GGG + chr8_3:67397399-67397418 None:intergenic 40.0%
ATGCCTTACAGAACTCAAAC+AGG + chr8_3:67397400-67397419 None:intergenic 40.0%
! GCATTGAAATTTTGCTTGGG+GGG + chr8_3:67397567-67397586 None:intergenic 40.0%
! TTATTTCCTCTAGGAGGTTC+AGG - chr8_3:67397827-67397846 Msa1304130:intron 40.0%
CAAACATCCAGTGAATCCTA+TGG - chr8_3:67398005-67398024 Msa1304130:intron 40.0%
GGAAATGCAAAAGATGGTTG+AGG + chr8_3:67398092-67398111 None:intergenic 40.0%
AGAAAGCTGCAGTATGAATC+TGG + chr8_3:67398188-67398207 None:intergenic 40.0%
! CTCGATTGGTCATCTATCAA+CGG - chr8_3:67398318-67398337 Msa1304130:intron 40.0%
GGTGTTTCATCTGTGATTCC+TGG - chr8_3:67392043-67392062 Msa1304130:three_prime_UTR 45.0%
TTTCATCTGTGATTCCTGGG+TGG - chr8_3:67392047-67392066 Msa1304130:three_prime_UTR 45.0%
!! AGTGTCGGTACTACTACTAC+TGG + chr8_3:67392193-67392212 None:intergenic 45.0%
GTTGTTTACCGTGTCTGTGT+CGG - chr8_3:67392299-67392318 Msa1304130:three_prime_UTR 45.0%
ATGAATCACCGACACAGACA+CGG + chr8_3:67392310-67392329 None:intergenic 45.0%
! TGTCTGTGTCGGTGATTCAT+TGG - chr8_3:67392310-67392329 Msa1304130:three_prime_UTR 45.0%
! GGTGATTCATTGGCTGGAAA+AGG - chr8_3:67392320-67392339 Msa1304130:three_prime_UTR 45.0%
GTATCCGTGCTTCATAGATG+TGG - chr8_3:67392872-67392891 Msa1304130:intron 45.0%
AGAATCAGAGTGCAAAACGG+TGG + chr8_3:67392988-67393007 None:intergenic 45.0%
CAAGTTCCCTGATGTTTGCT+TGG - chr8_3:67393051-67393070 Msa1304130:intron 45.0%
GTACATGCCAAGCAAACATC+AGG + chr8_3:67393061-67393080 None:intergenic 45.0%
ACATCGGCACTATATCCTAG+AGG + chr8_3:67393295-67393314 None:intergenic 45.0%
AGGGTCTTAAATTGGTACCC+CGG + chr8_3:67393475-67393494 None:intergenic 45.0%
!! AGTGGAAACGATTTGGTGGA+GGG + chr8_3:67393641-67393660 None:intergenic 45.0%
!! AAGTGGAAACGATTTGGTGG+AGG + chr8_3:67393642-67393661 None:intergenic 45.0%
CGAATGGGGAAGACAAAAAG+TGG + chr8_3:67393659-67393678 None:intergenic 45.0%
ATCGCTTCTACCTTTCTCCA+TGG - chr8_3:67393684-67393703 Msa1304130:intron 45.0%
CAGCAACAGGTTTCACAACT+TGG - chr8_3:67393786-67393805 Msa1304130:CDS 45.0%
ATCAATTGGATGTCCGAGTC+GGG - chr8_3:67394045-67394064 Msa1304130:CDS 45.0%
AACAAAGACGTGCGGTTTGT+AGG - chr8_3:67394236-67394255 Msa1304130:intron 45.0%
TGTACAGAAGGGGATGCAAT+AGG - chr8_3:67394262-67394281 Msa1304130:intron 45.0%
GTACAGAAGGGGATGCAATA+GGG - chr8_3:67394263-67394282 Msa1304130:intron 45.0%
ATAGGGTTGCTGAGTGATAG+TGG - chr8_3:67394280-67394299 Msa1304130:intron 45.0%
!! TGATAGTGGAAGGAGGTAAG+AGG - chr8_3:67394294-67394313 Msa1304130:intron 45.0%
!! GATAGTGGAAGGAGGTAAGA+GGG - chr8_3:67394295-67394314 Msa1304130:intron 45.0%
AGGTAAGAGGGAGAATTGAG+TGG - chr8_3:67394307-67394326 Msa1304130:intron 45.0%
TAAGAGGGAGAATTGAGTGG+AGG - chr8_3:67394310-67394329 Msa1304130:intron 45.0%
GAAGACAATGGTCCTAGGAT+TGG + chr8_3:67394856-67394875 None:intergenic 45.0%
AGATCGAAGACAATGGTCCT+AGG + chr8_3:67394861-67394880 None:intergenic 45.0%
GCAGTCATCAACATATGGCA+AGG - chr8_3:67395305-67395324 Msa1304130:CDS 45.0%
TTGGTTATTGGTGGAGGTGA+TGG - chr8_3:67395801-67395820 Msa1304130:intron 45.0%
TGTGGTCACAACTATGGTTG+CGG - chr8_3:67395969-67395988 Msa1304130:intron 45.0%
ATTGTGATTCTGGTCGCGTT+AGG + chr8_3:67396043-67396062 None:intergenic 45.0%
! GACTTTTCCCACAATGGTCT+AGG - chr8_3:67396617-67396636 Msa1304130:intron 45.0%
TGCAACTCCTAGACCATTGT+GGG + chr8_3:67396627-67396646 None:intergenic 45.0%
ATGCAACTCCTAGACCATTG+TGG + chr8_3:67396628-67396647 None:intergenic 45.0%
!! TTTTTGAAGGCAGCTCCAGA+AGG - chr8_3:67396647-67396666 Msa1304130:intron 45.0%
ATATCCTTAAGGTCCTGCTC+AGG - chr8_3:67396795-67396814 Msa1304130:intron 45.0%
! TTTTCGAAAAGCTCCTGAGC+AGG + chr8_3:67396811-67396830 None:intergenic 45.0%
! GCACTCAGGCTGAAAGTATA+TGG - chr8_3:67396881-67396900 Msa1304130:intron 45.0%
!! CGTAATCCGCCATTTGCTAT+TGG + chr8_3:67397137-67397156 None:intergenic 45.0%
!!! GGTCAGACCCGTTTTAGAAA+AGG + chr8_3:67397318-67397337 None:intergenic 45.0%
TTGTCAATTGCGAATCGCAG+AGG - chr8_3:67397596-67397615 Msa1304130:intron 45.0%
CTAAAACCTGAACCTCCTAG+AGG + chr8_3:67397836-67397855 None:intergenic 45.0%
TGAGCTCAAAGTAGCTCATG+TGG - chr8_3:67398266-67398285 Msa1304130:intron 45.0%
CAACGGACCATGGAATAAGT+CGG - chr8_3:67398335-67398354 Msa1304130:intron 45.0%
!! TTAGGCACCGACTTATTCCA+TGG + chr8_3:67398345-67398364 None:intergenic 45.0%
! TCTTTTATGGTCTGTGCCTG+TGG - chr8_3:67398565-67398584 Msa1304130:intron 45.0%
! TGGCGTGTCTTGAATGCTTT+TGG - chr8_3:67398585-67398604 Msa1304130:intron 45.0%
!!! TTTTTTTTTTTTTTTTGTAT+TGG + chr8_3:67394982-67395001 None:intergenic 5.0%
!! TCAAAAAAAAAAAAAATAAT+AGG + chr8_3:67397426-67397445 None:intergenic 5.0%
GAAATTAGCCCAATGTGGCC+AGG - chr8_3:67392076-67392095 Msa1304130:three_prime_UTR 50.0%
! TGTGTCGGTGATTCATTGGC+TGG - chr8_3:67392314-67392333 Msa1304130:three_prime_UTR 50.0%
CCTAAGCCAATAAGTGTCCG+TGG + chr8_3:67392716-67392735 None:intergenic 50.0%
!! CCACGGACACTTATTGGCTT+AGG - chr8_3:67392713-67392732 Msa1304130:CDS 50.0%
!! TTATTGGCTTAGGCGTGTCC+CGG - chr8_3:67392723-67392742 Msa1304130:CDS 50.0%
ATGAAGCACGGATACGGACA+CGG + chr8_3:67392867-67392886 None:intergenic 50.0%
! GGGGTACCAATTTAAGACCC+TGG - chr8_3:67393474-67393493 Msa1304130:intron 50.0%
!! GTGGAAACGATTTGGTGGAG+GGG + chr8_3:67393640-67393659 None:intergenic 50.0%
!! TGAAGGTTGGCCAACCCTTT+TGG - chr8_3:67393936-67393955 Msa1304130:intron 50.0%
!! GTTGGCCAACCCTTTTGGTT+TGG - chr8_3:67393941-67393960 Msa1304130:intron 50.0%
AGACGCCAAACCAAAAGGGT+TGG + chr8_3:67393949-67393968 None:intergenic 50.0%
CATGTCATATAGGCCCGACT+CGG + chr8_3:67394061-67394080 None:intergenic 50.0%
!! GGTTGCTGAGTGATAGTGGA+AGG - chr8_3:67394284-67394303 Msa1304130:intron 50.0%
!! TGCTGAGTGATAGTGGAAGG+AGG - chr8_3:67394287-67394306 Msa1304130:intron 50.0%
CAGTGACTGCAGATAAACGC+TGG + chr8_3:67394627-67394646 None:intergenic 50.0%
CCTGGAAGACCATGACTTTC+TGG + chr8_3:67395189-67395208 None:intergenic 50.0%
CCAGAAAGTCATGGTCTTCC+AGG - chr8_3:67395186-67395205 Msa1304130:intron 50.0%
CATGGTCTTCCAGGTACATG+AGG - chr8_3:67395195-67395214 Msa1304130:intron 50.0%
TGCTGGCATAAACACTTGCG+AGG - chr8_3:67395534-67395553 Msa1304130:CDS 50.0%
! GTTATTGGTGGAGGTGATGG+TGG - chr8_3:67395804-67395823 Msa1304130:intron 50.0%
!! AATGACGTGCTACTTCTCGC+AGG + chr8_3:67395833-67395852 None:intergenic 50.0%
! GTGACTCTTCGCATTGGTGA+TGG - chr8_3:67396336-67396355 Msa1304130:intron 50.0%
TGAGTGCACATAACTCCTCC+TGG + chr8_3:67396868-67396887 None:intergenic 50.0%
AGGAGGAGTTATGTGCACTC+AGG - chr8_3:67396867-67396886 Msa1304130:intron 50.0%
!!! GGCATGGCGGATTTTTTACC+AGG + chr8_3:67397256-67397275 None:intergenic 50.0%
ATCCGCCATGCCAATAATGG+TGG - chr8_3:67397264-67397283 Msa1304130:intron 50.0%
AGCCACCATTATTGGCATGG+CGG + chr8_3:67397269-67397288 None:intergenic 50.0%
ACCCTCCAAGGATCCTGATA+TGG - chr8_3:67397335-67397354 Msa1304130:intron 50.0%
GCCATATCAGGATCCTTGGA+GGG + chr8_3:67397339-67397358 None:intergenic 50.0%
CTCCAAGGATCCTGATATGG+CGG - chr8_3:67397338-67397357 Msa1304130:intron 50.0%
TCCAAGGATCCTGATATGGC+GGG - chr8_3:67397339-67397358 Msa1304130:intron 50.0%
TATACAGCTCCCGCCATATC+AGG + chr8_3:67397351-67397370 None:intergenic 50.0%
TTGCGAATCGCAGAGGATAG+TGG - chr8_3:67397603-67397622 Msa1304130:intron 50.0%
ATCTTCCTCCTCGCAAACGA+CGG + chr8_3:67398216-67398235 None:intergenic 50.0%
TCGTTTGCGAGGAGGAAGAT+TGG - chr8_3:67398216-67398235 Msa1304130:intron 50.0%
GGTCATCTATCAACGGACCA+TGG - chr8_3:67398325-67398344 Msa1304130:intron 50.0%
AAGCATTCAAGACACGCCAC+AGG + chr8_3:67398584-67398603 None:intergenic 50.0%
TCAGACACGTCACGACACAC+CGG + chr8_3:67392745-67392764 None:intergenic 55.0%
TAACAGCTACTGTGGGGCTG+TGG + chr8_3:67393214-67393233 None:intergenic 55.0%
CCAATGCGAAGAGTCACACG+TGG + chr8_3:67396333-67396352 None:intergenic 55.0%
CCACGTGTGACTCTTCGCAT+TGG - chr8_3:67396330-67396349 Msa1304130:intron 55.0%
AGCTCCTGAGCAGGACCTTA+AGG + chr8_3:67396802-67396821 None:intergenic 55.0%
GGTTTGCGACCTATAGCTCC+TGG - chr8_3:67397235-67397254 Msa1304130:intron 55.0%
AAAACGGGTCTGACCCTCCA+AGG - chr8_3:67397323-67397342 Msa1304130:intron 55.0%
CGCCATATCAGGATCCTTGG+AGG + chr8_3:67397340-67397359 None:intergenic 55.0%
TCCCGCCATATCAGGATCCT+TGG + chr8_3:67397343-67397362 None:intergenic 55.0%
TCTGTTTGCCGTCGTTTGCG+AGG - chr8_3:67398205-67398224 Msa1304130:intron 55.0%
CAGACACGTCACGACACACC+GGG + chr8_3:67392744-67392763 None:intergenic 60.0%
GTCTGTGTGCGTGTCGTGTC+TGG - chr8_3:67392838-67392857 Msa1304130:intron 60.0%
GTTTGCCGTCGTTTGCGAGG+AGG - chr8_3:67398208-67398227 Msa1304130:intron 60.0%
GTGGCAAGGGCTCTTCGTCC+AGG - chr8_3:67396847-67396866 Msa1304130:intron 65.0%
GCAAGGGCTCTTCGTCCAGG+AGG - chr8_3:67396850-67396869 Msa1304130:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 67392034 67398699 67392034 ID=Msa1304130;Name=Msa1304130
chr8_3 mRNA 67392034 67398699 67392034 ID=Msa1304130-mRNA-1;Parent=Msa1304130;Name=Msa1304130-mRNA-1;_AED=0.18;_eAED=0.18;_QI=54|0.87|0.77|1|0.87|1|9|445|269
chr8_3 exon 67392034 67392544 67392034 ID=Msa1304130-mRNA-1:exon:20719;Parent=Msa1304130-mRNA-1
chr8_3 exon 67392653 67392779 67392653 ID=Msa1304130-mRNA-1:exon:20718;Parent=Msa1304130-mRNA-1
chr8_3 exon 67393732 67393927 67393732 ID=Msa1304130-mRNA-1:exon:20717;Parent=Msa1304130-mRNA-1
chr8_3 exon 67394023 67394077 67394023 ID=Msa1304130-mRNA-1:exon:20716;Parent=Msa1304130-mRNA-1
chr8_3 exon 67394398 67394448 67394398 ID=Msa1304130-mRNA-1:exon:20715;Parent=Msa1304130-mRNA-1
chr8_3 exon 67394831 67394935 67394831 ID=Msa1304130-mRNA-1:exon:20714;Parent=Msa1304130-mRNA-1
chr8_3 exon 67395302 67395424 67395302 ID=Msa1304130-mRNA-1:exon:20713;Parent=Msa1304130-mRNA-1
chr8_3 exon 67395526 67395602 67395526 ID=Msa1304130-mRNA-1:exon:20712;Parent=Msa1304130-mRNA-1
chr8_3 exon 67398636 67398699 67398636 ID=Msa1304130-mRNA-1:exon:20711;Parent=Msa1304130-mRNA-1
chr8_3 five_prime_UTR 67398646 67398699 67398646 ID=Msa1304130-mRNA-1:five_prime_utr;Parent=Msa1304130-mRNA-1
chr8_3 CDS 67398636 67398645 67398636 ID=Msa1304130-mRNA-1:cds;Parent=Msa1304130-mRNA-1
chr8_3 CDS 67395526 67395602 67395526 ID=Msa1304130-mRNA-1:cds;Parent=Msa1304130-mRNA-1
chr8_3 CDS 67395302 67395424 67395302 ID=Msa1304130-mRNA-1:cds;Parent=Msa1304130-mRNA-1
chr8_3 CDS 67394831 67394935 67394831 ID=Msa1304130-mRNA-1:cds;Parent=Msa1304130-mRNA-1
chr8_3 CDS 67394398 67394448 67394398 ID=Msa1304130-mRNA-1:cds;Parent=Msa1304130-mRNA-1
chr8_3 CDS 67394023 67394077 67394023 ID=Msa1304130-mRNA-1:cds;Parent=Msa1304130-mRNA-1
chr8_3 CDS 67393732 67393927 67393732 ID=Msa1304130-mRNA-1:cds;Parent=Msa1304130-mRNA-1
chr8_3 CDS 67392653 67392779 67392653 ID=Msa1304130-mRNA-1:cds;Parent=Msa1304130-mRNA-1
chr8_3 CDS 67392479 67392544 67392479 ID=Msa1304130-mRNA-1:cds;Parent=Msa1304130-mRNA-1
chr8_3 three_prime_UTR 67392034 67392478 67392034 ID=Msa1304130-mRNA-1:three_prime_utr;Parent=Msa1304130-mRNA-1
Gene Sequence

>Msa1304130

ATGTGGCCAGGAGAAGCTCACTCCTTGAAGATAGAAAAGATTTTGTTTCAAGGAAAGTCAGATTACCAGAAAGTCATGGTCTTCCAGTCATCAACATATGGCAAGGTTTTTGTTTTGGATGGAGTTATTCAGCTCACAGAAAGGGACGAATGTGCCTACCAAGAAATGATCACTCATCTGCCTCTTTGCTCTATTTCTAACCCCAAAAAGGTTTTGGTTATTGGTGGAGGTGATGGTGGAGTCCTGCGAGAAGTAGCACGTCATTCTTCAATTGAAAAGATAGACATTTGTGAAATTGACAATATGGTTGTTGAAGTTTCCAAACAATTTTTCCCTGAAGTTGCAGTAGGGTTTAACGATCCACGTGCAGCTCCAGAAGGAACTTATGATGCAGTTATAGTGGATTCATCTGATCCTATTGGTCCTGCTCAGGAGCTTTTCGAAAAGCCATTTTTTCAGTCAGTGGCAAGGGCTCTTCGTCCAGGAGGAGTTATGTGCACTCAGGCTGAAAGTATATGGCTTCATATGGATATAATTGAGGACATTGTGTCCAATTGTCGTCAGATTTTCAAAGGCTCTGTCAATTATGCTTGGACTACAGTTCCTACATATCCAAGTGGGATGATTGGTTTTATGCTTTGCTCAACTGAGGGACCTCTTGTTGATTTCAAACATCCAGTGAATCCTATGGATGAAAACGAATGTCAGAAGTCAGTAAGACCACTCAAATTTTACAACTCTGAGATTCATACTGCAGCTTTCTGTTTGCCGTCGTTTGCGAGGAGGAAGATTGGTTCCAAAGAAAACTGA

Protein sequence

>Msa1304130

MWPGEAHSLKIEKILFQGKSDYQKVMVFQSSTYGKVFVLDGVIQLTERDECAYQEMITHLPLCSISNPKKVLVIGGGDGGVLREVARHSSIEKIDICEIDNMVVEVSKQFFPEVAVGFNDPRAAPEGTYDAVIVDSSDPIGPAQELFEKPFFQSVARALRPGGVMCTQAESIWLHMDIIEDIVSNCRQIFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPLVDFKHPVNPMDENECQKSVRPLKFYNSEIHTAAFCLPSFARRKIGSKEN*