AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1305500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1305500 MtrunA17_Chr6g0484441 97.561 328 5 1 1 328 1 325 0.0 666
Msa1305500 MtrunA17_Chr3g0091921 57.384 237 88 4 5 229 16 251 9.44e-89 268
Msa1305500 MtrunA17_Chr4g0060931 66.332 199 54 4 4 198 16 205 9.55e-89 270
Msa1305500 MtrunA17_Chr3g0139331 71.429 175 38 2 2 174 8 172 8.79e-87 264
Msa1305500 MtrunA17_Chr1g0147421 76.730 159 34 2 2 157 24 182 5.42e-85 260
Msa1305500 MtrunA17_Chr2g0316971 75.796 157 32 3 2 152 20 176 5.06e-83 256
Msa1305500 MtrunA17_Chr6g0453451 70.701 157 42 1 5 157 20 176 1.91e-81 250
Msa1305500 MtrunA17_Chr7g0253011 67.665 167 46 3 4 162 16 182 2.41e-77 241
Msa1305500 MtrunA17_Chr6g0461661 63.690 168 52 4 4 164 17 182 4.15e-70 223
Msa1305500 MtrunA17_Chr7g0217721 63.473 167 44 2 8 157 22 188 5.01e-70 221
Msa1305500 MtrunA17_Chr2g0312321 43.726 263 135 6 1 258 7 261 1.70e-68 216
Msa1305500 MtrunA17_Chr3g0144271 61.143 175 57 5 2 170 20 189 1.55e-65 212
Msa1305500 MtrunA17_Chr7g0217711 71.654 127 36 0 5 131 19 145 2.06e-64 201
Msa1305500 MtrunA17_Chr4g0018391 50.000 192 90 2 4 192 6 194 2.79e-62 201
Msa1305500 MtrunA17_Chr4g0056541 53.801 171 73 2 4 171 6 173 7.28e-61 198
Msa1305500 MtrunA17_Chr5g0398971 54.070 172 69 4 4 170 6 172 5.43e-60 196
Msa1305500 MtrunA17_Chr7g0252971 36.310 336 150 10 2 310 5 303 5.81e-60 195
Msa1305500 MtrunA17_Chr8g0359921 57.595 158 63 2 4 157 13 170 1.30e-59 194
Msa1305500 MtrunA17_Chr2g0318081 56.051 157 67 1 4 158 15 171 1.87e-59 194
Msa1305500 MtrunA17_Chr4g0042561 45.714 210 102 2 5 208 9 212 3.40e-59 191
Msa1305500 MtrunA17_Chr2g0318101 40.072 277 133 7 2 253 12 280 4.18e-59 193
Msa1305500 MtrunA17_Chr5g0405211 54.545 154 67 1 1 151 4 157 9.83e-59 192
Msa1305500 MtrunA17_Chr2g0309891 57.792 154 60 2 5 153 6 159 1.04e-58 192
Msa1305500 MtrunA17_Chr2g0309331 40.244 246 123 3 2 243 7 232 1.16e-58 192
Msa1305500 MtrunA17_Chr4g0017921 60.000 150 56 2 5 151 8 156 1.26e-58 192
Msa1305500 MtrunA17_Chr1g0183741 56.291 151 62 2 4 152 9 157 8.94e-58 187
Msa1305500 MtrunA17_Chr3g0124761 55.280 161 66 2 2 157 4 163 1.05e-57 188
Msa1305500 MtrunA17_Chr4g0047841 51.648 182 61 4 5 159 15 196 1.36e-57 189
Msa1305500 MtrunA17_Chr1g0200561 50.932 161 76 1 1 158 15 175 1.60e-57 189
Msa1305500 MtrunA17_Chr6g0481091 48.500 200 93 5 4 197 5 200 3.40e-57 185
Msa1305500 MtrunA17_Chr8g0372121 50.943 159 75 1 1 156 2 160 3.85e-57 187
Msa1305500 MtrunA17_Chr5g0417791 53.165 158 68 1 5 156 3 160 4.85e-57 185
Msa1305500 MtrunA17_Chr5g0433781 58.553 152 59 2 5 152 6 157 1.16e-56 194
Msa1305500 MtrunA17_Chr7g0263931 55.063 158 63 2 2 151 8 165 2.01e-56 186
Msa1305500 MtrunA17_Chr3g0109821 58.170 153 59 2 5 152 6 158 3.61e-56 193
Msa1305500 MtrunA17_Chr7g0261411 56.081 148 61 2 5 150 10 155 5.45e-56 183
Msa1305500 MtrunA17_Chr8g0346001 52.174 161 63 2 5 151 15 175 5.55e-55 185
Msa1305500 MtrunA17_Chr8g0384721 51.429 175 71 4 5 168 7 178 1.54e-54 179
Msa1305500 MtrunA17_Chr3g0130731 54.601 163 64 3 2 157 4 163 7.94e-54 178
Msa1305500 MtrunA17_Chr2g0326361 52.500 160 68 2 5 156 14 173 2.10e-52 175
Msa1305500 MtrunA17_Chr7g0214071 51.266 158 72 2 2 157 12 166 2.84e-51 170
Msa1305500 MtrunA17_Chr3g0092671 54.140 157 64 4 7 157 7 161 3.64e-49 172
Msa1305500 MtrunA17_Chr8g0361731 45.882 170 79 3 1 157 10 179 7.57e-49 168
Msa1305500 MtrunA17_Chr6g0453131 37.050 278 150 7 3 258 13 287 7.70e-49 168
Msa1305500 MtrunA17_Chr5g0400461 35.789 285 151 7 4 274 5 271 9.64e-49 166
Msa1305500 MtrunA17_Chr5g0417001 46.154 169 79 3 1 157 10 178 2.28e-48 166
Msa1305500 MtrunA17_Chr1g0197361 52.258 155 70 3 7 157 10 164 3.34e-48 170
Msa1305500 MtrunA17_Chr5g0428991 52.318 151 68 2 5 151 25 175 2.14e-47 169
Msa1305500 MtrunA17_Chr3g0130101 51.678 149 68 2 7 151 9 157 3.33e-47 162
Msa1305500 MtrunA17_Chr3g0128151 52.318 151 68 2 5 151 22 172 4.45e-47 167
Msa1305500 MtrunA17_Chr4g0076731 49.333 150 69 2 7 152 56 202 4.48e-47 164
Msa1305500 MtrunA17_Chr3g0128111 50.336 149 70 2 8 152 45 193 6.09e-47 159
Msa1305500 MtrunA17_Chr4g0054791 43.429 175 86 4 4 168 5 176 1.87e-45 157
Msa1305500 MtrunA17_Chr8g0364791 48.344 151 74 2 5 151 6 156 8.09e-45 158
Msa1305500 MtrunA17_Chr3g0113001 58.462 130 49 2 54 178 14 143 1.54e-44 154
Msa1305500 MtrunA17_Chr1g0197351 50.633 158 68 2 4 151 41 198 4.45e-44 157
Msa1305500 MtrunA17_Chr1g0201021 48.667 150 73 2 7 152 21 170 2.67e-43 156
Msa1305500 MtrunA17_Chr8g0384201 47.020 151 76 2 5 151 6 156 8.41e-43 154
Msa1305500 MtrunA17_Chr2g0311651 36.170 235 125 6 2 216 18 247 2.05e-42 149
Msa1305500 MtrunA17_Chr4g0038751 42.073 164 89 2 7 167 17 177 5.90e-42 147
Msa1305500 MtrunA17_Chr5g0442771 41.860 172 82 3 2 157 15 184 9.95e-42 147
Msa1305500 MtrunA17_Chr2g0311661 41.714 175 83 4 2 157 17 191 1.14e-41 146
Msa1305500 MtrunA17_Chr8g0385991 43.137 153 76 3 5 148 14 164 7.50e-39 137
Msa1305500 MtrunA17_Chr3g0131911 41.975 162 80 3 5 154 14 173 2.75e-37 133
Msa1305500 MtrunA17_Chr8g0345671 46.667 150 71 5 4 148 10 155 3.13e-36 134
Msa1305500 MtrunA17_Chr3g0113031 55.462 119 47 2 66 178 1 119 3.31e-36 131
Msa1305500 MtrunA17_Chr4g0026141 40.719 167 88 6 1 156 1 167 6.00e-34 125
Msa1305500 MtrunA17_Chr8g0345691 44.371 151 75 6 3 148 10 156 3.33e-33 127
Msa1305500 MtrunA17_Chr2g0321741 47.826 115 54 2 35 148 22 131 8.18e-33 124
Msa1305500 MtrunA17_Chr2g0321631 39.103 156 83 6 6 149 5 160 2.19e-30 115
Msa1305500 MtrunA17_Chr4g0050701 33.854 192 106 4 5 186 11 191 5.15e-30 113
Msa1305500 MtrunA17_Chr7g0266701 39.024 164 86 6 3 152 2 165 5.18e-30 114
Msa1305500 MtrunA17_Chr8g0345701 40.994 161 68 7 4 145 6 158 9.10e-29 109
Msa1305500 MtrunA17_Chr8g0345711 42.857 133 70 4 1 128 8 139 9.23e-29 109
Msa1305500 MtrunA17_Chr8g0345731 40.260 154 80 6 5 151 24 172 2.91e-26 102
Msa1305500 MtrunA17_Chr8g0384351 41.060 151 63 6 5 151 10 138 3.23e-25 100
Msa1305500 MtrunA17_Chr8g0345721 34.132 167 70 5 1 128 26 191 1.82e-23 96.3
Msa1305500 MtrunA17_Chr7g0243371 51.899 79 36 1 58 134 17 95 2.67e-22 90.1
Msa1305500 MtrunA17_Chr8g0345741 39.831 118 65 5 16 128 2 118 8.92e-21 87.4
Msa1305500 MtrunA17_Chr3g0130321 35.802 162 80 6 5 150 7 160 2.37e-19 84.7
Msa1305500 MtrunA17_Chr3g0113011 67.347 49 16 0 5 53 19 67 1.93e-18 78.6
Msa1305500 MtrunA17_Chr7g0251661 33.077 130 81 4 2 128 7 133 1.20e-17 79.0
Msa1305500 MtrunA17_Chr3g0113041 68.889 45 14 0 9 53 23 67 3.18e-17 75.1
Msa1305500 MtrunA17_Chr4g0046431 30.366 191 110 6 5 179 68 251 2.35e-15 75.5
Msa1305500 MtrunA17_Chr7g0251651 28.758 153 103 5 5 154 18 167 3.56e-15 73.2
Msa1305500 MtrunA17_Chr2g0282871 32.317 164 92 6 5 152 53 213 3.98e-15 74.7
Msa1305500 MtrunA17_Chr7g0251671 29.710 138 91 4 1 135 6 140 1.65e-14 70.5
Msa1305500 MtrunA17_Chr5g0422431 30.168 179 107 6 5 168 58 233 3.76e-14 72.8
Msa1305500 MtrunA17_Chr8g0389661 30.270 185 95 8 5 164 47 222 6.83e-13 69.3
Msa1305500 MtrunA17_Chr1g0198751 28.889 180 108 8 5 168 58 233 9.25e-13 68.9
Msa1305500 MtrunA17_Chr2g0324961 33.793 145 75 5 4 130 48 189 2.31e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1305500 AT3G18400.1 58.407 339 105 12 1 328 1 314 2.70e-118 344
Msa1305500 AT5G61430.1 75.316 158 35 2 4 157 15 172 5.43e-85 259
Msa1305500 AT5G53950.1 77.922 154 28 3 5 152 17 170 7.99e-84 258
Msa1305500 AT2G24430.2 75.472 159 36 2 2 157 13 171 1.51e-83 255
Msa1305500 AT2G24430.1 75.472 159 36 2 2 157 13 171 1.51e-83 255
Msa1305500 AT5G07680.2 72.152 158 40 2 4 157 2 159 2.35e-82 252
Msa1305500 AT5G07680.1 72.152 158 40 2 4 157 16 173 3.12e-82 253
Msa1305500 AT5G39610.1 73.750 160 37 2 4 158 19 178 7.33e-82 250
Msa1305500 AT5G18270.2 72.549 153 37 2 4 151 20 172 7.08e-80 246
Msa1305500 AT5G18270.1 71.895 153 38 2 4 151 20 172 2.80e-79 245
Msa1305500 AT3G04060.1 71.895 153 38 2 4 151 19 171 2.35e-77 240
Msa1305500 AT1G76420.1 69.620 158 45 2 2 156 19 176 3.21e-76 237
Msa1305500 AT3G29035.1 71.523 151 39 1 4 150 23 173 1.64e-75 235
Msa1305500 AT3G15170.1 57.282 206 79 5 2 201 17 219 3.09e-73 229
Msa1305500 AT1G56010.2 59.236 157 58 2 1 151 15 171 6.61e-65 208
Msa1305500 AT3G12977.1 59.740 154 59 2 1 151 14 167 1.68e-64 205
Msa1305500 AT4G27410.2 42.797 236 122 4 4 237 13 237 4.12e-62 200
Msa1305500 AT1G71930.2 51.553 161 75 1 1 158 5 165 1.23e-60 197
Msa1305500 AT1G71930.1 51.553 161 75 1 1 158 5 165 1.23e-60 197
Msa1305500 AT3G04070.2 46.256 227 90 7 4 205 9 228 4.24e-60 196
Msa1305500 AT3G10500.1 58.861 158 61 2 4 157 8 165 1.75e-59 200
Msa1305500 AT5G62380.2 56.129 155 65 1 4 155 6 160 1.96e-59 194
Msa1305500 AT5G62380.1 56.129 155 65 1 4 155 6 160 1.96e-59 194
Msa1305500 AT1G33280.1 52.151 186 73 3 5 175 8 192 2.74e-59 193
Msa1305500 AT3G04070.1 43.388 242 89 6 5 205 10 244 8.78e-59 193
Msa1305500 AT1G12260.2 54.194 155 68 1 4 155 6 160 9.44e-59 192
Msa1305500 AT4G27410.3 40.316 253 121 5 4 237 13 254 9.91e-59 192
Msa1305500 AT1G12260.1 54.545 154 67 1 5 155 7 160 1.05e-58 194
Msa1305500 AT4G10350.1 59.211 152 57 2 5 151 9 160 1.80e-58 192
Msa1305500 AT3G15500.1 55.769 156 67 1 4 157 13 168 9.41e-58 189
Msa1305500 AT5G04410.1 58.170 153 60 2 4 152 8 160 9.88e-58 196
Msa1305500 AT3G03200.1 55.625 160 66 2 5 159 6 165 2.01e-57 193
Msa1305500 AT1G01720.1 45.022 231 95 6 5 206 7 234 2.55e-57 187
Msa1305500 AT1G52890.1 56.129 155 66 1 5 157 14 168 3.48e-57 187
Msa1305500 AT1G62700.1 54.545 154 67 1 5 155 7 160 3.85e-57 190
Msa1305500 AT1G62700.2 54.545 154 67 1 5 155 7 160 3.85e-57 190
Msa1305500 AT2G18060.3 54.305 151 66 1 4 151 8 158 5.02e-57 189
Msa1305500 AT2G18060.1 54.305 151 66 1 4 151 8 158 5.02e-57 189
Msa1305500 AT4G36160.1 50.932 161 76 1 4 161 9 169 1.58e-56 188
Msa1305500 AT4G36160.3 50.932 161 76 1 4 161 9 169 1.58e-56 188
Msa1305500 AT4G36160.2 50.932 161 76 1 4 161 13 173 1.98e-56 187
Msa1305500 AT5G17260.1 54.658 161 68 2 4 159 5 165 3.59e-56 189
Msa1305500 AT1G65910.1 54.375 160 69 2 5 160 6 165 4.17e-56 192
Msa1305500 AT3G17730.1 55.921 152 63 2 4 151 5 156 4.88e-56 182
Msa1305500 AT5G66300.1 52.469 162 71 3 4 159 11 172 9.09e-56 183
Msa1305500 AT5G08790.1 46.119 219 90 7 2 203 4 211 2.15e-55 182
Msa1305500 AT5G61430.2 76.852 108 21 2 54 157 2 109 2.33e-55 182
Msa1305500 AT1G69490.1 48.901 182 85 2 5 178 9 190 5.78e-55 181
Msa1305500 AT1G61110.1 51.176 170 67 3 4 158 15 183 1.40e-54 181
Msa1305500 AT2G46770.1 50.595 168 65 4 2 151 13 180 1.45e-54 182
Msa1305500 AT3G61910.1 49.405 168 67 2 2 151 8 175 2.16e-54 181
Msa1305500 AT4G28530.1 53.614 166 57 3 5 152 10 173 2.27e-53 179
Msa1305500 AT1G33060.2 52.500 160 72 2 3 158 22 181 5.97e-53 184
Msa1305500 AT1G33060.1 52.500 160 72 2 3 158 22 181 6.15e-53 184
Msa1305500 AT1G77450.1 52.532 158 69 2 5 157 10 166 1.06e-52 174
Msa1305500 AT5G63790.1 48.619 181 81 3 2 173 47 224 1.11e-52 176
Msa1305500 AT1G54330.1 53.846 156 69 2 4 157 5 159 1.37e-52 175
Msa1305500 AT1G79580.3 54.305 151 64 3 5 151 17 166 1.37e-52 177
Msa1305500 AT1G79580.5 54.305 151 64 3 5 151 17 166 1.37e-52 177
Msa1305500 AT1G79580.4 54.305 151 64 3 5 151 17 166 1.37e-52 177
Msa1305500 AT1G79580.2 54.305 151 64 3 5 151 17 166 1.37e-52 177
Msa1305500 AT1G79580.1 54.305 151 64 3 5 151 17 166 1.37e-52 177
Msa1305500 AT5G63790.2 48.619 181 81 3 2 173 57 234 1.46e-52 176
Msa1305500 AT3G15510.1 52.147 163 63 3 9 156 21 183 1.97e-52 177
Msa1305500 AT4G35580.1 45.540 213 97 7 3 201 7 214 2.25e-52 180
Msa1305500 AT4G35580.3 45.540 213 97 7 3 201 7 214 3.56e-52 180
Msa1305500 AT4G35580.2 45.540 213 97 7 3 201 7 214 4.01e-52 180
Msa1305500 AT2G33480.2 53.333 150 67 1 5 154 15 161 1.35e-51 172
Msa1305500 AT5G46590.1 52.941 153 66 3 5 151 6 158 1.41e-51 172
Msa1305500 AT1G32770.1 48.485 165 70 2 2 151 13 177 5.61e-51 173
Msa1305500 AT3G10490.1 52.941 153 67 2 4 151 26 178 1.12e-50 168
Msa1305500 AT2G33480.1 52.632 152 67 2 5 154 15 163 2.05e-50 169
Msa1305500 AT3G10480.1 54.248 153 65 2 4 151 26 178 5.55e-50 172
Msa1305500 AT5G46590.2 57.364 129 52 2 5 130 6 134 6.23e-50 168
Msa1305500 AT3G10490.2 52.941 153 67 2 4 151 26 178 8.15e-50 172
Msa1305500 AT5G13180.1 50.641 156 71 3 5 157 14 166 1.37e-49 166
Msa1305500 AT4G17980.1 52.258 155 66 4 5 151 6 160 2.47e-49 166
Msa1305500 AT4G17980.2 52.258 155 66 4 5 151 6 160 3.66e-49 166
Msa1305500 AT3G10480.2 54.248 153 64 3 4 151 26 177 8.32e-49 169
Msa1305500 AT1G52880.1 52.795 161 62 3 9 155 21 181 2.54e-47 162
Msa1305500 AT1G26870.1 43.979 191 90 5 1 174 12 202 4.52e-47 164
Msa1305500 AT5G39820.1 42.105 190 83 4 7 169 22 211 9.04e-47 161
Msa1305500 AT2G02450.1 49.315 146 73 1 7 151 53 198 1.05e-46 162
Msa1305500 AT2G02450.2 49.315 146 73 1 7 151 53 198 1.32e-46 163
Msa1305500 AT2G43000.1 45.161 155 82 1 7 158 20 174 3.57e-46 158
Msa1305500 AT5G64060.1 46.711 152 77 2 4 151 5 156 1.68e-45 158
Msa1305500 AT1G34180.3 46.452 155 79 2 7 157 18 172 4.82e-45 159
Msa1305500 AT5G09330.5 49.007 151 73 2 5 151 6 156 9.66e-45 159
Msa1305500 AT5G09330.2 49.007 151 73 2 5 151 6 156 9.66e-45 159
Msa1305500 AT5G09330.4 49.007 151 73 2 5 151 6 156 9.66e-45 159
Msa1305500 AT5G09330.3 49.007 151 73 2 5 151 6 156 9.66e-45 159
Msa1305500 AT5G09330.1 49.007 151 73 2 5 151 6 156 9.66e-45 159
Msa1305500 AT1G34190.1 46.452 155 79 2 7 157 18 172 1.45e-44 160
Msa1305500 AT1G56010.1 64.078 103 32 1 54 151 2 104 1.97e-44 153
Msa1305500 AT3G10480.3 44.624 186 65 2 4 151 26 211 2.13e-44 159
Msa1305500 AT1G34180.1 46.452 155 79 2 7 157 18 172 2.82e-44 159
Msa1305500 AT5G24590.2 39.604 202 114 4 4 197 12 213 5.17e-44 157
Msa1305500 AT3G49530.2 38.605 215 111 5 3 212 11 209 1.78e-43 154
Msa1305500 AT3G49530.1 38.605 215 111 5 3 212 11 209 5.98e-43 154
Msa1305500 AT1G34180.4 43.114 167 79 2 7 157 18 184 7.03e-43 154
Msa1305500 AT2G17040.1 39.572 187 100 4 7 183 8 191 1.03e-42 149
Msa1305500 AT2G27300.1 48.276 145 69 2 5 148 14 153 2.86e-42 149
Msa1305500 AT1G34180.2 43.114 167 79 2 7 157 18 184 3.71e-42 154
Msa1305500 AT1G32510.1 45.455 165 78 3 5 157 6 170 6.14e-42 147
Msa1305500 AT3G12977.2 64.356 101 33 2 54 151 14 114 1.61e-41 144
Msa1305500 AT3G12910.1 42.941 170 77 5 7 157 23 191 7.55e-40 142
Msa1305500 AT1G32870.2 49.057 159 73 3 5 157 10 166 1.01e-39 146
Msa1305500 AT1G32870.1 49.057 159 73 3 5 157 10 166 1.06e-39 146
Msa1305500 AT1G32870.3 49.057 159 73 3 5 157 46 202 2.28e-39 146
Msa1305500 AT3G44290.2 42.767 159 80 3 7 159 16 169 4.09e-39 138
Msa1305500 AT5G22290.1 32.432 259 145 6 7 239 23 277 4.69e-39 141
Msa1305500 AT3G44290.1 42.767 159 80 3 7 159 16 169 1.26e-38 140
Msa1305500 AT4G10350.2 61.000 100 37 1 54 151 14 113 2.81e-36 132
Msa1305500 AT5G04395.1 45.517 145 63 2 2 130 25 169 4.28e-36 129
Msa1305500 AT4G28530.2 50.781 128 45 2 5 114 10 137 8.99e-33 124
Msa1305500 AT2G33480.3 55.556 99 42 1 58 154 8 106 9.53e-31 115
Msa1305500 AT1G02230.1 37.915 211 116 8 6 207 4 208 3.63e-29 115
Msa1305500 AT3G44350.2 37.576 165 94 5 1 156 1 165 2.03e-28 110
Msa1305500 AT3G04420.2 39.474 152 81 4 6 151 4 150 2.03e-28 112
Msa1305500 AT5G64530.1 34.884 172 82 4 4 157 2 161 3.96e-28 108
Msa1305500 AT3G04420.1 39.474 152 81 4 6 151 4 150 8.40e-28 111
Msa1305500 AT4G01520.1 40.909 154 81 6 6 152 5 155 2.02e-27 109
Msa1305500 AT4G01540.4 36.612 183 103 7 8 183 7 183 3.00e-26 107
Msa1305500 AT5G64530.2 41.221 131 63 3 4 132 2 120 3.30e-26 102
Msa1305500 AT4G01540.3 40.789 152 80 6 8 152 7 155 4.30e-26 107
Msa1305500 AT4G01540.2 36.612 183 103 7 8 183 7 183 4.75e-26 107
Msa1305500 AT4G01540.1 40.789 152 80 6 8 152 7 155 5.42e-26 108
Msa1305500 AT5G22380.1 36.527 167 95 5 1 156 1 167 6.86e-26 103
Msa1305500 AT3G44350.1 40.741 135 74 4 1 129 1 135 1.32e-25 100
Msa1305500 AT4G01550.1 38.667 150 83 5 8 151 7 153 4.81e-24 102
Msa1305500 AT3G10490.4 59.740 77 28 1 78 151 2 78 6.12e-24 100
Msa1305500 AT3G10490.3 59.740 77 28 1 78 151 2 78 6.12e-24 100
Msa1305500 AT2G18060.2 56.522 69 30 0 83 151 2 70 3.02e-23 97.4
Msa1305500 AT1G02250.1 41.538 130 66 4 6 128 4 130 7.47e-23 97.8
Msa1305500 AT1G02220.1 40.945 127 68 3 6 128 4 127 9.26e-23 98.2
Msa1305500 AT1G01010.1 38.037 163 76 8 1 148 1 153 3.29e-22 97.1
Msa1305500 AT5G14000.1 34.161 161 101 3 4 162 14 171 3.25e-20 87.4
Msa1305500 AT2G43000.2 40.625 96 54 1 66 158 1 96 6.22e-20 86.7
Msa1305500 AT5G14000.2 36.434 129 78 2 4 130 14 140 2.01e-18 81.3
Msa1305500 AT3G56530.1 30.405 148 100 2 5 149 52 199 7.90e-18 83.2
Msa1305500 AT5G50820.1 36.090 133 69 5 4 130 16 138 2.48e-17 79.3
Msa1305500 AT5G22290.2 40.230 87 43 2 84 165 2 84 1.41e-15 75.5
Msa1305500 AT3G55210.1 30.357 168 97 7 5 156 11 174 1.01e-14 73.6
Msa1305500 AT3G04430.1 35.878 131 70 5 11 128 6 135 1.41e-13 68.9
Msa1305500 AT5G14490.1 26.210 248 150 8 5 223 58 301 2.84e-13 70.1
Msa1305500 AT5G14490.4 26.210 248 150 8 5 223 55 298 2.90e-13 70.1
Msa1305500 AT5G14490.3 26.210 248 150 8 5 223 58 301 3.46e-13 70.1
Msa1305500 AT1G25580.1 32.353 170 91 8 4 160 57 215 3.47e-13 70.5
Msa1305500 AT4G29230.1 31.892 185 93 8 5 164 48 224 3.76e-13 70.5
Msa1305500 AT4G29230.2 31.892 185 93 8 5 164 47 223 4.04e-13 70.5
Msa1305500 AT4G29230.3 31.892 185 93 8 5 164 48 224 4.21e-13 70.1
Msa1305500 AT1G28470.1 31.148 183 97 8 4 167 76 248 4.48e-13 69.3
Msa1305500 AT5G14490.2 31.944 144 80 4 4 130 54 196 5.49e-13 68.6
Msa1305500 AT5G56620.2 31.609 174 87 7 4 149 42 211 2.62e-12 67.8
Msa1305500 AT5G56620.3 31.792 173 86 7 5 149 43 211 2.71e-12 67.8
Msa1305500 AT5G56620.1 29.500 200 109 7 4 175 42 237 3.55e-12 67.0

Find 67 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATTTACTGAAATATTATT+TGG 0.156112 8_3:-68964336 None:intergenic
ACAAGAGCAACCATTCAATT+TGG 0.264812 8_3:+68964554 Msa1305500:CDS
ACCTCAATAGTGAATGAATT+TGG 0.270479 8_3:+68964120 Msa1305500:CDS
ACCAATCGAGCCACTGAATC+AGG 0.295623 8_3:+68963070 Msa1305500:CDS
CATTCAATTTGGACTCCATT+TGG 0.322744 8_3:+68964565 Msa1305500:CDS
GTTGTGTCACATGGAGATTC+TGG 0.325153 8_3:-68964099 None:intergenic
CAAGGGGTGAGAAAAGTAAT+TGG 0.333069 8_3:+68963188 Msa1305500:CDS
TGTGAACCTTGGGACCTTCC+AGG 0.334984 8_3:+68962114 Msa1305500:CDS
GTTGAGCTTCCAAATCTAAA+TGG 0.337493 8_3:+68964147 Msa1305500:CDS
AGGATGAATGGGTGGTTTGT+AGG 0.337985 8_3:+68964022 Msa1305500:intron
ACATGAATTTGACAATGAAT+TGG 0.349230 8_3:+68964262 Msa1305500:CDS
TTTGTAATACCATTTAGATT+TGG 0.362526 8_3:-68964156 None:intergenic
AATATTTCGTGGTGGAGTTT+TGG 0.365969 8_3:+68963123 Msa1305500:CDS
TTCTAAAAGCATTGCAACTT+AGG 0.375801 8_3:+68964364 Msa1305500:CDS
TTTGGATTAAGCAAGTTAGA+AGG 0.390098 8_3:-68964318 None:intergenic
GGATGAATGGGTGGTTTGTA+GGG 0.397208 8_3:+68964023 Msa1305500:intron
ATCAACAACTGCAACAGCTT+TGG 0.405014 8_3:-68962082 None:intergenic
ACCAAATTCATTCACTATTG+AGG 0.421602 8_3:-68964121 None:intergenic
CCCTGATTCAGTGGCTCGAT+TGG 0.425214 8_3:-68963071 None:intergenic
TCATACAGGTAAGGCTTCAA+TGG 0.427731 8_3:+68962988 Msa1305500:intron
ACTCCTTGTTGAGGCATGTA+TGG 0.449948 8_3:-68964435 None:intergenic
CTTTAAACAACTTCACCAAA+TGG 0.452085 8_3:-68964580 None:intergenic
CATACAGGTAAGGCTTCAAT+GGG 0.463734 8_3:+68962989 Msa1305500:intron
GAGCCACTGAATCAGGGTAT+TGG 0.473159 8_3:+68963077 Msa1305500:CDS
AGAGATAGAAAATATCCAAC+TGG 0.474047 8_3:+68963040 Msa1305500:CDS
TACTTAGATCAGTTCCAAGT+TGG 0.477373 8_3:-68964470 None:intergenic
TTATAAGGGTAGGGCTCCAA+GGG 0.492314 8_3:+68963171 Msa1305500:CDS
GTGATGAGTTCTTCATCTGT+TGG 0.493082 8_3:-68962018 None:intergenic
CAAATGGAGTCCAAATTGAA+TGG 0.497221 8_3:-68964564 None:intergenic
TCTCAACAAGTGTGAACCTT+GGG 0.498360 8_3:+68962104 Msa1305500:CDS
GGATTCACCAACATTATTCA+AGG 0.498909 8_3:+68964195 Msa1305500:CDS
CCCTACCCTTATAAAACACT+AGG 0.512291 8_3:-68963162 None:intergenic
AAGGGGTGAGAAAAGTAATT+GGG 0.515394 8_3:+68963189 Msa1305500:CDS
GAAAACCACTGGAAAAGATA+AGG 0.516873 8_3:+68963099 Msa1305500:CDS
TTTATAAGGGTAGGGCTCCA+AGG 0.519624 8_3:+68963170 Msa1305500:CDS
GGTTGCTCTTGTTGATGCTG+TGG 0.527873 8_3:-68964543 None:intergenic
TCAGGGTATTGGAAAACCAC+TGG 0.536184 8_3:+68963088 Msa1305500:CDS
ACTATTGAGGTTGTGTCACA+TGG 0.536553 8_3:-68964108 None:intergenic
TTTCCAATACCCTGATTCAG+TGG 0.541052 8_3:-68963080 None:intergenic
TGCAACAGCTTTGGATGTGA+AGG 0.542646 8_3:-68962073 None:intergenic
ATGGAGGAAAATCTACCTCC+TGG 0.544862 8_3:+68961982 Msa1305500:CDS
AAAGATAAGGAAATATTTCG+TGG 0.545961 8_3:+68963112 Msa1305500:CDS
TTAGAAGGCCATGGTAGAGA+TGG 0.548422 8_3:-68964303 None:intergenic
TGTTTGTCCTTGAATAATGT+TGG 0.550492 8_3:-68964202 None:intergenic
TTACCTTTGAAGTTCGAAAG+TGG 0.550555 8_3:-68963243 None:intergenic
TGGGAAAATGATGTTTGTTG+TGG 0.550859 8_3:-68964075 None:intergenic
ACACCACTTTCGAACTTCAA+AGG 0.552288 8_3:+68963240 Msa1305500:CDS
GTCACATGGAGATTCTGGTT+GGG 0.559177 8_3:-68964094 None:intergenic
GTAATATCTCATCACCAACT+TGG 0.564072 8_3:+68964456 Msa1305500:CDS
CGATTGGTTCTAAGTCCAGT+TGG 0.570705 8_3:-68963055 None:intergenic
ATCTCAACAAGTGTGAACCT+TGG 0.575709 8_3:+68962103 Msa1305500:CDS
GATGGAACATGACTTGAAGA+TGG 0.579781 8_3:-68964285 None:intergenic
AAATAACCTGGAAGGTCCCA+AGG 0.580335 8_3:-68962120 None:intergenic
TGTCACATGGAGATTCTGGT+TGG 0.585895 8_3:-68964095 None:intergenic
CCTACCCTTATAAAACACTA+GGG 0.590419 8_3:-68963161 None:intergenic
TTAAGCAAGTTAGAAGGCCA+TGG 0.601623 8_3:-68964312 None:intergenic
ACAAATTCATCATCTTCATG+TGG 0.605409 8_3:+68964174 Msa1305500:CDS
CCAATCGAGCCACTGAATCA+GGG 0.616010 8_3:+68963071 Msa1305500:CDS
TGAGATATTACTCCTTGTTG+AGG 0.618801 8_3:-68964444 None:intergenic
GCACCATACATGCCTCAACA+AGG 0.631430 8_3:+68964432 Msa1305500:CDS
TACAGGTAAGGCTTCAATGG+GGG 0.647295 8_3:+68962991 Msa1305500:intron
GTCATGTTCCATCTCTACCA+TGG 0.649805 8_3:+68964295 Msa1305500:CDS
GATAAGGAAATATTTCGTGG+TGG 0.655075 8_3:+68963115 Msa1305500:CDS
GTTGGATGAAACCTAAAACC+AGG 0.669523 8_3:-68962000 None:intergenic
TATAAGGGTAGGGCTCCAAG+GGG 0.710910 8_3:+68963172 Msa1305500:CDS
GGATGAAACCTAAAACCAGG+AGG 0.726374 8_3:-68961997 None:intergenic
ATACAGGTAAGGCTTCAATG+GGG 0.739241 8_3:+68962990 Msa1305500:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAATTTTATTTTTCTTTG+AGG + chr8_3:68962531-68962550 Msa1305500:intron 10.0%
!!! AACTCTTTAAAAAAAATTAA+TGG + chr8_3:68962792-68962811 Msa1305500:intron 10.0%
!!! TAGTAATCATATAATTTTTA+TGG - chr8_3:68963468-68963487 None:intergenic 10.0%
!!! GATGCAATTTTTTTTTTTTT+TGG + chr8_3:68962259-68962278 Msa1305500:intron 15.0%
!!! TTTTGGAAATTATTATTAGA+AGG + chr8_3:68962276-68962295 Msa1305500:intron 15.0%
!!! TATTTTGAAAATTAGTTACA+TGG - chr8_3:68962736-68962755 None:intergenic 15.0%
!! CACAAATTCAAAATATATTA+TGG + chr8_3:68962763-68962782 Msa1305500:intron 15.0%
!! CTAAGAAAATATTAAAACAT+GGG - chr8_3:68963290-68963309 None:intergenic 15.0%
!! ACTAAGAAAATATTAAAACA+TGG - chr8_3:68963291-68963310 None:intergenic 15.0%
!!! TTAGTATAGTATTATTTTGT+TGG + chr8_3:68963352-68963371 Msa1305500:intron 15.0%
!!! ATTTTTATGGAAAGTTTTTA+AGG - chr8_3:68963455-68963474 None:intergenic 15.0%
!! AAACTATTTACTTATTAACA+AGG - chr8_3:68963842-68963861 None:intergenic 15.0%
!! AAAATACTAGATTTCATATA+TGG + chr8_3:68963971-68963990 Msa1305500:intron 15.0%
!! GAATTTACTGAAATATTATT+TGG - chr8_3:68964339-68964358 None:intergenic 15.0%
!! ATATAGACAAATTAAGAGAA+AGG - chr8_3:68962418-68962437 None:intergenic 20.0%
!!! AGCTTTTGTATATATTGATT+TGG + chr8_3:68962565-68962584 Msa1305500:intron 20.0%
!!! GCTTTTGTATATATTGATTT+GGG + chr8_3:68962566-68962585 Msa1305500:intron 20.0%
!!! GTTATTTTCAAAGTAAGAAT+GGG - chr8_3:68962704-68962723 None:intergenic 20.0%
!! TAACAAAAGTTGACATTAAT+TGG + chr8_3:68962828-68962847 Msa1305500:intron 20.0%
!! AATAATTAATCATGTTTGTG+TGG + chr8_3:68962957-68962976 Msa1305500:intron 20.0%
!!! AACTCATTTTAGTTTTTACA+AGG + chr8_3:68963318-68963337 Msa1305500:intron 20.0%
!!! GAATATTTTGATTACTATGT+TGG + chr8_3:68963753-68963772 Msa1305500:intron 20.0%
!! TTTGTAATACCATTTAGATT+TGG - chr8_3:68964159-68964178 None:intergenic 20.0%
! AGATATGAACAAAAATAACC+TGG - chr8_3:68962135-68962154 None:intergenic 25.0%
!! TGTTTGATTGTAGATTTTCA+AGG + chr8_3:68962203-68962222 Msa1305500:intron 25.0%
! TCGACTAAACTTAATTTAGA+AGG + chr8_3:68962237-68962256 Msa1305500:intron 25.0%
!!! GGTTATTTTCAAAGTAAGAA+TGG - chr8_3:68962705-68962724 None:intergenic 25.0%
! AAAGATAAGGAAATATTTCG+TGG + chr8_3:68963112-68963131 Msa1305500:CDS 25.0%
!! AAAACCCTAGTGTTTTATAA+GGG + chr8_3:68963157-68963176 Msa1305500:CDS 25.0%
!!! GTATAGTATTATTTTGTTGG+TGG + chr8_3:68963355-68963374 Msa1305500:intron 25.0%
!!! TTATGGAAAGTTTTTAAGGA+TGG - chr8_3:68963451-68963470 None:intergenic 25.0%
! AAAAAAGTTACGAGACTTTA+TGG + chr8_3:68963582-68963601 Msa1305500:intron 25.0%
!!! TTAATAGTCGATTTTCTCTT+TGG + chr8_3:68963907-68963926 Msa1305500:intron 25.0%
!! TAACATTTTGCAATTTTTGC+AGG + chr8_3:68964002-68964021 Msa1305500:intron 25.0%
!! TTTTTGTTGATATGCTCTTT+TGG - chr8_3:68964053-68964072 None:intergenic 25.0%
! ACATGAATTTGACAATGAAT+TGG + chr8_3:68964262-68964281 Msa1305500:CDS 25.0%
ATGAACAAAAATAACCTGGA+AGG - chr8_3:68962131-68962150 None:intergenic 30.0%
ACCAATAATCAACAAAGTCT+TGG + chr8_3:68962631-68962650 Msa1305500:intron 30.0%
! ACCAAGACTTTGTTGATTAT+TGG - chr8_3:68962635-68962654 None:intergenic 30.0%
ATTAGTTACATGGTGTACTT+AGG - chr8_3:68962726-68962745 None:intergenic 30.0%
GTGTATAATTCATACAGGTA+AGG + chr8_3:68962979-68962998 Msa1305500:intron 30.0%
AGAGATAGAAAATATCCAAC+TGG + chr8_3:68963040-68963059 Msa1305500:CDS 30.0%
! TATTTCCTTATCTTTTCCAG+TGG - chr8_3:68963107-68963126 None:intergenic 30.0%
! GAAAACCCTAGTGTTTTATA+AGG + chr8_3:68963156-68963175 Msa1305500:CDS 30.0%
!! TAGTATTATTTTGTTGGTGG+TGG + chr8_3:68963358-68963377 Msa1305500:intron 30.0%
!! AAGTTTTTAAGGATGGCTTA+TGG - chr8_3:68963444-68963463 None:intergenic 30.0%
! TTGTCTTGCATTTTCGAAAA+CGG - chr8_3:68963879-68963898 None:intergenic 30.0%
ACCTCAATAGTGAATGAATT+TGG + chr8_3:68964120-68964139 Msa1305500:CDS 30.0%
ACCAAATTCATTCACTATTG+AGG - chr8_3:68964124-68964143 None:intergenic 30.0%
ACAAATTCATCATCTTCATG+TGG + chr8_3:68964174-68964193 Msa1305500:CDS 30.0%
TGTTTGTCCTTGAATAATGT+TGG - chr8_3:68964205-68964224 None:intergenic 30.0%
TTTGGATTAAGCAAGTTAGA+AGG - chr8_3:68964321-68964340 None:intergenic 30.0%
!! TTCTAAAAGCATTGCAACTT+AGG + chr8_3:68964364-68964383 Msa1305500:CDS 30.0%
!! AAAATCTACCTCCTGGTTTT+AGG + chr8_3:68961989-68962008 Msa1305500:CDS 35.0%
GTGTGGTGTATAATTCATAC+AGG + chr8_3:68962974-68962993 Msa1305500:intron 35.0%
GAAAACCACTGGAAAAGATA+AGG + chr8_3:68963099-68963118 Msa1305500:CDS 35.0%
GATAAGGAAATATTTCGTGG+TGG + chr8_3:68963115-68963134 Msa1305500:CDS 35.0%
!! AATATTTCGTGGTGGAGTTT+TGG + chr8_3:68963123-68963142 Msa1305500:CDS 35.0%
CCTACCCTTATAAAACACTA+GGG - chr8_3:68963164-68963183 None:intergenic 35.0%
! CCTAGTGTTTTATAAGGGTA+GGG + chr8_3:68963162-68963181 Msa1305500:CDS 35.0%
AAGGGGTGAGAAAAGTAATT+GGG + chr8_3:68963189-68963208 Msa1305500:CDS 35.0%
!! TTACCTTTGAAGTTCGAAAG+TGG - chr8_3:68963246-68963265 None:intergenic 35.0%
TTTAAGGATGGCTTATGGTT+GGG - chr8_3:68963439-68963458 None:intergenic 35.0%
!! TTTTAAGGATGGCTTATGGT+TGG - chr8_3:68963440-68963459 None:intergenic 35.0%
! TGCAATTTTTGCAGGATGAA+TGG + chr8_3:68964010-68964029 Msa1305500:intron 35.0%
! GCAATTTTTGCAGGATGAAT+GGG + chr8_3:68964011-68964030 Msa1305500:intron 35.0%
! TGGGAAAATGATGTTTGTTG+TGG - chr8_3:68964078-68964097 None:intergenic 35.0%
GTTGAGCTTCCAAATCTAAA+TGG + chr8_3:68964147-68964166 Msa1305500:CDS 35.0%
GGATTCACCAACATTATTCA+AGG + chr8_3:68964195-68964214 Msa1305500:CDS 35.0%
TGAGATATTACTCCTTGTTG+AGG - chr8_3:68964447-68964466 None:intergenic 35.0%
GTAATATCTCATCACCAACT+TGG + chr8_3:68964456-68964475 Msa1305500:CDS 35.0%
TACTTAGATCAGTTCCAAGT+TGG - chr8_3:68964473-68964492 None:intergenic 35.0%
ACAAGAGCAACCATTCAATT+TGG + chr8_3:68964554-68964573 Msa1305500:CDS 35.0%
CAAATGGAGTCCAAATTGAA+TGG - chr8_3:68964567-68964586 None:intergenic 35.0%
CATTCAATTTGGACTCCATT+TGG + chr8_3:68964565-68964584 Msa1305500:CDS 35.0%
GTTGGATGAAACCTAAAACC+AGG - chr8_3:68962003-68962022 None:intergenic 40.0%
GTGATGAGTTCTTCATCTGT+TGG - chr8_3:68962021-68962040 None:intergenic 40.0%
ATCAACAACTGCAACAGCTT+TGG - chr8_3:68962085-68962104 None:intergenic 40.0%
ATCTCAACAAGTGTGAACCT+TGG + chr8_3:68962103-68962122 Msa1305500:CDS 40.0%
TCTCAACAAGTGTGAACCTT+GGG + chr8_3:68962104-68962123 Msa1305500:CDS 40.0%
TCATACAGGTAAGGCTTCAA+TGG + chr8_3:68962988-68963007 Msa1305500:intron 40.0%
CATACAGGTAAGGCTTCAAT+GGG + chr8_3:68962989-68963008 Msa1305500:intron 40.0%
ATACAGGTAAGGCTTCAATG+GGG + chr8_3:68962990-68963009 Msa1305500:intron 40.0%
TTTCCAATACCCTGATTCAG+TGG - chr8_3:68963083-68963102 None:intergenic 40.0%
! CCCTAGTGTTTTATAAGGGT+AGG + chr8_3:68963161-68963180 Msa1305500:CDS 40.0%
CCCTACCCTTATAAAACACT+AGG - chr8_3:68963165-68963184 None:intergenic 40.0%
!! CAATTACTTTTCTCACCCCT+TGG - chr8_3:68963190-68963209 None:intergenic 40.0%
CAAGGGGTGAGAAAAGTAAT+TGG + chr8_3:68963188-68963207 Msa1305500:CDS 40.0%
ACACCACTTTCGAACTTCAA+AGG + chr8_3:68963240-68963259 Msa1305500:CDS 40.0%
ATCACTAAATCAGACGCTAG+AGG + chr8_3:68963725-68963744 Msa1305500:intron 40.0%
! ATTTTTGCAGGATGAATGGG+TGG + chr8_3:68964014-68964033 Msa1305500:intron 40.0%
ACTATTGAGGTTGTGTCACA+TGG - chr8_3:68964111-68964130 None:intergenic 40.0%
GATGGAACATGACTTGAAGA+TGG - chr8_3:68964288-68964307 None:intergenic 40.0%
TTAAGCAAGTTAGAAGGCCA+TGG - chr8_3:68964315-68964334 None:intergenic 40.0%
ATGGAGGAAAATCTACCTCC+TGG + chr8_3:68961982-68962001 Msa1305500:CDS 45.0%
GGATGAAACCTAAAACCAGG+AGG - chr8_3:68962000-68962019 None:intergenic 45.0%
!! TGCAACAGCTTTGGATGTGA+AGG - chr8_3:68962076-68962095 None:intergenic 45.0%
AAATAACCTGGAAGGTCCCA+AGG - chr8_3:68962123-68962142 None:intergenic 45.0%
TACAGGTAAGGCTTCAATGG+GGG + chr8_3:68962991-68963010 Msa1305500:intron 45.0%
!! CGATTGGTTCTAAGTCCAGT+TGG - chr8_3:68963058-68963077 None:intergenic 45.0%
!! TCAGGGTATTGGAAAACCAC+TGG + chr8_3:68963088-68963107 Msa1305500:CDS 45.0%
!! TTTCGTGGTGGAGTTTTGGT+AGG + chr8_3:68963127-68963146 Msa1305500:CDS 45.0%
TTTATAAGGGTAGGGCTCCA+AGG + chr8_3:68963170-68963189 Msa1305500:CDS 45.0%
TTATAAGGGTAGGGCTCCAA+GGG + chr8_3:68963171-68963190 Msa1305500:CDS 45.0%
GATGGCTTATGGTTGGGTAA+AGG - chr8_3:68963433-68963452 None:intergenic 45.0%
! AGGATGAATGGGTGGTTTGT+AGG + chr8_3:68964022-68964041 Msa1305500:intron 45.0%
! GGATGAATGGGTGGTTTGTA+GGG + chr8_3:68964023-68964042 Msa1305500:intron 45.0%
! GTCACATGGAGATTCTGGTT+GGG - chr8_3:68964097-68964116 None:intergenic 45.0%
TGTCACATGGAGATTCTGGT+TGG - chr8_3:68964098-68964117 None:intergenic 45.0%
GTTGTGTCACATGGAGATTC+TGG - chr8_3:68964102-68964121 None:intergenic 45.0%
GTCATGTTCCATCTCTACCA+TGG + chr8_3:68964295-68964314 Msa1305500:CDS 45.0%
TTAGAAGGCCATGGTAGAGA+TGG - chr8_3:68964306-68964325 None:intergenic 45.0%
ACTCCTTGTTGAGGCATGTA+TGG - chr8_3:68964438-68964457 None:intergenic 45.0%
!! TATATATATAACAAAAAAAA+GGG - chr8_3:68962176-68962195 None:intergenic 5.0%
!! ATATATATATAACAAAAAAA+AGG - chr8_3:68962177-68962196 None:intergenic 5.0%
!!! AATATTATTAATTACTTTTT+TGG + chr8_3:68962374-68962393 Msa1305500:intron 5.0%
!! TTTATATATAAGTTATTAAT+TGG - chr8_3:68962486-68962505 None:intergenic 5.0%
!!! TTATATATAAGTTTTTTTTT+GGG - chr8_3:68962514-68962533 None:intergenic 5.0%
!!! TTTATATATAAGTTTTTTTT+TGG - chr8_3:68962515-68962534 None:intergenic 5.0%
!! AAAACTATAAAAATTAATTA+TGG - chr8_3:68963513-68963532 None:intergenic 5.0%
!!! TATTTTTTTAAAATAATGAT+AGG - chr8_3:68963785-68963804 None:intergenic 5.0%
!!! TTAACATAATTTTTTTTAAA+TGG + chr8_3:68963942-68963961 Msa1305500:intron 5.0%
TAAGGCTTCAATGGGGGAGA+AGG + chr8_3:68962997-68963016 Msa1305500:CDS 50.0%
CTTCAATGGGGGAGAAGGAA+TGG + chr8_3:68963002-68963021 Msa1305500:CDS 50.0%
ACCAATCGAGCCACTGAATC+AGG + chr8_3:68963070-68963089 Msa1305500:CDS 50.0%
CCAATCGAGCCACTGAATCA+GGG + chr8_3:68963071-68963090 Msa1305500:CDS 50.0%
GAGCCACTGAATCAGGGTAT+TGG + chr8_3:68963077-68963096 Msa1305500:CDS 50.0%
TATAAGGGTAGGGCTCCAAG+GGG + chr8_3:68963172-68963191 Msa1305500:CDS 50.0%
GCACCATACATGCCTCAACA+AGG + chr8_3:68964432-68964451 Msa1305500:CDS 50.0%
GGTTGCTCTTGTTGATGCTG+TGG - chr8_3:68964546-68964565 None:intergenic 50.0%
TGTGAACCTTGGGACCTTCC+AGG + chr8_3:68962114-68962133 Msa1305500:CDS 55.0%
CCCTGATTCAGTGGCTCGAT+TGG - chr8_3:68963074-68963093 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 68961982 68964590 68961982 ID=Msa1305500;Name=Msa1305500
chr8_3 mRNA 68961982 68964590 68961982 ID=Msa1305500-mRNA-1;Parent=Msa1305500;Name=Msa1305500-mRNA-1;_AED=0.03;_eAED=0.04;_QI=0|0.5|0|1|1|1|3|0|328
chr8_3 exon 68961982 68962135 68961982 ID=Msa1305500-mRNA-1:exon:21358;Parent=Msa1305500-mRNA-1
chr8_3 exon 68962996 68963261 68962996 ID=Msa1305500-mRNA-1:exon:21359;Parent=Msa1305500-mRNA-1
chr8_3 exon 68964024 68964590 68964024 ID=Msa1305500-mRNA-1:exon:21360;Parent=Msa1305500-mRNA-1
chr8_3 CDS 68961982 68962135 68961982 ID=Msa1305500-mRNA-1:cds;Parent=Msa1305500-mRNA-1
chr8_3 CDS 68962996 68963261 68962996 ID=Msa1305500-mRNA-1:cds;Parent=Msa1305500-mRNA-1
chr8_3 CDS 68964024 68964590 68964024 ID=Msa1305500-mRNA-1:cds;Parent=Msa1305500-mRNA-1
Gene Sequence

>Msa1305500

ATGGAGGAAAATCTACCTCCTGGTTTTAGGTTTCATCCAACAGATGAAGAACTCATCACACACTATCTTACAATGAAAATTTCTGATACTTCCTTCACATCCAAAGCTGTTGCAGTTGTTGATCTCAACAAGTGTGAACCTTGGGACCTTCCAGGTAAGGCTTCAATGGGGGAGAAGGAATGGTATTTTTTCAGTGTGAGAGATAGAAAATATCCAACTGGACTTAGAACCAATCGAGCCACTGAATCAGGGTATTGGAAAACCACTGGAAAAGATAAGGAAATATTTCGTGGTGGAGTTTTGGTAGGAATGAAGAAAACCCTAGTGTTTTATAAGGGTAGGGCTCCAAGGGGTGAGAAAAGTAATTGGGTCATGCATGAATATAGACTAGAAAACAAACACCACTTTCGAACTTCAAAGGATGAATGGGTGGTTTGTAGGGTTTTCCAAAAGAGCATATCAACAAAAAAACCACAACAAACATCATTTTCCCAACCAGAATCTCCATGTGACACAACCTCAATAGTGAATGAATTTGGTGACGTTGAGCTTCCAAATCTAAATGGTATTACAAATTCATCATCTTCATGTGGATTCACCAACATTATTCAAGGACAAACATTCAACACTCATGATGATCTCAATAATGTTAACACAAACATGAATTTGACAATGAATTGGCCATCTTCAAGTCATGTTCCATCTCTACCATGGCCTTCTAACTTGCTTAATCCAAATAATATTTCAGTAAATTCATTACTTCTAAAAGCATTGCAACTTAGGAATTATCAACAACAAAGAGAAGTTGCAGCTACAAATACTCATTTTGCACCATACATGCCTCAACAAGGAGTAATATCTCATCACCAACTTGGAACTGATCTAAGTAATAATTCAAATGATCTAAGTGCTTCTTCTTCAAAAGTTTTAGAGTGTATGCCACAGCATCAACAAGAGCAACCATTCAATTTGGACTCCATTTGGTGA
Protein sequence

>Msa1305500

MEENLPPGFRFHPTDEELITHYLTMKISDTSFTSKAVAVVDLNKCEPWDLPGKASMGEKEWYFFSVRDRKYPTGLRTNRATESGYWKTTGKDKEIFRGGVLVGMKKTLVFYKGRAPRGEKSNWVMHEYRLENKHHFRTSKDEWVVCRVFQKSISTKKPQQTSFSQPESPCDTTSIVNEFGDVELPNLNGITNSSSSCGFTNIIQGQTFNTHDDLNNVNTNMNLTMNWPSSSHVPSLPWPSNLLNPNNISVNSLLLKALQLRNYQQQREVAATNTHFAPYMPQQGVISHHQLGTDLSNNSNDLSASSSKVLECMPQHQQEQPFNLDSIW*