Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307100 | XP_003629163.1 | 97.897 | 428 | 8 | 1 | 1 | 427 | 1 | 428 | 0.0 | 872 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307100 | sp|Q96255|SERB1_ARATH | 83.290 | 389 | 59 | 3 | 42 | 427 | 45 | 430 | 0.0 | 689 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307100 | G7L9H1 | 97.897 | 428 | 8 | 1 | 1 | 427 | 1 | 428 | 0.0 | 872 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1307100 | Msa1307640 | 0.890617 | 8.375856e-74 | -8.615850e-47 |
| Msa0326710 | Msa1307100 | 0.804712 | 1.893379e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307100 | MtrunA17_Chr8g0370681 | 97.897 | 428 | 8 | 1 | 1 | 427 | 1 | 428 | 0.0 | 872 |
| Msa1307100 | MtrunA17_Chr4g0018711 | 80.556 | 36 | 7 | 0 | 336 | 371 | 14 | 49 | 2.88e-12 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307100 | AT4G35630.1 | 83.290 | 389 | 59 | 3 | 42 | 427 | 45 | 430 | 0.0 | 689 |
| Msa1307100 | AT2G17630.1 | 79.750 | 400 | 70 | 2 | 28 | 427 | 34 | 422 | 0.0 | 677 |
Find 111 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGTTGATGTTTCGAAATT+TGG | 0.102619 | 8_4:+2340096 | Msa1307100:CDS |
| TGAGGAATGGGTTTGGGTTT+GGG | 0.145925 | 8_4:-2339530 | None:intergenic |
| GAGGAAAGGGTTGTTGGTTT+GGG | 0.154238 | 8_4:-2339401 | None:intergenic |
| TTGGGGCTGGGCTTGGGTTT+GGG | 0.177337 | 8_4:-2339512 | None:intergenic |
| TTTGGGTTTGGGGCTGGGCT+TGG | 0.187617 | 8_4:-2339519 | None:intergenic |
| CTGAGGAATGGGTTTGGGTT+TGG | 0.201319 | 8_4:-2339531 | None:intergenic |
| AATGGGTTTGGGTTTGGGGC+TGG | 0.205539 | 8_4:-2339525 | None:intergenic |
| TTTGGGGCTGGGCTTGGGTT+TGG | 0.206468 | 8_4:-2339513 | None:intergenic |
| ATGGGTTTGGGTTTGGGGCT+GGG | 0.207238 | 8_4:-2339524 | None:intergenic |
| TGAGGAAAGGGTTGTTGGTT+TGG | 0.212992 | 8_4:-2339402 | None:intergenic |
| TGTTGGTTTGGGGCAGGAGA+TGG | 0.264416 | 8_4:-2339390 | None:intergenic |
| TTGGGTTTGGGGCTGGGCTT+GGG | 0.266124 | 8_4:-2339518 | None:intergenic |
| GTTGGAAGGTGAGTTTATTA+AGG | 0.285097 | 8_4:+2340476 | Msa1307100:CDS |
| CTGGGCTTGGGTTTGGGTGG+TGG | 0.289144 | 8_4:-2339506 | None:intergenic |
| TGAAGGTGGGGTTGGTGCGG+AGG | 0.301133 | 8_4:-2339459 | None:intergenic |
| ATTGTAAACCAAACGTGATT+TGG | 0.312678 | 8_4:+2339887 | Msa1307100:CDS |
| GTTGGTTTGGGGCAGGAGAT+GGG | 0.319241 | 8_4:-2339389 | None:intergenic |
| TCAACGGCACCGCCGCGAAC+TGG | 0.322227 | 8_4:-2339783 | None:intergenic |
| GGAAGCTGCTAAGGAGAATA+TGG | 0.343378 | 8_4:+2340497 | Msa1307100:CDS |
| GGCTTGGGTTTGGGTGGTGG+CGG | 0.345622 | 8_4:-2339503 | None:intergenic |
| GGAGAATATGGTTCAGCTTA+AGG | 0.351474 | 8_4:+2340509 | Msa1307100:CDS |
| TTTCGAAACATCAACAGGTT+TGG | 0.365348 | 8_4:-2340091 | None:intergenic |
| CGCGATCTGAGGAATGGGTT+TGG | 0.365463 | 8_4:-2339537 | None:intergenic |
| GGGCTGGGCTTGGGTTTGGG+TGG | 0.366318 | 8_4:-2339509 | None:intergenic |
| TGGGGCAGGAGATGGGTTTG+TGG | 0.371603 | 8_4:-2339382 | None:intergenic |
| TGTTGAGGTGAGTGGGGTGA+TGG | 0.372187 | 8_4:-2339431 | None:intergenic |
| GCGATCTGAGGAATGGGTTT+GGG | 0.375565 | 8_4:-2339536 | None:intergenic |
| CCAAATTTCGAAACATCAAC+AGG | 0.382329 | 8_4:-2340096 | None:intergenic |
| CGCTTTATCGCTCCACGAAC+CGG | 0.392474 | 8_4:-2339845 | None:intergenic |
| GGCGGAGCATTTGATTGAAA+TGG | 0.393103 | 8_4:-2339485 | None:intergenic |
| AAACCAAACGTGATTTGGTC+TGG | 0.403318 | 8_4:+2339892 | Msa1307100:CDS |
| GAGGAATGGGTTTGGGTTTG+GGG | 0.407017 | 8_4:-2339529 | None:intergenic |
| CTCTACAACTGGCGTGGATC+CGG | 0.407304 | 8_4:+2339625 | Msa1307100:CDS |
| ATGCTATTGATGAGAGTAAT+GGG | 0.409801 | 8_4:+2340382 | Msa1307100:CDS |
| GTTTGAAGGTGGGGTTGGTG+CGG | 0.410251 | 8_4:-2339462 | None:intergenic |
| TTCCCAGACCAAATCACGTT+TGG | 0.411453 | 8_4:-2339895 | None:intergenic |
| AATGGGTTTGAAGGTGGGGT+TGG | 0.412650 | 8_4:-2339467 | None:intergenic |
| GTTGAGGTGAGTGGGGTGAT+GGG | 0.416864 | 8_4:-2339430 | None:intergenic |
| GACCTAACAGATTTCTCAAC+AGG | 0.417645 | 8_4:-2340417 | None:intergenic |
| CAGGAGATGGGTTTGTGGTG+AGG | 0.418564 | 8_4:-2339377 | None:intergenic |
| GAGAATATGGTTCAGCTTAA+GGG | 0.419573 | 8_4:+2340510 | Msa1307100:CDS |
| GCTGTTGATTACATCGTTAC+CGG | 0.422181 | 8_4:+2339826 | Msa1307100:CDS |
| CGCGTCTTCAACTTCGCCGC+TGG | 0.423193 | 8_4:+2339556 | Msa1307100:CDS |
| TACAATGCTATGCCTTTAGC+TGG | 0.423970 | 8_4:+2340567 | Msa1307100:CDS |
| TGTGCTAATGAAACAATTCA+TGG | 0.434491 | 8_4:+2339991 | Msa1307100:CDS |
| GGGAGATTGTTGAGGTGAGT+GGG | 0.434637 | 8_4:-2339438 | None:intergenic |
| ATTACATCGTTACCGGTTCG+TGG | 0.435789 | 8_4:+2339833 | Msa1307100:CDS |
| AAGGGTTGTTGGTTTGGGGC+AGG | 0.436660 | 8_4:-2339396 | None:intergenic |
| TGGGATTTACATGTGTGGTT+TGG | 0.438222 | 8_4:+2340281 | Msa1307100:CDS |
| GCGGAGCATTTGATTGAAAT+GGG | 0.439705 | 8_4:-2339484 | None:intergenic |
| CAGAAGAATGTGGGTCCCTC+TGG | 0.442407 | 8_4:+2340138 | Msa1307100:CDS |
| CACTTTGGAGAAATCTGAGT+TGG | 0.443629 | 8_4:+2340458 | Msa1307100:CDS |
| TGTTTCAATTCATCAAAAGA+TGG | 0.444164 | 8_4:-2339940 | None:intergenic |
| GGAACAAGGTGGTTTGGTTG+AGG | 0.445475 | 8_4:+2340320 | Msa1307100:CDS |
| AGGGAGATTGTTGAGGTGAG+TGG | 0.449206 | 8_4:-2339439 | None:intergenic |
| GATGAATGTTCCTTTCACTT+TGG | 0.460026 | 8_4:+2340443 | Msa1307100:CDS |
| ATTGTGAGAAATGATTTGAT+TGG | 0.460613 | 8_4:+2340174 | Msa1307100:CDS |
| AGAGCTCTGATTGGGCTTTG+AGG | 0.461704 | 8_4:-2339606 | None:intergenic |
| TTTGTTGGAACAAGGTGGTT+TGG | 0.474962 | 8_4:+2340314 | Msa1307100:CDS |
| TTTGATTGAAATGGGTTTGA+AGG | 0.475248 | 8_4:-2339476 | None:intergenic |
| AGGAAAGGGTTGTTGGTTTG+GGG | 0.479387 | 8_4:-2339400 | None:intergenic |
| TTTAGCTGGTGTTGAGAAGT+TGG | 0.479452 | 8_4:+2340581 | Msa1307100:CDS |
| CACCGCCGCGAACTGGGTGG+TGG | 0.479865 | 8_4:-2339776 | None:intergenic |
| AAATTTGGTTTGATCTATGC+TGG | 0.481214 | 8_4:+2340111 | Msa1307100:CDS |
| AGCTGGTGTTGAGAAGTTGG+TGG | 0.486689 | 8_4:+2340584 | Msa1307100:CDS |
| CCCAATCAGAGCTCTACAAC+TGG | 0.489103 | 8_4:+2339614 | Msa1307100:CDS |
| CTTAAGGGTCATAGGTCTGT+TGG | 0.490369 | 8_4:+2340525 | Msa1307100:CDS |
| GAAGGTGGGGTTGGTGCGGA+GGG | 0.492410 | 8_4:-2339458 | None:intergenic |
| GCCAGTTGTAGAGCTCTGAT+TGG | 0.492459 | 8_4:-2339615 | None:intergenic |
| CCAGTTGTAGAGCTCTGATT+GGG | 0.496920 | 8_4:-2339614 | None:intergenic |
| TGGTTCAGCTTAAGGGTCAT+AGG | 0.502181 | 8_4:+2340517 | Msa1307100:CDS |
| AACCAAACGTGATTTGGTCT+GGG | 0.503653 | 8_4:+2339893 | Msa1307100:CDS |
| GAAGACGCGATCTGAGGAAT+GGG | 0.509265 | 8_4:-2339542 | None:intergenic |
| TGAAACAGAACCCAGAAGCT+AGG | 0.510655 | 8_4:+2339956 | Msa1307100:CDS |
| ATTCCGAGGAGATATTCAAA+AGG | 0.512390 | 8_4:-2339726 | None:intergenic |
| GATTGAAATGGGTTTGAAGG+TGG | 0.515376 | 8_4:-2339473 | None:intergenic |
| AGGGAGGGTGGCGGGTCCAG+CGG | 0.519387 | 8_4:-2339572 | None:intergenic |
| ATTGAAATGGGTTTGAAGGT+GGG | 0.520166 | 8_4:-2339472 | None:intergenic |
| GGAGATTGTTGAGGTGAGTG+GGG | 0.521323 | 8_4:-2339437 | None:intergenic |
| GTTTATTAAGGAAGCTGCTA+AGG | 0.522507 | 8_4:+2340488 | Msa1307100:CDS |
| TGAAGACGCGATCTGAGGAA+TGG | 0.523874 | 8_4:-2339543 | None:intergenic |
| TTGAAATGGGTTTGAAGGTG+GGG | 0.530589 | 8_4:-2339471 | None:intergenic |
| TTTGAGGATTTGTTGGAACA+AGG | 0.531277 | 8_4:+2340306 | Msa1307100:CDS |
| ATCTTGTAATCAAGCATCAC+AGG | 0.547044 | 8_4:-2340216 | None:intergenic |
| AAGGGTCATAGGTCTGTTGG+TGG | 0.549936 | 8_4:+2340528 | Msa1307100:CDS |
| AACTTCTCAACACCAGCTAA+AGG | 0.551100 | 8_4:-2340579 | None:intergenic |
| TTCCGAGGAGATATTCAAAA+GGG | 0.554924 | 8_4:-2339725 | None:intergenic |
| AATGCTATTGATGAGAGTAA+TGG | 0.555480 | 8_4:+2340381 | Msa1307100:CDS |
| GGTGCGGAGGGAGATTGTTG+AGG | 0.560350 | 8_4:-2339446 | None:intergenic |
| CACATGTAAATCCCATAACA+AGG | 0.564444 | 8_4:-2340273 | None:intergenic |
| CATCTCCATGACGCTCATAC+CGG | 0.565793 | 8_4:-2339644 | None:intergenic |
| AGCGATAAAGCGGTGAAAGA+AGG | 0.567996 | 8_4:+2339856 | Msa1307100:CDS |
| TCAGATTTCTCCAAAGTGAA+AGG | 0.572475 | 8_4:-2340453 | None:intergenic |
| GGTTGTCATTGATGTTGCCA+TGG | 0.574103 | 8_4:-2339356 | None:intergenic |
| GTCCTGTTGAGAAATCTGTT+AGG | 0.577877 | 8_4:+2340415 | Msa1307100:CDS |
| GAAGTTGAAGACGCGATCTG+AGG | 0.578236 | 8_4:-2339548 | None:intergenic |
| ATCACAATTGTTACACCAGA+GGG | 0.581256 | 8_4:-2340153 | None:intergenic |
| TTGGAGAAATCTGAGTTGGA+AGG | 0.593451 | 8_4:+2340462 | Msa1307100:CDS |
| TGCTGGTGCTCAGAAGAATG+TGG | 0.593460 | 8_4:+2340128 | Msa1307100:CDS |
| TGTTATGGGATTTACATGTG+TGG | 0.603778 | 8_4:+2340276 | Msa1307100:CDS |
| GCTCTGATTGGGCTTTGAGG+AGG | 0.605568 | 8_4:-2339603 | None:intergenic |
| TCAGAGCTCTACAACTGGCG+TGG | 0.615515 | 8_4:+2339619 | Msa1307100:CDS |
| GAGGATTTGTTGGAACAAGG+TGG | 0.621045 | 8_4:+2340309 | Msa1307100:CDS |
| CGGTTCGTGGAGCGATAAAG+CGG | 0.626304 | 8_4:+2339846 | Msa1307100:CDS |
| CGCCACCACCCAGTTCGCGG+CGG | 0.633844 | 8_4:+2339774 | Msa1307100:CDS |
| GCTGGTGCTCAGAAGAATGT+GGG | 0.653676 | 8_4:+2340129 | Msa1307100:CDS |
| CATGTAAATCCCATAACAAG+GGG | 0.656059 | 8_4:-2340271 | None:intergenic |
| ACATGTAAATCCCATAACAA+GGG | 0.669416 | 8_4:-2340272 | None:intergenic |
| AATCACAATTGTTACACCAG+AGG | 0.695723 | 8_4:-2340154 | None:intergenic |
| GTCATGGAGATGAGTCACAG+AGG | 0.791298 | 8_4:+2339655 | Msa1307100:CDS |
| ATGTAAATCCCATAACAAGG+GGG | 0.794835 | 8_4:-2340270 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATCCCATTTTTATTACT+GGG | - | chr8_4:2340042-2340061 | None:intergenic | 20.0% |
| !!! | AAAATCCCATTTTTATTACT+GGG | - | chr8_4:2340042-2340061 | None:intergenic | 20.0% |
| ! | TGTTTCAATTCATCAAAAGA+TGG | - | chr8_4:2339943-2339962 | None:intergenic | 25.0% |
| !!! | CAAAATCCCATTTTTATTAC+TGG | - | chr8_4:2340043-2340062 | None:intergenic | 25.0% |
| !! | CAGTAATAAAAATGGGATTT+TGG | + | chr8_4:2340041-2340060 | Msa1307100:CDS | 25.0% |
| !! | TAATAAAAATGGGATTTTGG+TGG | + | chr8_4:2340044-2340063 | Msa1307100:CDS | 25.0% |
| ! | ATTGTGAGAAATGATTTGAT+TGG | + | chr8_4:2340174-2340193 | Msa1307100:CDS | 25.0% |
| ! | TGTTTCAATTCATCAAAAGA+TGG | - | chr8_4:2339943-2339962 | None:intergenic | 25.0% |
| !!! | CAAAATCCCATTTTTATTAC+TGG | - | chr8_4:2340043-2340062 | None:intergenic | 25.0% |
| !! | CAGTAATAAAAATGGGATTT+TGG | + | chr8_4:2340041-2340060 | Msa1307100:CDS | 25.0% |
| !! | TAATAAAAATGGGATTTTGG+TGG | + | chr8_4:2340044-2340063 | Msa1307100:CDS | 25.0% |
| ! | ATTGTGAGAAATGATTTGAT+TGG | + | chr8_4:2340174-2340193 | Msa1307100:CDS | 25.0% |
| ! | TTTGATTGAAATGGGTTTGA+AGG | - | chr8_4:2339479-2339498 | None:intergenic | 30.0% |
| ! | TGATTCAGCTTTTTGGATAA+TGG | - | chr8_4:2339695-2339714 | None:intergenic | 30.0% |
| ! | TATTCCGTTCTTTTTCTTCA+AGG | + | chr8_4:2339748-2339767 | Msa1307100:CDS | 30.0% |
| !! | TCGTTTTTGCAGATATTCAA+CGG | - | chr8_4:2339802-2339821 | None:intergenic | 30.0% |
| ATTGTAAACCAAACGTGATT+TGG | + | chr8_4:2339887-2339906 | Msa1307100:CDS | 30.0% | |
| TGTGCTAATGAAACAATTCA+TGG | + | chr8_4:2339991-2340010 | Msa1307100:CDS | 30.0% | |
| CAACACCCAGTAATAAAAAT+GGG | + | chr8_4:2340034-2340053 | Msa1307100:CDS | 30.0% | |
| !! | AAATTTGGTTTGATCTATGC+TGG | + | chr8_4:2340111-2340130 | Msa1307100:CDS | 30.0% |
| ACATGTAAATCCCATAACAA+GGG | - | chr8_4:2340275-2340294 | None:intergenic | 30.0% | |
| !!! | TTTGGTTTTTGAGGATTTGT+TGG | + | chr8_4:2340299-2340318 | Msa1307100:CDS | 30.0% |
| AATGCTATTGATGAGAGTAA+TGG | + | chr8_4:2340381-2340400 | Msa1307100:CDS | 30.0% | |
| ATGCTATTGATGAGAGTAAT+GGG | + | chr8_4:2340382-2340401 | Msa1307100:CDS | 30.0% | |
| ! | TTTGATTGAAATGGGTTTGA+AGG | - | chr8_4:2339479-2339498 | None:intergenic | 30.0% |
| ! | TGATTCAGCTTTTTGGATAA+TGG | - | chr8_4:2339695-2339714 | None:intergenic | 30.0% |
| ! | TATTCCGTTCTTTTTCTTCA+AGG | + | chr8_4:2339748-2339767 | Msa1307100:CDS | 30.0% |
| !! | TCGTTTTTGCAGATATTCAA+CGG | - | chr8_4:2339802-2339821 | None:intergenic | 30.0% |
| ATTGTAAACCAAACGTGATT+TGG | + | chr8_4:2339887-2339906 | Msa1307100:CDS | 30.0% | |
| TGTGCTAATGAAACAATTCA+TGG | + | chr8_4:2339991-2340010 | Msa1307100:CDS | 30.0% | |
| CAACACCCAGTAATAAAAAT+GGG | + | chr8_4:2340034-2340053 | Msa1307100:CDS | 30.0% | |
| !! | AAATTTGGTTTGATCTATGC+TGG | + | chr8_4:2340111-2340130 | Msa1307100:CDS | 30.0% |
| ACATGTAAATCCCATAACAA+GGG | - | chr8_4:2340275-2340294 | None:intergenic | 30.0% | |
| !!! | TTTGGTTTTTGAGGATTTGT+TGG | + | chr8_4:2340299-2340318 | Msa1307100:CDS | 30.0% |
| AATGCTATTGATGAGAGTAA+TGG | + | chr8_4:2340381-2340400 | Msa1307100:CDS | 30.0% | |
| ATGCTATTGATGAGAGTAAT+GGG | + | chr8_4:2340382-2340401 | Msa1307100:CDS | 30.0% | |
| !!! | TTTTTTGAGGAAAGGGTTGT+TGG | - | chr8_4:2339410-2339429 | None:intergenic | 35.0% |
| !!! | TGATGGGTTTTTTGAGGAAA+GGG | - | chr8_4:2339417-2339436 | None:intergenic | 35.0% |
| ! | ATTGAAATGGGTTTGAAGGT+GGG | - | chr8_4:2339475-2339494 | None:intergenic | 35.0% |
| ! | TACCCTTTTGAATATCTCCT+CGG | + | chr8_4:2339723-2339742 | Msa1307100:CDS | 35.0% |
| TTCCGAGGAGATATTCAAAA+GGG | - | chr8_4:2339728-2339747 | None:intergenic | 35.0% | |
| ATTCCGAGGAGATATTCAAA+AGG | - | chr8_4:2339729-2339748 | None:intergenic | 35.0% | |
| AAAAAGAACGGAATATTCCG+AGG | - | chr8_4:2339743-2339762 | None:intergenic | 35.0% | |
| TATGCAAAAACCTAGCTTCT+GGG | - | chr8_4:2339969-2339988 | None:intergenic | 35.0% | |
| ATATGCAAAAACCTAGCTTC+TGG | - | chr8_4:2339970-2339989 | None:intergenic | 35.0% | |
| !! | CCATTTTTATTACTGGGTGT+TGG | - | chr8_4:2340036-2340055 | None:intergenic | 35.0% |
| CCAACACCCAGTAATAAAAA+TGG | + | chr8_4:2340033-2340052 | Msa1307100:CDS | 35.0% | |
| TTTCGAAACATCAACAGGTT+TGG | - | chr8_4:2340094-2340113 | None:intergenic | 35.0% | |
| CCAAATTTCGAAACATCAAC+AGG | - | chr8_4:2340099-2340118 | None:intergenic | 35.0% | |
| CCTGTTGATGTTTCGAAATT+TGG | + | chr8_4:2340096-2340115 | Msa1307100:CDS | 35.0% | |
| ATCACAATTGTTACACCAGA+GGG | - | chr8_4:2340156-2340175 | None:intergenic | 35.0% | |
| AATCACAATTGTTACACCAG+AGG | - | chr8_4:2340157-2340176 | None:intergenic | 35.0% | |
| ATCTTGTAATCAAGCATCAC+AGG | - | chr8_4:2340219-2340238 | None:intergenic | 35.0% | |
| ATGTAAATCCCATAACAAGG+GGG | - | chr8_4:2340273-2340292 | None:intergenic | 35.0% | |
| CATGTAAATCCCATAACAAG+GGG | - | chr8_4:2340274-2340293 | None:intergenic | 35.0% | |
| CACATGTAAATCCCATAACA+AGG | - | chr8_4:2340276-2340295 | None:intergenic | 35.0% | |
| TGTTATGGGATTTACATGTG+TGG | + | chr8_4:2340276-2340295 | Msa1307100:CDS | 35.0% | |
| !! | TTTGAGGATTTGTTGGAACA+AGG | + | chr8_4:2340306-2340325 | Msa1307100:CDS | 35.0% |
| GATGAATGTTCCTTTCACTT+TGG | + | chr8_4:2340443-2340462 | Msa1307100:CDS | 35.0% | |
| TCAGATTTCTCCAAAGTGAA+AGG | - | chr8_4:2340456-2340475 | None:intergenic | 35.0% | |
| GTTGGAAGGTGAGTTTATTA+AGG | + | chr8_4:2340476-2340495 | Msa1307100:CDS | 35.0% | |
| GTTTATTAAGGAAGCTGCTA+AGG | + | chr8_4:2340488-2340507 | Msa1307100:CDS | 35.0% | |
| GAGAATATGGTTCAGCTTAA+GGG | + | chr8_4:2340510-2340529 | Msa1307100:CDS | 35.0% | |
| !!! | TTTTTTGAGGAAAGGGTTGT+TGG | - | chr8_4:2339410-2339429 | None:intergenic | 35.0% |
| !!! | TGATGGGTTTTTTGAGGAAA+GGG | - | chr8_4:2339417-2339436 | None:intergenic | 35.0% |
| ! | ATTGAAATGGGTTTGAAGGT+GGG | - | chr8_4:2339475-2339494 | None:intergenic | 35.0% |
| ! | TACCCTTTTGAATATCTCCT+CGG | + | chr8_4:2339723-2339742 | Msa1307100:CDS | 35.0% |
| TTCCGAGGAGATATTCAAAA+GGG | - | chr8_4:2339728-2339747 | None:intergenic | 35.0% | |
| ATTCCGAGGAGATATTCAAA+AGG | - | chr8_4:2339729-2339748 | None:intergenic | 35.0% | |
| AAAAAGAACGGAATATTCCG+AGG | - | chr8_4:2339743-2339762 | None:intergenic | 35.0% | |
| TATGCAAAAACCTAGCTTCT+GGG | - | chr8_4:2339969-2339988 | None:intergenic | 35.0% | |
| ATATGCAAAAACCTAGCTTC+TGG | - | chr8_4:2339970-2339989 | None:intergenic | 35.0% | |
| !! | CCATTTTTATTACTGGGTGT+TGG | - | chr8_4:2340036-2340055 | None:intergenic | 35.0% |
| CCAACACCCAGTAATAAAAA+TGG | + | chr8_4:2340033-2340052 | Msa1307100:CDS | 35.0% | |
| TTTCGAAACATCAACAGGTT+TGG | - | chr8_4:2340094-2340113 | None:intergenic | 35.0% | |
| CCAAATTTCGAAACATCAAC+AGG | - | chr8_4:2340099-2340118 | None:intergenic | 35.0% | |
| CCTGTTGATGTTTCGAAATT+TGG | + | chr8_4:2340096-2340115 | Msa1307100:CDS | 35.0% | |
| ATCACAATTGTTACACCAGA+GGG | - | chr8_4:2340156-2340175 | None:intergenic | 35.0% | |
| AATCACAATTGTTACACCAG+AGG | - | chr8_4:2340157-2340176 | None:intergenic | 35.0% | |
| ATCTTGTAATCAAGCATCAC+AGG | - | chr8_4:2340219-2340238 | None:intergenic | 35.0% | |
| ATGTAAATCCCATAACAAGG+GGG | - | chr8_4:2340273-2340292 | None:intergenic | 35.0% | |
| CATGTAAATCCCATAACAAG+GGG | - | chr8_4:2340274-2340293 | None:intergenic | 35.0% | |
| CACATGTAAATCCCATAACA+AGG | - | chr8_4:2340276-2340295 | None:intergenic | 35.0% | |
| TGTTATGGGATTTACATGTG+TGG | + | chr8_4:2340276-2340295 | Msa1307100:CDS | 35.0% | |
| !! | TTTGAGGATTTGTTGGAACA+AGG | + | chr8_4:2340306-2340325 | Msa1307100:CDS | 35.0% |
| GATGAATGTTCCTTTCACTT+TGG | + | chr8_4:2340443-2340462 | Msa1307100:CDS | 35.0% | |
| TCAGATTTCTCCAAAGTGAA+AGG | - | chr8_4:2340456-2340475 | None:intergenic | 35.0% | |
| GTTGGAAGGTGAGTTTATTA+AGG | + | chr8_4:2340476-2340495 | Msa1307100:CDS | 35.0% | |
| GTTTATTAAGGAAGCTGCTA+AGG | + | chr8_4:2340488-2340507 | Msa1307100:CDS | 35.0% | |
| GAGAATATGGTTCAGCTTAA+GGG | + | chr8_4:2340510-2340529 | Msa1307100:CDS | 35.0% | |
| !!! | GTGATGGGTTTTTTGAGGAA+AGG | - | chr8_4:2339418-2339437 | None:intergenic | 40.0% |
| ! | TTGAAATGGGTTTGAAGGTG+GGG | - | chr8_4:2339474-2339493 | None:intergenic | 40.0% |
| ! | GATTGAAATGGGTTTGAAGG+TGG | - | chr8_4:2339476-2339495 | None:intergenic | 40.0% |
| ! | GCGGAGCATTTGATTGAAAT+GGG | - | chr8_4:2339487-2339506 | None:intergenic | 40.0% |
| ! | GCAGATCTGATTCAGCTTTT+TGG | - | chr8_4:2339702-2339721 | None:intergenic | 40.0% |
| ! | TCCGTTCTTTTTCTTCAAGG+CGG | + | chr8_4:2339751-2339770 | Msa1307100:CDS | 40.0% |
| ! | GCTGTTGATTACATCGTTAC+CGG | + | chr8_4:2339826-2339845 | Msa1307100:CDS | 40.0% |
| !! | AAACCAAACGTGATTTGGTC+TGG | + | chr8_4:2339892-2339911 | Msa1307100:CDS | 40.0% |
| !! | AACCAAACGTGATTTGGTCT+GGG | + | chr8_4:2339893-2339912 | Msa1307100:CDS | 40.0% |
| TACAATACACCCCCTTGTTA+TGG | + | chr8_4:2340261-2340280 | Msa1307100:CDS | 40.0% | |
| ! | ACAATACACCCCCTTGTTAT+GGG | + | chr8_4:2340262-2340281 | Msa1307100:CDS | 40.0% |
| TGGGATTTACATGTGTGGTT+TGG | + | chr8_4:2340281-2340300 | Msa1307100:CDS | 40.0% | |
| !!! | CATGTGTGGTTTGGTTTTTG+AGG | + | chr8_4:2340290-2340309 | Msa1307100:CDS | 40.0% |
| TTTGTTGGAACAAGGTGGTT+TGG | + | chr8_4:2340314-2340333 | Msa1307100:CDS | 40.0% | |
| GTCCTGTTGAGAAATCTGTT+AGG | + | chr8_4:2340415-2340434 | Msa1307100:CDS | 40.0% | |
| GACCTAACAGATTTCTCAAC+AGG | - | chr8_4:2340420-2340439 | None:intergenic | 40.0% | |
| ! | CACTTTGGAGAAATCTGAGT+TGG | + | chr8_4:2340458-2340477 | Msa1307100:CDS | 40.0% |
| ! | TTGGAGAAATCTGAGTTGGA+AGG | + | chr8_4:2340462-2340481 | Msa1307100:CDS | 40.0% |
| GGAGAATATGGTTCAGCTTA+AGG | + | chr8_4:2340509-2340528 | Msa1307100:CDS | 40.0% | |
| TACAATGCTATGCCTTTAGC+TGG | + | chr8_4:2340567-2340586 | Msa1307100:CDS | 40.0% | |
| AACTTCTCAACACCAGCTAA+AGG | - | chr8_4:2340582-2340601 | None:intergenic | 40.0% | |
| ! | TTTAGCTGGTGTTGAGAAGT+TGG | + | chr8_4:2340581-2340600 | Msa1307100:CDS | 40.0% |
| !!! | GTGATGGGTTTTTTGAGGAA+AGG | - | chr8_4:2339418-2339437 | None:intergenic | 40.0% |
| ! | TTGAAATGGGTTTGAAGGTG+GGG | - | chr8_4:2339474-2339493 | None:intergenic | 40.0% |
| ! | GATTGAAATGGGTTTGAAGG+TGG | - | chr8_4:2339476-2339495 | None:intergenic | 40.0% |
| ! | GCGGAGCATTTGATTGAAAT+GGG | - | chr8_4:2339487-2339506 | None:intergenic | 40.0% |
| ! | GCAGATCTGATTCAGCTTTT+TGG | - | chr8_4:2339702-2339721 | None:intergenic | 40.0% |
| ! | TCCGTTCTTTTTCTTCAAGG+CGG | + | chr8_4:2339751-2339770 | Msa1307100:CDS | 40.0% |
| ! | GCTGTTGATTACATCGTTAC+CGG | + | chr8_4:2339826-2339845 | Msa1307100:CDS | 40.0% |
| !! | AAACCAAACGTGATTTGGTC+TGG | + | chr8_4:2339892-2339911 | Msa1307100:CDS | 40.0% |
| !! | AACCAAACGTGATTTGGTCT+GGG | + | chr8_4:2339893-2339912 | Msa1307100:CDS | 40.0% |
| TACAATACACCCCCTTGTTA+TGG | + | chr8_4:2340261-2340280 | Msa1307100:CDS | 40.0% | |
| ! | ACAATACACCCCCTTGTTAT+GGG | + | chr8_4:2340262-2340281 | Msa1307100:CDS | 40.0% |
| TGGGATTTACATGTGTGGTT+TGG | + | chr8_4:2340281-2340300 | Msa1307100:CDS | 40.0% | |
| !!! | CATGTGTGGTTTGGTTTTTG+AGG | + | chr8_4:2340290-2340309 | Msa1307100:CDS | 40.0% |
| TTTGTTGGAACAAGGTGGTT+TGG | + | chr8_4:2340314-2340333 | Msa1307100:CDS | 40.0% | |
| GTCCTGTTGAGAAATCTGTT+AGG | + | chr8_4:2340415-2340434 | Msa1307100:CDS | 40.0% | |
| GACCTAACAGATTTCTCAAC+AGG | - | chr8_4:2340420-2340439 | None:intergenic | 40.0% | |
| ! | CACTTTGGAGAAATCTGAGT+TGG | + | chr8_4:2340458-2340477 | Msa1307100:CDS | 40.0% |
| ! | TTGGAGAAATCTGAGTTGGA+AGG | + | chr8_4:2340462-2340481 | Msa1307100:CDS | 40.0% |
| GGAGAATATGGTTCAGCTTA+AGG | + | chr8_4:2340509-2340528 | Msa1307100:CDS | 40.0% | |
| TACAATGCTATGCCTTTAGC+TGG | + | chr8_4:2340567-2340586 | Msa1307100:CDS | 40.0% | |
| AACTTCTCAACACCAGCTAA+AGG | - | chr8_4:2340582-2340601 | None:intergenic | 40.0% | |
| ! | TTTAGCTGGTGTTGAGAAGT+TGG | + | chr8_4:2340581-2340600 | Msa1307100:CDS | 40.0% |
| !! | AGGAAAGGGTTGTTGGTTTG+GGG | - | chr8_4:2339403-2339422 | None:intergenic | 45.0% |
| !! | GAGGAAAGGGTTGTTGGTTT+GGG | - | chr8_4:2339404-2339423 | None:intergenic | 45.0% |
| ! | TGAGGAAAGGGTTGTTGGTT+TGG | - | chr8_4:2339405-2339424 | None:intergenic | 45.0% |
| ! | GGCGGAGCATTTGATTGAAA+TGG | - | chr8_4:2339488-2339507 | None:intergenic | 45.0% |
| ! | TGAGGAATGGGTTTGGGTTT+GGG | - | chr8_4:2339533-2339552 | None:intergenic | 45.0% |
| !! | CTTTGAGGAGGACGTTTTCA+GGG | - | chr8_4:2339594-2339613 | None:intergenic | 45.0% |
| ! | CCAGTTGTAGAGCTCTGATT+GGG | - | chr8_4:2339617-2339636 | None:intergenic | 45.0% |
| GCCGCCTTGAAGAAAAAGAA+CGG | - | chr8_4:2339755-2339774 | None:intergenic | 45.0% | |
| !! | ATTACATCGTTACCGGTTCG+TGG | + | chr8_4:2339833-2339852 | Msa1307100:CDS | 45.0% |
| AGCGATAAAGCGGTGAAAGA+AGG | + | chr8_4:2339856-2339875 | Msa1307100:CDS | 45.0% | |
| TTCCCAGACCAAATCACGTT+TGG | - | chr8_4:2339898-2339917 | None:intergenic | 45.0% | |
| TGAAACAGAACCCAGAAGCT+AGG | + | chr8_4:2339956-2339975 | Msa1307100:CDS | 45.0% | |
| !! | GAGGATTTGTTGGAACAAGG+TGG | + | chr8_4:2340309-2340328 | Msa1307100:CDS | 45.0% |
| GGAAGCTGCTAAGGAGAATA+TGG | + | chr8_4:2340497-2340516 | Msa1307100:CDS | 45.0% | |
| TGGTTCAGCTTAAGGGTCAT+AGG | + | chr8_4:2340517-2340536 | Msa1307100:CDS | 45.0% | |
| CTTAAGGGTCATAGGTCTGT+TGG | + | chr8_4:2340525-2340544 | Msa1307100:CDS | 45.0% | |
| !! | AGGAAAGGGTTGTTGGTTTG+GGG | - | chr8_4:2339403-2339422 | None:intergenic | 45.0% |
| !! | GAGGAAAGGGTTGTTGGTTT+GGG | - | chr8_4:2339404-2339423 | None:intergenic | 45.0% |
| ! | TGAGGAAAGGGTTGTTGGTT+TGG | - | chr8_4:2339405-2339424 | None:intergenic | 45.0% |
| ! | GGCGGAGCATTTGATTGAAA+TGG | - | chr8_4:2339488-2339507 | None:intergenic | 45.0% |
| ! | TGAGGAATGGGTTTGGGTTT+GGG | - | chr8_4:2339533-2339552 | None:intergenic | 45.0% |
| !! | CTTTGAGGAGGACGTTTTCA+GGG | - | chr8_4:2339594-2339613 | None:intergenic | 45.0% |
| ! | CCAGTTGTAGAGCTCTGATT+GGG | - | chr8_4:2339617-2339636 | None:intergenic | 45.0% |
| GCCGCCTTGAAGAAAAAGAA+CGG | - | chr8_4:2339755-2339774 | None:intergenic | 45.0% | |
| !! | ATTACATCGTTACCGGTTCG+TGG | + | chr8_4:2339833-2339852 | Msa1307100:CDS | 45.0% |
| AGCGATAAAGCGGTGAAAGA+AGG | + | chr8_4:2339856-2339875 | Msa1307100:CDS | 45.0% | |
| TTCCCAGACCAAATCACGTT+TGG | - | chr8_4:2339898-2339917 | None:intergenic | 45.0% | |
| TGAAACAGAACCCAGAAGCT+AGG | + | chr8_4:2339956-2339975 | Msa1307100:CDS | 45.0% | |
| !! | GAGGATTTGTTGGAACAAGG+TGG | + | chr8_4:2340309-2340328 | Msa1307100:CDS | 45.0% |
| GGAAGCTGCTAAGGAGAATA+TGG | + | chr8_4:2340497-2340516 | Msa1307100:CDS | 45.0% | |
| TGGTTCAGCTTAAGGGTCAT+AGG | + | chr8_4:2340517-2340536 | Msa1307100:CDS | 45.0% | |
| CTTAAGGGTCATAGGTCTGT+TGG | + | chr8_4:2340525-2340544 | Msa1307100:CDS | 45.0% | |
| !!! | GTGGGGTGATGGGTTTTTTG+AGG | - | chr8_4:2339423-2339442 | None:intergenic | 50.0% |
| GGAGATTGTTGAGGTGAGTG+GGG | - | chr8_4:2339440-2339459 | None:intergenic | 50.0% | |
| GGGAGATTGTTGAGGTGAGT+GGG | - | chr8_4:2339441-2339460 | None:intergenic | 50.0% | |
| AGGGAGATTGTTGAGGTGAG+TGG | - | chr8_4:2339442-2339461 | None:intergenic | 50.0% | |
| ! | AATGGGTTTGAAGGTGGGGT+TGG | - | chr8_4:2339470-2339489 | None:intergenic | 50.0% |
| ! | GAGGAATGGGTTTGGGTTTG+GGG | - | chr8_4:2339532-2339551 | None:intergenic | 50.0% |
| ! | CTGAGGAATGGGTTTGGGTT+TGG | - | chr8_4:2339534-2339553 | None:intergenic | 50.0% |
| ! | GCGATCTGAGGAATGGGTTT+GGG | - | chr8_4:2339539-2339558 | None:intergenic | 50.0% |
| GAAGACGCGATCTGAGGAAT+GGG | - | chr8_4:2339545-2339564 | None:intergenic | 50.0% | |
| TGAAGACGCGATCTGAGGAA+TGG | - | chr8_4:2339546-2339565 | None:intergenic | 50.0% | |
| GAAGTTGAAGACGCGATCTG+AGG | - | chr8_4:2339551-2339570 | None:intergenic | 50.0% | |
| !!! | GCTTTGAGGAGGACGTTTTC+AGG | - | chr8_4:2339595-2339614 | None:intergenic | 50.0% |
| ! | AGAGCTCTGATTGGGCTTTG+AGG | - | chr8_4:2339609-2339628 | None:intergenic | 50.0% |
| CCCAATCAGAGCTCTACAAC+TGG | + | chr8_4:2339614-2339633 | Msa1307100:CDS | 50.0% | |
| ! | GCCAGTTGTAGAGCTCTGAT+TGG | - | chr8_4:2339618-2339637 | None:intergenic | 50.0% |
| CATCTCCATGACGCTCATAC+CGG | - | chr8_4:2339647-2339666 | None:intergenic | 50.0% | |
| GTCATGGAGATGAGTCACAG+AGG | + | chr8_4:2339655-2339674 | Msa1307100:CDS | 50.0% | |
| TGCTGGTGCTCAGAAGAATG+TGG | + | chr8_4:2340128-2340147 | Msa1307100:CDS | 50.0% | |
| GCTGGTGCTCAGAAGAATGT+GGG | + | chr8_4:2340129-2340148 | Msa1307100:CDS | 50.0% | |
| !! | GGAACAAGGTGGTTTGGTTG+AGG | + | chr8_4:2340320-2340339 | Msa1307100:CDS | 50.0% |
| AAGGGTCATAGGTCTGTTGG+TGG | + | chr8_4:2340528-2340547 | Msa1307100:CDS | 50.0% | |
| ! | AGCTGGTGTTGAGAAGTTGG+TGG | + | chr8_4:2340584-2340603 | Msa1307100:CDS | 50.0% |
| !!! | GTGGGGTGATGGGTTTTTTG+AGG | - | chr8_4:2339423-2339442 | None:intergenic | 50.0% |
| GGAGATTGTTGAGGTGAGTG+GGG | - | chr8_4:2339440-2339459 | None:intergenic | 50.0% | |
| GGGAGATTGTTGAGGTGAGT+GGG | - | chr8_4:2339441-2339460 | None:intergenic | 50.0% | |
| AGGGAGATTGTTGAGGTGAG+TGG | - | chr8_4:2339442-2339461 | None:intergenic | 50.0% | |
| ! | AATGGGTTTGAAGGTGGGGT+TGG | - | chr8_4:2339470-2339489 | None:intergenic | 50.0% |
| ! | GAGGAATGGGTTTGGGTTTG+GGG | - | chr8_4:2339532-2339551 | None:intergenic | 50.0% |
| ! | CTGAGGAATGGGTTTGGGTT+TGG | - | chr8_4:2339534-2339553 | None:intergenic | 50.0% |
| ! | GCGATCTGAGGAATGGGTTT+GGG | - | chr8_4:2339539-2339558 | None:intergenic | 50.0% |
| GAAGACGCGATCTGAGGAAT+GGG | - | chr8_4:2339545-2339564 | None:intergenic | 50.0% | |
| TGAAGACGCGATCTGAGGAA+TGG | - | chr8_4:2339546-2339565 | None:intergenic | 50.0% | |
| GAAGTTGAAGACGCGATCTG+AGG | - | chr8_4:2339551-2339570 | None:intergenic | 50.0% | |
| !!! | GCTTTGAGGAGGACGTTTTC+AGG | - | chr8_4:2339595-2339614 | None:intergenic | 50.0% |
| ! | AGAGCTCTGATTGGGCTTTG+AGG | - | chr8_4:2339609-2339628 | None:intergenic | 50.0% |
| CCCAATCAGAGCTCTACAAC+TGG | + | chr8_4:2339614-2339633 | Msa1307100:CDS | 50.0% | |
| ! | GCCAGTTGTAGAGCTCTGAT+TGG | - | chr8_4:2339618-2339637 | None:intergenic | 50.0% |
| CATCTCCATGACGCTCATAC+CGG | - | chr8_4:2339647-2339666 | None:intergenic | 50.0% | |
| GTCATGGAGATGAGTCACAG+AGG | + | chr8_4:2339655-2339674 | Msa1307100:CDS | 50.0% | |
| TGCTGGTGCTCAGAAGAATG+TGG | + | chr8_4:2340128-2340147 | Msa1307100:CDS | 50.0% | |
| GCTGGTGCTCAGAAGAATGT+GGG | + | chr8_4:2340129-2340148 | Msa1307100:CDS | 50.0% | |
| !! | GGAACAAGGTGGTTTGGTTG+AGG | + | chr8_4:2340320-2340339 | Msa1307100:CDS | 50.0% |
| AAGGGTCATAGGTCTGTTGG+TGG | + | chr8_4:2340528-2340547 | Msa1307100:CDS | 50.0% | |
| ! | AGCTGGTGTTGAGAAGTTGG+TGG | + | chr8_4:2340584-2340603 | Msa1307100:CDS | 50.0% |
| ! | CAGGAGATGGGTTTGTGGTG+AGG | - | chr8_4:2339380-2339399 | None:intergenic | 55.0% |
| !! | GTTGGTTTGGGGCAGGAGAT+GGG | - | chr8_4:2339392-2339411 | None:intergenic | 55.0% |
| !! | TGTTGGTTTGGGGCAGGAGA+TGG | - | chr8_4:2339393-2339412 | None:intergenic | 55.0% |
| !! | AAGGGTTGTTGGTTTGGGGC+AGG | - | chr8_4:2339399-2339418 | None:intergenic | 55.0% |
| GTTGAGGTGAGTGGGGTGAT+GGG | - | chr8_4:2339433-2339452 | None:intergenic | 55.0% | |
| TGTTGAGGTGAGTGGGGTGA+TGG | - | chr8_4:2339434-2339453 | None:intergenic | 55.0% | |
| !! | GTTTGAAGGTGGGGTTGGTG+CGG | - | chr8_4:2339465-2339484 | None:intergenic | 55.0% |
| ! | ATGGGTTTGGGTTTGGGGCT+GGG | - | chr8_4:2339527-2339546 | None:intergenic | 55.0% |
| ! | AATGGGTTTGGGTTTGGGGC+TGG | - | chr8_4:2339528-2339547 | None:intergenic | 55.0% |
| ! | CGCGATCTGAGGAATGGGTT+TGG | - | chr8_4:2339540-2339559 | None:intergenic | 55.0% |
| !! | GAGGAGGACGTTTTCAGGGA+GGG | - | chr8_4:2339590-2339609 | None:intergenic | 55.0% |
| !! | TGAGGAGGACGTTTTCAGGG+AGG | - | chr8_4:2339591-2339610 | None:intergenic | 55.0% |
| !! | GCTCTGATTGGGCTTTGAGG+AGG | - | chr8_4:2339606-2339625 | None:intergenic | 55.0% |
| TCAGAGCTCTACAACTGGCG+TGG | + | chr8_4:2339619-2339638 | Msa1307100:CDS | 55.0% | |
| CTCTACAACTGGCGTGGATC+CGG | + | chr8_4:2339625-2339644 | Msa1307100:CDS | 55.0% | |
| TGGATCCGGTATGAGCGTCA+TGG | + | chr8_4:2339639-2339658 | Msa1307100:CDS | 55.0% | |
| CGCTTTATCGCTCCACGAAC+CGG | - | chr8_4:2339848-2339867 | None:intergenic | 55.0% | |
| CGGTTCGTGGAGCGATAAAG+CGG | + | chr8_4:2339846-2339865 | Msa1307100:CDS | 55.0% | |
| CAGAAGAATGTGGGTCCCTC+TGG | + | chr8_4:2340138-2340157 | Msa1307100:CDS | 55.0% | |
| ! | CAGGAGATGGGTTTGTGGTG+AGG | - | chr8_4:2339380-2339399 | None:intergenic | 55.0% |
| !! | GTTGGTTTGGGGCAGGAGAT+GGG | - | chr8_4:2339392-2339411 | None:intergenic | 55.0% |
| !! | TGTTGGTTTGGGGCAGGAGA+TGG | - | chr8_4:2339393-2339412 | None:intergenic | 55.0% |
| !! | AAGGGTTGTTGGTTTGGGGC+AGG | - | chr8_4:2339399-2339418 | None:intergenic | 55.0% |
| GTTGAGGTGAGTGGGGTGAT+GGG | - | chr8_4:2339433-2339452 | None:intergenic | 55.0% | |
| TGTTGAGGTGAGTGGGGTGA+TGG | - | chr8_4:2339434-2339453 | None:intergenic | 55.0% | |
| !! | GTTTGAAGGTGGGGTTGGTG+CGG | - | chr8_4:2339465-2339484 | None:intergenic | 55.0% |
| ! | ATGGGTTTGGGTTTGGGGCT+GGG | - | chr8_4:2339527-2339546 | None:intergenic | 55.0% |
| ! | AATGGGTTTGGGTTTGGGGC+TGG | - | chr8_4:2339528-2339547 | None:intergenic | 55.0% |
| ! | CGCGATCTGAGGAATGGGTT+TGG | - | chr8_4:2339540-2339559 | None:intergenic | 55.0% |
| !! | GAGGAGGACGTTTTCAGGGA+GGG | - | chr8_4:2339590-2339609 | None:intergenic | 55.0% |
| !! | TGAGGAGGACGTTTTCAGGG+AGG | - | chr8_4:2339591-2339610 | None:intergenic | 55.0% |
| !! | GCTCTGATTGGGCTTTGAGG+AGG | - | chr8_4:2339606-2339625 | None:intergenic | 55.0% |
| TCAGAGCTCTACAACTGGCG+TGG | + | chr8_4:2339619-2339638 | Msa1307100:CDS | 55.0% | |
| CTCTACAACTGGCGTGGATC+CGG | + | chr8_4:2339625-2339644 | Msa1307100:CDS | 55.0% | |
| TGGATCCGGTATGAGCGTCA+TGG | + | chr8_4:2339639-2339658 | Msa1307100:CDS | 55.0% | |
| CGCTTTATCGCTCCACGAAC+CGG | - | chr8_4:2339848-2339867 | None:intergenic | 55.0% | |
| CGGTTCGTGGAGCGATAAAG+CGG | + | chr8_4:2339846-2339865 | Msa1307100:CDS | 55.0% | |
| CAGAAGAATGTGGGTCCCTC+TGG | + | chr8_4:2340138-2340157 | Msa1307100:CDS | 55.0% | |
| ! | TGGGGCAGGAGATGGGTTTG+TGG | - | chr8_4:2339385-2339404 | None:intergenic | 60.0% |
| GGTGCGGAGGGAGATTGTTG+AGG | - | chr8_4:2339449-2339468 | None:intergenic | 60.0% | |
| TTGGGGCTGGGCTTGGGTTT+GGG | - | chr8_4:2339515-2339534 | None:intergenic | 60.0% | |
| ! | TTTGGGGCTGGGCTTGGGTT+TGG | - | chr8_4:2339516-2339535 | None:intergenic | 60.0% |
| ! | TTGGGTTTGGGGCTGGGCTT+GGG | - | chr8_4:2339521-2339540 | None:intergenic | 60.0% |
| ! | TTTGGGTTTGGGGCTGGGCT+TGG | - | chr8_4:2339522-2339541 | None:intergenic | 60.0% |
| !! | ACGTTTTCAGGGAGGGTGGC+GGG | - | chr8_4:2339583-2339602 | None:intergenic | 60.0% |
| !! | GACGTTTTCAGGGAGGGTGG+CGG | - | chr8_4:2339584-2339603 | None:intergenic | 60.0% |
| !! | GAGGACGTTTTCAGGGAGGG+TGG | - | chr8_4:2339587-2339606 | None:intergenic | 60.0% |
| ! | TGGGGCAGGAGATGGGTTTG+TGG | - | chr8_4:2339385-2339404 | None:intergenic | 60.0% |
| GGTGCGGAGGGAGATTGTTG+AGG | - | chr8_4:2339449-2339468 | None:intergenic | 60.0% | |
| TTGGGGCTGGGCTTGGGTTT+GGG | - | chr8_4:2339515-2339534 | None:intergenic | 60.0% | |
| ! | TTTGGGGCTGGGCTTGGGTT+TGG | - | chr8_4:2339516-2339535 | None:intergenic | 60.0% |
| ! | TTGGGTTTGGGGCTGGGCTT+GGG | - | chr8_4:2339521-2339540 | None:intergenic | 60.0% |
| ! | TTTGGGTTTGGGGCTGGGCT+TGG | - | chr8_4:2339522-2339541 | None:intergenic | 60.0% |
| !! | ACGTTTTCAGGGAGGGTGGC+GGG | - | chr8_4:2339583-2339602 | None:intergenic | 60.0% |
| !! | GACGTTTTCAGGGAGGGTGG+CGG | - | chr8_4:2339584-2339603 | None:intergenic | 60.0% |
| !! | GAGGACGTTTTCAGGGAGGG+TGG | - | chr8_4:2339587-2339606 | None:intergenic | 60.0% |
| !! | GAAGGTGGGGTTGGTGCGGA+GGG | - | chr8_4:2339461-2339480 | None:intergenic | 65.0% |
| !! | TGAAGGTGGGGTTGGTGCGG+AGG | - | chr8_4:2339462-2339481 | None:intergenic | 65.0% |
| ! | GGCTTGGGTTTGGGTGGTGG+CGG | - | chr8_4:2339506-2339525 | None:intergenic | 65.0% |
| CTGGGCTTGGGTTTGGGTGG+TGG | - | chr8_4:2339509-2339528 | None:intergenic | 65.0% | |
| CGCGTCTTCAACTTCGCCGC+TGG | + | chr8_4:2339556-2339575 | Msa1307100:CDS | 65.0% | |
| !! | GAAGGTGGGGTTGGTGCGGA+GGG | - | chr8_4:2339461-2339480 | None:intergenic | 65.0% |
| !! | TGAAGGTGGGGTTGGTGCGG+AGG | - | chr8_4:2339462-2339481 | None:intergenic | 65.0% |
| ! | GGCTTGGGTTTGGGTGGTGG+CGG | - | chr8_4:2339506-2339525 | None:intergenic | 65.0% |
| CTGGGCTTGGGTTTGGGTGG+TGG | - | chr8_4:2339509-2339528 | None:intergenic | 65.0% | |
| CGCGTCTTCAACTTCGCCGC+TGG | + | chr8_4:2339556-2339575 | Msa1307100:CDS | 65.0% | |
| GGGCTGGGCTTGGGTTTGGG+TGG | - | chr8_4:2339512-2339531 | None:intergenic | 70.0% | |
| CAACGGCACCGCCGCGAACT+GGG | - | chr8_4:2339785-2339804 | None:intergenic | 70.0% | |
| TCAACGGCACCGCCGCGAAC+TGG | - | chr8_4:2339786-2339805 | None:intergenic | 70.0% | |
| GGGCTGGGCTTGGGTTTGGG+TGG | - | chr8_4:2339512-2339531 | None:intergenic | 70.0% | |
| CAACGGCACCGCCGCGAACT+GGG | - | chr8_4:2339785-2339804 | None:intergenic | 70.0% | |
| TCAACGGCACCGCCGCGAAC+TGG | - | chr8_4:2339786-2339805 | None:intergenic | 70.0% | |
| !! | AGGGAGGGTGGCGGGTCCAG+CGG | - | chr8_4:2339575-2339594 | None:intergenic | 75.0% |
| CGGCGCCACCACCCAGTTCG+CGG | + | chr8_4:2339771-2339790 | Msa1307100:CDS | 75.0% | |
| CGCCACCACCCAGTTCGCGG+CGG | + | chr8_4:2339774-2339793 | Msa1307100:CDS | 75.0% | |
| CACCGCCGCGAACTGGGTGG+TGG | - | chr8_4:2339779-2339798 | None:intergenic | 75.0% | |
| !! | AGGGAGGGTGGCGGGTCCAG+CGG | - | chr8_4:2339575-2339594 | None:intergenic | 75.0% |
| CGGCGCCACCACCCAGTTCG+CGG | + | chr8_4:2339771-2339790 | Msa1307100:CDS | 75.0% | |
| CGCCACCACCCAGTTCGCGG+CGG | + | chr8_4:2339774-2339793 | Msa1307100:CDS | 75.0% | |
| CACCGCCGCGAACTGGGTGG+TGG | - | chr8_4:2339779-2339798 | None:intergenic | 75.0% | |
| ! | CGGCACCGCCGCGAACTGGG+TGG | - | chr8_4:2339782-2339801 | None:intergenic | 80.0% |
| ! | CGGCACCGCCGCGAACTGGG+TGG | - | chr8_4:2339782-2339801 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 2339358 | 2340641 | 2339358 | ID=Msa1307100;Name=Msa1307100 |
| chr8_4 | mRNA | 2339358 | 2340641 | 2339358 | ID=Msa1307100-mRNA-1;Parent=Msa1307100;Name=Msa1307100-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|427 |
| chr8_4 | exon | 2339358 | 2340641 | 2339358 | ID=Msa1307100-mRNA-1:exon:740;Parent=Msa1307100-mRNA-1 |
| chr8_4 | CDS | 2339358 | 2340641 | 2339358 | ID=Msa1307100-mRNA-1:cds;Parent=Msa1307100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
